Lcy13g015560 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy13g015560
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Protein TIC 214
Location	Chr13: 40661169 .. 40662138 (-)
RNA-Seq Expression	Lcy13g015560
Synteny	Lcy13g015560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGTCCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATGAGCAACAACAGGTTTTATTATAGGACAGCTCATGATGTTCATATCGATCTATTATGTGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTTTGGATCAATCACAAACACTTTTTTGATTATGGATCTACTACCAGAAACTCAATGTGTAATCTTAGCTTTCAATGTGTATTCCTGAATAATCTCATTTTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTCAGATTAGTCAACATTTCTATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATTCATGAAATGGGTTGGATTGATATTAGTCTGGATACAGCAAAATAATTCTATTAGATCTAATGTACTTATTAGATCTAATAAGTACCTTGTGTCAGAATTGAGAAATTCTATGGCTCGAATCTTTAGTATTCTCTTATTTATTACCTGTGTCTATTATTTAGATAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGAGGAAAGCGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGAAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTTGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGAATGGAAAGGAAAAAACAAAGGATGAATTTCACTTTAAAAGGAAGGACACGCTATCAAAATATAAAAAGACCAGTTTATGA

mRNA sequence

ATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGTCCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAATAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGAGGAAAGCGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGAAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTTGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGAATGGAAAGGAAAAAACAAAGGATGAATTTCACTTTAAAAGGAAGGACACGCTATCAAAATATAAAAAGACCAGTTTATGA

Coding sequence (CDS)

ATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGTCCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAATAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGAGGAAAGCGAGGAAGAAACAGATGTAGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGAAACAAGAGGGATCCACCGAAGAAGATACTTCTCCTTCCCTTTTTTTGGAAGAAAAGGAGGATCCGGACAAAATCGATGAAACGGAAGAGATCCGAGTGAATGGAAAGGAAAAAACAAAGGATGAATTTCACTTTAAAAGGAAGGACACGCTATCAAAATATAAAAAGACCAGTTTATGA

Protein sequence

MHEDNQFGRCGRTLLWISVHILHRALLSLPSPSSGYGRRNREENRIPSPIVTKKLKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEEDTSPSLFLEEKEDPDKIDETEEIRVNGKEKTKDEFHFKRKDTLSKYKKTSL

Homology

[Close]

BLAST of Lcy13g015560 vs. ExPASy Swiss-Prot
Match: Q0ZIW0 (Protein TIC 214 OS=Vitis vinifera OX=29760 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 7.0e-32
Identity = 80/88 (90.91%), Postives = 83/88 (94.32%), Query Frame = 0


Query: 45  RIPSPIVTKKLKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEEDTSPSLFLEE 104
           RIPSPI+TKK+KETSETEER ESEEETDVEIE TSETKGTKQ+QE STEED SPSLF EE
Sbjct: 239 RIPSPILTKKMKETSETEERGESEEETDVEIERTSETKGTKQEQERSTEEDPSPSLFSEE 298

Query: 105 KEDPDKIDETEEIRVNGKEKTKDEFHFK 133
           KEDPDKIDETEEIRVNGKEKTKDEFHFK
Sbjct: 299 KEDPDKIDETEEIRVNGKEKTKDEFHFK 326

[Close]

BLAST of Lcy13g015560 vs. ExPASy Swiss-Prot
Match: Q14FA0 (Protein TIC 214 OS=Populus alba OX=43335 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-29
Identity = 80/95 (84.21%), Postives = 83/95 (87.37%), Query Frame = 0


Query: 45  RIPSPIVTKKLKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEEDTSPSLFLEE 104
           RIPSPI TKKLKETSETEER   EEETDVEIETT ETKGTKQ+QEGSTEED S SLF EE
Sbjct: 239 RIPSPIFTKKLKETSETEER---EEETDVEIETTPETKGTKQEQEGSTEEDPSSSLFSEE 298

