Homology
BLAST of Lsi01G001210 vs. ExPASy Swiss-Prot
Match:
Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)
HSP 1 Score: 283.9 bits (725), Expect = 6.0e-75
Identity = 177/625 (28.32%), Postives = 317/625 (50.72%), Query Frame = 0
Query: 220 LRSQEDERIALRFFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQL 279
LRSQ D+ ALR F A + + + ++Y +L L ++ K++L M ++
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 280 WPEAFGFVMVSYSRAGRLRDAMKVLT-LMQRAGVEPNLSICNTAIHILVVGNELKKALRF 339
F ++ SY++ + + V+ ++ G++P+ N +++LV GN LK
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 340 AERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVM-GFLC 399
+M + GI P+V T+N LIK C HQ+ A+ +++ MP G PD+ ++ TVM G++
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 400 RDKRVNEIRELMKKMRTDSNLLPDHVTYNSLIQMLSKHGHGDEALEILRE-AEELRFKVD 459
+R +++ + +V+ N ++ K G ++AL ++E + + F D
Sbjct: 237 EGDLDGALR--IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 296
Query: 460 KVEYSAIVHAYCKEGNIKKAKELVGEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQ 519
+ ++ +V+ CK G++K A E++ M +G DPDV TY SV+ G C++G++ +A +++
Sbjct: 297 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 356
Query: 520 QMYKHHCKPNAVTYTTLLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREG 579
QM C PN VTY TL++ LC+ + EA ++ + + P+ T++ ++ GL
Sbjct: 357 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 416
Query: 580 KLNEACDVVREMIGKGFFPNPVEINLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFT 639
A ++ EM KG P+ N+LI SLC GK EA +LK+ GCA +V+ +
Sbjct: 417 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 476
Query: 640 TVIHGFCQKDDLEAALSLLDDMYLCNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQ 699
T+I GFC+ + A + D+M + +SVTY TLID L K+ R+E+A +L +M+ +
Sbjct: 477 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 536
Query: 700 GLVPSPVTYRSVIHQYCQKGRVEDLLKLLKKMLSKSRFQ--TAYNLVIEKLCKFGYLEEA 759
G P TY S++ +C+ G ++ +++ M S Y +I LCK G +E A
Sbjct: 537 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 596
Query: 760 NSLLSEVLRTASRTDAKTCHVLMESYLSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKR 819
+ LL + + +++ A + M +N P + ++ R
Sbjct: 597 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 656
Query: 820 LLVE--GKLEEADRLVLRFVERGYV 838
L G + EA ++ +E+G+V
Sbjct: 657 GLCNGGGPIREAVDFLVELLEKGFV 679
BLAST of Lsi01G001210 vs. ExPASy Swiss-Prot
Match:
Q9FIX3 (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX=3702 GN=EMB2745 PE=2 SV=1)
HSP 1 Score: 276.9 bits (707), Expect = 7.4e-73
Identity = 167/537 (31.10%), Postives = 282/537 (52.51%), Query Frame = 0
Query: 246 SSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGR-LRDAMKVL 305
SSV+ ++++ S+ L A ++ L G ++ V+ + R+ R + A V
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 306 TLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNV 365
M + V PN+ N I + AL ++M G PNVVTYN LI GYC +
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 366 HQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLPDHVT 425
++D +L+ M KG P+ +SY V+ LCR+ R+ E+ ++ +M L D VT
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL-DEVT 313
Query: 426 YNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNIKKAKELVGEMF 485
YN+LI+ K G+ +AL + E + Y++++H+ CK GN+ +A E + +M
Sbjct: 314 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 373
Query: 486 SKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRNGKSL 545
+G P+ TYT+++DGF + G +++A +++++M + P+ VTY L+NG C GK
Sbjct: 374 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 433
Query: 546 EARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLI 605
+A ++ +E+ +P+ ++YS V+ G R ++EA V REM+ KG P+ + + LI
Sbjct: 434 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 493
Query: 606 QSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKH 665
Q C + EA L +E + G + +T +I+ +C + DLE AL L ++M
Sbjct: 494 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 553
Query: 666 PDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYR---------------SVI 725
PD VTY+ LI+ L K R EA L +K+ + VPS VTY S+I
Sbjct: 554 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 613
Query: 726 HQYCQKGRVEDLLKLLKKMLSKSRFQ--TAYNLVIEKLCKFGYLEEANSLLSEVLRT 765
+C KG + + ++ + ML K+ TAYN++I C+ G + +A +L E++++
Sbjct: 614 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
BLAST of Lsi01G001210 vs. ExPASy Swiss-Prot
Match:
Q9SR00 (Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g04760 PE=2 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 1.3e-72
Identity = 149/473 (31.50%), Postives = 258/473 (54.55%), Query Frame = 0
Query: 293 RAGRLRDAMKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVV 352
R+G +++ +L M R G P++ +C I + KA+R E + G P+V
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 160
Query: 353 TYNCLIKGYCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKM 412
YN LI G+C ++++D A ++D+M K SPD V+Y ++G LC +++ +++ ++
Sbjct: 161 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 220
Query: 413 RTDSNLLPDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGN 472
+D N P +TY LI+ G DEAL+++ E K D Y+ I+ CKEG
Sbjct: 221 LSD-NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 280
Query: 473 IKKAKELVGEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTT 532
+ +A E+V + KGC+PDV++Y +L GK ++ +K+M +M+ C PN VTY+
Sbjct: 281 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 340
Query: 533 LLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKG 592
L+ LCR+GK EA ++ + +E+ TP+A +Y ++ REG+L+ A + + MI G
Sbjct: 341 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 400
Query: 593 FFPNPVEINLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAAL 652
P+ V N ++ +LC++GK +A ++ + GC+ N ++ T+ D AL
Sbjct: 401 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 460
Query: 653 SLLDDMYLCNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQY 712
++ +M PD +TY ++I L + G ++EA EL + M PS VTY V+ +
Sbjct: 461 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 520
Query: 713 CQKGRVEDLLKLLKKMLSKS--RFQTAYNLVIEKLCKFGYLEEANSLLSEVLR 764
C+ R+ED + +L+ M+ +T Y ++IE + GY EA L ++++R
Sbjct: 521 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
BLAST of Lsi01G001210 vs. ExPASy Swiss-Prot
Match:
Q9FMF6 (Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g64320 PE=2 SV=1)
HSP 1 Score: 273.5 bits (698), Expect = 8.2e-72
Identity = 157/536 (29.29%), Postives = 288/536 (53.73%), Query Frame = 0
Query: 249 YLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDAMKVLTLMQ 308
Y V+LEIL + A V M R I FG VM ++ + A+ +L M
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 309 RAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVD 368
+ G PN I T IH L N + +AL+ E M L+G P+ T+N +I G C +++
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 369 QAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLPDHVTYNSL 428
+A +++++M +G +PD ++Y +M LC+ RV+ ++L ++ P+ V +N+L
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PEIVIFNTL 364
Query: 429 IQMLSKHGHGDEALEILRE-AEELRFKVDKVEYSAIVHAYCKEGNIKKAKELVGEMFSKG 488
