Lcy11g006190 (gene) Sponge gourd (P93075) v1

Overview
NameLcy11g006190
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionprotein ROOT INITIATION DEFECTIVE 3-like
LocationChr11: 6129324 .. 6131164 (-)
RNA-Seq ExpressionLcy11g006190
SyntenyLcy11g006190
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATATCAGAGTCAGAATAAAGCCAAAATTTACCTAACCAATACCCATGAATTATGAGGTTGAATTCCATATAATATCATTACTGTAAAAGGAAAAAGGAAGCAGACAGATTATACAGATAAATGCATTGTTTTCAACGCCCATAACCATTAAGTTTCTACCTAAAACTTGCACTTCTTGTTTATCAAATTCTTCACTTTCATACCTTTTTCACATGACCATGCCATCTTCTCCTCAAGAAGTTGTTCTTGCCAGCTCTCCTGATGGCCCCATTGTTGCCTATGATGCCTCCACAGGCATCCCTCTAGCCAGCTTCAACGGTAGCCGTTCGCCTCGCCGTGGCATCACCCGGGCCGGGAGAAGTTTCATAGCCGTCTCCCACATCTGCCCGGTCACTGCTTCGGGTTCGATCCACCTTTACAATTGGTGGACTTCATCTGCCTTCCAAAGCCTCACTGTCCCTGAACCTGTTGCCCCTCTCACAGCCACTCCTGATGGTTTCTATCTGTTTGCTGGTGGCCTTTCAGGCTGCATCCATACTCTCTCTCTTCCATCAGGGGATGTTCTAAACTCTTTACCTGCACACAAAAAACCAGTCTCTTGCCTTAAACTTAGTGCTGATGGGTCACTTCTCATATCAGGTGGGGATGATGGCACAATTGTTGTCATCCCAATCTTTCAACTTGTACAAACCAAACCACAAGATGATTCAACCAAACACATTCTATATCAGTTTTCAGCACATGCTGATTCAGTGACTTCCATTTACTCTGGCATGGGAATGTCCAGTTCCCAAATAGTCTCCTGCTCATTGGATGGCAGATGCAAGTTCTGGAGCTTGCTCTCAGGGAAAGCCTTGCACACTGTGGCGTTCCCTTGTGCCATTTTCAGTGTAGTCTTAGACCCAACAGAAACAGAGCTTTTTGCTGCAGGATCCGATGGCTTGGTGTACAAGAGCTCATTGAGGCATAAAAACAAACACCTTATGGGCACAGACTCTGAACTAATTCCACCAGCATCCGATGACCTGGCGTACAAGCGCCCATTGAGGCATAAAAACAAACACCATGTGGGCACAAGCTCTGAACTAATTCCATGGGCGCCAAGACACGATAGTGCAGTGGTCTCTGTAGTCATAGTCAATGAAGGAAATCACTTAATATCTGCAGCAGAAGATGGGAGCATGTGGGTTTGGCAAGTGAACGAAGGGCAGGTCATAATGGCGCTTGAAAACGAGATCGGAAGCATAAGTGATTTGGTGATGGCCACAGACAAAAGCCATGGAAAAGAACAGAGTGTTAGAATCGGCAGCCATGGCAGAGCATTGGAATGTGAGAGCTTTAGATTACCCAGCAGGATGTTGGGCTTGGGCTTGTCAATAAATCAAATAGTTGCTATGCAAGGTGCGTTGGCGGCGGCCGGAAGCGATGTGAGGAGAGCCATTGAGTTGCTGGAATCTGCCATTGATGTGTATGAGAAGATGTTGGAGTTGATCCTCAAGGAAGCCAAAGCAGCCTACAAACAAAGAGAAGAAAACAAGGATAATGATGTATAAGTTATCCATATTGTGGCACGGCCAACTTACGCTCATCCCGACTCACTTTCGAATATTTGTCTTGGATTGAGTCTTTCGAACATCTCACTTCTTATGACATAGTCAGTTGAGCTATGCTCTAATTGACAATTTCTTGACCTTTGTATTTAACCTAACTAGTAAAGATAGGTTGAAAATTTGAATTCCAAAGTTATAATTGTAATGAATCATCTACCATTATATTTTGAAGTATTGATGTATTGGCAAATGGCACGAGATGAAGAATATTCTATCTTCAAATTCGACC

mRNA sequence

TGATATCAGAGTCAGAATAAAGCCAAAATTTACCTAACCAATACCCATGAATTATGAGGTTGAATTCCATATAATATCATTACTGTAAAAGGAAAAAGGAAGCAGACAGATTATACAGATAAATGCATTGTTTTCAACGCCCATAACCATTAAGTTTCTACCTAAAACTTGCACTTCTTGTTTATCAAATTCTTCACTTTCATACCTTTTTCACATGACCATGCCATCTTCTCCTCAAGAAGTTGTTCTTGCCAGCTCTCCTGATGGCCCCATTGTTGCCTATGATGCCTCCACAGGCATCCCTCTAGCCAGCTTCAACGGTAGCCGTTCGCCTCGCCGTGGCATCACCCGGGCCGGGAGAAGTTTCATAGCCGTCTCCCACATCTGCCCGGTCACTGCTTCGGGTTCGATCCACCTTTACAATTGGTGGACTTCATCTGCCTTCCAAAGCCTCACTGTCCCTGAACCTGTTGCCCCTCTCACAGCCACTCCTGATGGTTTCTATCTGTTTGCTGGTGGCCTTTCAGGCTGCATCCATACTCTCTCTCTTCCATCAGGGGATGTTCTAAACTCTTTACCTGCACACAAAAAACCAGTCTCTTGCCTTAAACTTAGTGCTGATGGGTCACTTCTCATATCAGGTGGGGATGATGGCACAATTGTTGTCATCCCAATCTTTCAACTTGTACAAACCAAACCACAAGATGATTCAACCAAACACATTCTATATCAGTTTTCAGCACATGCTGATTCAGTGACTTCCATTTACTCTGGCATGGGAATGTCCAGTTCCCAAATAGTCTCCTGCTCATTGGATGGCAGATGCAAGTTCTGGAGCTTGCTCTCAGGGAAAGCCTTGCACACTGTGGCGTTCCCTTGTGCCATTTTCAGTGTAGTCTTAGACCCAACAGAAACAGAGCTTTTTGCTGCAGGATCCGATGGCTTGGTGTACAAGAGCTCATTGAGGCATAAAAACAAACACCTTATGGGCACAGACTCTGAACTAATTCCACCAGCATCCGATGACCTGGCGTACAAGCGCCCATTGAGGCATAAAAACAAACACCATGTGGGCACAAGCTCTGAACTAATTCCATGGGCGCCAAGACACGATAGTGCAGTGGTCTCTGTAGTCATAGTCAATGAAGGAAATCACTTAATATCTGCAGCAGAAGATGGGAGCATGTGGGTTTGGCAAGTGAACGAAGGGCAGGTCATAATGGCGCTTGAAAACGAGATCGGAAGCATAAGTGATTTGGTGATGGCCACAGACAAAAGCCATGGAAAAGAACAGAGTGTTAGAATCGGCAGCCATGGCAGAGCATTGGAATGTGAGAGCTTTAGATTACCCAGCAGGATGTTGGGCTTGGGCTTGTCAATAAATCAAATAGTTGCTATGCAAGGTGCGTTGGCGGCGGCCGGAAGCGATGTGAGGAGAGCCATTGAGTTGCTGGAATCTGCCATTGATGTGTATGAGAAGATGTTGGAGTTGATCCTCAAGGAAGCCAAAGCAGCCTACAAACAAAGAGAAGAAAACAAGGATAATGATGTATAAGTTATCCATATTGTGGCACGGCCAACTTACGCTCATCCCGACTCACTTTCGAATATTTGTCTTGGATTGAGTCTTTCGAACATCTCACTTCTTATGACATAGTCAGTTGAGCTATGCTCTAATTGACAATTTCTTGACCTTTGTATTTAACCTAACTAGTAAAGATAGGTTGAAAATTTGAATTCCAAAGTTATAATTGTAATGAATCATCTACCATTATATTTTGAAGTATTGATGTATTGGCAAATGGCACGAGATGAAGAATATTCTATCTTCAAATTCGACC