Query: 105 KEDPDKIDETEEIRVNGKEKTKDEFHFKRKDTLSK 140
           KE+PDKIDETEEIRVNGKEKTKDEFHF  K+T  K
Sbjct: 299 KENPDKIDETEEIRVNGKEKTKDEFHFHFKETCYK 330

[Close]

BLAST of Lcy13g015560 vs. ExPASy Swiss-Prot
Match: A4GYX4 (Protein TIC 214 OS=Populus trichocarpa OX=3694 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 1.5e-29
Identity = 80/95 (84.21%), Postives = 83/95 (87.37%), Query Frame = 0


Query: 45  RIPSPIVTKKLKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEEDTSPSLFLEE 104
           RIPSPI TKKLKETSETEER   EEETDVEIETT ETKGTKQ+QEGSTEED S SLF EE
Sbjct: 239 RIPSPIFTKKLKETSETEER---EEETDVEIETTPETKGTKQEQEGSTEEDPSSSLFSEE 298

Query: 105 KEDPDKIDETEEIRVNGKEKTKDEFHFKRKDTLSK 140
           KE+PDKIDETEEIRVNGKEKTKDEFHF  K+T  K
Sbjct: 299 KENPDKIDETEEIRVNGKEKTKDEFHFHFKETCYK 330

[Close]

BLAST of Lcy13g015560 vs. ExPASy Swiss-Prot
Match: A6MM95 (Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.8e-28
Identity = 75/85 (88.24%), Postives = 79/85 (92.94%), Query Frame = 0


Query: 45  RIPSPIVTKKLKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEEDTSPSLFLEE 104
           R+P+PIVTKKLKETS+TEER ESEEE DVEIETTSETKGTKQ+QE STEED SPSL  EE
Sbjct: 236 RMPAPIVTKKLKETSKTEERGESEEERDVEIETTSETKGTKQEQERSTEEDPSPSLCSEE 295

Query: 105 KEDPDKIDETEEIRVNGKEKTKDEF 130
           KEDPDKIDETEEIRVNGKEKTKDEF
Sbjct: 296 KEDPDKIDETEEIRVNGKEKTKDEF 320

[Close]

BLAST of Lcy13g015560 vs. ExPASy Swiss-Prot
Match: A6MMG9 (Protein TIC 214 OS=Chloranthus spicatus OX=13006 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.7e-28
Identity = 77/89 (86.52%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 45  RIPSPIVTKKLKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEEDTSPSLFLEE 104
           RIPSPIVTKKLKETSETEE  ESEEETDVEIETTSET+GT+++QEGSTEED  PSL  EE
Sbjct: 236 RIPSPIVTKKLKETSETEEGGESEEETDVEIETTSETRGTQKEQEGSTEED--PSLCSEE 295

Query: 105 KEDPDKIDETEEIRVNGKEKTKDEFHFKR 134
           KEDPDKIDETEEIRVNGKEKTKDEFH  R
Sbjct: 296 KEDPDKIDETEEIRVNGKEKTKDEFHKHR 322

[Close]

BLAST of Lcy13g015560 vs. ExPASy TrEMBL
Match: A0A2G2VYW5 (Protein TIC 214 OS=Capsicum baccatum OX=33114 GN=CQW23_21724 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 1.1e-40
Identity = 108/154 (70.13%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 1   MHEDNQFGRCGRTLLWISVHILHRALLSLPSPSSGYGRRNREENRIPSPIVTKKLKE--- 60
           MHEDNQFGRC RTLLWIS HILHRALLSLPSPSSGYGRRNREE  I SPI+TKKLKE   
Sbjct: 1   MHEDNQFGRCSRTLLWISDHILHRALLSLPSPSSGYGRRNREEGTITSPILTKKLKEAKK 60

