Lcy11g020540 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAATCTAAACCATGATTCTGATTTGTGGATCCAAATGTTAAGGCATGTAGTAGGCAGTCTAATTCATTTGATGGTTAAGTTTCCTTCAAGTGTGGGTAACTAAAAAGCAATGAAGATTGGTGATTGATGCCAATGTTAAAGCTTACACTAAATAGACCATAAAACCAACAAAAAACACAGACATTGACTGAGATTTTTAGTACATTATTAAATCTTGTTATTCAAAAGTTATGAAGTTTATTATCAGAAAGGTCAAGAGTAACTCTCCTGTTTAGGTGCCAACCGCTTTGTGTATGACTCTTCACAATCCCAACCACTCTTCTATCCCACGCAAGATACCTGAAACACACCAAATTTACTCTCTTTTCTTCATTAAAAACATCAAGCTGATCAATTCCAATATATTCTCTTCATTGATGACAAATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCGTCGGTGTCCGAGACAGACCGAGGCTCAAGCAGGCAACCCCGTCTCCTCGCGGTGGCGATTCGAGCCTTCGACTGAGGGTGAAGGAGGAGTCTGTGGCACTTGATGATTGTGTAGCTCTTGCGAGTCCTGGAAAGGCGTTGCAGGGCGAGAGATGTTGCGTGTGCTTGTCGAGTATGGGTCGGGATGGGGAGGAGGGGATTGAAACGAGTGTTCTTCCTTGCTTCCACGAGTTTCATAAGGTATGTGTCGATCGGTGGTTCGAGGAGTGTCGGAGAACTTGTCCGATATGTCGGTATTCGATGGAAGGTGGAGAGAATAGTCATAAGAATGGGAGTCAGATACTCACAGATGAGATGGTTATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGAGCACTTTTCGTTTGTTAGATCCTCCAAAAGCACTTCAAGCTTGGCAGTGCTTCCTTTTGAGATCCCAACCAGGTAAAATCAATATGATTTTGACTAAATGTCAGTTGGATGGCTCTAGCTTCTTCACAATATCACTATTGAGTGTTATACTTTTAGGATTTTTTGTTTGTTTCTTTTTTAAAATAAAGTTTGTTTGTATATAAGTTAAAAGAAGTGGAGCCATTCAAATTCATGTCTAATCTTTTAGTGTTGGGGATGAGAGATTCATAAGCTAAAATTCCCAACTTTTTAAAGCAATTATGCCTCAAGATTTAGTGGCTAATATGAATGAAAGCCACTAATCATTAATTTTGCAGCCAGTAAAAGTGGTTTACCAACCCCCAATTTTCTTAACCCCATAAGTGGTTGGGCCTTTAGCAAGGCCCACATTGTGACATCATCATAGCAACCCCATGGTTGATTTTAGGCAATGTTTGGTAATTTGGAAATAGGATGATGCTACATGTGCTTTTGGGTGCATTAAATCTTACTTTTTTTTTGTTTGTTATTTTTTTATTCAACGATTGCGTATTGAGAGATTAAGCCATCAACTTTTGAAATAGTAATAGGTGCGAGCTGCGTTTGAATCGATGATTTGTTTGTTTTAACACAATATATATGAGTTAGTCTCGACTAATTTCATAGGACAATCATTTGACTCTCTCTATATTTATATATATTATGAGTGTTTGGACTAGTTGATGCACACTTTAACTAATCTCTCGGGACAACTACCTACAACTATAACAATTAGTTGCTAAAAAACTTGTAGGGTTTTATCCCAAGTATATAGGTTTTCTTTTTCTTTCTAAGAATTACTCCCACAATTTTATTTTGGGATCCCTCATCTCCTCTTTCAATTATATTATCTAAAGTTAGAAATCAATCATTCTGATTGTTACTTTAAACATCTTTTTTATGTTATTAGCCTTTCAGCACGATTGAGACGTGTGGTATTTCTTGACATTAGAATAAAAAATTATAATTGCAATCCATGAGATTTGGTTCGATTAAGTTTATCGATTCATTTAGAACCAAATCGAACCAACTAGGGTTCGTTTGTTATTGGTATTATTTATTAAACAAAGGGAATATCATAGGGCTTACTTTCTCTGCCGCATGGCTCCTACCTACGCCTGAGGCTGAGCATCATCACAGCCTATGATTGACATGAAAGTGTCTTATTCATTTTCCAATATTGCTATTTTCTTTTTATCTCTCATTTTTAATAAAAATATGTTTTTCCCTCCATTATTATATGCATTATTTAAGGCACGATCGGTAAGAAAGCGTTTTGAGTGCGGGTTCGACATCTTAAGCCTGAAGACTATAAGATAGTTTGAAAGTGTGCGGAGATTGGGAGAGCTTAAGAAGCTTGGATTTTGAAAAGCTGTGCTTGGGGTTTTGGAAGTTTGGAATTTAGAATCTATGTTTAGGGTGCAAAGATTTATTTCAATATATATGATATCATGAATAAGTAAAGATGTCGATCTTTAACTTTTTCTTGTACTTGTTCACGACATTTACTTCATACATATAGTAAATTGGTAAAAAAAATTGATCGATATATGTTGTTTTGTCGAGAGATAATTGGGTCTCCCTAATGTTCAAACACTGTCCTTAGGAGTCTTTAAGAGAGTGCAATGTTTTCGTGTTAGTTGAAATATTAAGTTAGAGTATCAAATCTTAATTACATTCGTTGTAACTTCCAATGATATTTATATGAATATAAGAAAAATGCAAAATTACTTCTGACCAAGTATATCGTATTTATTAAAAAAAACCGATATGGACACATTAAAAATTATATTATTTTATTATGTCATTGTTTCAAAATTTTATATAAATTAAAGGAAAACCCATGTCTATCTATAAGAAGCAATTAACAAATTATTTTAACAAAGTTTAACATTGAGTTAATGTTTATGTTTTTAACCTTTTCTTATAGGGGAGGGACAAAGCTTTTTCACCTTAGACATGGGAGGAAAAACAAAACTAAAGGATAAAGAGAAGGACAATAATAAAACCACCTAACCTAAGAATGACACAAGAAAAGTTAATGTAGTTATATGACCTACACTACATTTTCACCCCATTTCACATCTAAAAACCTCAATTTCTCTTCTTTTCTCTCTCTCCTCTTTACCCGACAAAGGTACGATGAAAAACTTTAAATTAACTAGACTTTATCAATTGAATTGTTATTCATGAATAAGTTATGATGATCTGGTAATAAGACGTTAGAGGAGAGAGTGAAAATAATTATCTAAACATCTTTTGGATGCTACTATCAACTTTCACGAGTAAAATTTAGGATCATAAAAAGTGGCTGTCAATCTTATAAAACTAATAGTATAGAATAATCAATCATGTTGTGTCAGTCATATTAAATAATTTCTCAACTACTTT CTAATCTAAACCATGATTCTGATTTGTGGATCCAAATGTTAAGGCATGTAGTAGGCAGTCTAATTCATTTGATGGTTAAGTTTCCTTCAAGTGTGGGTAACTAAAAAGCAATGAAGATTGGTGATTGATGCCAATGTTAAAGCTTACACTAAATAGACCATAAAACCAACAAAAAACACAGACATTGACTGAGATTTTTAGTACATTATTAAATCTTGTTATTCAAAAGTTATGAAGTTTATTATCAGAAAGGTCAAGAGTAACTCTCCTGTTTAGGTGCCAACCGCTTTGTGTATGACTCTTCACAATCCCAACCACTCTTCTATCCCACGCAAGATACCTGAAACACACCAAATTTACTCTCTTTTCTTCATTAAAAACATCAAGCTGATCAATTCCAATATATTCTCTTCATTGATGACAAATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCGTCGGTGTCCGAGACAGACCGAGGCTCAAGCAGGCAACCCCGTCTCCTCGCGGTGGCGATTCGAGCCTTCGACTGAGGGTGAAGGAGGAGTCTGTGGCACTTGATGATTGTGTAGCTCTTGCGAGTCCTGGAAAGGCGTTGCAGGGCGAGAGATGTTGCGTGTGCTTGTCGAGTATGGGTCGGGATGGGGAGGAGGGGATTGAAACGAGTGTTCTTCCTTGCTTCCACGAGTTTCATAAGGTATGTGTCGATCGGTGGTTCGAGGAGTGTCGGAGAACTTGTCCGATATGTCGGTATTCGATGGAAGGTGGAGAGAATAGTCATAAGAATGGGAGTCAGATACTCACAGATGAGATGGTTATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGAGCACTTTTCGTTTGTTAGATCCTCCAAAAGCACTTCAAGCTTGGCAGTGCTTCCTTTTGAGATCCCAACCAGGTAAAATCAATATGATTTTGACTAAATGTCAGTTGGATGGCTCTAGCTTCTTCACAATATCACTATTGAGTGTTATACTTTTAGGATTTTTTGTTTGTTTCTTTTTTAAAATAAAGTTTGTTTGTATATAAGTTAAAAGAAGTGGAGCCATTCAAATTCATGTCTAATCTTTTAGTGTTGGGGATGAGAGATTCATAAGCTAAAATTCCCAACTTTTTAAAGCAATTATGCCTCAAGATTTAGTGGCTAATATGAATGAAAGCCACTAATCATTAATTTTGCAGCCAGTAAAAGTGGTTTACCAACCCCCAATTTTCTTAACCCCATAAGTGGTTGGGCCTTTAGCAAGGCCCACATTGTGACATCATCATAGCAACCCCATGGTTGATTTTAGGCAATGTTTGGTAATTTGGAAATAGGATGATGCTACATGTGCTTTTGGGTGCATTAAATCTTACTTTTTTTTTGTTTGTTATTTTTTTATTCAACGATTGCGTATTGAGAGATTAAGCCATCAACTTTTGAAATAGTAATAGGTGCGAGCTGCGTTTGAATCGATGATTTGTTTGTTTTAACACAATATATATGAGTTAGTCTCGACTAATTTCATAGGACAATCATTTGACTCTCTCTATATTTATATATATTATGAGTGTTTGGACTAGTTGATGCACACTTTAACTAATCTCTCGGGACAACTACCTACAACTATAACAATTAGTTGCTAAAAAACTTGTAGGGTTTTATCCCAAGTATATAGGTTTTCTTTTTCTTTCTAAGAATTACTCCCACAATTTTATTTTGGGATCCCTCATCTCCTCTTTCAATTATATTATCTAAAGTTAGAAATCAATCATTCTGATTGTTACTTTAAACATCTTTTTTATGTTATTAGCCTTTCAGCACGATTGAGACGTGTGGTATTTCTTGACATTAGAATAAAAAATTATAATTGCAATCCATGAGATTTGGTTCGATTAAGTTTATCGATTCATTTAGAACCAAATCGAACCAACTAGGGTTCGTTTGTTATTGGTATTATTTATTAAACAAAGGGAATATCATAGGGCTTACTTTCTCTGCCGCATGGCTCCTACCTACGCCTGAGGCTGAGCATCATCACAGCCTATGATTGACATGAAAGTGTCTTATTCATTTTCCAATATTGCTATTTTCTTTTTATCTCTCATTTTTAATAAAAATATGTTTTTCCCTCCATTATTATATGCATTATTTAAGGCACGATCGGTAAGAAAGCGTTTTGAGTGCGGGTTCGACATCTTAAGCCTGAAGACTATAAGATAGTTTGAAAGTGTGCGGAGATTGGGAGAGCTTAAGAAGCTTGGATTTTGAAAAGCTGTGCTTGGGGTTTTGGAAGTTTGGAATTTAGAATCTATGTTTAGGGTGCAAAGATTTATTTCAATATATATGATATCATGAATAAGTAAAGATGTCGATCTTTAACTTTTTCTTGTACTTGTTCACGACATTTACTTCATACATATAGTAAATTGGTAAAAAAAATTGATCGATATATGTTGTTTTGTCGAGAGATAATTGGGTCTCCCTAATGTTCAAACACTGTCCTTAGGAGTCTTTAAGAGAGTGCAATGTTTTCGTGTTAGTTGAAATATTAAGTTAGAGTATCAAATCTTAATTACATTCGTTGTAACTTCCAATGATATTTATATGAATATAAGAAAAATGCAAAATTACTTCTGACCAAGTATATCGTATTTATTAAAAAAAACCGATATGGACACATTAAAAATTATATTATTTTATTATGTCATTGTTTCAAAATTTTATATAAATTAAAGGAAAACCCATGTCTATCTATAAGAAGCAATTAACAAATTATTTTAACAAAGTTTAACATTGAGTTAATGTTTATGTTTTTAACCTTTTCTTATAGGGGAGGGACAAAGCTTTTTCACCTTAGACATGGGAGGAAAAACAAAACTAAAGGATAAAGAGAAGGACAATAATAAAACCACCTAACCTAAGAATGACACAAGAAAAGTTAATGTAGTTATATGACCTACACTACATTTTCACCCCATTTCACATCTAAAAACCTCAATTTCTCTTCTTTTCTCTCTCTCCTCTTTACCCGACAAAGGTACGATGAAAAACTTTAAATTAACTAGACTTTATCAATTGAATTGTTATTCATGAATAAGTTATGATGATCTGGTAATAAGACGTTAGAGGAGAGAGTGAAAATAATTATCTAAACATCTTTTGGATGCTACTATCAACTTTCACGAGTAAAATTTAGGATCATAAAAAGTGGCTGTCAATCTTATAAAACTAATAGTATAGAATAATCAATCATGTTGTGTCAGTCATATTAAATAATTTCTCAACTACTTT ATGGTTTTCAACAAGGTCTTCTTCTTCTTCTACAACAACTTCGTCGGTGTCCGAGACAGACCGAGGCTCAAGCAGGCAACCCCGTCTCCTCGCGGTGGCGATTCGAGCCTTCGACTGAGGGTGAAGGAGGAGTCTGTGGCACTTGATGATTGTGTAGCTCTTGCGAGTCCTGGAAAGGCGTTGCAGGGCGAGAGATGTTGCGTGTGCTTGTCGAGTATGGGTCGGGATGGGGAGGAGGGGATTGAAACGAGTGTTCTTCCTTGCTTCCACGAGTTTCATAAGGTATGTGTCGATCGGTGGTTCGAGGAGTGTCGGAGAACTTGTCCGATATGTCGGTATTCGATGGAAGGTGGAGAGAATAGTCATAAGAATGGGAGTCAGATACTCACAGATGAGATGGTTATATGGTTTTCTTCTTTCCACACCTCTGGTTTTTGA MVFNKVFFFFYNNFVGVRDRPRLKQATPSPRGGDSSLRLRVKEESVALDDCVALASPGKALQGERCCVCLSSMGRDGEEGIETSVLPCFHEFHKVCVDRWFEECRRTCPICRYSMEGGENSHKNGSQILTDEMVIWFSSFHTSGF Homology
