Lcy11g020540 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g020540
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRING-type domain-containing protein
LocationChr11: 48271433 .. 48274742 (+)
RNA-Seq ExpressionLcy11g020540
SyntenyLcy11g020540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CTAATCTAAACCATGATTCTGATTTGTGGATCCAAATGTTAAGGCATGTAGTAGGCAGTCTAATTCATTTGATGGTTAAGTTTCCTTCAAGTGTGGGTAACTAAAAAGCAATGAAGATTGGTGATTGATGCCAATGTTAAAGCTTACACTAAATAGACCATAAAACCAACAAAAAACACAGACATTGACTGAGATTTTTAGTACATTATTAAATCTTGTTATTCAAAAGTTATGAAGTTTATTATCAGAAAGGTCAAGAGTAACTCTCCTGTTTAGGTGCCAACCGCTTTGTGTATGACTCTTCACAATCCCAACCACTCTTCTATCCCACGCAAGATACCTGAAACACACCAAATTTACTCTCTTTTCTTCATTAAAAACATCAAGCTGATCAATTCCAATATATTCTCTTCATTGATGACAAATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCGTCGGTGTCCGAGACAGACCGAGGCTCAAGCAGGCAACCCCGTCTCCTCGCGGTGGCGATTCGAGCCTTCGACTGAGGGTGAAGGAGGAGTCTGTGGCACTTGATGATTGTGTAGCTCTTGCGAGTCCTGGAAAGGCGTTGCAGGGCGAGAGATGTTGCGTGTGCTTGTCGAGTATGGGTCGGGATGGGGAGGAGGGGATTGAAACGAGTGTTCTTCCTTGCTTCCACGAGTTTCATAAGGTATGTGTCGATCGGTGGTTCGAGGAGTGTCGGAGAACTTGTCCGATATGTCGGTATTCGATGGAAGGTGGAGAGAATAGTCATAAGAATGGGAGTCAGATACTCACAGATGAGATGGTTATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGAGCACTTTTCGTTTGTTAGATCCTCCAAAAGCACTTCAAGCTTGGCAGTGCTTCCTTTTGAGATCCCAACCAGGTAAAATCAATATGATTTTGACTAAATGTCAGTTGGATGGCTCTAGCTTCTTCACAATATCACTATTGAGTGTTATACTTTTAGGATTTTTTGTTTGTTTCTTTTTTAAAATAAAGTTTGTTTGTATATAAGTTAAAAGAAGTGGAGCCATTCAAATTCATGTCTAATCTTTTAGTGTTGGGGATGAGAGATTCATAAGCTAAAATTCCCAACTTTTTAAAGCAATTATGCCTCAAGATTTAGTGGCTAATATGAATGAAAGCCACTAATCATTAATTTTGCAGCCAGTAAAAGTGGTTTACCAACCCCCAATTTTCTTAACCCCATAAGTGGTTGGGCCTTTAGCAAGGCCCACATTGTGACATCATCATAGCAACCCCATGGTTGATTTTAGGCAATGTTTGGTAATTTGGAAATAGGATGATGCTACATGTGCTTTTGGGTGCATTAAATCTTACTTTTTTTTTGTTTGTTATTTTTTTATTCAACGATTGCGTATTGAGAGATTAAGCCATCAACTTTTGAAATAGTAATAGGTGCGAGCTGCGTTTGAATCGATGATTTGTTTGTTTTAACACAATATATATGAGTTAGTCTCGACTAATTTCATAGGACAATCATTTGACTCTCTCTATATTTATATATATTATGAGTGTTTGGACTAGTTGATGCACACTTTAACTAATCTCTCGGGACAACTACCTACAACTATAACAATTAGTTGCTAAAAAACTTGTAGGGTTTTATCCCAAGTATATAGGTTTTCTTTTTCTTTCTAAGAATTACTCCCACAATTTTATTTTGGGATCCCTCATCTCCTCTTTCAATTATATTATCTAAAGTTAGAAATCAATCATTCTGATTGTTACTTTAAACATCTTTTTTATGTTATTAGCCTTTCAGCACGATTGAGACGTGTGGTATTTCTTGACATTAGAATAAAAAATTATAATTGCAATCCATGAGATTTGGTTCGATTAAGTTTATCGATTCATTTAGAACCAAATCGAACCAACTAGGGTTCGTTTGTTATTGGTATTATTTATTAAACAAAGGGAATATCATAGGGCTTACTTTCTCTGCCGCATGGCTCCTACCTACGCCTGAGGCTGAGCATCATCACAGCCTATGATTGACATGAAAGTGTCTTATTCATTTTCCAATATTGCTATTTTCTTTTTATCTCTCATTTTTAATAAAAATATGTTTTTCCCTCCATTATTATATGCATTATTTAAGGCACGATCGGTAAGAAAGCGTTTTGAGTGCGGGTTCGACATCTTAAGCCTGAAGACTATAAGATAGTTTGAAAGTGTGCGGAGATTGGGAGAGCTTAAGAAGCTTGGATTTTGAAAAGCTGTGCTTGGGGTTTTGGAAGTTTGGAATTTAGAATCTATGTTTAGGGTGCAAAGATTTATTTCAATATATATGATATCATGAATAAGTAAAGATGTCGATCTTTAACTTTTTCTTGTACTTGTTCACGACATTTACTTCATACATATAGTAAATTGGTAAAAAAAATTGATCGATATATGTTGTTTTGTCGAGAGATAATTGGGTCTCCCTAATGTTCAAACACTGTCCTTAGGAGTCTTTAAGAGAGTGCAATGTTTTCGTGTTAGTTGAAATATTAAGTTAGAGTATCAAATCTTAATTACATTCGTTGTAACTTCCAATGATATTTATATGAATATAAGAAAAATGCAAAATTACTTCTGACCAAGTATATCGTATTTATTAAAAAAAACCGATATGGACACATTAAAAATTATATTATTTTATTATGTCATTGTTTCAAAATTTTATATAAATTAAAGGAAAACCCATGTCTATCTATAAGAAGCAATTAACAAATTATTTTAACAAAGTTTAACATTGAGTTAATGTTTATGTTTTTAACCTTTTCTTATAGGGGAGGGACAAAGCTTTTTCACCTTAGACATGGGAGGAAAAACAAAACTAAAGGATAAAGAGAAGGACAATAATAAAACCACCTAACCTAAGAATGACACAAGAAAAGTTAATGTAGTTATATGACCTACACTACATTTTCACCCCATTTCACATCTAAAAACCTCAATTTCTCTTCTTTTCTCTCTCTCCTCTTTACCCGACAAAGGTACGATGAAAAACTTTAAATTAACTAGACTTTATCAATTGAATTGTTATTCATGAATAAGTTATGATGATCTGGTAATAAGACGTTAGAGGAGAGAGTGAAAATAATTATCTAAACATCTTTTGGATGCTACTATCAACTTTCACGAGTAAAATTTAGGATCATAAAAAGTGGCTGTCAATCTTATAAAACTAATAGTATAGAATAATCAATCATGTTGTGTCAGTCATATTAAATAATTTCTCAACTACTTT

mRNA sequence

CTAATCTAAACCATGATTCTGATTTGTGGATCCAAATGTTAAGGCATGTAGTAGGCAGTCTAATTCATTTGATGGTTAAGTTTCCTTCAAGTGTGGGTAACTAAAAAGCAATGAAGATTGGTGATTGATGCCAATGTTAAAGCTTACACTAAATAGACCATAAAACCAACAAAAAACACAGACATTGACTGAGATTTTTAGTACATTATTAAATCTTGTTATTCAAAAGTTATGAAGTTTATTATCAGAAAGGTCAAGAGTAACTCTCCTGTTTAGGTGCCAACCGCTTTGTGTATGACTCTTCACAATCCCAACCACTCTTCTATCCCACGCAAGATACCTGAAACACACCAAATTTACTCTCTTTTCTTCATTAAAAACATCAAGCTGATCAATTCCAATATATTCTCTTCATTGATGACAAATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCGTCGGTGTCCGAGACAGACCGAGGCTCAAGCAGGCAACCCCGTCTCCTCGCGGTGGCGATTCGAGCCTTCGACTGAGGGTGAAGGAGGAGTCTGTGGCACTTGATGATTGTGTAGCTCTTGCGAGTCCTGGAAAGGCGTTGCAGGGCGAGAGATGTTGCGTGTGCTTGTCGAGTATGGGTCGGGATGGGGAGGAGGGGATTGAAACGAGTGTTCTTCCTTGCTTCCACGAGTTTCATAAGGTATGTGTCGATCGGTGGTTCGAGGAGTGTCGGAGAACTTGTCCGATATGTCGGTATTCGATGGAAGGTGGAGAGAATAGTCATAAGAATGGGAGTCAGATACTCACAGATGAGATGGTTATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGAGCACTTTTCGTTTGTTAGATCCTCCAAAAGCACTTCAAGCTTGGCAGTGCTTCCTTTTGAGATCCCAACCAGGTAAAATCAATATGATTTTGACTAAATGTCAGTTGGATGGCTCTAGCTTCTTCACAATATCACTATTGAGTGTTATACTTTTAGGATTTTTTGTTTGTTTCTTTTTTAAAATAAAGTTTGTTTGTATATAAGTTAAAAGAAGTGGAGCCATTCAAATTCATGTCTAATCTTTTAGTGTTGGGGATGAGAGATTCATAAGCTAAAATTCCCAACTTTTTAAAGCAATTATGCCTCAAGATTTAGTGGCTAATATGAATGAAAGCCACTAATCATTAATTTTGCAGCCAGTAAAAGTGGTTTACCAACCCCCAATTTTCTTAACCCCATAAGTGGTTGGGCCTTTAGCAAGGCCCACATTGTGACATCATCATAGCAACCCCATGGTTGATTTTAGGCAATGTTTGGTAATTTGGAAATAGGATGATGCTACATGTGCTTTTGGGTGCATTAAATCTTACTTTTTTTTTGTTTGTTATTTTTTTATTCAACGATTGCGTATTGAGAGATTAAGCCATCAACTTTTGAAATAGTAATAGGTGCGAGCTGCGTTTGAATCGATGATTTGTTTGTTTTAACACAATATATATGAGTTAGTCTCGACTAATTTCATAGGACAATCATTTGACTCTCTCTATATTTATATATATTATGAGTGTTTGGACTAGTTGATGCACACTTTAACTAATCTCTCGGGACAACTACCTACAACTATAACAATTAGTTGCTAAAAAACTTGTAGGGTTTTATCCCAAGTATATAGGTTTTCTTTTTCTTTCTAAGAATTACTCCCACAATTTTATTTTGGGATCCCTCATCTCCTCTTTCAATTATATTATCTAAAGTTAGAAATCAATCATTCTGATTGTTACTTTAAACATCTTTTTTATGTTATTAGCCTTTCAGCACGATTGAGACGTGTGGTATTTCTTGACATTAGAATAAAAAATTATAATTGCAATCCATGAGATTTGGTTCGATTAAGTTTATCGATTCATTTAGAACCAAATCGAACCAACTAGGGTTCGTTTGTTATTGGTATTATTTATTAAACAAAGGGAATATCATAGGGCTTACTTTCTCTGCCGCATGGCTCCTACCTACGCCTGAGGCTGAGCATCATCACAGCCTATGATTGACATGAAAGTGTCTTATTCATTTTCCAATATTGCTATTTTCTTTTTATCTCTCATTTTTAATAAAAATATGTTTTTCCCTCCATTATTATATGCATTATTTAAGGCACGATCGGTAAGAAAGCGTTTTGAGTGCGGGTTCGACATCTTAAGCCTGAAGACTATAAGATAGTTTGAAAGTGTGCGGAGATTGGGAGAGCTTAAGAAGCTTGGATTTTGAAAAGCTGTGCTTGGGGTTTTGGAAGTTTGGAATTTAGAATCTATGTTTAGGGTGCAAAGATTTATTTCAATATATATGATATCATGAATAAGTAAAGATGTCGATCTTTAACTTTTTCTTGTACTTGTTCACGACATTTACTTCATACATATAGTAAATTGGTAAAAAAAATTGATCGATATATGTTGTTTTGTCGAGAGATAATTGGGTCTCCCTAATGTTCAAACACTGTCCTTAGGAGTCTTTAAGAGAGTGCAATGTTTTCGTGTTAGTTGAAATATTAAGTTAGAGTATCAAATCTTAATTACATTCGTTGTAACTTCCAATGATATTTATATGAATATAAGAAAAATGCAAAATTACTTCTGACCAAGTATATCGTATTTATTAAAAAAAACCGATATGGACACATTAAAAATTATATTATTTTATTATGTCATTGTTTCAAAATTTTATATAAATTAAAGGAAAACCCATGTCTATCTATAAGAAGCAATTAACAAATTATTTTAACAAAGTTTAACATTGAGTTAATGTTTATGTTTTTAACCTTTTCTTATAGGGGAGGGACAAAGCTTTTTCACCTTAGACATGGGAGGAAAAACAAAACTAAAGGATAAAGAGAAGGACAATAATAAAACCACCTAACCTAAGAATGACACAAGAAAAGTTAATGTAGTTATATGACCTACACTACATTTTCACCCCATTTCACATCTAAAAACCTCAATTTCTCTTCTTTTCTCTCTCTCCTCTTTACCCGACAAAGGTACGATGAAAAACTTTAAATTAACTAGACTTTATCAATTGAATTGTTATTCATGAATAAGTTATGATGATCTGGTAATAAGACGTTAGAGGAGAGAGTGAAAATAATTATCTAAACATCTTTTGGATGCTACTATCAACTTTCACGAGTAAAATTTAGGATCATAAAAAGTGGCTGTCAATCTTATAAAACTAATAGTATAGAATAATCAATCATGTTGTGTCAGTCATATTAAATAATTTCTCAACTACTTT

Coding sequence (CDS)

ATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCGTCGGTGTCCGAGACAGACCGAGGCTCAAGCAGGCAACCCCGTCTCCTCGCGGTGGCGATTCGAGCCTTCGACTGAGGGTGAAGGAGGAGTCTGTGGCACTTGATGATTGTGTAGCTCTTGCGAGTCCTGGAAAGGCGTTGCAGGGCGAGAGATGTTGCGTGTGCTTGTCGAGTATGGGTCGGGATGGGGAGGAGGGGATTGAAACGAGTGTTCTTCCTTGCTTCCACGAGTTTCATAAGGTATGTGTCGATCGGTGGTTCGAGGAGTGTCGGAGAACTTGTCCGATATGTCGGTATTCGATGGAAGGTGGAGAGAATAGTCATAAGAATGGGAGTCAGATACTCACAGATGAGATGGTTATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA

Protein sequence

MVFNKVFFFFYNNFVGVRDRPRLKQATPSPRGGDSSLRLRVKEESVALDDCVALASPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGENSHKNGSQILTDEMVIWFSSFHTSGF
Homology
BLAST of Lcy11g020540 vs. ExPASy Swiss-Prot
Match: Q9H6Y7 (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.7e-07
Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 0

Query: 59  KALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGG 118
           K  Q + C +CL     + E+G +  VLPC H +H  CVD W  + R+TCPIC+  +  G
Sbjct: 223 KGDQYDVCAICLD----EYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRG 278

BLAST of Lcy11g020540 vs. ExPASy Swiss-Prot
Match: Q91XF4 (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 2.7e-07
Identity = 23/67 (34.33%), Postives = 34/67 (50.75%), Query Frame = 0

Query: 66  CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGENSHKNG 125
           C +CL     + E+G +  VLPC H +H  CVD W  + R+TCPIC+  +  G    +  
Sbjct: 230 CAICLD----EYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRGPGDEEQE 289

Query: 126 SQILTDE 133
            +    E
Sbjct: 290 EETQEQE 292

BLAST of Lcy11g020540 vs. ExPASy Swiss-Prot
Match: Q8BP31 (RING finger protein 122 OS=Mus musculus OX=10090 GN=Rnf122 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.0e-07
Identity = 40/104 (38.46%), Postives = 51/104 (49.04%), Query Frame = 0

Query: 35  SSLRLRVKEESVALDDCVALASPGKALQ--GERCCVCLSSM-GRDGEEGIETSVLPCFHE 94
           S LR + + E     + V L    K LQ  G+ C VCL    G+D     E  VLPC H 
Sbjct: 61  SKLRNQAQSERYGYKE-VVLKGDAKKLQLYGQTCAVCLEDFKGKD-----ELGVLPCQHA 120

Query: 95  FHKVCVDRWFEECRRTCPICRYSMEG-GENSHKNGSQILTDEMV 135
           FH+ C+ +W  E R  CP+C   + G  E S   G  IL DE+V
Sbjct: 121 FHRKCLVKWL-EVRCVCPMCNKPIAGPTETSQSIG--ILLDELV 155

BLAST of Lcy11g020540 vs. ExPASy Swiss-Prot
Match: Q5XIL0 (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 6.0e-07
Identity = 21/53 (39.62%), Postives = 31/53 (58.49%), Query Frame = 0

Query: 66  CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGG 119
           C +CL     + E+G +  +LPC H +H  CVD W  + R+TCPIC+  +  G
Sbjct: 230 CAICLD----EYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPVHRG 278

BLAST of Lcy11g020540 vs. ExPASy Swiss-Prot
Match: Q68DV7 (E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens OX=9606 GN=RNF43 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.8e-07
Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 0

Query: 66  CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGEN 121
           C +CL        EG E  V+ C HEFH+ CVD W  +  RTCP+C +++  G++
Sbjct: 272 CAICLEEF----SEGQELRVISCLHEFHRNCVDPWLHQ-HRTCPLCMFNITEGDS 321

BLAST of Lcy11g020540 vs. ExPASy TrEMBL
Match: A0A0A0L4W7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 PE=4 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 6.8e-54
Identity = 106/150 (70.67%), Postives = 119/150 (79.33%), Query Frame = 0

Query: 1   MVFNKVFFFFYNNFVGVRDRPRLKQATPSPRGGDSSLRLRVKEESVALDDC--VALASPG 60
           M+FNKVFFFFYNN +G R RPR KQATP PR G+SSLR       +  DDC  +AL+S  
Sbjct: 1   MIFNKVFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLR------PLPTDDCTILALSSLE 60

Query: 61  KALQGERCCVCLSSMG---RDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSM 120
           KAL+GE CCVCLSSMG   RDG++G+ TSVLPC HEFHKVCV+RWFEECRRTCPICRYSM
Sbjct: 61  KALEGETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSM 120

Query: 121 EGGENSHKNGSQILTDEMVIWFSSFHTSGF 146
           EGG +     +QILTDEMVIWFSSFHTSGF
Sbjct: 121 EGGGSHEDETNQILTDEMVIWFSSFHTSGF 144

BLAST of Lcy11g020540 vs. ExPASy TrEMBL
Match: A0A6J1CW69 (E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC111014786 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 2.2e-52
Identity = 107/146 (73.29%), Postives = 120/146 (82.19%), Query Frame = 0

Query: 1   MVFNKVFFFFYNNFVGVRDRPRLKQATPSPRGGDSSLRLRVKEESVALDDCVALASPGKA 60
           MVFN+VFFFFY NF+G R RP+LKQ T  P GGDS+LR  V++ES  + DCV L+S GKA
Sbjct: 1   MVFNRVFFFFY-NFIGFRGRPKLKQKTLLPHGGDSTLRQMVEDES-RIPDCVTLSSSGKA 60

Query: 61  LQGER-CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGE 120
           L+GE  CCVCLSS+    EEGIETSVLPC HEFHKVCVDRWFEE RRTCPICRYSMEG  
Sbjct: 61  LEGEMCCCVCLSSI----EEGIETSVLPCLHEFHKVCVDRWFEERRRTCPICRYSMEGAG 120

Query: 121 NSHKNGSQILTDEMVIWFSSFHTSGF 146
             ++NG+QILTDEMVIWFSSFHTSGF
Sbjct: 121 QGNENGTQILTDEMVIWFSSFHTSGF 140

BLAST of Lcy11g020540 vs. ExPASy TrEMBL
Match: A0A5D3CJ45 (E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00530 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.6e-50
Identity = 109/155 (70.32%), Postives = 122/155 (78.71%), Query Frame = 0

Query: 1   MVFNKVFFFFYNNFVGVRDRP-RLKQATPSPRGGDSSLRLRVKEESVALDDC--VALASP 60
           MVFNKVFFFFYNNF+G R RP R KQATP P GG+SSLR       +  DDC  +AL+S 
Sbjct: 1   MVFNKVFFFFYNNFIGFRSRPTRFKQATPLPHGGNSSLR------PMPTDDCTIIALSSL 60

Query: 61  GKALQGERCCVCLSSMGR---DGEEGI--ETSVLPCFHEFHKVCVDRWFEECRRTCPICR 120
            KAL+GE CCVCLSSMG    DG++G+   TSVLPC HEFHKVCV+RWFEECRRTCPICR
Sbjct: 61  EKALEGETCCVCLSSMGNTDGDGDKGVGNGTSVLPCLHEFHKVCVERWFEECRRTCPICR 120

Query: 121 YSME-GGENSHKN-GSQILTDEMVIWFSSFHTSGF 146
           YSME GG  SH++  +QILTDEMVIWFSSFHTSGF
Sbjct: 121 YSMEGGGGGSHEDETNQILTDEMVIWFSSFHTSGF 149

BLAST of Lcy11g020540 vs. ExPASy TrEMBL
Match: W9SMW3 (E3 ubiquitin-protein ligase Arkadia OS=Morus notabilis OX=981085 GN=L484_026635 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 2.1e-26
Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 0

Query: 1   MVFNKVFFFFYNNFVGVRDRPRLKQATPSPRGGDSSLRLRVKEESVALDDCVALASPGKA 60
           MV NK F     NF+ ++ +PRLK+A  S    + ++ L+++E    LD+  A +S G  
Sbjct: 1   MVLNK-FLSVICNFISLKGQPRLKEAPASWEVIEPNVELKLEE---GLDESAAESSTG-- 60

Query: 61  LQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGEN 120
            +GE CCVCLS++    EEG ETS+LPC H+FHK CV+RWF  C++TCPICR+SME  E+
Sbjct: 61  AEGEFCCVCLSTL---EEEGEETSLLPCQHKFHKDCVERWFSLCKKTCPICRFSME--ED 120

Query: 121 SHKNGSQILTDEMVIWFSSFHTSGF 146
               G ++LT+EMVI+FSSFH +GF
Sbjct: 121 KCYEG-EVLTEEMVIYFSSFHAAGF 133

BLAST of Lcy11g020540 vs. ExPASy TrEMBL
Match: A0A803PEM7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25
Identity = 64/145 (44.14%), Postives = 91/145 (62.76%), Query Frame = 0

Query: 1   MVFNKVFFFFYNNFVGVRDRPRLKQATPSPRGGDSSLRLRVKEESVALDDCVALASPGKA 60
           MVFN +    YNNF+ ++ +PR+K+   S    + ++  +V E   AL +    +  G  
Sbjct: 1   MVFNSLLSTLYNNFMSLKPQPRMKEPPASCDVDEVNVEHKVDE---ALAESATDSITG-- 60

Query: 61  LQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGEN 120
            +GE CCVCLS +     EG ETS+LPC HEFHK CV+RWF  CR+TCP+CR++ME  E+
Sbjct: 61  -EGEFCCVCLSRL-----EGEETSILPCMHEFHKECVERWFHACRKTCPVCRFAME--ED 120

Query: 121 SHKNGSQILTDEMVIWFSSFHTSGF 146
                 +  T+EM+I+FSSFH +GF
Sbjct: 121 KCYYAGEFFTEEMLIYFSSFHAAGF 132

BLAST of Lcy11g020540 vs. NCBI nr
Match: KAG6577791.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 220.3 bits (560), Expect = 1.1e-53
Identity = 107/148 (72.30%), Postives = 121/148 (81.76%), Query Frame = 0

Query: 1   MVFNKVFFFFYNNFVGVRDRPRLKQATPSPRGGDSSLRLRVKEESVALDDCV-ALASPGK 60
           MVFNK+FFFFYNN +G R  P LKQATP PR  DSSLR       +  DDCV AL+SP K
Sbjct: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLR------PMTPDDCVAALSSPEK 60

Query: 61  ALQGERCCVCLSSMG-RDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGG 120
           AL+GE CCVCLS MG +D +EGI TSVLPC HEFHK+C+DRWFEECRRTCPICRYSMEGG
Sbjct: 61  ALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGG 120

Query: 121 ENSHKNGS-QILTDEMVIWFSSFHTSGF 146
            N+H++GS ++LTDEMVIWFSSFHTSGF
Sbjct: 121 GNNHEDGSNEMLTDEMVIWFSSFHTSGF 142

BLAST of Lcy11g020540 vs. NCBI nr
Match: KAG7015830.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 219.9 bits (559), Expect = 1.4e-53
Identity = 107/148 (72.30%), Postives = 120/148 (81.08%), Query Frame = 0

Query: 1   MVFNKVFFFFYNNFVGVRDRPRLKQATPSPRGGDSSLRLRVKEESVALDDCV-ALASPGK 60
           MVFNK+FFFFYNN +G R  P LKQATP PR  DSSLR          DDCV AL+SP K
Sbjct: 1   MVFNKLFFFFYNNLIGFRTSPTLKQATPLPRSADSSLR------PTTPDDCVAALSSPEK 60

Query: 61  ALQGERCCVCLSSMG-RDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGG 120
           AL+GE CCVCLS MG +D +EGI TSVLPC HEFHK+C+DRWFEECRRTCPICRYSMEGG
Sbjct: 61  ALEGETCCVCLSCMGNKDKDEGIGTSVLPCSHEFHKICLDRWFEECRRTCPICRYSMEGG 120

Query: 121 ENSHKNGS-QILTDEMVIWFSSFHTSGF 146
            N+H++GS ++LTDEMVIWFSSFHTSGF
Sbjct: 121 GNNHEDGSNEMLTDEMVIWFSSFHTSGF 142

BLAST of Lcy11g020540 vs. NCBI nr
Match: XP_022145297.1 (E3 ubiquitin-protein ligase SDIR1-like [Momordica charantia])

HSP 1 Score: 214.9 bits (546), Expect = 4.5e-52
Identity = 107/146 (73.29%), Postives = 120/146 (82.19%), Query Frame = 0

Query: 1   MVFNKVFFFFYNNFVGVRDRPRLKQATPSPRGGDSSLRLRVKEESVALDDCVALASPGKA 60
           MVFN+VFFFFY NF+G R RP+LKQ T  P GGDS+LR  V++ES  + DCV L+S GKA
Sbjct: 1   MVFNRVFFFFY-NFIGFRGRPKLKQKTLLPHGGDSTLRQMVEDES-RIPDCVTLSSSGKA 60

Query: 61  LQGER-CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGE 120
           L+GE  CCVCLSS+    EEGIETSVLPC HEFHKVCVDRWFEE RRTCPICRYSMEG  
Sbjct: 61  LEGEMCCCVCLSSI----EEGIETSVLPCLHEFHKVCVDRWFEERRRTCPICRYSMEGAG 120

Query: 121 NSHKNGSQILTDEMVIWFSSFHTSGF 146
             ++NG+QILTDEMVIWFSSFHTSGF
Sbjct: 121 QGNENGTQILTDEMVIWFSSFHTSGF 140

BLAST of Lcy11g020540 vs. NCBI nr
Match: XP_038906276.1 (E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida])

HSP 1 Score: 214.2 bits (544), Expect = 7.7e-52
Identity = 110/153 (71.90%), Postives = 118/153 (77.12%), Query Frame = 0

Query: 1   MVFNKVFFFFYNNFVGVRDRPRLKQATPSPRGGDSSLRLRVKEESVALDDC--VALASPG 60
           MVFNKVFFFFYNNF+G R R R KQATP P GG+ SLR       +  DDC  V L+SP 
Sbjct: 1   MVFNKVFFFFYNNFMGFRSRLRCKQATPLPHGGNLSLR------PITPDDCAIVTLSSPE 60

Query: 61  KALQGERCCVCLSSMG-----RDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRY 120
           KAL+GE CCVCLSSMG     RD   G  TSVLPC HEFHKVCVDRWFEECRRTCPICRY
Sbjct: 61  KALEGETCCVCLSSMGNKDGDRDKGVGTSTSVLPCLHEFHKVCVDRWFEECRRTCPICRY 120

Query: 121 SMEGGENSHKNG-SQILTDEMVIWFSSFHTSGF 146
           SMEGG  SH++G +QILTDEMVIWFSSFHTSGF
Sbjct: 121 SMEGG-GSHEDGTNQILTDEMVIWFSSFHTSGF 146

BLAST of Lcy11g020540 vs. NCBI nr
Match: KAE8649999.1 (hypothetical protein Csa_010276, partial [Cucumis sativus])

HSP 1 Score: 210.7 bits (535), Expect = 8.5e-51
Identity = 102/145 (70.34%), Postives = 114/145 (78.62%), Query Frame = 0

Query: 6   VFFFFYNNFVGVRDRPRLKQATPSPRGGDSSLRLRVKEESVALDDC--VALASPGKALQG 65
           VFFFFYNN +G R RPR KQATP PR G+SSLR       +  DDC  +AL+S  KAL+G
Sbjct: 1   VFFFFYNNLIGFRSRPRFKQATPLPRSGNSSLR------PLPTDDCTILALSSLEKALEG 60

Query: 66  ERCCVCLSSMG---RDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGEN 125
           E CCVCLSSMG   RDG++G+ TSVLPC HEFHKVCV+RWFEECRRTCPICRYSMEGG +
Sbjct: 61  ETCCVCLSSMGNTDRDGDKGVGTSVLPCLHEFHKVCVERWFEECRRTCPICRYSMEGGGS 120

Query: 126 SHKNGSQILTDEMVIWFSSFHTSGF 146
                +QILTDEMVIWFSSFHTSGF
Sbjct: 121 HEDETNQILTDEMVIWFSSFHTSGF 139

BLAST of Lcy11g020540 vs. TAIR 10
Match: AT3G51325.1 (RING/U-box superfamily protein )

HSP 1 Score: 71.6 bits (174), Expect = 5.7e-13
Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 0

Query: 48  LDDCVALASP----GKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEE 107
           L+  +AL  P    G+  + E C VCL  M  + ++ I++  LPC HEFH +CVD WF  
Sbjct: 4   LEKWLALLYPRVQGGEGREEECCSVCLMRM--EAKDVIKS--LPCSHEFHSLCVDTWFNV 63

Query: 108 CRR-TCPICRYSMEGGENSHKNGSQILTDEMVIWFSSFH 142
            R+  CP+CR+S           + +LTDE+++WFSSFH
Sbjct: 64  SRKICCPLCRFSPT---------TILLTDELLLWFSSFH 89

BLAST of Lcy11g020540 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein )

HSP 1 Score: 58.5 bits (140), Expect = 5.0e-09
Identity = 24/61 (39.34%), Postives = 34/61 (55.74%), Query Frame = 0

Query: 52  VALASPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPIC 111
           + L +  ++    +C +CL     + EE      LPC HEFHK CVD+W +E  R CP+C
Sbjct: 476 IKLYTKSQSEDPSQCYICLV----EYEEADSIRTLPCHHEFHKTCVDKWLKEIHRVCPLC 532

Query: 112 R 113
           R
Sbjct: 536 R 532

BLAST of Lcy11g020540 vs. TAIR 10
Match: AT4G32600.1 (RING/U-box superfamily protein )

HSP 1 Score: 54.7 bits (130), Expect = 7.3e-08
Identity = 38/124 (30.65%), Postives = 57/124 (45.97%), Query Frame = 0

Query: 19  DRPRLKQATPSPRGGDSSLRLRVKEESVALDDCVALASPG----------KALQGER--C 78
           D  + + ATP       + + ++K+     DD  +  S G          +A+ GE   C
Sbjct: 304 DLTQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGGVVAAGTDNERAISGEDAVC 363

Query: 79  CVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGENSHKNGS 131
           C+CL+    +     E   LPC H FHK CVD+W  +   +CP+C+ S  G +NS     
Sbjct: 364 CICLAKYANNE----ELRELPCSHFFHKECVDKWL-KINASCPLCK-SEVGEKNSDLTSQ 421

BLAST of Lcy11g020540 vs. TAIR 10
Match: AT3G61180.1 (RING/U-box superfamily protein )

HSP 1 Score: 54.3 bits (129), Expect = 9.5e-08
Identity = 23/57 (40.35%), Postives = 35/57 (61.40%), Query Frame = 0

Query: 66  CCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYS-MEGGENS 122
           C +CL +     E+G+E   LPC H FH +CVD+W      TCP+C+++ ++ GE S
Sbjct: 323 CSICLCAY----EDGVELRELPCRHHFHSLCVDKWL-RINATCPLCKFNILKNGEPS 374

BLAST of Lcy11g020540 vs. TAIR 10
Match: AT5G45290.2 (RING/U-box superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07
Identity = 24/62 (38.71%), Postives = 34/62 (54.84%), Query Frame = 0

Query: 52  VALASPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECR-RTCPI 111
           + L +  ++    +C +CL     + EE      LPC HEFHK CVD+W +E   R CP+
Sbjct: 476 IKLYTKSQSEDPSQCYICLV----EYEEADSIRTLPCHHEFHKTCVDKWLKEIHSRVCPL 533

Query: 112 CR 113
           CR
Sbjct: 536 CR 533

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9H6Y72.7e-0740.00E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1[more]
Q91XF42.7e-0734.33E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1[more]
Q8BP316.0e-0738.46RING finger protein 122 OS=Mus musculus OX=10090 GN=Rnf122 PE=2 SV=1[more]
Q5XIL06.0e-0739.62E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 ... [more]
Q68DV77.8e-0740.00E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens OX=9606 GN=RNF43 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0L4W76.8e-5470.67RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 P... [more]
A0A6J1CW692.2e-5273.29E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC1110... [more]
A0A5D3CJ451.6e-5070.32E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
W9SMW32.1e-2648.97E3 ubiquitin-protein ligase Arkadia OS=Morus notabilis OX=981085 GN=L484_026635 ... [more]
A0A803PEM71.3e-2544.14Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAG6577791.11.1e-5372.30Protein goliath, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7015830.11.4e-5372.30Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022145297.14.5e-5273.29E3 ubiquitin-protein ligase SDIR1-like [Momordica charantia][more]
XP_038906276.17.7e-5271.90E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida][more]
KAE8649999.18.5e-5170.34hypothetical protein Csa_010276, partial [Cucumis sativus][more]
Match NameE-valueIdentityDescription
AT3G51325.15.7e-1340.40RING/U-box superfamily protein [more]
AT5G45290.15.0e-0939.34RING/U-box superfamily protein [more]
AT4G32600.17.3e-0830.65RING/U-box superfamily protein [more]
AT3G61180.19.5e-0840.35RING/U-box superfamily protein [more]
AT5G45290.21.2e-0738.71RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 66..111
e-value: 3.2E-5
score: 33.3
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 65..112
e-value: 8.3E-9
score: 35.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 66..112
score: 11.913911
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 55..129
e-value: 5.3E-14
score: 53.1
NoneNo IPR availablePANTHERPTHR45977:SF13GB|AAF27103.1coord: 56..123
NoneNo IPR availablePANTHERPTHR45977TARGET OF ERK KINASE MPK-1coord: 56..123
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 59..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g020540.1Lcy11g020540.1mRNA