Query: 61  ---TSETEEREESEEETDVEIETTSETKGTKQKQEGSTEED------------------T 120
               S+TEEREESEEE DV  ET SE KGTKQ+QEGSTEED                   
Sbjct: 61  LKKASKTEEREESEEERDV--ETASEMKGTKQEQEGSTEEDPYPSPSLFQEGSTEEDPYP 120

Query: 121 SPSLFLEEKEDPDKIDETEEIRVNGKEKTKDEFH 131
           SPS F EE  DPDKIDETEEIRVNGK+K KD+FH
Sbjct: 121 SPSPFSEEGSDPDKIDETEEIRVNGKDKIKDKFH 152

[Close]

BLAST of Lcy13g015560 vs. ExPASy TrEMBL
Match: A0A2G3B5T6 (Protein TIC 214 OS=Capsicum chinense OX=80379 GN=BC332_27109 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 4.3e-40
Identity = 106/154 (68.83%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 1   MHEDNQFGRCGRTLLWISVHILHRALLSLPSPSSGYGRRNREENRIPSPIVT------KK 60
           MHE+NQFG C +TLLWIS HILHRALLSLPSPSS YGRRNREE RIPSPI+T      KK
Sbjct: 1   MHEENQFGHCSQTLLWISNHILHRALLSLPSPSSSYGRRNREEGRIPSPILTKKLKEAKK 60

Query: 61  LKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEED------------------T 120
           LKE S+TEEREESEEE DV  ET SE KGTKQ+QEGSTEED                   
Sbjct: 61  LKEASKTEEREESEEERDV--ETASEMKGTKQEQEGSTEEDPYPSPSLFQEGSTEEDPYP 120

Query: 121 SPSLFLEEKEDPDKIDETEEIRVNGKEKTKDEFH 131
           SPS F EE  DPDKIDETEEIRVNGK+K KD+FH
Sbjct: 121 SPSPFSEEGSDPDKIDETEEIRVNGKDKIKDKFH 152

[Close]

BLAST of Lcy13g015560 vs. ExPASy TrEMBL
Match: A0A6N2K3S4 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS25570 PE=4 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 2.2e-36
Identity = 112/169 (66.27%), Postives = 115/169 (68.05%), Query Frame = 0


Query: 1   MHEDNQFGRCGRTLLWISVHILHRALLSLPSPSSGY---GRRNREE----NR-------- 60
           MHEDNQFGRCGRTLLWIS HILH  LLSLPSPSSGY    RRNREE    NR        
Sbjct: 1   MHEDNQFGRCGRTLLWISDHILHGTLLSLPSPSSGYRRRRRRNREEGISNNRFYYGAAHD 60

Query: 61  --------------IPSPIVTKKLKETSETEEREESEEETDVEIETTSETKGTKQKQEGS 120
                         IPSPI TKKLKETSETEER   EEETDVEIETT ETKGTKQ+QEGS
Sbjct: 61  VHIDLLCASASSIGIPSPIFTKKLKETSETEER---EEETDVEIETTPETKGTKQEQEGS 120

Query: 121 TEEDTSPSLFLEEKEDPDKIDETEEIR-VN--GKEKTKDEFHFKRKDTL 138
           TEED S SLF EEKE+PDKIDETEEIR VN  G +  KD     RK  L
Sbjct: 121 TEEDPSSSLFSEEKENPDKIDETEEIRFVNFFGNDTKKDVSVHNRKTLL 166

[Close]

BLAST of Lcy13g015560 vs. ExPASy TrEMBL
Match: A0A6M3S424 (Protein TIC 214 OS=Trichosanthes kirilowii OX=3677 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32
Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 45  RIPSPIVTKKLKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEEDTSPSLFLEE 104
           RIPSPIVTKKLKETSETEER ESEEETDVEIETTSETKGTKQ+QEGSTEEDTSPSLF EE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFSEE 295

