Lcy10g006730 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACAAGTTCAAAAAGAAATGAGGTTGAAATTGATTGTGAGGAGAACGACAATTTGGATGAACTTGCTGAGATGCCACCACCACCACTTAAGAATGAGAGAAAGAGGAAAAGAACTTCTATGGTATGGGATCACTTCACTAAATTACCTGATTGTAGTGAAGATAAACCTCAAGCCAAATGTAATTATTGTGACACTATATATGCATGTCATACAAAAAGGAACGGAACAGGGACAATGAGATTACATATTGAGAGCTATTGCAAAAAAAGTCCTTTTGCAAAAAAAAAAAAAAGATGCATCTCAACAGAAATTGGTATTTAAAAATAATGATGGTGTGGGAGATGATAAAGCAAATACATCACTTAAGTGTGCAACTTTCACTGTAGAGAATGCTATGAAACTTCTCGCTGAAATGATCATAATTGATGAGCTATCATTTAGATTTGTGGAGAGTGAAGGATTTAGGAAGTTTGTGGAGGGGACGATCACTTTATTGGAACCTAAATTTGTTCTTCCTTCTTGAACTACAATTGCCAAAGATATTTTAGCTATATATGCCACACAAAAGCAAGCTTTGAAAGAACTTTTCGTAGATCAAGGGTTTAGAATTTCACTTACAACTGATACCTGGACATCTTGTCAAAACATTAACTATATGGTATTGACAGCACATTTTATTGATAGTAACTGGAAATTGCATAAGAGGATCATCAATTTCACTCAAATAGATAATCATAAAGGGGAGACCATATGAAGAGAAGTTGAACGATGTTTGAAACATTGGGGAATTGAAAAGGTGTTGACGTTGACTGTTGATAATGCTTCATCCAATGATACTGCTATTGCTTATCTAGTTAAGCGTTTTAAACATGGATTGGTGTTGGATGGTGAGTTTTTGCATGTCAGATGTTGTGCACATATCCTTAATTTGATTGTGAATGATGGCTTGAAAGATGTTCATGAATCAGTGTCTCAAATTTGAAATGTTGTTATATTTGTTAGATCTTCTCCCGCTCGATTTGCAAAATTTAAGATATGTATTGAAGAGGAGAATATATCTAGCAATAGTCTTATATGTCTTGATGTTCCAACAAGGTGGAACTCTACATATTTGATGCTTGAGGCTACTGAAAAATTTGAGAAGGCATTTGATAGATTAGATTATCACGACCTAGCATACTTGAAAATGAAGGAGGAGAATCAAAATCCTAACAGTATAGATTGGGAGGTTGCTCGCATATTTACTAAGTTCTTATCCGTATTTTATGAGGTAACTCTTAGAATTTCTGGTTCACTTTATATTACTTCAAACATGGTCTTCGAAGAAATTGCACCTATCCAGAATTGTATACGGAAATATTCTTCAGGTAGTGGTGATAGTCCAATTATTACTGATGTTGCAACTAAAATGCAATAA ATGACAAGTTCAAAAAGAAATGAGGTTGAAATTGATTGTGAGGAGAACGACAATTTGGATGAACTTGCTGAGATGCCACCACCACCACTTAAGAATGAGAGAAAGAGGAAAAGAACTTCTATGAAATTGGTATTTAAAAATAATGATGGTGTGGGAGATGATAAAGCAAATACATCACTTAAGTGTGCAACTTTCACTGTAGAGAATGCTATGAAACTTCTCGCTGAAATGATCATAATTGATGAGCTATCATTTAGATTTGTGGAGAGTGAAGGATTTAGGAAATCTTCTCCCGCTCGATTTGCAAAATTTAAGATATGTATTGAAGAGGAGAATATATCTAGCAATAGTCTTATATGTCTTGATGTTCCAACAAGGTGGAACTCTACATATTTGATGCTTGAGGCTACTGAAAAATTTGAGAAGGCATTTGATAGATTAGATTATCACGACCTAGCATACTTGAAAATGAAGGAGGAGAATCAAAATCCTAACAGTATAGATTGGGAGGTTGCTCGCATATTTACTAAGTTCTTATCCGTATTTTATGAGGTAACTCTTAGAATTTCTGGTTCACTTTATATTACTTCAAACATGGTCTTCGAAGAAATTGCACCTATCCAGAATTGTATACGGAAATATTCTTCAGGTAGTGGTGATAGTCCAATTATTACTGATGTTGCAACTAAAATGCAATAA ATGACAAGTTCAAAAAGAAATGAGGTTGAAATTGATTGTGAGGAGAACGACAATTTGGATGAACTTGCTGAGATGCCACCACCACCACTTAAGAATGAGAGAAAGAGGAAAAGAACTTCTATGAAATTGGTATTTAAAAATAATGATGGTGTGGGAGATGATAAAGCAAATACATCACTTAAGTGTGCAACTTTCACTGTAGAGAATGCTATGAAACTTCTCGCTGAAATGATCATAATTGATGAGCTATCATTTAGATTTGTGGAGAGTGAAGGATTTAGGAAATCTTCTCCCGCTCGATTTGCAAAATTTAAGATATGTATTGAAGAGGAGAATATATCTAGCAATAGTCTTATATGTCTTGATGTTCCAACAAGGTGGAACTCTACATATTTGATGCTTGAGGCTACTGAAAAATTTGAGAAGGCATTTGATAGATTAGATTATCACGACCTAGCATACTTGAAAATGAAGGAGGAGAATCAAAATCCTAACAGTATAGATTGGGAGGTTGCTCGCATATTTACTAAGTTCTTATCCGTATTTTATGAGGTAACTCTTAGAATTTCTGGTTCACTTTATATTACTTCAAACATGGTCTTCGAAGAAATTGCACCTATCCAGAATTGTATACGGAAATATTCTTCAGGTAGTGGTGATAGTCCAATTATTACTGATGTTGCAACTAAAATGCAATAA MTSSKRNEVEIDCEENDNLDELAEMPPPPLKNERKRKRTSMKLVFKNNDGVGDDKANTSLKCATFTVENAMKLLAEMIIIDELSFRFVESEGFRKSSPARFAKFKICIEEENISSNSLICLDVPTRWNSTYLMLEATEKFEKAFDRLDYHDLAYLKMKEENQNPNSIDWEVARIFTKFLSVFYEVTLRISGSLYITSNMVFEEIAPIQNCIRKYSSGSGDSPIITDVATKMQ Homology
BLAST of Lcy10g006730 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.8e-13 Identity = 56/184 (30.43%), Postives = 91/184 (49.46%), Query Frame = 0