I HG D+A +L + D Y+++++ Y KEG + A E++ +M +KG
Sbjct: 365 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 424
Query: 489 CDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRNGKSLEAR 548
C P+V +YT ++DGFC++GK+D+A ++ +M KPN V + L++ C+ + EA
Sbjct: 425 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 484
Query: 549 KMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLIQSL 608
++ + P+ T++ ++ GL ++ A ++R+MI +G N V N LI +
Sbjct: 485 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 544
Query: 609 CRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDS 668
R G+ EA +L+ E + +G ++ + + ++I G C+ +++ A SL + M P +
Sbjct: 545 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 604
Query: 669 VTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQYCQKGRVEDLLKLLKK 728
++ LI+ L ++G +EEA E +M+ +G P VT+ S+I+ C+ GR+ED L + +K
Sbjct: 605 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 664
Query: 729 MLSKS--RFQTAYNLVIEKLCKFGYLEEANSLLSEVLRTASRTDAKTCHVLMESYL 782
+ ++ +N ++ LCK G++ +A LL E + + +T +L++S +
Sbjct: 665 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
BLAST of Lsi01G001210 vs. ExPASy Swiss-Prot
Match:
Q3EDF8 (Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX=3702 GN=At1g09900 PE=2 SV=1)
HSP 1 Score: 266.5 bits (680), Expect = 1.0e-69
Identity = 139/471 (29.51%), Postives = 259/471 (54.99%), Query Frame = 0
Query: 293 RAGRLRDAMKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVV 352
R G L + K L M G P++ C T I + +KA + E + G P+V+
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 353 TYNCLIKGYCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKM 412
TYN +I GYC +++ A+ ++D+M SPD V+Y T++ LC ++ + E++ +M
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 233
Query: 413 RTDSNLLPDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGN 472
+ PD +TY LI+ + A+++L E + D V Y+ +V+ CKEG
Sbjct: 234 -LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGR 293
Query: 473 IKKAKELVGEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTT 532
+ +A + + +M S GC P+V+T+ +L C G+ A+K++ M + P+ VT+
Sbjct: 294 LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNI 353
Query: 533 LLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKG 592
L+N LCR G A ++ + PN+++Y+ ++HG +E K++ A + + M+ +G
Sbjct: 354 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 413
Query: 593 FFPNPVEINLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAAL 652
+P+ V N ++ +LC+DGK +A ++L + +KGC+ ++ + TVI G + A+
Sbjct: 414 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 473
Query: 653 SLLDDMYLCNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQY 712
LLD+M + PD++TY++L+ L++ G+++EA + + R G+ P+ VT+ S++
Sbjct: 474 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 533
Query: 713 CQKGRVEDLLKLLKKMLSK--SRFQTAYNLVIEKLCKFGYLEEANSLLSEV 762
C+ + + + L M+++ +T+Y ++IE L G +EA LL+E+
Sbjct: 534 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNEL 580
BLAST of Lsi01G001210 vs. ExPASy TrEMBL
Match:
A0A0A0KI72 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524630 PE=4 SV=1)
HSP 1 Score: 1565.8 bits (4053), Expect = 0.0e+00
Identity = 775/847 (91.50%), Postives = 810/847 (95.63%), Query Frame = 0
Query: 1 MLFIFNHYYRIGRKQIRFYELNDLNKFQKGSANSAFVLNGFIFKCFDHFCLHPLACTELG 60
MLFI N Y++ GRKQIRF+ELN LNKFQ+G ANS FVLNG ++KCFDHFCLHPLACTE G
Sbjct: 1 MLFIINFYFKFGRKQIRFHELNYLNKFQRGVANSDFVLNGVVYKCFDHFCLHPLACTEFG 60
Query: 61 AFFSSSSWRDSSFSRSLRTYCTDIYGRNNGFDAAIDGFQKTDLEDSGDSSFFGSPNEEHE 120
AFFSSSSWRDSSF RSLRTYCTDIYGRNNG DAA D FQKTDLED+GDSSFFGSP+EEH
Sbjct: 61 AFFSSSSWRDSSFGRSLRTYCTDIYGRNNGSDAANDEFQKTDLEDTGDSSFFGSPSEEHG 120
Query: 121 KVQHFRFGDDIEDEESNEEEEEDEDLGDAADLLGSNLSNRNHGQGNDFKRVEIGEDIFRY 180
K +HF+FGDDIE EESN+EEEED DLGDAADLLGSNLSNR+ GQGND K+VEIGED+FR+
Sbjct: 121 KERHFKFGDDIEAEESNDEEEEDGDLGDAADLLGSNLSNRDPGQGNDCKKVEIGEDVFRH 180
Query: 181 PLVRDTCKLIKLSSSWNRKFEGELRYLVRSLNPLQVCAVLRSQEDERIALRFFYWADRLW 240
LVRDTCKLI+LSSSWNRKFEGELRYLVRSLNPLQVCAVL SQEDER ALRFFYWADRLW
Sbjct: 181 SLVRDTCKLIQLSSSWNRKFEGELRYLVRSLNPLQVCAVLLSQEDERNALRFFYWADRLW 240
Query: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
RYRHDSSVYLVMLEILSKTKLCQGAKR+LRLMTRR IQL PEAFGFVMVSYSRAGRLRDA
Sbjct: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDA 300
Query: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
MKVLTLMQ+AGVEPNLSICNTAIHILV+GNELKKALRFAERMVLIGIAPNVVTYNCLIKG
Sbjct: 301 MKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
Query: 361 YCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLP 420
YCNVHQVDQAMELIDQMP KGCSPDKVSYYTVMG LCRDKR+NEIREL+KKM+TDS LLP
Sbjct: 361 YCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLP 420
Query: 421 DHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNIKKAKELV 480
DHVTYNSLIQMLSKHGHGDEALEIL+EAE+LRFKVDKVEYSAIVHAYCKEG I+KAKELV
Sbjct: 421 DHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELV 480
Query: 481 GEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
EMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTT LNGLCRN
Sbjct: 481 SEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRN 540
Query: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI
Sbjct: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
Query: 601 NLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
NLL+ SLCRDGKP EANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL
Sbjct: 601 NLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
Query: 661 CNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQYCQKGRVED 720
CNKHPD+VTYT LIDALAKT R+EEATELTMKMLRQGLVPSPVTYRSVIHQYC+KGRVED
Sbjct: 661 CNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVED 720
Query: 721 LLKLLKKMLSKSRFQTAYNLVIEKLCKFGYLEEANSLLSEVLRTASRTDAKTCHVLMESY 780
LLKLLKKML KSRFQTAYNLVIEKLCKFGYLEEANSLL EVLRTASRTDAKTCHVLMESY
Sbjct: 721 LLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESY 780
Query: 781 LSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLVEGKLEEADRLVLRFVERGYVSAQ 840
L+VGIPMSAYKVACRMFNRNL+PDLKLCEKVSKRL+VEGKLEEADRLVLRFVERG+VSAQ
Sbjct: 781 LNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERGHVSAQ 840
Query: 841 DKKHLQD 848
+ KHL +
Sbjct: 841 EPKHLHN 847
BLAST of Lsi01G001210 vs. ExPASy TrEMBL
Match:
A0A5D3CSD4 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G009280 PE=4 SV=1)
HSP 1 Score: 1563.1 bits (4046), Expect = 0.0e+00
Identity = 770/847 (90.91%), Postives = 811/847 (95.75%), Query Frame = 0
Query: 1 MLFIFNHYYRIGRKQIRFYELNDLNKFQKGSANSAFVLNGFIFKCFDHFCLHPLACTELG 60
MLFI N Y++IGR+QIRF+ELN NKF+KG ANS FVLNG +++CF HFCLHPLACTELG
Sbjct: 1 MLFILNFYFKIGRRQIRFHELNYPNKFKKGGANSDFVLNGVVYQCFGHFCLHPLACTELG 60
Query: 61 AFFSSSSWRDSSFSRSLRTYCTDIYGRNNGFDAAIDGFQKTDLEDSGDSSFFGSPNEEHE 120
AFFSSSSWRDSSF RSLRTYCTDIYGRNN DAA D FQKTDLED+GDSS FG+P+EEH
Sbjct: 61 AFFSSSSWRDSSFGRSLRTYCTDIYGRNNASDAANDEFQKTDLEDTGDSSLFGNPSEEHG 120
Query: 121 KVQHFRFGDDIEDEESNEEEEEDEDLGDAADLLGSNLSNRNHGQGNDFKRVEIGEDIFRY 180
K +HF+FGDDIE EESN+EEEED DLGDAADLLGSNLSNRNHG+GNDFK+VEIGED+ R+
Sbjct: 121 KERHFKFGDDIEAEESNDEEEEDGDLGDAADLLGSNLSNRNHGRGNDFKKVEIGEDVLRH 180
Query: 181 PLVRDTCKLIKLSSSWNRKFEGELRYLVRSLNPLQVCAVLRSQEDERIALRFFYWADRLW 240
