Lsi01G002840 (gene) Bottle gourd (USVL1VR-Ls) v1

Overview
NameLsi01G002840
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Locationchr01: 2522134 .. 2524521 (-)
RNA-Seq ExpressionLsi01G002840
SyntenyLsi01G002840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAAGTGAATTTCTTTCAATTAAAAAGATGTTTCAGAGGGGGCTTAAATTGATTTAAACTAAGTAATATAGGTTATTCTATTGAATGTTTTCCTTTTGAATCAGGACCCAAGATATGGAAAAACCTCAAAAAGAAGAAGAGTAAGTGAATTTCTTTCAATTAAAGACATGTTTCAGACCAGCTTAAGTTGATTTAAACTAAGTAATATATGCTATTCTATTGAATGTTTTCCTTTTGAATCAGGACTCAAAATATGGAAAAATCTCAAAAAGAAGAAAAGTAAGTAGATTTCTTTCAATTAGAGGCATATTTCAAACCGGCTTAAATTGATTTAAATTAAGTAATATATGTTATTCTATTTAATGTTTTCCTTTTGAATTAGGACCCAAGATATGGAAAAACCTCAAGAAGAAGAAGAGTAAGTGAATTTCTTTCAATTAATGGCACGTTTCAAATAGACTTGAATTGATTTAAACTAAGTAATATATGCTATTCTATCAAATAGTTTCCTTTTGAATCAAGACCCAAGATATGAAAAAATCTCAAAAAGAAGAAGAGTAAGTGAATTTCTTTCGAATAATGGCACGTTTCAAACTGGCTTAAATTGATTTAAACTAAGTAACATATGCTATTCTATTGAATGTTTTCTTTTGTGTCAGGATTCAATATATGGAAAAACCTCAAAAAGAAGAAGAGTAAGTGAATTTTTTTCAATTAAAGACATGTTTCAAACCGGTTTAAATTGATTTAAATTAAGTAATAGATGCTATTTTATTAATTTTTTCCTTTTGAATCAGGATCCAAAATATGGAAAAATCTCAAGAAGAAGAAAAGTAAGTGAATTTCTTTTCATTAAAAGCACATTTCAAAGAGTTCAAATTGATTTTAATTAAATAATATATGTTATTATATTGAATGTTTTTTTTTTTTTGGAATTAGGATCGAAGATATGACAAATTCTGAAATAAAGAAATTCGGCGAGAGCTGCGCCTTTGGCATCTTTCTTACCCTTCTTTTTATGTGTGGTCTACTTGGATTATCGAATCGCACGAAAATAACTGTTCTTAGTTTTGAGGTATATATATATGTGGACATTTTTCAAATATAGAAAAGTGAGTCAAACTATTTACAAATATAGAAAAATTTTATCGATTTTATCGCTTTCTATCGCTCAAATGATAGAATTTATTTGTTTGAGCGATAGAAAGCGATAGAATTCTATCACCGATAGAAAGTGAAATTTTTCTATATTTGTAAATAGTTTGATATTTTCTATGTTCATAGTAATATATATATATATATATATATATATATATTATTTGCTATTCTAATATTGTATCAATATCAATATCAATCTCATTTGAACTGAATGTTTTATTTATCCATCTACTATAGCTTGTTTGCAAAACCACAAATGCCCATAAATTACAACAGGCCTTTGAAAATATTGATACATCATCATCCCAAAATAAATCATCAGGTTTTGATTTCCATTTTAATTATTCTGTCTTTTCATATCTTATAACAACATTATCTACATTTATTAATTAATTACTTTTTTACATTTATCAATTTTCTCCATTATTTAGGCATTGCAACCTATTTGCTCCAACCTTCTACACAGAATTTATATTTCTCCGCAAGAACATCAGTAAGTTAATGTTATTTAATTATTTCTTAATCATTATTATTATTATTTAAATTTTGGTGTTGTTAGTCACATTTGAATTCTTCGTGTAGATAAAGAAAGCTTTATCAAAGAAGTGGTATGTCTATTATGAAAATTTAGCTACCCAAGCAACTTGTGAATTTTTCCAAATGAATTTAAAGGGTAGTGCAAACAATACCCTCCGAGATGATCAGGGACTTGAAAGCAATATGCAATATATCGTGGTAAGTATATAATTTTCTCTAAATTTTTTTAACAATGCATGAATATATTAATTATTTAAAATTTATTGATTCCAAACAGGTAAAGTCATTAGTTGCAGTAGAAGGAGAGATTTATAACATTCCAAATATCAAGAGGTTCGAAGATGTCATTAGATCTTTGCGTGCTATCACATTCATTTCTTATAAACAATTATTGGTTAGTAGACTACGATCAAAATTGATCATTTATTTTACTTTTTTGGCTTTCTGTATATATATAATTTTTTATTTTTCAAATTATATATATATATATATATATATATTAATTGTTGTAAATGTTTGCAGGTTGGAGATCTATTTTGGAGTCACCCACTCAATAAAATTACAGAGATTCCATCATTAGATTTAATTGTTTACCCTAACTCGAACTACAACTGTATCCAACAATCTTGACTACCAATTGATGGCCACAAGTCAAAGTCAACAAGCAAGTTTAATAATGTCAACTCAAT