Query: 105 KEDPDKIDETEEIRVNGKEKTKDEFHFKR 134
           KEDPDKIDETEEIRVNGKEKTKDEFHFKR
Sbjct: 296 KEDPDKIDETEEIRVNGKEKTKDEFHFKR 324

[Close]

BLAST of Lcy13g015560 vs. ExPASy TrEMBL
Match: A0A6M3RWE9 (Protein TIC 214 OS=Trichosanthes kirilowii OX=3677 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-32
Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 45  RIPSPIVTKKLKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEEDTSPSLFLEE 104
           RIPSPIVTKKLKETSETEER ESEEETDVEIETTSETKGTKQ+QEGSTEEDTSPSLF EE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFSEE 295

Query: 105 KEDPDKIDETEEIRVNGKEKTKDEFHFKR 134
           KEDPDKIDETEEIRVNGKEKTKDEFHFKR
Sbjct: 296 KEDPDKIDETEEIRVNGKEKTKDEFHFKR 324

[Close]

BLAST of Lcy13g015560 vs. NCBI nr
Match: PHT38151.1 (Protein TIC [Capsicum baccatum])

HSP 1 Score: 176.0 bits (445), Expect = 2.3e-40
Identity = 108/154 (70.13%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 1   MHEDNQFGRCGRTLLWISVHILHRALLSLPSPSSGYGRRNREENRIPSPIVTKKLKE--- 60
           MHEDNQFGRC RTLLWIS HILHRALLSLPSPSSGYGRRNREE  I SPI+TKKLKE   
Sbjct: 1   MHEDNQFGRCSRTLLWISDHILHRALLSLPSPSSGYGRRNREEGTITSPILTKKLKEAKK 60

Query: 61  ---TSETEEREESEEETDVEIETTSETKGTKQKQEGSTEED------------------T 120
               S+TEEREESEEE DV  ET SE KGTKQ+QEGSTEED                   
Sbjct: 61  LKKASKTEEREESEEERDV--ETASEMKGTKQEQEGSTEEDPYPSPSLFQEGSTEEDPYP 120

Query: 121 SPSLFLEEKEDPDKIDETEEIRVNGKEKTKDEFH 131
           SPS F EE  DPDKIDETEEIRVNGK+K KD+FH
Sbjct: 121 SPSPFSEEGSDPDKIDETEEIRVNGKDKIKDKFH 152

[Close]

BLAST of Lcy13g015560 vs. NCBI nr
Match: PHU01858.1 (hypothetical protein BC332_27109 [Capsicum chinense])

HSP 1 Score: 174.1 bits (440), Expect = 8.8e-40
Identity = 106/154 (68.83%), Postives = 113/154 (73.38%), Query Frame = 0


Query: 1   MHEDNQFGRCGRTLLWISVHILHRALLSLPSPSSGYGRRNREENRIPSPIVT------KK 60
           MHE+NQFG C +TLLWIS HILHRALLSLPSPSS YGRRNREE RIPSPI+T      KK
Sbjct: 1   MHEENQFGHCSQTLLWISNHILHRALLSLPSPSSSYGRRNREEGRIPSPILTKKLKEAKK 60

Query: 61  LKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEED------------------T 120
           LKE S+TEEREESEEE DV  ET SE KGTKQ+QEGSTEED                   
Sbjct: 61  LKEASKTEEREESEEERDV--ETASEMKGTKQEQEGSTEEDPYPSPSLFQEGSTEEDPYP 120

Query: 121 SPSLFLEEKEDPDKIDETEEIRVNGKEKTKDEFH 131
           SPS F EE  DPDKIDETEEIRVNGK+K KD+FH
Sbjct: 121 SPSPFSEEGSDPDKIDETEEIRVNGKDKIKDKFH 152

[Close]

BLAST of Lcy13g015560 vs. NCBI nr
Match: KAF9599033.1 (hypothetical protein IFM89_033378 [Coptis chinensis])

HSP 1 Score: 152.5 bits (384), Expect = 2.7e-33
Identity = 95/118 (80.51%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 24  RALLSLPSPSSGYGRRNREENRIPSPIVTKKLKETSETEEREESEEETDVEIETTSETKG 83
           RALLSLPS SSGYGRRNRE  RIPSPIVTKKLKETS+ +ER +SEEETDVEIETTSE KG
Sbjct: 95  RALLSLPSLSSGYGRRNREGGRIPSPIVTKKLKETSKKKERGKSEEETDVEIETTSEMKG 154

Query: 84  TKQKQEGSTEEDTSPSLFLEEKEDPDKIDETEEIRV--NGKEKTKDEFHFKRKDTLSK 140
           TKQ+QEGSTEED S SL  EEKEDPDKIDE EEIRV  NGKEKTKDEF+F  K+T  K
Sbjct: 155 TKQEQEGSTEEDPSLSLCSEEKEDPDKIDEMEEIRVSLNGKEKTKDEFNFHLKETYYK 212

[Close]

BLAST of Lcy13g015560 vs. NCBI nr
Match: KAG5576166.1 (hypothetical protein H5410_056300 [Solanum commersonii])

HSP 1 Score: 151.8 bits (382), Expect = 4.7e-33
Identity = 90/119 (75.63%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 1   MHEDNQFGRCGRTLLWISVHILHRALLSLPSPSSGYGRRNREENRIPSPIVTKKLKETSE 60
           MHEDNQFGRCGRTLLWIS HILHRALLSLPSPSSG+G+RNREE          + ++TSE
Sbjct: 1   MHEDNQFGRCGRTLLWISDHILHRALLSLPSPSSGFGKRNREE----------ETEKTSE 60

Query: 61  TEEREESEEETDVEIETTSETKGTKQKQEGSTEEDT--SPSLFLEEKEDPDKIDETEEI 118
            +ER ESEEE DVEIET SE KGTKQ+QEGSTEEDT  SPSLF EE  DPDKIDETEEI
Sbjct: 61  IKERVESEEERDVEIETASEMKGTKQEQEGSTEEDTYPSPSLFSEEGWDPDKIDETEEI 109

[Close]

BLAST of Lcy13g015560 vs. NCBI nr
Match: YP_009753666.1 (Ycf1 protein [Trichosanthes wallichiana] >QIT04685.1 Ycf1 protein [Trichosanthes wallichiana])

HSP 1 Score: 149.4 bits (376), Expect = 2.3e-32
Identity = 86/89 (96.63%), Postives = 87/89 (97.75%), Query Frame = 0


Query: 45  RIPSPIVTKKLKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEEDTSPSLFLEE 104
           RIPSPIVTKKLKETSETEER ESEEETDVEIETTSETKGTKQ+QEGSTEEDTSPSLF EE
Sbjct: 237 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGSTEEDTSPSLFSEE 296

Query: 105 KEDPDKIDETEEIRVNGKEKTKDEFHFKR 134
           KEDPDKIDETEEIRVNGKEKTKDEFHFKR
Sbjct: 297 KEDPDKIDETEEIRVNGKEKTKDEFHFKR 325

[Close]

BLAST of Lcy13g015560 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11
Identity = 55/102 (53.92%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 45  RIPSPIVTKKLKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEEDTSPSLFLEE 104
           RIPSPI TKKLK                     TSET GTKQ QE STEE   PSLF EE
Sbjct: 242 RIPSPIFTKKLK--------------------GTSETGGTKQDQEVSTEEAPFPSLFSEE 301

Query: 105 KEDPDKIDETEEIRVNGKEKTK--DEFHFKRKDTLSKYKKTS 145
            ED DKIDE EEIRVNGK+K    DEFH +   T   YK  S
Sbjct: 302 GEDLDKIDEMEEIRVNGKDKINKDDEFHVR---TYYNYKTVS 320

[Close]

BLAST of Lcy13g015560 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein )

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11
Identity = 55/102 (53.92%), Postives = 57/102 (55.88%), Query Frame = 0


Query: 45  RIPSPIVTKKLKETSETEEREESEEETDVEIETTSETKGTKQKQEGSTEEDTSPSLFLEE 104
           RIPSPI TKKLK                     TSET GTKQ QE STEE   PSLF EE
Sbjct: 242 RIPSPIFTKKLK--------------------GTSETGGTKQDQEVSTEEAPFPSLFSEE 301

Query: 105 KEDPDKIDETEEIRVNGKEKTK--DEFHFKRKDTLSKYKKTS 145
            ED DKIDE EEIRVNGK+K    DEFH +   T   YK  S
Sbjct: 302 GEDLDKIDEMEEIRVNGKDKINKDDEFHVR---TYYNYKTVS 320

The following BLAST results are available for this feature:

BLAST of Lcy13g015560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0ZIW0	7.0e-32	90.91	Protein TIC 214 OS=Vitis vinifera OX=29760 GN=TIC214 PE=3 SV=1	[more]
Q14FA0	1.5e-29	84.21	Protein TIC 214 OS=Populus alba OX=43335 GN=TIC214 PE=3 SV=1	[more]
A4GYX4	1.5e-29	84.21	Protein TIC 214 OS=Populus trichocarpa OX=3694 GN=TIC214 PE=3 SV=1	[more]
A6MM95	2.8e-28	88.24	Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1	[more]
A6MMG9	4.7e-28	86.52	Protein TIC 214 OS=Chloranthus spicatus OX=13006 GN=TIC214 PE=3 SV=1	[more]

BLAST of Lcy13g015560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2G2VYW5	1.1e-40	70.13	Protein TIC 214 OS=Capsicum baccatum OX=33114 GN=CQW23_21724 PE=3 SV=1	[more]
A0A2G3B5T6	4.3e-40	68.83	Protein TIC 214 OS=Capsicum chinense OX=80379 GN=BC332_27109 PE=3 SV=1	[more]
A0A6N2K3S4	2.2e-36	66.27	Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS25570 PE=4 SV=1	[more]
A0A6M3S424	1.1e-32	96.63	Protein TIC 214 OS=Trichosanthes kirilowii OX=3677 GN=ycf1 PE=3 SV=1	[more]
A0A6M3RWE9	1.1e-32	96.63	Protein TIC 214 OS=Trichosanthes kirilowii OX=3677 GN=ycf1 PE=3 SV=1	[more]

BLAST of Lcy13g015560 vs. NCBI nr


Match Name	E-value	Identity	Description
PHT38151.1	2.3e-40	70.13	Protein TIC [Capsicum baccatum]	[more]
PHU01858.1	8.8e-40	68.83	hypothetical protein BC332_27109 [Capsicum chinense]	[more]
KAF9599033.1	2.7e-33	80.51	hypothetical protein IFM89_033378 [Coptis chinensis]	[more]
KAG5576166.1	4.7e-33	75.63	hypothetical protein H5410_056300 [Solanum commersonii]	[more]
YP_009753666.1	2.3e-32	96.63	Ycf1 protein [Trichosanthes wallichiana] >QIT04685.1 Ycf1 protein [Trichosanthes...	[more]

BLAST of Lcy13g015560 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01130.1	1.4e-11	53.92	Ycf1 protein	[more]
ATCG01000.1	1.4e-11	53.92	Ycf1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PFAM	PF05758	Ycf1	coord: 45..138 e-value: 6.7E-36 score: 123.6
IPR008896	Protein TIC214	PANTHER	PTHR33163	PROTEIN TIC 214-RELATED	coord: 45..142
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 29..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 38..61
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..128
None	No IPR available	PANTHER	PTHR33163:SF13	PROTEIN TIC 214-RELATED	coord: 45..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy13g015560.1	Lcy13g015560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane