Lcy12g005480 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy12g005480
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Unknown protein
Location	Chr12: 21580549 .. 21584632 (+)
RNA-Seq Expression	Lcy12g005480
Synteny	Lcy12g005480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACGCATGAAATGTCCATTCCAATGGACACTAATGTAGCTCATATGCCACACTCTCAGCTACTACCAGCGATCACCAGTGACACGAGTCGGACAGACAACCTGATTGGGACAACTCAATCCACGATCCGTATGATTCTAACGTATGTGGAATATTTGATGTGCCCAGTTTCATTTTCAATAAGTTTGAATTCATATTTGCAGAGTTTGCTCGCTCAAAATGTGCCCCGACAGAGAACCGGTCGGAAGCGGGTTGGAACGAAGCCGTATACTCCCCCAATACAGGGGACGAAGAGAAAAAATGAAGGCTCCATTGTTCGGTATGATTGGGAACCTGTTTTAAGCATCCACGACCGCATGTATCCCGTGCCCGGTGTGGCCTTCAAGTGGGATCCAGTTGTAAGGTACTCCCCGCTACGAACCATCCCAGTTGTACTGTTCGAGGAGTTTCACCAATGGCTCTCAAATCCAAACAACGAAGAAGACACGAGGCAGTCGTTCGTGTCACATCAAATTGCAACTGAGAAGTGGGCCAGGCCCAATAAGCAGTTCTTCCGAAATGTTGCCCTCCCAAGTCAGTGGATACTCCATGACGTACGTTCCTTATACTGGACATTTCATTGTGACAAGTCAATGTCATCACTACTACAAATTTGGCCTTTGTTGACGGCTAAAAAGTATCAACTATCACATTCATTGACGCTTTTTAGAAGTTAATTGAAGTGGTATCAATAAAACTAAAGCGTCAAGATTACTGTTTTCATTGACGCTTATAGGACGTCAACAAAGATGTCTTTGTTGACGTTTATAAGCCATCAACAAAGACATTATTGACATGTTTTATCCGTCAATGATATTCATGAAGCGTCAACGTAGGCACCTTTGTAGACGTTTATTAGCCATCAAAAAATCGTATTATTGACACGTTTTATTCGTCAATGATATCCATAAAGCGTCAATGTTGCCATATTTATTGATATTTATAAACCATCAATATAAACCTATGTTGACGTTTTTTCAATGTCAATTATTGGATCAAAATTGTCAATATATACATCATTATGGTGTTTTTGATGTCATCTTTTAACCGTCAACTATACGTATTTGGAAAAAAAAAAACAAAAAAAAAACTCCCGTTGATTTTTACCCCTCCTATGCAACCTGCATTTACATAATAGTAGCTAGCTTCCAACTATAACGCCCCCAAAATTCAACCTAATATAAAGAACATTACTAAACTTCCCTCTAACCAAGTTTGATGTTATTAAAAATCTGGCACCATAACGACGTAATTATTACTAACAAAAAATTTTGGGTACCTGAAAAAAAAAAAATATGCACTTCTAAATCCAGAACATTGCCTTCATTTCACTTGACAATAGCATGACATGTTTAATACATTATATGAAGCTAACCCCAAAACTCAAGTATAAATAATACGAGTCAGATCTCGTAACAAACACATTGTTCATATAGAAATACAGAAGCAAATGAATCATAATTTCAGCCAAACATAAAATCATAATGAACTACTAGATTTCATTAAAATGGTTGTTCAAAATTTCATTATCACAACTTGCTTGCTAGCAAGCAATTATTGAATTTTTCATCTAGAAAAAGAGTTCAAAAGAAAAAATCTACAAAAACTGTATATTCAATCATAATCTCATCCAAAAATATAATAATAATAATAATGAACTAACATATTTTTGTTAACCAATAAGTTGTCGAAGATCTAAAAACTAACTAAAGACAAGCATCACATTAGGCCTTGTGGATACATTTGCACCATCTCCAATTTAGGAACTCCCGGTGAAGAAAAGCTTCAATACTAGAATGCAAATAATTCTCACTGTGAACTGGATAATCACAATTCCTCGAATATAATTCAATCTGTCAAAGATGTGAGGAAAAGAAAAAAAGGGATAATGAATAAACAGCTACACACTCAAAAATCAAAGTACTTCAAATCTGAGGAAAGACATTTTGAAAATGTGAAAGCAAGTATAGAATTACATGAACAAATGATCCAAATACAGTAAACATGAAACAGTAACTCTAAATCATACTTTTTTTTGGTTTGAAGTCGTCAAAGTCGAGAAAAACAGGAGAATCAAATAGGAAACCCTTGAATCTATTTTGTGTGTGTGTGTATCTTGTGGTGAGCGATTAGCAACAAATAAATTAACGGAATCAAACACTCCTGGAATGAACAATAAAATTGGGTAGACTGACGTATATTAAAAGGACCATTTGTTTACTGCAGTTCTTCAAATAGACCCAAACACACAAGTTAGGAAATGTTCAGTAGCATAAGTAGAATATGATTCCAGCAAATATTACATACAGTGACTGTAAGATGCAAATTATTGGAGATTCTTTAGAAAAAAGTTTGCTCACTAACCATTGTAGCAAACGATTGTTTCCTTTCAGGCTACCATACTTGCTTCAAGTACTTCCAAGTGTGTTCTGTAACAAGGAAAAGTTTGAAATTACTTGCCAATACAATGAATATATTTTATCATGAAACCAATCGTTAAAAGAAAAAGTGAAATAAAGATTGTCACTCATGAAATAAGAATATAGCATACTAGGACAGTTCATCACAAAGTCAACTAGCATACTAGGACTGCAATTTTGACTAACCAAAACATGTCAAAATAATAATACCTCTGTTTTATATAAGGTTACAACATGAAAATAGGAGAAAAAACAAGGAAACAAGAGGTGAGAATGTTGTCGAATACGACCTGATAGTTCTACCCACTCTCATTCTATTGGTTATACTACCACAAGCTAGCTACAAAATCATAAACAAACAACCAGACCATCACTTATCCAACCCAAGCATGCTTTCAAATGAACCAAAAGACACTAAACCAACTAAAGGCAGTCTCAACAAGCTACAATTAACTATAAAATTCTCATTTAGACATCATGCTTCACAATGAAACTCAACATCCTTATTTAAATCCAAAAGCAAAACTCAAGGCTTAAATCCAATTCATGCTAGCATATTAAATTCTCAAGGAAATTAGTCCAAAATATAGAACCTAGTCTGCTGACTACTTATCAACTCCAACAATCATGCAATGGGTTTAAAGCACGAAAAATATGCATCCAAATAGCTACTTACCATAGCCGAAAAGTACTTGATAAAACTATAAACTTCTTAGGTTTTAGACCCTTTAATCAACTAAAAAAAGGGAAAAACATTCTCAAATCAATAGGAGTCTAAATCAAGCATTCAGCTATGAGCCATTAAACTTAGAGACGTTTAGCACCCAAAAAACTTACCTAACCTCATACTGAAACTTGCTGCCCGGGTTTTAAATCCACTCCAACTCGACAATTGAGCCTTATAGAGATATGGGTAACTTGAATTAAACAACTAAAATCAATGGGTATTTGACTACACACAACAACCAACTCAAATTCAACCTAGAAACTCTTACTCACAGTTGGAAACGTTTAAAACCACCAGGAATTGAAGACCCACCGATCGAAATGCTGACAAGCGCAAAGGAAACGCTTGCTAGCCGTGACTATTCGCGATTTATACACCAGGATGTTGTTGTCATGAGCTAATGCACGTCAGAGATCGATTGGAGCTCGTGTCGAACAGGAAGCTCACCGGAGACACAAAGAAGAAAACGACAATGCCATTGCGTCAATCCTGCTCTCGAACGTCGACAGAGATCGAATGAGGAAAAGAGAGAGATTGCTAACAGACCACTCGTGCGGAAGACCCACTGCCGAAAACGTTGATACCGCGCGTCTCTGTGTTGTTTCAGCTCGCCGAAGAAGATGCTGTCGCTGGAGAAGACGCCGAAAATGCAACAGGAAGGACAGAGACGGATTGAGCGTGAGAGTGAACAACAGAGAGAGAGAGATCGGCTCGAAAAGAATCGCGAGAAGCTTACCCAGATTTGCATCGAATCGTTGTTACGATCTGCTGCTCGCGTCGGCGGTGGTTTGCTGCTACGACGGCGACCGGAGACGAGGAGTACTAGAGGGGCGACGGTCTATTTCTTCACGACAAGAAGAAAACAAAGATGATGGTGAAGGGGAAGGGAGGTGA

mRNA sequence

ATGGAGACGCATGAAATGTCCATTCCAATGGACACTAATGTAGCTCATATGCCACACTCTCAGCTACTACCAGCGATCACCAGTGACACGAGTCGGACAGACAACCTGATTGGGACAACTCAATCCACGATCCGTATGATTCTAACGTATGTGGAATATTTGATGTGCCCAGTTTCATTTTCAATAAGTTTGAATTCATATTTGCAGAGTTTGCTCGCTCAAAATGTGCCCCGACAGAGAACCGGTCGGAAGCGGGTTGGAACGAAGCCGTATACTCCCCCAATACAGGGGACGAAGAGAAAAAATGAAGGCTCCATTGTTCGGTATGATTGGGAACCTGTTTTAAGCATCCACGACCGCATGTATCCCGTGCCCGGTGTGGCCTTCAAGTGGGATCCAGTTGTAAGGTACTCCCCGCTACGAACCATCCCAGTTGTACTGTTCGAGGAGTTTCACCAATGGCTCTCAAATCCAAACAACGAAGAAGACACGAGGCAGTCGTTCGTGTCACATCAAATTGCAACTGAGAAGTGGGCCAGGCCCAATAAGCAGTTCTTCCGAAATGTTGCCCTCCCAAGTCAGTGGATACTCCATGACAGATCGATTGGAGCTCGTGTCGAACAGGAAGCTCACCGGAGACACAAAGAAGAAAACGACAATGCCATTGCGTCAATCCTGCTCTCGAACGTCGACAGAGATCGAATGAGGAAAAGAGAGAGATTGCTAACAGACCACTCGTGCGGAAGACCCACTGCCGAAAACGTTGATACCGCGCGTCTCTGTGTTGTTTCAGCTCGCCGAAGAAGATGCTGTCGCTGGAGAAGACGCCGAAAATGCAACAGGAAGGACAGAGACGGATTGAGCGTGAGAGTGAACAACAGAGAGAGAGAGATCGGCTCGAAAAGAATCGCGAGAAGCTTACCCAGATTTGCATCGAATCGTTGTTACGATCTGCTGCTCGCGTCGGCGGTGGTTTGCTGCTACGACGGCGACCGGAGACGAGGAGTACTAGAGGGGCGACGGTCTATTTCTTCACGACAAGAAGAAAACAAAGATGATGGTGAAGGGGAAGGGAGGTGA

Coding sequence (CDS)

ATGGAGACGCATGAAATGTCCATTCCAATGGACACTAATGTAGCTCATATGCCACACTCTCAGCTACTACCAGCGATCACCAGTGACACGAGTCGGACAGACAACCTGATTGGGACAACTCAATCCACGATCCGTATGATTCTAACGTATGTGGAATATTTGATGTGCCCAGTTTCATTTTCAATAAGTTTGAATTCATATTTGCAGAGTTTGCTCGCTCAAAATGTGCCCCGACAGAGAACCGGTCGGAAGCGGGTTGGAACGAAGCCGTATACTCCCCCAATACAGGGGACGAAGAGAAAAAATGAAGGCTCCATTGTTCGGTATGATTGGGAACCTGTTTTAAGCATCCACGACCGCATGTATCCCGTGCCCGGTGTGGCCTTCAAGTGGGATCCAGTTGTAAGGTACTCCCCGCTACGAACCATCCCAGTTGTACTGTTCGAGGAGTTTCACCAATGGCTCTCAAATCCAAACAACGAAGAAGACACGAGGCAGTCGTTCGTGTCACATCAAATTGCAACTGAGAAGTGGGCCAGGCCCAATAAGCAGTTCTTCCGAAATGTTGCCCTCCCAAGTCAGTGGATACTCCATGACAGATCGATTGGAGCTCGTGTCGAACAGGAAGCTCACCGGAGACACAAAGAAGAAAACGACAATGCCATTGCGTCAATCCTGCTCTCGAACGTCGACAGAGATCGAATGAGGAAAAGAGAGAGATTGCTAACAGACCACTCGTGCGGAAGACCCACTGCCGAAAACGTTGATACCGCGCGTCTCTGTGTTGTTTCAGCTCGCCGAAGAAGATGCTGTCGCTGGAGAAGACGCCGAAAATGCAACAGGAAGGACAGAGACGGATTGAGCGTGAGAGTGAACAACAGAGAGAGAGAGATCGGCTCGAAAAGAATCGCGAGAAGCTTACCCAGATTTGCATCGAATCGTTGTTACGATCTGCTGCTCGCGTCGGCGGTGGTTTGCTGCTACGACGGCGACCGGAGACGAGGAGTACTAGAGGGGCGACGGTCTATTTCTTCACGACAAGAAGAAAACAAAGATGATGGTGAAGGGGAAGGGAGGTGA

Protein sequence

METHEMSIPMDTNVAHMPHSQLLPAITSDTSRTDNLIGTTQSTIRMILTYVEYLMCPVSFSISLNSYLQSLLAQNVPRQRTGRKRVGTKPYTPPIQGTKRKNEGSIVRYDWEPVLSIHDRMYPVPGVAFKWDPVVRYSPLRTIPVVLFEEFHQWLSNPNNEEDTRQSFVSHQIATEKWARPNKQFFRNVALPSQWILHDRSIGARVEQEAHRRHKEENDNAIASILLSNVDRDRMRKRERLLTDHSCGRPTAENVDTARLCVVSARRRRCCRWRRRRKCNRKDRDGLSVRVNNREREIGSKRIARSLPRFASNRCYDLLLASAVVCCYDGDRRRGVLEGRRSISSRQEENKDDGEGEGR

Homology

The following BLAST results are available for this feature:

BLAST of Lcy12g005480 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g005480 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g005480 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy12g005480 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy12g005480.1	Lcy12g005480.1	mRNA