Coding sequence (CDS)

ATGACCATGCCATCTTCTCCTCAAGAAGTTGTTCTTGCCAGCTCTCCTGATGGCCCCATTGTTGCCTATGATGCCTCCACAGGCATCCCTCTAGCCAGCTTCAACGGTAGCCGTTCGCCTCGCCGTGGCATCACCCGGGCCGGGAGAAGTTTCATAGCCGTCTCCCACATCTGCCCGGTCACTGCTTCGGGTTCGATCCACCTTTACAATTGGTGGACTTCATCTGCCTTCCAAAGCCTCACTGTCCCTGAACCTGTTGCCCCTCTCACAGCCACTCCTGATGGTTTCTATCTGTTTGCTGGTGGCCTTTCAGGCTGCATCCATACTCTCTCTCTTCCATCAGGGGATGTTCTAAACTCTTTACCTGCACACAAAAAACCAGTCTCTTGCCTTAAACTTAGTGCTGATGGGTCACTTCTCATATCAGGTGGGGATGATGGCACAATTGTTGTCATCCCAATCTTTCAACTTGTACAAACCAAACCACAAGATGATTCAACCAAACACATTCTATATCAGTTTTCAGCACATGCTGATTCAGTGACTTCCATTTACTCTGGCATGGGAATGTCCAGTTCCCAAATAGTCTCCTGCTCATTGGATGGCAGATGCAAGTTCTGGAGCTTGCTCTCAGGGAAAGCCTTGCACACTGTGGCGTTCCCTTGTGCCATTTTCAGTGTAGTCTTAGACCCAACAGAAACAGAGCTTTTTGCTGCAGGATCCGATGGCTTGGTGTACAAGAGCTCATTGAGGCATAAAAACAAACACCTTATGGGCACAGACTCTGAACTAATTCCACCAGCATCCGATGACCTGGCGTACAAGCGCCCATTGAGGCATAAAAACAAACACCATGTGGGCACAAGCTCTGAACTAATTCCATGGGCGCCAAGACACGATAGTGCAGTGGTCTCTGTAGTCATAGTCAATGAAGGAAATCACTTAATATCTGCAGCAGAAGATGGGAGCATGTGGGTTTGGCAAGTGAACGAAGGGCAGGTCATAATGGCGCTTGAAAACGAGATCGGAAGCATAAGTGATTTGGTGATGGCCACAGACAAAAGCCATGGAAAAGAACAGAGTGTTAGAATCGGCAGCCATGGCAGAGCATTGGAATGTGAGAGCTTTAGATTACCCAGCAGGATGTTGGGCTTGGGCTTGTCAATAAATCAAATAGTTGCTATGCAAGGTGCGTTGGCGGCGGCCGGAAGCGATGTGAGGAGAGCCATTGAGTTGCTGGAATCTGCCATTGATGTGTATGAGAAGATGTTGGAGTTGATCCTCAAGGAAGCCAAAGCAGCCTACAAACAAAGAGAAGAAAACAAGGATAATGATGTATAA

Protein sequence

MTMPSSPQEVVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPVTASGSIHLYNWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADSVTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAGSDGLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHDSAVVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMALENEIGSISDLVMATDKSHGKEQSVRIGSHGRALECESFRLPSRMLGLGLSINQIVAMQGALAAAGSDVRRAIELLESAIDVYEKMLELILKEAKAAYKQREENKDNDV
Homology
[Close]
BLAST of Lcy11g006190 vs. ExPASy Swiss-Prot
Match: Q9M3B4 (Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.8e-33
Identity = 100/335 (29.85%), Postives = 148/335 (44.18%), Query Frame = 0 

Query: 10  VVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPVTASGSIHLY 69
           V+ +SS D  I ++D  TG     F    SP  G+T  G  F+A S +     SGSI  +
Sbjct: 5   VIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTSGSIFYW 64

Query: 70  NWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLPAHKKPVS 129
           +W    A       EP+  L A  +G YL  GG+SG I+   + +G +L     H + V+
Sbjct: 65  SWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVT 124

Query: 130 CLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADSVTSIYSGMG 189
           CL  S D SLL+SG  DG+I V  + +L     +        + F+ H  SVT I    G
Sbjct: 125 CLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYG 184

Query: 190 MSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAGSDGLVYKSS 249
             ++ I+S S D  CK WSL  GK L  + FP  I ++ LDP     +A   D  +Y  +
Sbjct: 185 GCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIYIGA 244

Query: 250 LRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHDSAVVSVVIV 309
           +   +++  GT                         +G+ SE          A+  +   
Sbjct: 245 INATSEY--GTQV-----------------------LGSVSE-------KGKAITCLAYC 304

Query: 310 NEGNHLISAAEDGSMWVWQVNEGQVIMALENEIGS 345
            +GN LIS +EDG + VW     + +  L +  GS
Sbjct: 305 ADGNLLISGSEDGVVCVWDPKSLRHVRTLIHAKGS 307

[Close]
BLAST of Lcy11g006190 vs. ExPASy Swiss-Prot
Match: A0A1L8HX76 (WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 3.9e-25
Identity = 87/340 (25.59%), Postives = 156/340 (45.88%), Query Frame = 0 

Query: 5   SSPQEVVLASSPDGPI---VAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPVT 64
           ++P E+VL++   G +     ++  TG  L ++ G  +  RG+   G  ++    +    
Sbjct: 2   AAPLELVLSADAAGQVANCTVWEPVTGSVLLTYRGGNTSHRGLAVLGGQYLLGGQL---- 61

Query: 65  ASGSIHLYNW---WTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVL 124
             G  ++  W         Q +  P PV  L+A+P+G YL A G++  I+   + +G +L
Sbjct: 62  --GKNYINVWELQRRDQLQQKIVCPGPVNCLSASPNGLYLVA-GIAESIYLWEVSTGHLL 121

Query: 125 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHA 184
             L +H + V+CL  + D S +ISG  D  ++V  ++ ++Q +          Y +S H+
Sbjct: 122 AILNSHYQDVTCLTFTDDSSHIISGAKDSLVLVWGLYSVLQVETSRGPEPR--YVWSRHS 181

Query: 185 DSVTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFA 244
             +T +  G+G   +++ + SLD   K W + SG  L +V F   I SV  DP E  LF 
Sbjct: 182 LPITDVQCGIGGPQARVATSSLDQTIKLWDICSGDLLVSVLFDVRITSVAFDPAEYHLFC 241

Query: 245 AGSDGLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPR 304
            GSDG++Y+  L                       Y  P + +   H     E++    R
Sbjct: 242 GGSDGVIYQVDL-----------------------YTTPEQRERPFH--PEQEMVFKGHR 301

Query: 305 HDSAVVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMAL 339
           +    +SV +  +G+ LIS + D ++ VW +   Q + ++
Sbjct: 302 NQVTCLSVSL--DGSMLISGSHDETVCVWDIQSKQSLRSV 305