LVRDTCKLI+LS+SWNRKFEGELRYLVRSLNPLQVCAVL SQEDERIALRFFYWADRLW
Sbjct: 181 SLVRDTCKLIQLSTSWNRKFEGELRYLVRSLNPLQVCAVLLSQEDERIALRFFYWADRLW 240
Query: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQL PEAFGFVMVSYSRAGRLRDA
Sbjct: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLCPEAFGFVMVSYSRAGRLRDA 300
Query: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
MKVLTLMQ+AGVEPNLSICNTAIHILV+GNELKKALRFAERMVLIGIAPNVVTYNCLIKG
Sbjct: 301 MKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
Query: 361 YCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLP 420
YCNVHQVDQAMELIDQMP GCSPDKVSYY+VMGFLCRDKR+NEIRELMKKM DSNL+P
Sbjct: 361 YCNVHQVDQAMELIDQMPSNGCSPDKVSYYSVMGFLCRDKRLNEIRELMKKMHKDSNLVP 420
Query: 421 DHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNIKKAKELV 480
DHVTYNSLIQMLSKH HGDEALEI+REAE+L+FKVDKVEYSAIVHAYCKEG I+KAKELV
Sbjct: 421 DHVTYNSLIQMLSKHSHGDEALEIMREAEKLQFKVDKVEYSAIVHAYCKEGKIQKAKELV 480
Query: 481 GEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
EMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN
Sbjct: 481 SEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
Query: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI
Sbjct: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
Query: 601 NLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
NLL+ SLCRDGKP+EANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL
Sbjct: 601 NLLVHSLCRDGKPYEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
Query: 661 CNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQYCQKGRVED 720
CNKHPD+VTYTTLIDAL KT R+EEATELTMKMLRQGLVPSPVTYRSVIHQYC+KGRVED
Sbjct: 661 CNKHPDTVTYTTLIDALGKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVED 720
Query: 721 LLKLLKKMLSKSRFQTAYNLVIEKLCKFGYLEEANSLLSEVLRTASRTDAKTCHVLMESY 780
LLKLLKKML KSRFQTAYNLVIEKLCKFGYLEEANSLL EVLRTASRTDAKTCHVLMESY
Sbjct: 721 LLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESY 780
Query: 781 LSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLVEGKLEEADRLVLRFVERGYVSAQ 840
L+VGIPMSAYKVACRMFNRNL+PDLKLCEKVSKRL++EGKLEEADRLVLRFVERG+VSAQ
Sbjct: 781 LNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVLEGKLEEADRLVLRFVERGHVSAQ 840
Query: 841 DKKHLQD 848
+ KHL +
Sbjct: 841 ESKHLHN 847
BLAST of Lsi01G001210 vs. ExPASy TrEMBL
Match:
A0A1S3AYP8 (pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN=LOC103484342 PE=4 SV=1)
HSP 1 Score: 1563.1 bits (4046), Expect = 0.0e+00
Identity = 770/847 (90.91%), Postives = 810/847 (95.63%), Query Frame = 0
Query: 1 MLFIFNHYYRIGRKQIRFYELNDLNKFQKGSANSAFVLNGFIFKCFDHFCLHPLACTELG 60
M FI N Y++IGR+QIRF+ELN NKF+KG ANS FVLNG +++CF HFCLHPLACTELG
Sbjct: 1 MFFILNFYFKIGRRQIRFHELNYPNKFKKGGANSDFVLNGVVYQCFGHFCLHPLACTELG 60
Query: 61 AFFSSSSWRDSSFSRSLRTYCTDIYGRNNGFDAAIDGFQKTDLEDSGDSSFFGSPNEEHE 120
AFFSSSSWRDSSF RSLRTYCTDIYGRNN DAA D FQKTDLED+GDSS FG+P+EEH
Sbjct: 61 AFFSSSSWRDSSFDRSLRTYCTDIYGRNNASDAANDEFQKTDLEDTGDSSLFGNPSEEHG 120
Query: 121 KVQHFRFGDDIEDEESNEEEEEDEDLGDAADLLGSNLSNRNHGQGNDFKRVEIGEDIFRY 180
K +HF+FGDDIE EESN+EEEED DLGDAADLLGSNLSNRNHG+GNDFK+VEIGED+ R+
Sbjct: 121 KERHFKFGDDIEAEESNDEEEEDGDLGDAADLLGSNLSNRNHGRGNDFKKVEIGEDVLRH 180
Query: 181 PLVRDTCKLIKLSSSWNRKFEGELRYLVRSLNPLQVCAVLRSQEDERIALRFFYWADRLW 240
LVRDTCKLI+LS+SWNRKFEGELRYLVRSLNPLQVCAVL SQEDERIALRFFYWADRLW
Sbjct: 181 SLVRDTCKLIQLSTSWNRKFEGELRYLVRSLNPLQVCAVLLSQEDERIALRFFYWADRLW 240
Query: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQL PEAFGFVMVSYSRAGRLRDA
Sbjct: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLCPEAFGFVMVSYSRAGRLRDA 300
Query: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
MKVLTLMQ+AGVEPNLSICNTAIHILV+GNELKKALRFAERMVLIGIAPNVVTYNCLIKG
Sbjct: 301 MKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
Query: 361 YCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLP 420
YCNVHQVDQAMELIDQMP GCSPDKVSYY+VMGFLCRDKR+NEIRELMKKM DSNL+P
Sbjct: 361 YCNVHQVDQAMELIDQMPSNGCSPDKVSYYSVMGFLCRDKRLNEIRELMKKMHKDSNLVP 420
Query: 421 DHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNIKKAKELV 480
DHVTYNSLIQMLSKH HGDEALEI+REAE+LRFKVDKVEYSAIVHAYCKEG I+KAKELV
Sbjct: 421 DHVTYNSLIQMLSKHSHGDEALEIMREAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELV 480
Query: 481 GEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
EMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN
Sbjct: 481 SEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
Query: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI
Sbjct: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
Query: 601 NLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
NLL+ SLCRDGKP+EANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL
Sbjct: 601 NLLVHSLCRDGKPYEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
Query: 661 CNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQYCQKGRVED 720
CNKHPD+VTYTTLIDAL KT R+EEATELTMKMLRQGLVPSPVTYRSVIHQYC+KGRVED
Sbjct: 661 CNKHPDTVTYTTLIDALGKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVED 720
Query: 721 LLKLLKKMLSKSRFQTAYNLVIEKLCKFGYLEEANSLLSEVLRTASRTDAKTCHVLMESY 780
LLKLLKKML KSRFQTAYNLVIEKLCKFGYLEEANSLL EVLRTASRTDAKTCHVLMESY
Sbjct: 721 LLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESY 780
Query: 781 LSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLVEGKLEEADRLVLRFVERGYVSAQ 840
L+VGIPMSAYKVACRMFNRNL+PDLKLCEKVSKRL++EGKLEEADRLVLRFVERG+VSAQ
Sbjct: 781 LNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVLEGKLEEADRLVLRFVERGHVSAQ 840
Query: 841 DKKHLQD 848
+ KHL +
Sbjct: 841 ESKHLHN 847
BLAST of Lsi01G001210 vs. ExPASy TrEMBL
Match:
A0A6J1IIC2 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477747 PE=4 SV=1)
HSP 1 Score: 1526.5 bits (3951), Expect = 0.0e+00
Identity = 751/847 (88.67%), Postives = 799/847 (94.33%), Query Frame = 0
Query: 1 MLFIFNHYYRIGRKQIRFYELNDLNKFQKGSANSAFVLNGFIFKCFDHFCLHPLACTELG 60
MLFIFN+YYRIGR+QIR +ELN LNKFQKG AN +FV+NG ++KCFD F P+AC+E+G
Sbjct: 83 MLFIFNYYYRIGRRQIRVHELNYLNKFQKGGANFSFVVNGVVYKCFDRFTSQPIACSEVG 142
Query: 61 AFFSSSSWRDSSFSRSLRTYCTDIYGRNNGFDAAIDGFQKTDLEDSGDSSFFGSPNEEHE 120
AFFSSSSWRDSSF SLRTYC+D YGRNNG D D QKTDLE+SGDSSFFG+PNE ++
Sbjct: 143 AFFSSSSWRDSSFGCSLRTYCSDTYGRNNGLDDGNDELQKTDLENSGDSSFFGNPNENYK 202
Query: 121 KVQHFRFGDDIEDEESNEEEEEDEDLGDAADLLGSNLSNRNHGQGNDFKRVEIGEDIFRY 180
K +HF++GDDIE EESN+EE+E D+ DAADLL NLSN+NHGQGNDFKRVEIGE++FR
Sbjct: 203 KDRHFQYGDDIEAEESNDEEDEGGDVDDAADLLWPNLSNKNHGQGNDFKRVEIGENVFRN 262
Query: 181 PLVRDTCKLIKLSSSWNRKFEGELRYLVRSLNPLQVCAVLRSQEDERIALRFFYWADRLW 240
P VRDTCKLI+LSSSWNRKFEGELR+LVRSL P+QVCAVL S EDER++LRFFYWADRLW
Sbjct: 263 PSVRDTCKLIQLSSSWNRKFEGELRHLVRSLTPVQVCAVLLSLEDERLSLRFFYWADRLW 322
Query: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
RYRHDSSVYLVMLEILS+TKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA
Sbjct: 323 RYRHDSSVYLVMLEILSRTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 382
Query: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAE MVLIGIAPNVVTYNCLIKG
Sbjct: 383 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAECMVLIGIAPNVVTYNCLIKG 442