mRNA sequence

ATGAGACCCAAGATATGGAAAAACCTCAAAAAGAAGAAGAGTAAGACTCAAAATATGGAAAAATCTCAAAAAGAAGAAAAGACCCAAGATATGGAAAAACCTCAAGAAGAAGAAGAGATCCAAAATATGGAAAAATCTCAAGAAGAAGAAAAGATCGAAGATATGACAAATTCTGAAATAAAGAAATTCGGCGAGAGCTGCGCCTTTGGCATCTTTCTTACCCTTCTTTTTATGCATTGCAACCTATTTGCTCCAACCTTCTACACAGAATTTATATTTCTCCGCAAGAACATCAATAAAGAAAGCTTTATCAAAGAAGTGGGTAGTGCAAACAATACCCTCCGAGATGATCAGGGACTTGAAAGCAATATGCAATATATCGTGGTAAAGTCATTAGTTGCAGTAGAAGGAGAGATTTATAACATTCCAAATATCAAGAGGTTCGAAGATGTTGGAGATCTATTTTGGAGTCACCCACTCAATAAAATTACAGAGATTCCATCATTAGATTTAATTGTTTACCCTAACTCGAACTACAACTGTATCCAACAATCTTGACTACCAATTGATGGCCACAAGTCAAAGTCAACAAGCAAGTTTAATAATGTCAACTCAAT

Coding sequence (CDS)

ATGAGACCCAAGATATGGAAAAACCTCAAAAAGAAGAAGAGTAAGACTCAAAATATGGAAAAATCTCAAAAAGAAGAAAAGACCCAAGATATGGAAAAACCTCAAGAAGAAGAAGAGATCCAAAATATGGAAAAATCTCAAGAAGAAGAAAAGATCGAAGATATGACAAATTCTGAAATAAAGAAATTCGGCGAGAGCTGCGCCTTTGGCATCTTTCTTACCCTTCTTTTTATGCATTGCAACCTATTTGCTCCAACCTTCTACACAGAATTTATATTTCTCCGCAAGAACATCAATAAAGAAAGCTTTATCAAAGAAGTGGGTAGTGCAAACAATACCCTCCGAGATGATCAGGGACTTGAAAGCAATATGCAATATATCGTGGTAAAGTCATTAGTTGCAGTAGAAGGAGAGATTTATAACATTCCAAATATCAAGAGGTTCGAAGATGTTGGAGATCTATTTTGGAGTCACCCACTCAATAAAATTACAGAGATTCCATCATTAGATTTAATTGTTTACCCTAACTCGAACTACAACTGTATCCAACAATCTTGA

Protein sequence

MRPKIWKNLKKKKSKTQNMEKSQKEEKTQDMEKPQEEEEIQNMEKSQEEEKIEDMTNSEIKKFGESCAFGIFLTLLFMHCNLFAPTFYTEFIFLRKNINKESFIKEVGSANNTLRDDQGLESNMQYIVVKSLVAVEGEIYNIPNIKRFEDVGDLFWSHPLNKITEIPSLDLIVYPNSNYNCIQQS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (USVL1VR-Ls) v1
Date Performed: 2021-10-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 33..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 13..54

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi01G002840.1Lsi01G002840.1mRNA