BLAST of Lcy11g020540 vs. ExPASy Swiss-Prot
Match: Q9H6Y7 (E3 ubiquitin-protein ligase RNF167 OS=Homo sapiens OX=9606 GN=RNF167 PE=1 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.7e-07 Identity = 24/60 (40.00%), Postives = 34/60 (56.67%), Query Frame = 0
BLAST of Lcy11g020540 vs. ExPASy Swiss-Prot
Match: Q91XF4 (E3 ubiquitin-protein ligase RNF167 OS=Mus musculus OX=10090 GN=Rnf167 PE=2 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 2.7e-07 Identity = 23/67 (34.33%), Postives = 34/67 (50.75%), Query Frame = 0
BLAST of Lcy11g020540 vs. ExPASy Swiss-Prot
Match: Q8BP31 (RING finger protein 122 OS=Mus musculus OX=10090 GN=Rnf122 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 6.0e-07 Identity = 40/104 (38.46%), Postives = 51/104 (49.04%), Query Frame = 0
BLAST of Lcy11g020540 vs. ExPASy Swiss-Prot
Match: Q5XIL0 (E3 ubiquitin-protein ligase RNF167 OS=Rattus norvegicus OX=10116 GN=Rnf167 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 6.0e-07 Identity = 21/53 (39.62%), Postives = 31/53 (58.49%), Query Frame = 0
BLAST of Lcy11g020540 vs. ExPASy Swiss-Prot
Match: Q68DV7 (E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens OX=9606 GN=RNF43 PE=1 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 7.8e-07 Identity = 22/55 (40.00%), Postives = 32/55 (58.18%), Query Frame = 0
BLAST of Lcy11g020540 vs. ExPASy TrEMBL
Match: A0A0A0L4W7 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G002620 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 6.8e-54 Identity = 106/150 (70.67%), Postives = 119/150 (79.33%), Query Frame = 0
BLAST of Lcy11g020540 vs. ExPASy TrEMBL
Match: A0A6J1CW69 (E3 ubiquitin-protein ligase SDIR1-like OS=Momordica charantia OX=3673 GN=LOC111014786 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.2e-52 Identity = 107/146 (73.29%), Postives = 120/146 (82.19%), Query Frame = 0
BLAST of Lcy11g020540 vs. ExPASy TrEMBL
Match: A0A5D3CJ45 (E3 ubiquitin-protein ligase RNF13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G00530 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.6e-50 Identity = 109/155 (70.32%), Postives = 122/155 (78.71%), Query Frame = 0
BLAST of Lcy11g020540 vs. ExPASy TrEMBL
Match: W9SMW3 (E3 ubiquitin-protein ligase Arkadia OS=Morus notabilis OX=981085 GN=L484_026635 PE=4 SV=1) HSP 1 Score: 128.6 bits (322), Expect = 2.1e-26 Identity = 71/145 (48.97%), Postives = 99/145 (68.28%), Query Frame = 0
BLAST of Lcy11g020540 vs. ExPASy TrEMBL
Match: A0A803PEM7 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 1.3e-25 Identity = 64/145 (44.14%), Postives = 91/145 (62.76%), Query Frame = 0
BLAST of Lcy11g020540 vs. NCBI nr
Match: KAG6577791.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 220.3 bits (560), Expect = 1.1e-53 Identity = 107/148 (72.30%), Postives = 121/148 (81.76%), Query Frame = 0
BLAST of Lcy11g020540 vs. NCBI nr
Match: KAG7015830.1 (Protein goliath, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 219.9 bits (559), Expect = 1.4e-53 Identity = 107/148 (72.30%), Postives = 120/148 (81.08%), Query Frame = 0
BLAST of Lcy11g020540 vs. NCBI nr
Match: XP_022145297.1 (E3 ubiquitin-protein ligase SDIR1-like [Momordica charantia]) HSP 1 Score: 214.9 bits (546), Expect = 4.5e-52 Identity = 107/146 (73.29%), Postives = 120/146 (82.19%), Query Frame = 0
BLAST of Lcy11g020540 vs. NCBI nr
Match: XP_038906276.1 (E3 ubiquitin-protein ligase RNF167-like [Benincasa hispida]) HSP 1 Score: 214.2 bits (544), Expect = 7.7e-52 Identity = 110/153 (71.90%), Postives = 118/153 (77.12%), Query Frame = 0
BLAST of Lcy11g020540 vs. NCBI nr
Match: KAE8649999.1 (hypothetical protein Csa_010276, partial [Cucumis sativus]) HSP 1 Score: 210.7 bits (535), Expect = 8.5e-51 Identity = 102/145 (70.34%), Postives = 114/145 (78.62%), Query Frame = 0
BLAST of Lcy11g020540 vs. TAIR 10
Match: AT3G51325.1 (RING/U-box superfamily protein ) HSP 1 Score: 71.6 bits (174), Expect = 5.7e-13 Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 0
BLAST of Lcy11g020540 vs. TAIR 10
Match: AT5G45290.1 (RING/U-box superfamily protein ) HSP 1 Score: 58.5 bits (140), Expect = 5.0e-09 Identity = 24/61 (39.34%), Postives = 34/61 (55.74%), Query Frame = 0
BLAST of Lcy11g020540 vs. TAIR 10
Match: AT4G32600.1 (RING/U-box superfamily protein ) HSP 1 Score: 54.7 bits (130), Expect = 7.3e-08 Identity = 38/124 (30.65%), Postives = 57/124 (45.97%), Query Frame = 0
BLAST of Lcy11g020540 vs. TAIR 10
Match: AT3G61180.1 (RING/U-box superfamily protein ) HSP 1 Score: 54.3 bits (129), Expect = 9.5e-08 Identity = 23/57 (40.35%), Postives = 35/57 (61.40%), Query Frame = 0
BLAST of Lcy11g020540 vs. TAIR 10
Match: AT5G45290.2 (RING/U-box superfamily protein ) HSP 1 Score: 53.9 bits (128), Expect = 1.2e-07 Identity = 24/62 (38.71%), Postives = 34/62 (54.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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