Query: 361 YCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLP 420
YCN +QVDQAME+IDQMP KGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKM+TDSNLLP
Sbjct: 443 YCNTYQVDQAMEMIDQMPSKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMQTDSNLLP 502
Query: 421 DHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNIKKAKELV 480
DHVTYNSLI MLSKHGHGDEALEILREAE LRFKVDKVEYSAIVHAYC+EG IKKAKELV
Sbjct: 503 DHVTYNSLIHMLSKHGHGDEALEILREAEALRFKVDKVEYSAIVHAYCREGKIKKAKELV 562
Query: 481 GEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
GEMFS GC PDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN
Sbjct: 563 GEMFSNGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 622
Query: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
GKSLEARKMMNMS+EEWWTPNAITYSVVVHGLR EGKLNEACD+VREMIGKGFFPNPVEI
Sbjct: 623 GKSLEARKMMNMSDEEWWTPNAITYSVVVHGLRWEGKLNEACDLVREMIGKGFFPNPVEI 682
Query: 601 NLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
NLL+QSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHG+CQKDDLEAALSLLDDMYL
Sbjct: 683 NLLVQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMYL 742
Query: 661 CNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQYCQKGRVED 720
CNKHPD+VTYTTLIDAL KTGR+EEATE TMKMLRQGLVPSPVTYRSVIHQYC+KG+VED
Sbjct: 743 CNKHPDTVTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGQVED 802
Query: 721 LLKLLKKMLSKSRFQTAYNLVIEKLCKFGYLEEANSLLSEVLRTASRTDAKTCHVLMESY 780
LLKLL KML+KSRFQTAYNLVIEKLCKFGYLEEANSLL EVLRTASR DAKTCHVLMESY
Sbjct: 803 LLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRNDAKTCHVLMESY 862
Query: 781 LSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLVEGKLEEADRLVLRFVERGYVSAQ 840
LS GIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLL+EG LEEADRL+LRFVERG VS+Q
Sbjct: 863 LSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLMEGNLEEADRLILRFVERGCVSSQ 922
Query: 841 DKKHLQD 848
++KHLQD
Sbjct: 923 NQKHLQD 929
BLAST of Lsi01G001210 vs. ExPASy TrEMBL
Match:
A0A6J1EJG8 (pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111433162 PE=4 SV=1)
HSP 1 Score: 1526.1 bits (3950), Expect = 0.0e+00
Identity = 753/847 (88.90%), Postives = 798/847 (94.21%), Query Frame = 0
Query: 1 MLFIFNHYYRIGRKQIRFYELNDLNKFQKGSANSAFVLNGFIFKCFDHFCLHPLACTELG 60
MLFIFN+YYRIGR+QIR +ELN LNKF+KG AN AFV+N ++KCFD F P+AC+E+G
Sbjct: 1 MLFIFNYYYRIGRRQIRVHELNYLNKFRKGGANFAFVVNEVVYKCFDRFTSQPIACSEVG 60
Query: 61 AFFSSSSWRDSSFSRSLRTYCTDIYGRNNGFDAAIDGFQKTDLEDSGDSSFFGSPNEEHE 120
AFFSSSSWRDSSF S+RTYC+D YGRNNG D A D QKTDLEDSGDSSFF +PNE++E
Sbjct: 61 AFFSSSSWRDSSFGCSVRTYCSDTYGRNNGLDDANDELQKTDLEDSGDSSFFRNPNEDYE 120
Query: 121 KVQHFRFGDDIEDEESNEEEEEDEDLGDAADLLGSNLSNRNHGQGNDFKRVEIGEDIFRY 180
K +HF+FGDDIE EESN+E++E + DAADLL NLSN+NHGQGNDFKRVEIGED+FR
Sbjct: 121 KDRHFQFGDDIEAEESNDEDDEGH-VDDAADLLWPNLSNKNHGQGNDFKRVEIGEDVFRS 180
Query: 181 PLVRDTCKLIKLSSSWNRKFEGELRYLVRSLNPLQVCAVLRSQEDERIALRFFYWADRLW 240
P VRDTCKLI+LSSSWNRKFEGELR+LVRSL P+QVCAVL S EDER++LRFFYWADRLW
Sbjct: 181 PSVRDTCKLIQLSSSWNRKFEGELRHLVRSLTPVQVCAVLLSLEDERLSLRFFYWADRLW 240
Query: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
RYRHDSSVYLVMLEILS+TKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA
Sbjct: 241 RYRHDSSVYLVMLEILSRTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
Query: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG
Sbjct: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
Query: 361 YCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLP 420
YCN +QVDQAME+IDQMP KGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKM+TDSNLLP
Sbjct: 361 YCNTYQVDQAMEMIDQMPSKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMQTDSNLLP 420
Query: 421 DHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNIKKAKELV 480
DHVTYNSLI MLSKHGHGDEALEILREAE LRFKVDKVEYSAIVHAYC+EG I KAKELV
Sbjct: 421 DHVTYNSLIHMLSKHGHGDEALEILREAEALRFKVDKVEYSAIVHAYCREGKINKAKELV 480
Query: 481 GEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
GEM S GC PDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN
Sbjct: 481 GEMLSNGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
Query: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACD+VREMIGKGFFPNPVEI
Sbjct: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDLVREMIGKGFFPNPVEI 600
Query: 601 NLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
NLL+QSLCRDGKPHEA QLLKECMNKGCAVNVVNFTTVIHG+CQKDDLEAALSLLDDMYL
Sbjct: 601 NLLVQSLCRDGKPHEATQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMYL 660
Query: 661 CNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQYCQKGRVED 720
CNKHPD+VTYTTLIDAL KTGR+EEATE TMKMLRQGLVPSPVTYRSVIHQYC+KGRVED
Sbjct: 661 CNKHPDTVTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGRVED 720
Query: 721 LLKLLKKMLSKSRFQTAYNLVIEKLCKFGYLEEANSLLSEVLRTASRTDAKTCHVLMESY 780
LLKLL KML+KSRFQTAYNLVIEKLCKFGYLEEANSLL EVLRTASRTDAKTCHVLMESY
Sbjct: 721 LLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESY 780
Query: 781 LSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLVEGKLEEADRLVLRFVERGYVSAQ 840
LS GIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLL+EG LEEADRL+LRFVERG VS+Q
Sbjct: 781 LSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLIEGNLEEADRLILRFVERGCVSSQ 840
Query: 841 DKKHLQD 848
++KHLQD
Sbjct: 841 NQKHLQD 846
BLAST of Lsi01G001210 vs. NCBI nr
Match:
XP_038881915.1 (pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida] >XP_038881917.1 pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida])
HSP 1 Score: 1581.2 bits (4093), Expect = 0.0e+00
Identity = 788/847 (93.03%), Postives = 812/847 (95.87%), Query Frame = 0
Query: 1 MLFIFNHYYRIGRKQIRFYELNDLNKFQKGSANSAFVLNGFIFKCFDHFCLHPLACTELG 60
MLFIFN+YYRIGRKQIRF+ELN LNKFQKGSANSAFVLNG I+KC HFCLH LAC+E
Sbjct: 1 MLFIFNYYYRIGRKQIRFHELNYLNKFQKGSANSAFVLNGVIYKCLGHFCLHLLACSEHC 60
Query: 61 AFFSSSSWRDSSFSRSLRTYCTDIYGRNNGFDAAIDGFQKTDLEDSGDSSFFGSPNEEHE 120
AFFSSSS RDSSF RSLRTYCTD YGRNN FDAA D FQKTDLEDSGDSSFFG+PNEEHE
Sbjct: 61 AFFSSSSRRDSSFGRSLRTYCTDTYGRNNRFDAANDEFQKTDLEDSGDSSFFGNPNEEHE 120
Query: 121 KVQHFRFGDDIEDEESNEEEEEDEDLGDAADLLGSNLSNRNHGQGNDFKRVEIGEDIFRY 180
K +H +FGDDI EESN+EEEED DLGDAADLLG NLS RNHGQGNDFKRVEIGEDIFRY
Sbjct: 121 KDRHLKFGDDIVAEESNDEEEEDGDLGDAADLLGFNLSIRNHGQGNDFKRVEIGEDIFRY 180
Query: 181 PLVRDTCKLIKLSSSWNRKFEGELRYLVRSLNPLQVCAVLRSQEDERIALRFFYWADRLW 240
PLVRDTCKLIKLSSSW+RKFEGELRYLVRSLNP QVCAVL SQEDERIAL+FFYWADRLW
Sbjct: 181 PLVRDTCKLIKLSSSWSRKFEGELRYLVRSLNPQQVCAVLLSQEDERIALQFFYWADRLW 240
Query: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA
Sbjct: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
Query: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKAL+FAERMVLIGIAPNVVTYNCLIKG
Sbjct: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALKFAERMVLIGIAPNVVTYNCLIKG 360
Query: 361 YCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLP 420
YCNVHQV QAMELIDQMP KGC PDKVSYYTVMGFLCRDKRVNEIRELMKKM+ DSNLLP
Sbjct: 361 YCNVHQVGQAMELIDQMPSKGCFPDKVSYYTVMGFLCRDKRVNEIRELMKKMQMDSNLLP 420
Query: 421 DHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNIKKAKELV 480
DHVTYNSLIQMLSK+GHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEG IKKAKELV