[Close]
BLAST of Lcy11g006190 vs. ExPASy Swiss-Prot
Match: Q68EI0 (WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.7e-23
Identity = 89/343 (25.95%), Postives = 151/343 (44.02%), Query Frame = 0 

Query: 5   SSPQEVVLASSPDGPI---VAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPVT 64
           S+P EVVL++   G +     YD  TG    S+ G  +  R +T     +I  + +    
Sbjct: 2   SAPVEVVLSADSAGQLFNCAVYDPHTGSEFLSYRGGNTSSRSLTILNGEYILGAQL---- 61

Query: 65  ASGSIHLYNW---WTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVL 124
             G  ++  W         Q +  P  V  L A+PDG Y+ A G++  I+   + +G++L
Sbjct: 62  --GKNYINVWEIQRKDQLQQKIVCPGIVTCLCASPDGLYVLA-GIAEAIYLWEVSTGNLL 121

Query: 125 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQ-TKPQDDSTKHILYQFSAH 184
             L  H + +SC+K + D S  +SGG D    +  +  +VQ    +    +HIL   S H
Sbjct: 122 AILSRHFQDLSCIKFTDDSSHFVSGGKDNLAFIWNLSSVVQLDSSRTPEPRHIL---SRH 181

Query: 185 ADSVTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELF 244
           +  +T I+ G+    +++ + SLD   K W + SG+ L +V F   I SV  DP E  LF
Sbjct: 182 SLPITDIHCGLMGPQARVATASLDQTVKVWEISSGEMLLSVLFDVGIMSVTFDPCEYFLF 241

Query: 245 AAGSDGLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAP 304
             GSDG +++ SL   +   +  D      +  +  +K                      
Sbjct: 242 CGGSDGNIFQVSLCSTS---LSRDKTFQSDSEGNQVFK---------------------- 301

Query: 305 RHDSAVVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMALEN 341
            H + V  + +  +G  L+S + D ++ +W V   Q I  + +
Sbjct: 302 GHRNLVTCLSVSMDGTVLLSGSNDETVRMWDVQSKQCIWTINH 309

[Close]
BLAST of Lcy11g006190 vs. ExPASy Swiss-Prot
Match: Q9BV38 (WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 4.8e-23
Identity = 81/338 (23.96%), Postives = 157/338 (46.45%), Query Frame = 0 

Query: 5   SSPQEVVLASSPDGPI---VAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPVT 64
           ++P EV + +    P+   + ++  +G  L ++ G ++  RG+      ++  + +    
Sbjct: 2   AAPMEVAVCTDSAAPMWSCIVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL---- 61

Query: 65  ASGSIHLYNW---WTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVL 124
             G  ++  W         Q +  P PV  LTA+P+G Y+ A G++  IH   + +G++L
Sbjct: 62  --GKNYISAWELQRKDQLQQKIMCPGPVTCLTASPNGLYVLA-GVAESIHLWEVSTGNLL 121

Query: 125 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKP-QDDSTKHILYQFSAH 184
             L  H + VSCL+ + D S  ISGG D  ++V  +  ++Q  P +  + +H+   +S H
Sbjct: 122 VILSRHYQDVSCLQFTGDSSHFISGGKDCLVLVWSLCSVLQADPSRIPAPRHV---WSHH 181

Query: 185 ADSVTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELF 244
           A  +T ++ G G   +++ + SLD   K W + SG+ L +V F  +I +V +D  E  +F
Sbjct: 182 ALPITDLHCGFGGPLARVATSSLDQTVKLWEVSSGELLLSVLFDVSIMAVTMDLAEHHMF 241

Query: 245 AAGSDGLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAP 304
             GS+G +++  L                       +  P + +   H    +  +    
Sbjct: 242 CGGSEGSIFQVDL-----------------------FTWPGQRERSFHPEQDAGKV--FK 301

Query: 305 RHDSAVVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVI 336
            H + V  + +  +G+ L+S + D ++ +W V   Q I
Sbjct: 302 GHRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSKQCI 304

[Close]
BLAST of Lcy11g006190 vs. ExPASy Swiss-Prot
Match: Q3SZD4 (WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 5.9e-21
Identity = 80/338 (23.67%), Postives = 154/338 (45.56%), Query Frame = 0 

Query: 5   SSPQEVVLASSPDGPI---VAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPVT 64
           ++P EV + +     +   V ++  +G  L ++ G ++  RG+      ++  + +    
Sbjct: 2   AAPMEVAVCTDSAAQLWSCVVWELHSGANLLTYRGGQAGPRGLALLNGEYLLAAQL---- 61

Query: 65  ASGSIHLYNW---WTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVL 124
             G  ++  W         Q +  P PV  LT +P+G Y+ A G+S  I+   + +G++L
Sbjct: 62  --GKNYICAWELQRKDQLQQKIMCPGPVTCLTTSPNGLYVLA-GISENIYLWEVSTGNLL 121

Query: 125 NSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKP-QDDSTKHILYQFSAH 184
             L  H + VSCL+ + D S  ISGG D  ++   +  ++Q  P +  + +H+   +S H
Sbjct: 122 VILSRHYQDVSCLQFTGDSSHFISGGKDCLVLAWSLCSVLQADPSRTPAPRHV---WSRH 181

Query: 185 ADSVTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELF 244
              +T ++ G G   +++ + SLD   K W + SG+ L +V F   I +V +D  E  +F
Sbjct: 182 TLPITDLHCGFGGPLARVATASLDQTVKLWEVSSGELLLSVLFDVGILAVTMDLAEHYMF 241

Query: 245 AAGSDGLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAP 304
             GSDG +++  L                P   + ++ +P +   K   G          
Sbjct: 242 CGGSDGSIFQVDL-------------CTWPGQREKSF-QPEQEHGKVFRG---------- 301

Query: 305 RHDSAVVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVI 336
            H + V  + +  +G+ L+S + D ++ +W V   Q +
Sbjct: 302 -HRNQVTCLSVSTDGSVLLSGSHDETVRLWDVQSQQCL 304

[Close]
BLAST of Lcy11g006190 vs. ExPASy TrEMBL
Match: A0A6J1CMH2 (protein ROOT INITIATION DEFECTIVE 3-like OS=Momordica charantia OX=3673 GN=LOC111012822 PE=4 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 4.9e-204
Identity = 370/435 (85.06%), Postives = 392/435 (90.11%), Query Frame = 0 

Query: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPV 60
           MTM SSPQEVVLASSPDGPIVAYDASTG PLASFNGSRSPRRGITRAGRSFIAVSHICPV
Sbjct: 1   MTMLSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPV 60

Query: 61  TASGSIHLYNWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS 120
           TASGSIHLYNWWTSSAFQSL+VPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS
Sbjct: 61  TASGSIHLYNWWTSSAFQSLSVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADS 180
           LPAHKKPVSCLKLS DGSLLISGGDDG I+VIPIFQLV+  PQDDSTK ILYQFSAHADS
Sbjct: 121 LPAHKKPVSCLKLSDDGSLLISGGDDGKIIVIPIFQLVEANPQDDSTKRILYQFSAHADS 180

Query: 181 VTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAG 240
           VT+I +GMGM SSQIVSCSLDGRCKFW+LLSG   HTV FPCAIFSVVLDP   + FAAG
Sbjct: 181 VTAISTGMGMYSSQIVSCSLDGRCKFWNLLSGTLSHTVVFPCAIFSVVLDPKGAQFFAAG 240

Query: 241 SDGLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHD 300
           SDG VYK SLRHKNKHLMGT S+LI P S+DL +K  LRHKNKH + TSSELIPWAP+HD
Sbjct: 241 SDGFVYKGSLRHKNKHLMGTGSDLISPVSNDLVHKASLRHKNKHLMDTSSELIPWAPKHD 300

Query: 301 SAVVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMALENEIG-SISDLVMATDKSHGKE 360
           SAVVS+VIVNEGNHLISAAEDGS+WVW++N GQ+IM LENE+G SISDLV AT +SH KE
Sbjct: 301 SAVVSIVIVNEGNHLISAAEDGSIWVWEINTGQIIMDLENEMGRSISDLVTATHRSHEKE 360

Query: 361 QSVRIGSHGRALECESFRLPSRMLGLGLSINQIVAMQGALAAAGSDVRRAIELLESAIDV 420
           QS R+GSHGR LE ESFRLP+RM  LGLSI+Q V MQ ALAAAGSDVRRAI LLESAI V
Sbjct: 361 QSGRLGSHGRELESESFRLPNRM--LGLSIDQTVDMQRALAAAGSDVRRAIGLLESAIAV 420

Query: 421 YEKMLELILKEAKAA 435
           YEKMLELILKEAKAA
Sbjct: 421 YEKMLELILKEAKAA 433

[Close]
BLAST of Lcy11g006190 vs. ExPASy TrEMBL
Match: A0A6J1E4H4 (protein ROOT INITIATION DEFECTIVE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111430540 PE=4 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 5.4e-203
Identity = 363/438 (82.88%), Postives = 396/438 (90.41%), Query Frame = 0 

Query: 3   MPSSPQEVVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPVTA 62
           MP SPQEVVLASSPDGPIVAYDASTG PLASFN SRSPRRGITRAGRS IAVSHICPVTA
Sbjct: 1   MPFSPQEVVLASSPDGPIVAYDASTGTPLASFNDSRSPRRGITRAGRSSIAVSHICPVTA 60

Query: 63  SGSIHLYNWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP 122
           SGSIH+YNWW SSAFQS+TVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP
Sbjct: 61  SGSIHIYNWWNSSAFQSITVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADSVT 182
           AH+K VSCL+LSADGSLLISGGDDG IVV+PIFQLVQ KPQ+++TKHIL+QFSAH DSVT
Sbjct: 121 AHRKSVSCLELSADGSLLISGGDDGMIVVMPIFQLVQAKPQENATKHILHQFSAHTDSVT 180

Query: 183 SIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAGSD 242
           SIYS MGMSSSQIVS S+DGRCKFWSLLSG  LHTV FPCAIFSVVLDP+ETE FAAG+D
Sbjct: 181 SIYSVMGMSSSQIVSSSMDGRCKFWSLLSGTVLHTVVFPCAIFSVVLDPSETEFFAAGTD 240

Query: 243 GLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHDSA 302
           GLVYK SLRH  KHL+ TDSEL PPASDDLAY+  LRHKNKH +GTSSELI W+P+HD+A
Sbjct: 241 GLVYKDSLRHNIKHLISTDSELTPPASDDLAYRCSLRHKNKHLMGTSSELISWSPKHDAA 300

Query: 303 VVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMALENEIGSISDLVMATDKSHGKEQSV 362
           VVS+VI+NEGN+LISAAEDG++WVWQVN+GQVIM LENE+GSISDL +AT+K H KE++V
Sbjct: 301 VVSIVIINEGNNLISAAEDGNIWVWQVNKGQVIMTLENEMGSISDLAIATEKRHEKERNV 360

Query: 363 RIGSHGRALECESFRLPSRMLGLGLSINQIVAMQGALAAAGSDVRRAIELLESAIDVYEK 422
           R GSHGRA++ ES RLPS M  LGL INQ   MQGA+AA GSDVRRAIELLESAI +YEK
Sbjct: 361 RRGSHGRAMKRESSRLPSPM--LGLLINQTAEMQGAVAAGGSDVRRAIELLESAIAMYEK 420

Query: 423 MLELILKEAKAAYKQREE 441
           MLELILKEAKA Y QREE
Sbjct: 421 MLELILKEAKAGYNQREE 436

[Close]
BLAST of Lcy11g006190 vs. ExPASy TrEMBL
Match: A0A6J1JCF3 (protein ROOT INITIATION DEFECTIVE 3-like OS=Cucurbita maxima OX=3661 GN=LOC111483208 PE=4 SV=1)

HSP 1 Score: 716.1 bits (1847), Expect = 9.3e-203
Identity = 362/437 (82.84%), Postives = 396/437 (90.62%), Query Frame = 0 

Query: 3   MPSSPQEVVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPVTA 62
           MP SPQEVVLASSPDGPIVAYDASTG PLASFN S SPRRGITRAGRS IAVSHICP+TA
Sbjct: 1   MPFSPQEVVLASSPDGPIVAYDASTGTPLASFNDSHSPRRGITRAGRSSIAVSHICPITA 60

Query: 63  SGSIHLYNWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP 122
           SGSIH+YNWW SSAFQS+TVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP
Sbjct: 61  SGSIHIYNWWNSSAFQSITVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADSVT 182
           AH+K VSCL+LSADGSLLISGGDDGTIVVIPIFQLVQ KPQ+++TKHIL+QFSAH DSVT
Sbjct: 121 AHRKSVSCLELSADGSLLISGGDDGTIVVIPIFQLVQAKPQENATKHILHQFSAHNDSVT 180

Query: 183 SIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAGSD 242
           SIYS MGMSSSQIVS S+DGRCKFWSLLSG  LHTV FPCAIFSVVLDP+ETE FAAGSD
Sbjct: 181 SIYSVMGMSSSQIVSSSMDGRCKFWSLLSGTVLHTVVFPCAIFSVVLDPSETEFFAAGSD 240

Query: 243 GLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHDSA 302
           GLVYK SLRH  KHL+ TDSEL PPASD+LAY+  LRHKNKH +GTSSELI W+P+HD+A
Sbjct: 241 GLVYKGSLRHNIKHLISTDSELTPPASDNLAYRCSLRHKNKHLMGTSSELISWSPKHDAA 300

Query: 303 VVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMALENEIGSISDLVMATDKSHGKEQSV 362
           VVS+VI+NEGN+LISAAEDG++WVWQVN+GQVIM LENE+GSISDLV+AT+K H KE++V
Sbjct: 301 VVSIVIINEGNNLISAAEDGNIWVWQVNKGQVIMTLENEMGSISDLVIATEKRHEKERNV 360

Query: 363 RIGSHGRALECESFRLPSRMLGLGLSINQIVAMQGALAAAGSDVRRAIELLESAIDVYEK 422
           R GSHGRA++ ES RLPS M  LGL INQ   MQGA+AA GSDVRRAIELLESAI +YEK
Sbjct: 361 RRGSHGRAMKSESSRLPSPM--LGLLINQTAEMQGAVAAGGSDVRRAIELLESAIAMYEK 420

Query: 423 MLELILKEAKAAYKQRE 440
           MLELILKEAKA Y Q+E
Sbjct: 421 MLELILKEAKAGYNQKE 435

[Close]
BLAST of Lcy11g006190 vs. ExPASy TrEMBL
Match: A0A5A7UZU9 (Protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00860 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.3e-201
Identity = 360/443 (81.26%), Postives = 397/443 (89.62%), Query Frame = 0 

Query: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPV 60
           MTMPSSPQEVVLASSPDGPIVAYDASTG PLA+FN SRSPRRGITRAG+SFIAVSHICPV
Sbjct: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60

Query: 61  TASGSIHLYNWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS 120
           TASGSIH+YNWWTSSAFQ LTVPEPVAPLTATPDGFYLFAGGLSG IH LSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYIHILSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADS 180
           LPAHKKPVSCLKLSADGSLLISGGDDGTIVV+PIFQLVQ KP++++T+HIL+QF AH DS
Sbjct: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180

Query: 181 VTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAG 240
           VTSIYSGMG+SS++IVSCSLD RCKFWSLLSG  LHTV FPCAIFSVVL+P+E E FAAG
Sbjct: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240

Query: 241 SDGLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHD 300
           SDGLVYK SLRH NKH  GTD +LIP  S+DL YKR LRHKNKH  GTS ELIPW+P+H+
Sbjct: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSFELIPWSPKHE 300

Query: 301 SAVVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMALENEIGSISDLVMATDKSHGKEQ 360
           +AVVS+VIVNEG HLISAAEDGS+WVW+V +GQVIMALENE+GSISDLVMAT+++HGKEQ
Sbjct: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360

Query: 361 SVRIGSHGRALE-CESFRLPSRMLGLGLSINQIVAMQGALAAAGSDVRRAIELLESAIDV 420
            VR   HGR ++  E FRLP +M  LGLSI + V MQG LAAAGSDVRRAIE+LESAI V
Sbjct: 361 CVRTDRHGREIKISERFRLPIKM--LGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAV 420

Query: 421 YEKMLELILKEAKAAYKQREENK 443
           YEKMLELILKEA+A+Y QREE +
Sbjct: 421 YEKMLELILKEAEASYNQREETQ 441

[Close]
BLAST of Lcy11g006190 vs. ExPASy TrEMBL
Match: A0A5D3CYC7 (Protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00370 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 1.3e-201
Identity = 360/443 (81.26%), Postives = 397/443 (89.62%), Query Frame = 0 

Query: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPV 60
           MTMPSSPQEVVLASSPDGPIVAYDASTG PLA+FN SRSPRRGITRAG+SFIAVSHICPV
Sbjct: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGTPLANFNSSRSPRRGITRAGKSFIAVSHICPV 60

Query: 61  TASGSIHLYNWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS 120
           TASGSIH+YNWWTSSAFQ LTVPEPVAPLTATPDGFYL AGGLSG IH LSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWTSSAFQCLTVPEPVAPLTATPDGFYLLAGGLSGYIHILSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADS 180
           LPAHKKPVSCLKLSADGSLLISGGDDGTIVV+PIFQLVQ KP++++T+HIL+QF AH DS
Sbjct: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVMPIFQLVQAKPRENATEHILHQFLAHTDS 180

Query: 181 VTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAG 240
           VTSIYSGMG+SS++IVSCSLD RCKFWSLLSG  LHTV FPCAIFSVVL+P+E E FAAG
Sbjct: 181 VTSIYSGMGISSTKIVSCSLDARCKFWSLLSGTILHTVVFPCAIFSVVLEPSEIEFFAAG 240

Query: 241 SDGLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHD 300
           SDGLVYK SLRH NKH  GTD +LIP  S+DL YKR LRHKNKH  GTSSELIPW+P+H+
Sbjct: 241 SDGLVYKGSLRHNNKHRRGTDYDLIPQISNDLVYKRSLRHKNKHLTGTSSELIPWSPKHE 300

Query: 301 SAVVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMALENEIGSISDLVMATDKSHGKEQ 360
           +AVVS+VIVNEG HLISAAEDGS+WVW+V +GQVIMALENE+GSISDLVMAT+++HGKEQ
Sbjct: 301 AAVVSIVIVNEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATERAHGKEQ 360

Query: 361 SVRIGSHGRALE-CESFRLPSRMLGLGLSINQIVAMQGALAAAGSDVRRAIELLESAIDV 420
            VR   HGR ++  E FRLP +M  LGLSI + V MQG LAAAGSDVRRAIE+LESAI V
Sbjct: 361 CVRTDRHGREIKISERFRLPIKM--LGLSIKETVDMQGELAAAGSDVRRAIEMLESAIAV 420

Query: 421 YEKMLELILKEAKAAYKQREENK 443
           YEKMLELILKEA+A+Y QREE +
Sbjct: 421 YEKMLELILKEAEASYNQREETQ 441

[Close]
BLAST of Lcy11g006190 vs. NCBI nr
Match: KAG7015046.1 (Protein ROOT INITIATION DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 721.8 bits (1862), Expect = 3.5e-204
Identity = 366/440 (83.18%), Postives = 399/440 (90.68%), Query Frame = 0 

Query: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPV 60
           M+MP SPQEVVLASSPDGPIVAYDASTG PLASFN SRSPRRGITRAGRS IAVSHICP+
Sbjct: 1   MSMPFSPQEVVLASSPDGPIVAYDASTGTPLASFNDSRSPRRGITRAGRSSIAVSHICPI 60

Query: 61  TASGSIHLYNWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS 120
           TASGSIH+YNWW SSAFQS+TVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWNSSAFQSITVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADS 180
           LPAH+K VSCL+LSADGSLLISGGDDG IVV+PIFQLVQ KPQ+++TKHIL+QFSAH DS
Sbjct: 121 LPAHRKSVSCLELSADGSLLISGGDDGMIVVMPIFQLVQAKPQENATKHILHQFSAHTDS 180

Query: 181 VTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAG 240
           VTSIYS MGMSSSQIVS S+DGRCKFWSLLSG  LHTV FPCAIFSVVLDP+ETE FAAG
Sbjct: 181 VTSIYSVMGMSSSQIVSSSMDGRCKFWSLLSGTVLHTVVFPCAIFSVVLDPSETEFFAAG 240

Query: 241 SDGLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHD 300
           SDGLVYK SLRH  KHL+ TDSEL PPASDDLAY+  LRHKNKH +GTSSELI W+P+HD
Sbjct: 241 SDGLVYKGSLRHNIKHLISTDSELTPPASDDLAYRCSLRHKNKHLMGTSSELISWSPKHD 300

Query: 301 SAVVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMALENEIGSISDLVMATDKSHGKEQ 360
           +AVVSVVI+NEGN+LISAAEDG++WVWQVN+GQVIM LENE+GSISDLV+AT+K H KE+
Sbjct: 301 AAVVSVVIINEGNNLISAAEDGNIWVWQVNKGQVIMTLENEMGSISDLVIATEKRHEKER 360

Query: 361 SVRIGSHGRALECESFRLPSRMLGLGLSINQIVAMQGALAAAGSDVRRAIELLESAIDVY 420
           +VR GSHGRA++ ES RLPS M  LGL INQ   MQGA+AA GSDVRRAIELLESAI +Y
Sbjct: 361 NVRSGSHGRAMKRESSRLPSPM--LGLLINQTAEMQGAVAAGGSDVRRAIELLESAIAMY 420

Query: 421 EKMLELILKEAKAAYKQREE 441
           EKMLELILKEAKA Y QREE
Sbjct: 421 EKMLELILKEAKAGYNQREE 438

[Close]
BLAST of Lcy11g006190 vs. NCBI nr
Match: XP_038889657.1 (protein ROOT INITIATION DEFECTIVE 3-like [Benincasa hispida])

HSP 1 Score: 721.8 bits (1862), Expect = 3.5e-204
Identity = 371/441 (84.13%), Postives = 400/441 (90.70%), Query Frame = 0 

Query: 3   MPSSPQEVVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPVTA 62
           MP S QEVVLASSPDGPIVAYDASTG PLASF+GS SPRRGITRAG+SFIAVSHI PVTA
Sbjct: 1   MPFSQQEVVLASSPDGPIVAYDASTGTPLASFSGSCSPRRGITRAGKSFIAVSHISPVTA 60

Query: 63  SGSIHLYNWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP 122
            GSIH+YNWWTSSAFQSLTVPEPVAPLTAT DGFYLFAGGLSG IHTLSLPSGDVLNSLP
Sbjct: 61  LGSIHIYNWWTSSAFQSLTVPEPVAPLTATTDGFYLFAGGLSGYIHTLSLPSGDVLNSLP 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADSVT 182
           AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQ KPQ+++T HIL+QF AH DSVT
Sbjct: 121 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQAKPQENATTHILHQFLAHTDSVT 180

Query: 183 SIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAGSD 242
           SIYSGMG+SSSQIVSCSLDGRCKFWSLLSG  LHTV FPCAIFSVVL+PTETE FAAGSD
Sbjct: 181 SIYSGMGISSSQIVSCSLDGRCKFWSLLSGTILHTVVFPCAIFSVVLEPTETEFFAAGSD 240

Query: 243 GLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHDSA 302
           GLVYK+SLRH NKHLMGTD E IPP S+DL YKRPLR KNKH  GTS ELIPW+P+H++A
Sbjct: 241 GLVYKASLRHNNKHLMGTDYEPIPPISNDLGYKRPLRRKNKHLTGTSYELIPWSPKHEAA 300

Query: 303 VVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMALENEIGSISDLVMATDKSHGKEQSV 362
           V+S+VI+NEG HLISAAEDGS+WVW+V +GQVIMALENE+GSISDLVMAT+KSHGKEQS 
Sbjct: 301 VISIVIINEGKHLISAAEDGSIWVWEVKKGQVIMALENEMGSISDLVMATEKSHGKEQST 360

Query: 363 RIGSHGRALE-CESFRLPSRMLGLGLSINQIVAMQGALAAAGSDVRRAIELLESAIDVYE 422
             GSHGRA+E  ESFRLP +M  LGLSINQ V MQ A+AAAGSDVRRAIE+LESAI VYE
Sbjct: 361 --GSHGRAMEISESFRLPIKM--LGLSINQTVDMQEAVAAAGSDVRRAIEMLESAIAVYE 420

Query: 423 KMLELILKEAKAAYKQREENK 443
           KMLELILKEAKA+Y QREE +
Sbjct: 421 KMLELILKEAKASYNQREEKQ 437

[Close]
BLAST of Lcy11g006190 vs. NCBI nr
Match: KAG6577024.1 (Protein ROOT INITIATION DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 721.5 bits (1861), Expect = 4.6e-204
Identity = 365/440 (82.95%), Postives = 399/440 (90.68%), Query Frame = 0 

Query: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPV 60
           M+MP SPQEVVLASSPDGPIVAYDASTG PLASFN SRSPRRGITRAGRS IAVSHICP+
Sbjct: 1   MSMPFSPQEVVLASSPDGPIVAYDASTGTPLASFNDSRSPRRGITRAGRSSIAVSHICPI 60

Query: 61  TASGSIHLYNWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS 120
           TASGSIH+YNWW SSAFQS+TVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS
Sbjct: 61  TASGSIHIYNWWNSSAFQSITVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADS 180
           LPAH+K VSCL+LSADGSLLISGGDDG IVV+PIFQLVQ KPQ+++TKHIL+QFSAH DS
Sbjct: 121 LPAHRKSVSCLELSADGSLLISGGDDGMIVVMPIFQLVQAKPQENATKHILHQFSAHTDS 180

Query: 181 VTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAG 240
           VTSIYS MGMSSSQIVS S+DGRCKFWSLLSG  LHTV FPCAIFSVVLDP+ETE FAAG
Sbjct: 181 VTSIYSVMGMSSSQIVSSSMDGRCKFWSLLSGTVLHTVVFPCAIFSVVLDPSETEFFAAG 240

Query: 241 SDGLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHD 300
           SDGLVYK SLRH  KHL+ TDSEL PPASDDLAY+  LRHKNKH +GTSSELI W+P+HD
Sbjct: 241 SDGLVYKGSLRHNIKHLISTDSELTPPASDDLAYRCSLRHKNKHLMGTSSELISWSPKHD 300

Query: 301 SAVVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMALENEIGSISDLVMATDKSHGKEQ 360
           +AVVS+VI+NEGN+LISAAEDG++WVWQVN+GQVIM LENE+GSISDLV+AT+K H KE+
Sbjct: 301 AAVVSIVIINEGNNLISAAEDGNIWVWQVNKGQVIMTLENEMGSISDLVIATEKRHEKER 360

Query: 361 SVRIGSHGRALECESFRLPSRMLGLGLSINQIVAMQGALAAAGSDVRRAIELLESAIDVY 420
           +VR GSHGRA++ ES RLPS M  LGL INQ   MQGA+AA GSDVRRAIELLESAI +Y
Sbjct: 361 NVRSGSHGRAMKRESSRLPSPM--LGLLINQTAEMQGAVAAGGSDVRRAIELLESAIAMY 420

Query: 421 EKMLELILKEAKAAYKQREE 441
           EKMLELILKEAKA Y QREE
Sbjct: 421 EKMLELILKEAKAGYNQREE 438

[Close]
BLAST of Lcy11g006190 vs. NCBI nr
Match: XP_022142784.1 (protein ROOT INITIATION DEFECTIVE 3-like [Momordica charantia])

HSP 1 Score: 720.3 bits (1858), Expect = 1.0e-203
Identity = 370/435 (85.06%), Postives = 392/435 (90.11%), Query Frame = 0 

Query: 1   MTMPSSPQEVVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPV 60
           MTM SSPQEVVLASSPDGPIVAYDASTG PLASFNGSRSPRRGITRAGRSFIAVSHICPV
Sbjct: 1   MTMLSSPQEVVLASSPDGPIVAYDASTGTPLASFNGSRSPRRGITRAGRSFIAVSHICPV 60

Query: 61  TASGSIHLYNWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS 120
           TASGSIHLYNWWTSSAFQSL+VPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS
Sbjct: 61  TASGSIHLYNWWTSSAFQSLSVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNS 120

Query: 121 LPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADS 180
           LPAHKKPVSCLKLS DGSLLISGGDDG I+VIPIFQLV+  PQDDSTK ILYQFSAHADS
Sbjct: 121 LPAHKKPVSCLKLSDDGSLLISGGDDGKIIVIPIFQLVEANPQDDSTKRILYQFSAHADS 180

Query: 181 VTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAG 240
           VT+I +GMGM SSQIVSCSLDGRCKFW+LLSG   HTV FPCAIFSVVLDP   + FAAG
Sbjct: 181 VTAISTGMGMYSSQIVSCSLDGRCKFWNLLSGTLSHTVVFPCAIFSVVLDPKGAQFFAAG 240

Query: 241 SDGLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHD 300
           SDG VYK SLRHKNKHLMGT S+LI P S+DL +K  LRHKNKH + TSSELIPWAP+HD
Sbjct: 241 SDGFVYKGSLRHKNKHLMGTGSDLISPVSNDLVHKASLRHKNKHLMDTSSELIPWAPKHD 300

Query: 301 SAVVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMALENEIG-SISDLVMATDKSHGKE 360
           SAVVS+VIVNEGNHLISAAEDGS+WVW++N GQ+IM LENE+G SISDLV AT +SH KE
Sbjct: 301 SAVVSIVIVNEGNHLISAAEDGSIWVWEINTGQIIMDLENEMGRSISDLVTATHRSHEKE 360

Query: 361 QSVRIGSHGRALECESFRLPSRMLGLGLSINQIVAMQGALAAAGSDVRRAIELLESAIDV 420
           QS R+GSHGR LE ESFRLP+RM  LGLSI+Q V MQ ALAAAGSDVRRAI LLESAI V
Sbjct: 361 QSGRLGSHGRELESESFRLPNRM--LGLSIDQTVDMQRALAAAGSDVRRAIGLLESAIAV 420

Query: 421 YEKMLELILKEAKAA 435
           YEKMLELILKEAKAA
Sbjct: 421 YEKMLELILKEAKAA 433

[Close]
BLAST of Lcy11g006190 vs. NCBI nr
Match: XP_023552864.1 (protein ROOT INITIATION DEFECTIVE 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 717.2 bits (1850), Expect = 8.6e-203
Identity = 363/438 (82.88%), Postives = 397/438 (90.64%), Query Frame = 0 

Query: 3   MPSSPQEVVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPVTA 62
           MP SPQEVVLASSPDGPIVAYDASTG PLASFN SRSPRRGITRAGRS IAVSHICP+TA
Sbjct: 1   MPFSPQEVVLASSPDGPIVAYDASTGTPLASFNDSRSPRRGITRAGRSSIAVSHICPITA 60

Query: 63  SGSIHLYNWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP 122
           SGSIH+YNWW SSAFQS+TVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP
Sbjct: 61  SGSIHIYNWWNSSAFQSITVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLP 120

Query: 123 AHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADSVT 182
           AH+K VSCL+LSADGSLLISGGDDGTIVVIPIFQLVQ KPQ+++TKHIL+QFSAH DSVT
Sbjct: 121 AHRKSVSCLELSADGSLLISGGDDGTIVVIPIFQLVQAKPQENATKHILHQFSAHNDSVT 180

Query: 183 SIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAGSD 242
           SIYS MGMSSSQIVS S+DGRCKFWSLLSG  LHTV FPC IFSVVLDP+ETE FAAG+D
Sbjct: 181 SIYSVMGMSSSQIVSSSMDGRCKFWSLLSGTVLHTVVFPCVIFSVVLDPSETEFFAAGTD 240

Query: 243 GLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHDSA 302
           GLVYK SLRH  KHL+ TDSEL PPASDDLAY+  LRHKNKH +GTSSELI W+P+H++A
Sbjct: 241 GLVYKGSLRHNIKHLIRTDSELTPPASDDLAYRCSLRHKNKHLMGTSSELISWSPKHNAA 300

Query: 303 VVSVVIVNEGNHLISAAEDGSMWVWQVNEGQVIMALENEIGSISDLVMATDKSHGKEQSV 362
           VVS+VI+NEGN+LISAAEDG++WVWQVN+GQVIM LENE+GSISDLV+AT+K H KE++V
Sbjct: 301 VVSIVIINEGNNLISAAEDGNIWVWQVNKGQVIMTLENEMGSISDLVIATEKRHEKERNV 360

Query: 363 RIGSHGRALECESFRLPSRMLGLGLSINQIVAMQGALAAAGSDVRRAIELLESAIDVYEK 422
           R GSHGRA++ ES RLPS M  LGL INQ   MQGA+AA GSDVRRAIELLESAI +YEK
Sbjct: 361 RRGSHGRAMKSESSRLPSPM--LGLLINQTAEMQGAVAAGGSDVRRAIELLESAIAMYEK 420

Query: 423 MLELILKEAKAAYKQREE 441
           MLELILKEAKA Y QREE
Sbjct: 421 MLELILKEAKAGYNQREE 436

[Close]
BLAST of Lcy11g006190 vs. TAIR 10
Match: AT3G49180.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 142.9 bits (359), Expect = 6.2e-34
Identity = 100/335 (29.85%), Postives = 148/335 (44.18%), Query Frame = 0 

Query: 10  VVLASSPDGPIVAYDASTGIPLASFNGSRSPRRGITRAGRSFIAVSHICPVTASGSIHLY 69
           V+ +SS D  I ++D  TG     F    SP  G+T  G  F+A S +     SGSI  +
Sbjct: 5   VIASSSIDEGIGSWDLKTGTEQLQFKPCASPAHGLTAVGEKFLASSQLSARNTSGSIFYW 64

Query: 70  NWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLPAHKKPVS 129
           +W    A       EP+  L A  +G YL  GG+SG I+   + +G +L     H + V+
Sbjct: 65  SWTKPQAEVKSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVT 124

Query: 130 CLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADSVTSIYSGMG 189
           CL  S D SLL+SG  DG+I V  + +L     +        + F+ H  SVT I    G
Sbjct: 125 CLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYG 184

Query: 190 MSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPCAIFSVVLDPTETELFAAGSDGLVYKSS 249
             ++ I+S S D  CK WSL  GK L  + FP  I ++ LDP     +A   D  +Y  +
Sbjct: 185 GCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPSVINALALDPGGCVFYAGARDSKIYIGA 244

Query: 250 LRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWAPRHDSAVVSVVIV 309
           +   +++  GT                         +G+ SE          A+  +   
Sbjct: 245 INATSEY--GTQV-----------------------LGSVSE-------KGKAITCLAYC 304

Query: 310 NEGNHLISAAEDGSMWVWQVNEGQVIMALENEIGS 345
            +GN LIS +EDG + VW     + +  L +  GS
Sbjct: 305 ADGNLLISGSEDGVVCVWDPKSLRHVRTLIHAKGS 307

[Close]
BLAST of Lcy11g006190 vs. TAIR 10
Match: AT1G58230.1 (binding )

HSP 1 Score: 57.8 bits (138), Expect = 2.6e-08
Identity = 38/143 (26.57%), Postives = 66/143 (46.15%), Query Frame = 0 

Query: 94   DGFYLFAGGLSGCIHTLSLPSGDVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIP 153
            + F +  G      H +SL  G V+ S+  HK  VSC+ ++AD ++L +G  D T++V  
Sbjct: 2339 ENFLVSCGNWENSFHVISLTDGRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVWD 2398

Query: 154  IFQLVQTKPQ---------------DDSTKHILYQFSAHADSVTSIYSGMGMSSSQIVSC 213
            I ++   + +                D+  HIL     H D +T +Y    +    ++S 
Sbjct: 2399 ILRMRTPEKRVRNTHAEVLRKDIVIADAPSHIL---CGHDDIITCLYVSTDLDI--VISG 2458

Query: 214  SLDGRCKFWSLLSGKALHTVAFP 222
            S DG C F +L  G+ + ++  P
Sbjct: 2459 SKDGTCVFHTLREGRYIRSLKHP 2476

[Close]
BLAST of Lcy11g006190 vs. TAIR 10
Match: AT4G15900.1 (pleiotropic regulatory locus 1 )

HSP 1 Score: 53.9 bits (128), Expect = 3.8e-07
Identity = 58/276 (21.01%), Postives = 102/276 (36.96%), Query Frame = 0 

Query: 61  TASGSIHLYNWWTSSAFQSLTVP---EPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDV 120
           T S    +  W  ++    LT+    E V  L  +    Y+F+ G    +    L    V
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKV 252

Query: 121 LNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAH 180
           + S   H   V CL L     +L++GG D    V            D  TK  ++  S H
Sbjct: 253 IRSYHGHLSGVYCLALHPTLDVLLTGGRDSVCRV-----------WDIRTKMQIFALSGH 312

Query: 181 ADSVTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVA-FPCAIFSVVLDPTETEL 240
            ++V S+++    +  Q+V+ S D   KFW L  GK + T+     ++ ++ L P E   
Sbjct: 313 DNTVCSVFT--RPTDPQVVTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAF 372

Query: 241 FAAGSDGLVYKSSLRHKNKHLMGTDSELIPPASDDLAYKRPLRHKNKHHVGTSSELIPWA 300
            +A +D     S  + +  H M +  +                                 
Sbjct: 373 ASASADNTKKFSLPKGEFCHNMLSQQK--------------------------------- 417

Query: 301 PRHDSAVVSVVIVNEGNHLISAAEDGSMWVWQVNEG 333
                 +++ + VNE   +++  ++GS+W W    G
Sbjct: 433 -----TIINAMAVNEDGVMVTGGDNGSIWFWDWKSG 417

[Close]
BLAST of Lcy11g006190 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 49.7 bits (117), Expect = 7.2e-06
Identity = 50/243 (20.58%), Postives = 99/243 (40.74%), Query Frame = 0 

Query: 11  VLASSPDGPIVAYDASTGIPL------ASFNGSRSPRRGITRAGRSFIAVSHICPVTASG 70
           ++++SPD  + A+D  TG  +      +SF  S  P    TR G   I        +  G
Sbjct: 111 IVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCP----TRRGPPLIISG-----SDDG 170

Query: 71  SIHLYNWWTSSAFQSLTVPEPVAPLTATPDGFYLFAGGLSGCIHTLSLPSGDVLNSLPAH 130
           +  L++     A Q+      +  ++ +     +F GG+   +    L  G+   +L  H
Sbjct: 171 TAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTLEGH 230

Query: 131 KKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFSAHADSVTSI 190
           +  ++ + LS DGS L++ G D  + V   + +    PQ+   K  +++   H      +
Sbjct: 231 QDTITGMSLSPDGSYLLTNGMDNKLCV---WDMRPYAPQNRCVK--IFEGHQHNFEKNLL 290

Query: 191 YSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTV-AFPCAIFSVVLDPTETELFAAGSDG 247
                   +++ + S D     W   S + ++ +     ++   V  PTE  + +  SD 
Sbjct: 291 KCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDK 339

[Close]
BLAST of Lcy11g006190 vs. TAIR 10
Match: AT4G35140.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 44.3 bits (103), Expect = 3.0e-04
Identity = 39/140 (27.86%), Postives = 61/140 (43.57%), Query Frame = 0 

Query: 116 DVLNSLPAHKKPVSCLKLSADGSLLISGGDDGTIVVIPIFQLVQTKPQDDSTKHILYQFS 175
           ++   L  HK  V+ +  +A+G +LISG DD  +V+   +QL   K         L   S
Sbjct: 50  EIYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWD-WQLGNVK---------LSFHS 109

Query: 176 AHADSVTSIYSGMGMSSSQIVSCSLDGRCKFWSLLSGKALHTVAFPC---AIFSVVLDPT 235
            HA++V             IV+C+ DG  +  S+L G  + T            + ++P 
Sbjct: 110 GHANNVFQAKFMPFSDDRTIVTCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPG 169

Query: 236 ETELF-AAGSDGLVYKSSLR 252
              +F   G DGLV +  LR
Sbjct: 170 NPHIFYTCGEDGLVQRFDLR 179

The following BLAST results are available for this feature:
BLAST of Lcy11g006190 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M3B48.8e-3329.85Protein ROOT INITIATION DEFECTIVE 3 OS=Arabidopsis thaliana OX=3702 GN=RID3 PE=1... [more]
A0A1L8HX763.9e-2525.59WD repeat-containing protein 18 OS=Xenopus laevis OX=8355 GN=wdr18 PE=3 SV=1[more]
Q68EI01.7e-2325.95WD repeat-containing protein 18 OS=Danio rerio OX=7955 GN=wdr18 PE=2 SV=1[more]
Q9BV384.8e-2323.96WD repeat-containing protein 18 OS=Homo sapiens OX=9606 GN=WDR18 PE=1 SV=2[more]
Q3SZD45.9e-2123.67WD repeat-containing protein 18 OS=Bos taurus OX=9913 GN=WDR18 PE=2 SV=1[more]
BLAST of Lcy11g006190 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CMH24.9e-20485.06protein ROOT INITIATION DEFECTIVE 3-like OS=Momordica charantia OX=3673 GN=LOC11... [more]
A0A6J1E4H45.4e-20382.88protein ROOT INITIATION DEFECTIVE 3-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1JCF39.3e-20382.84protein ROOT INITIATION DEFECTIVE 3-like OS=Cucurbita maxima OX=3661 GN=LOC11148... [more]
A0A5A7UZU91.3e-20181.26Protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5D3CYC71.3e-20181.26Protein ROOT INITIATION DEFECTIVE 3-like OS=Cucumis melo var. makuwa OX=1194695 ... [more]
BLAST of Lcy11g006190 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7015046.13.5e-20483.18Protein ROOT INITIATION DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. argy... [more]
XP_038889657.13.5e-20484.13protein ROOT INITIATION DEFECTIVE 3-like [Benincasa hispida][more]
KAG6577024.14.6e-20482.95Protein ROOT INITIATION DEFECTIVE 3, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_022142784.11.0e-20385.06protein ROOT INITIATION DEFECTIVE 3-like [Momordica charantia][more]
XP_023552864.18.6e-20382.88protein ROOT INITIATION DEFECTIVE 3-like [Cucurbita pepo subsp. pepo][more]
BLAST of Lcy11g006190 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G49180.16.2e-3429.85Transducin/WD40 repeat-like superfamily protein [more]
AT1G58230.12.6e-0826.57binding [more]
AT4G15900.13.8e-0721.01pleiotropic regulatory locus 1 [more]
AT2G43770.17.2e-0620.58Transducin/WD40 repeat-like superfamily protein [more]
AT4G35140.13.0e-0427.86Transducin/WD40 repeat-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 410..430
NoneNo IPR availablePANTHERPTHR18763WD-REPEAT PROTEIN 18coord: 263..442
coord: 3..266
NoneNo IPR availablePANTHERPTHR18763:SF3OS09G0477800 PROTEINcoord: 263..442
coord: 3..266
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 121..151
score: 8.65015
NoneNo IPR availablePROSITEPS50294WD_REPEATS_REGIONcoord: 296..333
score: 9.019239
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 211..249
e-value: 42.0
score: 6.7
coord: 289..328
e-value: 0.06
score: 22.5
coord: 114..153
e-value: 8.6E-7
score: 38.6
coord: 167..208
e-value: 0.0024
score: 27.1
coord: 73..111
e-value: 470.0
score: 0.1
IPR001680WD40 repeatPFAMPF00400WD40coord: 171..208
e-value: 0.084
score: 13.8
coord: 117..151
e-value: 4.8E-6
score: 27.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 121..151
score: 10.274523
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 296..337
score: 11.912015
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 174..217
score: 8.603614
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 269..405
e-value: 1.8E-6
score: 29.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 166..265
e-value: 2.4E-9
score: 38.4
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 3..165
e-value: 6.5E-19
score: 69.8
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 10..333

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy11g006190.1Lcy11g006190.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030174 regulation of DNA-dependent DNA replication initiation
biological_process GO:0006364 rRNA processing
cellular_component GO:0005656 nuclear pre-replicative complex
cellular_component GO:0097344 Rix1 complex
molecular_function GO:0005515 protein binding