BLAST of Lcy10g006730 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.8e-12 Identity = 55/184 (29.89%), Postives = 90/184 (48.91%), Query Frame = 0
BLAST of Lcy10g006730 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 2.1e-09 Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 0
BLAST of Lcy10g006730 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2) HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09 Identity = 37/120 (30.83%), Postives = 64/120 (53.33%), Query Frame = 0
BLAST of Lcy10g006730 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3) HSP 1 Score: 60.1 bits (144), Expect = 3.9e-08 Identity = 48/157 (30.57%), Postives = 74/157 (47.13%), Query Frame = 0
BLAST of Lcy10g006730 vs. ExPASy TrEMBL
Match: A0A5A7U843 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001130 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 1.0e-43 Identity = 103/217 (47.47%), Postives = 135/217 (62.21%), Query Frame = 0
BLAST of Lcy10g006730 vs. ExPASy TrEMBL
Match: A0A5A7U523 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43G00190 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 3.6e-41 Identity = 99/212 (46.70%), Postives = 131/212 (61.79%), Query Frame = 0
BLAST of Lcy10g006730 vs. ExPASy TrEMBL
Match: A0A5D3CXI1 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004160 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.6e-33 Identity = 76/132 (57.58%), Postives = 97/132 (73.48%), Query Frame = 0
BLAST of Lcy10g006730 vs. ExPASy TrEMBL
Match: A0A5D3CR68 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001050 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.6e-33 Identity = 76/132 (57.58%), Postives = 97/132 (73.48%), Query Frame = 0
BLAST of Lcy10g006730 vs. ExPASy TrEMBL
Match: A0A5D3DAN8 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001750 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.6e-33 Identity = 76/132 (57.58%), Postives = 97/132 (73.48%), Query Frame = 0
BLAST of Lcy10g006730 vs. NCBI nr
Match: KAA0049761.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 186.8 bits (473), Expect = 2.1e-43 Identity = 103/217 (47.47%), Postives = 135/217 (62.21%), Query Frame = 0
BLAST of Lcy10g006730 vs. NCBI nr
Match: KAA0048725.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]) HSP 1 Score: 178.3 bits (451), Expect = 7.5e-41 Identity = 99/212 (46.70%), Postives = 131/212 (61.79%), Query Frame = 0
BLAST of Lcy10g006730 vs. NCBI nr
Match: XP_038890289.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]) HSP 1 Score: 174.9 bits (442), Expect = 8.3e-40 Identity = 84/154 (54.55%), Postives = 116/154 (75.32%), Query Frame = 0
BLAST of Lcy10g006730 vs. NCBI nr
Match: XP_038889379.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]) HSP 1 Score: 173.3 bits (438), Expect = 2.4e-39 Identity = 85/144 (59.03%), Postives = 106/144 (73.61%), Query Frame = 0
BLAST of Lcy10g006730 vs. NCBI nr
Match: XP_038904318.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]) HSP 1 Score: 171.8 bits (434), Expect = 7.0e-39 Identity = 93/183 (50.82%), Postives = 121/183 (66.12%), Query Frame = 0
BLAST of Lcy10g006730 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain ) HSP 1 Score: 56.6 bits (135), Expect = 3.1e-08 Identity = 36/138 (26.09%), Postives = 65/138 (47.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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