Sbjct: 421 DHVTYNSLIQMLSKYGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGKIKKAKELV 480
Query: 481 GEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
GEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN
Sbjct: 481 GEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
Query: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
GKSLEAR MMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI
Sbjct: 541 GKSLEARNMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
Query: 601 NLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
NLLIQSLCRDGKP+EANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSL DDMYL
Sbjct: 601 NLLIQSLCRDGKPYEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLFDDMYL 660
Query: 661 CNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQYCQKGRVED 720
CNKHPDSVTYTT+IDAL KTGRMEEATELTMKMLRQGLVPSPVT+RSVIHQYC+KGRVED
Sbjct: 661 CNKHPDSVTYTTVIDALGKTGRMEEATELTMKMLRQGLVPSPVTFRSVIHQYCRKGRVED 720
Query: 721 LLKLLKKMLSKSRFQTAYNLVIEKLCKFGYLEEANSLLSEVLRTASRTDAKTCHVLMESY 780
LLK+LKKML KSRFQTAYNLVIEKLCKFGYLEEA+SLL EVLRTASRTDAKTCHVLMESY
Sbjct: 721 LLKILKKMLLKSRFQTAYNLVIEKLCKFGYLEEASSLLGEVLRTASRTDAKTCHVLMESY 780
Query: 781 LSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLVEGKLEEADRLVLRFVERGYVSAQ 840
L VGIPMSAYKVACRMFNRNL+PDLKLCEKVSKRL++EGKLEEADRLV RFVERG VSAQ
Sbjct: 781 LRVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLMIEGKLEEADRLVFRFVERGCVSAQ 840
Query: 841 DKKHLQD 848
++KHLQD
Sbjct: 841 EQKHLQD 847
BLAST of Lsi01G001210 vs. NCBI nr
Match:
XP_011658305.1 (pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KGN49425.1 hypothetical protein Csa_003248 [Cucumis sativus])
HSP 1 Score: 1565.8 bits (4053), Expect = 0.0e+00
Identity = 775/847 (91.50%), Postives = 810/847 (95.63%), Query Frame = 0
Query: 1 MLFIFNHYYRIGRKQIRFYELNDLNKFQKGSANSAFVLNGFIFKCFDHFCLHPLACTELG 60
MLFI N Y++ GRKQIRF+ELN LNKFQ+G ANS FVLNG ++KCFDHFCLHPLACTE G
Sbjct: 1 MLFIINFYFKFGRKQIRFHELNYLNKFQRGVANSDFVLNGVVYKCFDHFCLHPLACTEFG 60
Query: 61 AFFSSSSWRDSSFSRSLRTYCTDIYGRNNGFDAAIDGFQKTDLEDSGDSSFFGSPNEEHE 120
AFFSSSSWRDSSF RSLRTYCTDIYGRNNG DAA D FQKTDLED+GDSSFFGSP+EEH
Sbjct: 61 AFFSSSSWRDSSFGRSLRTYCTDIYGRNNGSDAANDEFQKTDLEDTGDSSFFGSPSEEHG 120
Query: 121 KVQHFRFGDDIEDEESNEEEEEDEDLGDAADLLGSNLSNRNHGQGNDFKRVEIGEDIFRY 180
K +HF+FGDDIE EESN+EEEED DLGDAADLLGSNLSNR+ GQGND K+VEIGED+FR+
Sbjct: 121 KERHFKFGDDIEAEESNDEEEEDGDLGDAADLLGSNLSNRDPGQGNDCKKVEIGEDVFRH 180
Query: 181 PLVRDTCKLIKLSSSWNRKFEGELRYLVRSLNPLQVCAVLRSQEDERIALRFFYWADRLW 240
LVRDTCKLI+LSSSWNRKFEGELRYLVRSLNPLQVCAVL SQEDER ALRFFYWADRLW
Sbjct: 181 SLVRDTCKLIQLSSSWNRKFEGELRYLVRSLNPLQVCAVLLSQEDERNALRFFYWADRLW 240
Query: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
RYRHDSSVYLVMLEILSKTKLCQGAKR+LRLMTRR IQL PEAFGFVMVSYSRAGRLRDA
Sbjct: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDA 300
Query: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
MKVLTLMQ+AGVEPNLSICNTAIHILV+GNELKKALRFAERMVLIGIAPNVVTYNCLIKG
Sbjct: 301 MKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
Query: 361 YCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLP 420
YCNVHQVDQAMELIDQMP KGCSPDKVSYYTVMG LCRDKR+NEIREL+KKM+TDS LLP
Sbjct: 361 YCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLP 420
Query: 421 DHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNIKKAKELV 480
DHVTYNSLIQMLSKHGHGDEALEIL+EAE+LRFKVDKVEYSAIVHAYCKEG I+KAKELV
Sbjct: 421 DHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELV 480
Query: 481 GEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
EMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTT LNGLCRN
Sbjct: 481 SEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRN 540
Query: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI
Sbjct: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
Query: 601 NLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
NLL+ SLCRDGKP EANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL
Sbjct: 601 NLLVHSLCRDGKPREANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
Query: 661 CNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQYCQKGRVED 720
CNKHPD+VTYT LIDALAKT R+EEATELTMKMLRQGLVPSPVTYRSVIHQYC+KGRVED
Sbjct: 661 CNKHPDTVTYTALIDALAKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVED 720
Query: 721 LLKLLKKMLSKSRFQTAYNLVIEKLCKFGYLEEANSLLSEVLRTASRTDAKTCHVLMESY 780
LLKLLKKML KSRFQTAYNLVIEKLCKFGYLEEANSLL EVLRTASRTDAKTCHVLMESY
Sbjct: 721 LLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESY 780
Query: 781 LSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLVEGKLEEADRLVLRFVERGYVSAQ 840
L+VGIPMSAYKVACRMFNRNL+PDLKLCEKVSKRL+VEGKLEEADRLVLRFVERG+VSAQ
Sbjct: 781 LNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVVEGKLEEADRLVLRFVERGHVSAQ 840
Query: 841 DKKHLQD 848
+ KHL +
Sbjct: 841 EPKHLHN 847
BLAST of Lsi01G001210 vs. NCBI nr
Match:
KAA0052519.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK13306.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])
HSP 1 Score: 1563.1 bits (4046), Expect = 0.0e+00
Identity = 770/847 (90.91%), Postives = 811/847 (95.75%), Query Frame = 0
Query: 1 MLFIFNHYYRIGRKQIRFYELNDLNKFQKGSANSAFVLNGFIFKCFDHFCLHPLACTELG 60
MLFI N Y++IGR+QIRF+ELN NKF+KG ANS FVLNG +++CF HFCLHPLACTELG
Sbjct: 1 MLFILNFYFKIGRRQIRFHELNYPNKFKKGGANSDFVLNGVVYQCFGHFCLHPLACTELG 60
Query: 61 AFFSSSSWRDSSFSRSLRTYCTDIYGRNNGFDAAIDGFQKTDLEDSGDSSFFGSPNEEHE 120
AFFSSSSWRDSSF RSLRTYCTDIYGRNN DAA D FQKTDLED+GDSS FG+P+EEH
Sbjct: 61 AFFSSSSWRDSSFGRSLRTYCTDIYGRNNASDAANDEFQKTDLEDTGDSSLFGNPSEEHG 120
Query: 121 KVQHFRFGDDIEDEESNEEEEEDEDLGDAADLLGSNLSNRNHGQGNDFKRVEIGEDIFRY 180
K +HF+FGDDIE EESN+EEEED DLGDAADLLGSNLSNRNHG+GNDFK+VEIGED+ R+
Sbjct: 121 KERHFKFGDDIEAEESNDEEEEDGDLGDAADLLGSNLSNRNHGRGNDFKKVEIGEDVLRH 180
Query: 181 PLVRDTCKLIKLSSSWNRKFEGELRYLVRSLNPLQVCAVLRSQEDERIALRFFYWADRLW 240
LVRDTCKLI+LS+SWNRKFEGELRYLVRSLNPLQVCAVL SQEDERIALRFFYWADRLW
Sbjct: 181 SLVRDTCKLIQLSTSWNRKFEGELRYLVRSLNPLQVCAVLLSQEDERIALRFFYWADRLW 240
Query: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQL PEAFGFVMVSYSRAGRLRDA
Sbjct: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLCPEAFGFVMVSYSRAGRLRDA 300
Query: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
MKVLTLMQ+AGVEPNLSICNTAIHILV+GNELKKALRFAERMVLIGIAPNVVTYNCLIKG
Sbjct: 301 MKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
Query: 361 YCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLP 420
YCNVHQVDQAMELIDQMP GCSPDKVSYY+VMGFLCRDKR+NEIRELMKKM DSNL+P
Sbjct: 361 YCNVHQVDQAMELIDQMPSNGCSPDKVSYYSVMGFLCRDKRLNEIRELMKKMHKDSNLVP 420
Query: 421 DHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNIKKAKELV 480
DHVTYNSLIQMLSKH HGDEALEI+REAE+L+FKVDKVEYSAIVHAYCKEG I+KAKELV
Sbjct: 421 DHVTYNSLIQMLSKHSHGDEALEIMREAEKLQFKVDKVEYSAIVHAYCKEGKIQKAKELV 480
Query: 481 GEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
EMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN
Sbjct: 481 SEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
Query: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI
Sbjct: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
Query: 601 NLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
NLL+ SLCRDGKP+EANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL
Sbjct: 601 NLLVHSLCRDGKPYEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
Query: 661 CNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQYCQKGRVED 720
CNKHPD+VTYTTLIDAL KT R+EEATELTMKMLRQGLVPSPVTYRSVIHQYC+KGRVED
Sbjct: 661 CNKHPDTVTYTTLIDALGKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVED 720
Query: 721 LLKLLKKMLSKSRFQTAYNLVIEKLCKFGYLEEANSLLSEVLRTASRTDAKTCHVLMESY 780
LLKLLKKML KSRFQTAYNLVIEKLCKFGYLEEANSLL EVLRTASRTDAKTCHVLMESY
Sbjct: 721 LLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESY 780
Query: 781 LSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLVEGKLEEADRLVLRFVERGYVSAQ 840
L+VGIPMSAYKVACRMFNRNL+PDLKLCEKVSKRL++EGKLEEADRLVLRFVERG+VSAQ
Sbjct: 781 LNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVLEGKLEEADRLVLRFVERGHVSAQ 840
Query: 841 DKKHLQD 848
+ KHL +
Sbjct: 841 ESKHLHN 847
BLAST of Lsi01G001210 vs. NCBI nr
Match:
XP_008439592.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo])
HSP 1 Score: 1563.1 bits (4046), Expect = 0.0e+00
Identity = 770/847 (90.91%), Postives = 810/847 (95.63%), Query Frame = 0
Query: 1 MLFIFNHYYRIGRKQIRFYELNDLNKFQKGSANSAFVLNGFIFKCFDHFCLHPLACTELG 60
M FI N Y++IGR+QIRF+ELN NKF+KG ANS FVLNG +++CF HFCLHPLACTELG
Sbjct: 1 MFFILNFYFKIGRRQIRFHELNYPNKFKKGGANSDFVLNGVVYQCFGHFCLHPLACTELG 60
Query: 61 AFFSSSSWRDSSFSRSLRTYCTDIYGRNNGFDAAIDGFQKTDLEDSGDSSFFGSPNEEHE 120
AFFSSSSWRDSSF RSLRTYCTDIYGRNN DAA D FQKTDLED+GDSS FG+P+EEH
Sbjct: 61 AFFSSSSWRDSSFDRSLRTYCTDIYGRNNASDAANDEFQKTDLEDTGDSSLFGNPSEEHG 120
Query: 121 KVQHFRFGDDIEDEESNEEEEEDEDLGDAADLLGSNLSNRNHGQGNDFKRVEIGEDIFRY 180
K +HF+FGDDIE EESN+EEEED DLGDAADLLGSNLSNRNHG+GNDFK+VEIGED+ R+
Sbjct: 121 KERHFKFGDDIEAEESNDEEEEDGDLGDAADLLGSNLSNRNHGRGNDFKKVEIGEDVLRH 180
Query: 181 PLVRDTCKLIKLSSSWNRKFEGELRYLVRSLNPLQVCAVLRSQEDERIALRFFYWADRLW 240
LVRDTCKLI+LS+SWNRKFEGELRYLVRSLNPLQVCAVL SQEDERIALRFFYWADRLW
Sbjct: 181 SLVRDTCKLIQLSTSWNRKFEGELRYLVRSLNPLQVCAVLLSQEDERIALRFFYWADRLW 240
Query: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQL PEAFGFVMVSYSRAGRLRDA
Sbjct: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLCPEAFGFVMVSYSRAGRLRDA 300
Query: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
MKVLTLMQ+AGVEPNLSICNTAIHILV+GNELKKALRFAERMVLIGIAPNVVTYNCLIKG
Sbjct: 301 MKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
Query: 361 YCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLP 420
YCNVHQVDQAMELIDQMP GCSPDKVSYY+VMGFLCRDKR+NEIRELMKKM DSNL+P
Sbjct: 361 YCNVHQVDQAMELIDQMPSNGCSPDKVSYYSVMGFLCRDKRLNEIRELMKKMHKDSNLVP 420
Query: 421 DHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNIKKAKELV 480
DHVTYNSLIQMLSKH HGDEALEI+REAE+LRFKVDKVEYSAIVHAYCKEG I+KAKELV
Sbjct: 421 DHVTYNSLIQMLSKHSHGDEALEIMREAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELV 480
Query: 481 GEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
EMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN
Sbjct: 481 SEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
Query: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI
Sbjct: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
Query: 601 NLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
NLL+ SLCRDGKP+EANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL
Sbjct: 601 NLLVHSLCRDGKPYEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
Query: 661 CNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQYCQKGRVED 720
CNKHPD+VTYTTLIDAL KT R+EEATELTMKMLRQGLVPSPVTYRSVIHQYC+KGRVED
Sbjct: 661 CNKHPDTVTYTTLIDALGKTDRIEEATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVED 720
Query: 721 LLKLLKKMLSKSRFQTAYNLVIEKLCKFGYLEEANSLLSEVLRTASRTDAKTCHVLMESY 780
LLKLLKKML KSRFQTAYNLVIEKLCKFGYLEEANSLL EVLRTASRTDAKTCHVLMESY
Sbjct: 721 LLKLLKKMLLKSRFQTAYNLVIEKLCKFGYLEEANSLLGEVLRTASRTDAKTCHVLMESY 780
Query: 781 LSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLVEGKLEEADRLVLRFVERGYVSAQ 840
L+VGIPMSAYKVACRMFNRNL+PDLKLCEKVSKRL++EGKLEEADRLVLRFVERG+VSAQ
Sbjct: 781 LNVGIPMSAYKVACRMFNRNLIPDLKLCEKVSKRLVLEGKLEEADRLVLRFVERGHVSAQ 840
Query: 841 DKKHLQD 848
+ KHL +
Sbjct: 841 ESKHLHN 847
BLAST of Lsi01G001210 vs. NCBI nr
Match:
KAG6581451.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 1535.0 bits (3973), Expect = 0.0e+00
Identity = 755/847 (89.14%), Postives = 801/847 (94.57%), Query Frame = 0
Query: 1 MLFIFNHYYRIGRKQIRFYELNDLNKFQKGSANSAFVLNGFIFKCFDHFCLHPLACTELG 60
MLFIFN+YYRIGR+QIR +ELN LNKFQKG AN AFV+N ++KCFD F P+AC+E+G
Sbjct: 1 MLFIFNYYYRIGRRQIRVHELNYLNKFQKGGANFAFVVNEVVYKCFDRFTSQPIACSEVG 60
Query: 61 AFFSSSSWRDSSFSRSLRTYCTDIYGRNNGFDAAIDGFQKTDLEDSGDSSFFGSPNEEHE 120
AFFSSSSWRDSSF S+RTYC+D YGRNNG D A D QKTDLEDSGDSSFF +PNE++E
Sbjct: 61 AFFSSSSWRDSSFGCSVRTYCSDTYGRNNGLDDANDELQKTDLEDSGDSSFFRNPNEDYE 120
Query: 121 KVQHFRFGDDIEDEESNEEEEEDEDLGDAADLLGSNLSNRNHGQGNDFKRVEIGEDIFRY 180
K +HF+FGDDIE EESN+EE+E D+ DAADLL NLSN+NHGQGNDFKRVEIGED+FR
Sbjct: 121 KDRHFQFGDDIEAEESNDEEDEGGDVDDAADLLWPNLSNKNHGQGNDFKRVEIGEDVFRS 180
Query: 181 PLVRDTCKLIKLSSSWNRKFEGELRYLVRSLNPLQVCAVLRSQEDERIALRFFYWADRLW 240
P VRDTCKLI+LSSSWNRKFEGELR+LVRSL P+QVCAVL S EDER++LRFFYWADRLW
Sbjct: 181 PSVRDTCKLIQLSSSWNRKFEGELRHLVRSLTPVQVCAVLLSLEDERLSLRFFYWADRLW 240
Query: 241 RYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
RYRHDSSVYLVMLEILS+TKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA
Sbjct: 241 RYRHDSSVYLVMLEILSRTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDA 300
Query: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG
Sbjct: 301 MKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKG 360
Query: 361 YCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLP 420
YCN +QVDQAME+IDQMP KGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKM+TDSNLLP
Sbjct: 361 YCNTYQVDQAMEMIDQMPSKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMQTDSNLLP 420
Query: 421 DHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNIKKAKELV 480
DHVTYNSLI MLSKHGHGDEALEILREAE LRFKVDKVEYSAIVHAYC+EG I KAKELV
Sbjct: 421 DHVTYNSLIHMLSKHGHGDEALEILREAEALRFKVDKVEYSAIVHAYCREGKINKAKELV 480
Query: 481 GEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
GEMFS GC PDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN
Sbjct: 481 GEMFSNGCAPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRN 540
Query: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEI 600
GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACD+VREMIGKGFFPNPVEI
Sbjct: 541 GKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDLVREMIGKGFFPNPVEI 600
Query: 601 NLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYL 660
NLL+QSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHG+CQKDDLEAALSLLDDMYL
Sbjct: 601 NLLVQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGYCQKDDLEAALSLLDDMYL 660
Query: 661 CNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQYCQKGRVED 720
CNKHPD++TYTTLIDAL KTGR+EEATE TMKMLRQGLVPSPVTYRSVIHQYC+KGRVED
Sbjct: 661 CNKHPDTMTYTTLIDALGKTGRIEEATEFTMKMLRQGLVPSPVTYRSVIHQYCRKGRVED 720
Query: 721 LLKLLKKMLSKSRFQTAYNLVIEKLCKFGYLEEANSLLSEVLRTASRTDAKTCHVLMESY 780
LLKLL KML+KSRFQTAYNLVIEKLCKFGYLEEANSLL +VLRTASRTDA+TCHVLMESY
Sbjct: 721 LLKLLTKMLAKSRFQTAYNLVIEKLCKFGYLEEANSLLGKVLRTASRTDARTCHVLMESY 780
Query: 781 LSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLVEGKLEEADRLVLRFVERGYVSAQ 840
LS GIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLL+EG LEEADRL+LRFVERG VS+Q
Sbjct: 781 LSAGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLIEGNLEEADRLILRFVERGCVSSQ 840
Query: 841 DKKHLQD 848
++KHLQD
Sbjct: 841 NQKHLQD 847
BLAST of Lsi01G001210 vs. TAIR 10
Match:
AT1G30290.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 968.4 bits (2502), Expect = 3.8e-282
Identity = 472/740 (63.78%), Postives = 594/740 (80.27%), Query Frame = 0
Query: 107 GDSSFFGSPNEEHEKVQHFRFGDDIEDEESN--EEEEEDEDLGDAADLLGSNLSNRNHGQ 166
GD F N ++ G+D +DEE N +E D+D A L S G
Sbjct: 74 GDPEFGEIRNPRFNEID--ELGEDDDDEEGNVTSGDELDDDNDGFAVLKSIPQSREEAG- 133
Query: 167 GNDFKRVEIGEDIFRYPLVRDTCKLIKLSSSWNRKFEGELRYLVRSLNPLQVCAVLRSQE 226
R ++ ED R+PLVR+ +LI L SSWN K EG++R L+RSL P QVCAVLRSQ+
Sbjct: 134 -----RFDVEEDESRHPLVREVGRLIGLRSSWNPKHEGQMRNLLRSLKPSQVCAVLRSQD 193
Query: 227 DERIALRFFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAF 286
DER+AL+FFYWADR WRYRHD VY MLE+LSKTKLCQG++RVL LM RRGI PEAF
Sbjct: 194 DERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAF 253
Query: 287 GFVMVSYSRAGRLRDAMKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVL 346
VMVSYSRAG+LRDA+KVLTLMQRAGVEPNL ICNT I + V N L+KALRF ERM +
Sbjct: 254 SRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQV 313
Query: 347 IGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNE 406
+GI PNVVTYNC+I+GYC++H+V++A+EL++ M KGC PDKVSYYT+MG+LC++KR+ E
Sbjct: 314 VGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVE 373
Query: 407 IRELMKKMRTDSNLLPDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIV 466
+R+LMKKM + L+PD VTYN+LI ML+KH H DEAL L++A+E F++DK+ YSAIV
Sbjct: 374 VRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIV 433
Query: 467 HAYCKEGNIKKAKELVGEMFSKG-CDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHC 526
HA CKEG + +AK+L+ EM SKG C PDVVTYT+V++GFCR+G++D+AKK++Q M+ H
Sbjct: 434 HALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH 493
Query: 527 KPNAVTYTTLLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACD 586
KPN V+YT LLNG+CR GKSLEAR+MMNMSEE WW+PN+ITYSV++HGLRREGKL+EACD
Sbjct: 494 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 553
Query: 587 VVREMIGKGFFPNPVEINLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFC 646
VVREM+ KGFFP PVEINLL+QSLCRDG+ HEA + ++EC+NKGCA+NVVNFTTVIHGFC
Sbjct: 554 VVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 613
Query: 647 QKDDLEAALSLLDDMYLCNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPV 706
Q D+L+AALS+LDDMYL NKH D TYTTL+D L K GR+ EATEL KML +G+ P+PV
Sbjct: 614 QNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPV 673
Query: 707 TYRSVIHQYCQKGRVEDLLKLLKKMLSKSRFQTAYNLVIEKLCKFGYLEEANSLLSEVLR 766
TYR+VIH+YCQ G+V+DL+ +L+KM+S+ + +T YN VIEKLC G LEEA++LL +VLR
Sbjct: 674 TYRTVIHRYCQMGKVDDLVAILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLR 733
Query: 767 TASRTDAKTCHVLMESYLSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKRLLVEGKLEE 826
TASR+DAKTC+ LME YL G+P+SAYKVACRMFNRNL+PD+K+CEK+SKRL+++GK++E
Sbjct: 734 TASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDE 793
Query: 827 ADRLVLRFVERGYVSAQDKK 844
AD+L+LR VERG++S Q K
Sbjct: 794 ADKLMLRLVERGHISPQSLK 805
BLAST of Lsi01G001210 vs. TAIR 10
Match:
AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 283.9 bits (725), Expect = 4.3e-76
Identity = 177/625 (28.32%), Postives = 317/625 (50.72%), Query Frame = 0
Query: 220 LRSQEDERIALRFFYWADRLWRYRHDSSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQL 279
LRSQ D+ ALR F A + + + ++Y +L L ++ K++L M ++
Sbjct: 57 LRSQPDDSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 280 WPEAFGFVMVSYSRAGRLRDAMKVLT-LMQRAGVEPNLSICNTAIHILVVGNELKKALRF 339
F ++ SY++ + + V+ ++ G++P+ N +++LV GN LK
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEIS 176
Query: 340 AERMVLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVM-GFLC 399
+M + GI P+V T+N LIK C HQ+ A+ +++ MP G PD+ ++ TVM G++
Sbjct: 177 HAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIE 236
Query: 400 RDKRVNEIRELMKKMRTDSNLLPDHVTYNSLIQMLSKHGHGDEALEILRE-AEELRFKVD 459
+R +++ + +V+ N ++ K G ++AL ++E + + F D
Sbjct: 237 EGDLDGALR--IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPD 296
Query: 460 KVEYSAIVHAYCKEGNIKKAKELVGEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQ 519
+ ++ +V+ CK G++K A E++ M +G DPDV TY SV+ G C++G++ +A +++
Sbjct: 297 QYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLD 356
Query: 520 QMYKHHCKPNAVTYTTLLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREG 579
QM C PN VTY TL++ LC+ + EA ++ + + P+ T++ ++ GL
Sbjct: 357 QMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTR 416
Query: 580 KLNEACDVVREMIGKGFFPNPVEINLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFT 639
A ++ EM KG P+ N+LI SLC GK EA +LK+ GCA +V+ +
Sbjct: 417 NHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYN 476
Query: 640 TVIHGFCQKDDLEAALSLLDDMYLCNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQ 699
T+I GFC+ + A + D+M + +SVTY TLID L K+ R+E+A +L +M+ +
Sbjct: 477 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 536
Query: 700 GLVPSPVTYRSVIHQYCQKGRVEDLLKLLKKMLSKSRFQ--TAYNLVIEKLCKFGYLEEA 759
G P TY S++ +C+ G ++ +++ M S Y +I LCK G +E A
Sbjct: 537 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 596
Query: 760 NSLLSEVLRTASRTDAKTCHVLMESYLSVGIPMSAYKVACRMFNRNLLPDLKLCEKVSKR 819
+ LL + + +++ A + M +N P + ++ R
Sbjct: 597 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 656
Query: 820 LLVE--GKLEEADRLVLRFVERGYV 838
L G + EA ++ +E+G+V
Sbjct: 657 GLCNGGGPIREAVDFLVELLEKGFV 679
BLAST of Lsi01G001210 vs. TAIR 10
Match:
AT5G39710.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 276.9 bits (707), Expect = 5.3e-74
Identity = 167/537 (31.10%), Postives = 282/537 (52.51%), Query Frame = 0
Query: 246 SSVYLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGR-LRDAMKVL 305
SSV+ ++++ S+ L A ++ L G ++ V+ + R+ R + A V
Sbjct: 134 SSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVF 193
Query: 306 TLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNV 365
M + V PN+ N I + AL ++M G PNVVTYN LI GYC +
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253
Query: 366 HQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLPDHVT 425
++D +L+ M KG P+ +SY V+ LCR+ R+ E+ ++ +M L D VT
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSL-DEVT 313
Query: 426 YNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGNIKKAKELVGEMF 485
YN+LI+ K G+ +AL + E + Y++++H+ CK GN+ +A E + +M
Sbjct: 314 YNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMR 373
Query: 486 SKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRNGKSL 545
+G P+ TYT+++DGF + G +++A +++++M + P+ VTY L+NG C GK
Sbjct: 374 VRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKME 433
Query: 546 EARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLI 605
+A ++ +E+ +P+ ++YS V+ G R ++EA V REM+ KG P+ + + LI
Sbjct: 434 DAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLI 493
Query: 606 QSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKH 665
Q C + EA L +E + G + +T +I+ +C + DLE AL L ++M
Sbjct: 494 QGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 553
Query: 666 PDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYR---------------SVI 725
PD VTY+ LI+ L K R EA L +K+ + VPS VTY S+I
Sbjct: 554 PDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLI 613
Query: 726 HQYCQKGRVEDLLKLLKKMLSKSRFQ--TAYNLVIEKLCKFGYLEEANSLLSEVLRT 765
+C KG + + ++ + ML K+ TAYN++I C+ G + +A +L E++++
Sbjct: 614 KGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKS 669
BLAST of Lsi01G001210 vs. TAIR 10
Match:
AT3G04760.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )
HSP 1 Score: 276.2 bits (705), Expect = 9.0e-74
Identity = 149/473 (31.50%), Postives = 258/473 (54.55%), Query Frame = 0
Query: 293 RAGRLRDAMKVLTLMQRAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVV 352
R+G +++ +L M R G P++ +C I + KA+R E + G P+V
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVF 160
Query: 353 TYNCLIKGYCNVHQVDQAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKM 412
YN LI G+C ++++D A ++D+M K SPD V+Y ++G LC +++ +++ ++
Sbjct: 161 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 220
Query: 413 RTDSNLLPDHVTYNSLIQMLSKHGHGDEALEILREAEELRFKVDKVEYSAIVHAYCKEGN 472
+D N P +TY LI+ G DEAL+++ E K D Y+ I+ CKEG
Sbjct: 221 LSD-NCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 280
Query: 473 IKKAKELVGEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTT 532
+ +A E+V + KGC+PDV++Y +L GK ++ +K+M +M+ C PN VTY+
Sbjct: 281 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 340
Query: 533 LLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKG 592
L+ LCR+GK EA ++ + +E+ TP+A +Y ++ REG+L+ A + + MI G
Sbjct: 341 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDG 400
Query: 593 FFPNPVEINLLIQSLCRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAAL 652
P+ V N ++ +LC++GK +A ++ + GC+ N ++ T+ D AL
Sbjct: 401 CLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRAL 460
Query: 653 SLLDDMYLCNKHPDSVTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQY 712
++ +M PD +TY ++I L + G ++EA EL + M PS VTY V+ +
Sbjct: 461 HMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGF 520
Query: 713 CQKGRVEDLLKLLKKMLSKS--RFQTAYNLVIEKLCKFGYLEEANSLLSEVLR 764
C+ R+ED + +L+ M+ +T Y ++IE + GY EA L ++++R
Sbjct: 521 CKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
BLAST of Lsi01G001210 vs. TAIR 10
Match:
AT5G64320.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 273.5 bits (698), Expect = 5.8e-73
Identity = 157/536 (29.29%), Postives = 288/536 (53.73%), Query Frame = 0
Query: 249 YLVMLEILSKTKLCQGAKRVLRLMTRRGIQLWPEAFGFVMVSYSRAGRLRDAMKVLTLMQ 308
Y V+LEIL + A V M R I FG VM ++ + A+ +L M
Sbjct: 185 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMT 244
Query: 309 RAGVEPNLSICNTAIHILVVGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVHQVD 368
+ G PN I T IH L N + +AL+ E M L+G P+ T+N +I G C +++
Sbjct: 245 KHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRIN 304
Query: 369 QAMELIDQMPFKGCSPDKVSYYTVMGFLCRDKRVNEIRELMKKMRTDSNLLPDHVTYNSL 428
+A +++++M +G +PD ++Y +M LC+ RV+ ++L ++ P+ V +N+L
Sbjct: 305 EAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PEIVIFNTL 364
Query: 429 IQMLSKHGHGDEALEILRE-AEELRFKVDKVEYSAIVHAYCKEGNIKKAKELVGEMFSKG 488
I HG D+A +L + D Y+++++ Y KEG + A E++ +M +KG
Sbjct: 365 IHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKG 424
Query: 489 CDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTYTTLLNGLCRNGKSLEAR 548
C P+V +YT ++DGFC++GK+D+A ++ +M KPN V + L++ C+ + EA
Sbjct: 425 CKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAV 484
Query: 549 KMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLIQSL 608
++ + P+ T++ ++ GL ++ A ++R+MI +G N V N LI +
Sbjct: 485 EIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAF 544
Query: 609 CRDGKPHEANQLLKECMNKGCAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLCNKHPDS 668
R G+ EA +L+ E + +G ++ + + ++I G C+ +++ A SL + M P +
Sbjct: 545 LRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSN 604
Query: 669 VTYTTLIDALAKTGRMEEATELTMKMLRQGLVPSPVTYRSVIHQYCQKGRVEDLLKLLKK 728
++ LI+ L ++G +EEA E +M+ +G P VT+ S+I+ C+ GR+ED L + +K
Sbjct: 605 ISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRK 664
Query: 729 MLSKS--RFQTAYNLVIEKLCKFGYLEEANSLLSEVLRTASRTDAKTCHVLMESYL 782
+ ++ +N ++ LCK G++ +A LL E + + +T +L++S +
Sbjct: 665 LQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSII 715
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9LFF1 | 6.0e-75 | 28.32 | Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... | [more] |
Q9FIX3 | 7.4e-73 | 31.10 | Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana OX... | [more] |
Q9SR00 | 1.3e-72 | 31.50 | Pentatricopeptide repeat-containing protein At3g04760, chloroplastic OS=Arabidop... | [more] |
Q9FMF6 | 8.2e-72 | 29.29 | Pentatricopeptide repeat-containing protein At5g64320, mitochondrial OS=Arabidop... | [more] |
Q3EDF8 | 1.0e-69 | 29.51 | Pentatricopeptide repeat-containing protein At1g09900 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0KI72 | 0.0e+00 | 91.50 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524630 PE=4 SV=1 | [more] |
A0A5D3CSD4 | 0.0e+00 | 90.91 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
A0A1S3AYP8 | 0.0e+00 | 90.91 | pentatricopeptide repeat-containing protein At1g09900 OS=Cucumis melo OX=3656 GN... | [more] |
A0A6J1IIC2 | 0.0e+00 | 88.67 | pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like isofor... | [more] |
A0A6J1EJG8 | 0.0e+00 | 88.90 | pentatricopeptide repeat-containing protein At3g04760, chloroplastic-like OS=Cuc... | [more] |
Match Name | E-value | Identity | Description | |
XP_038881915.1 | 0.0e+00 | 93.03 | pentatricopeptide repeat-containing protein At1g09900 [Benincasa hispida] >XP_03... | [more] |
XP_011658305.1 | 0.0e+00 | 91.50 | pentatricopeptide repeat-containing protein At1g09900 [Cucumis sativus] >KGN4942... | [more] |
KAA0052519.1 | 0.0e+00 | 90.91 | pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK13306... | [more] |
XP_008439592.1 | 0.0e+00 | 90.91 | PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Cucumis melo] | [more] |
KAG6581451.1 | 0.0e+00 | 89.14 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
Match Name | E-value | Identity | Description | |
AT1G30290.1 | 3.8e-282 | 63.78 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G53700.1 | 4.3e-76 | 28.32 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G39710.1 | 5.3e-74 | 31.10 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G04760.1 | 9.0e-74 | 31.50 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT5G64320.1 | 5.8e-73 | 29.29 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |