Lcy10g006730 (gene) Sponge gourd (P93075) v1

Overview
NameLcy10g006730
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionZinc finger BED domain-containing protein RICESLEEPER 3-like
LocationChr10: 27690844 .. 27692263 (+)
RNA-Seq ExpressionLcy10g006730
SyntenyLcy10g006730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAGTTCAAAAAGAAATGAGGTTGAAATTGATTGTGAGGAGAACGACAATTTGGATGAACTTGCTGAGATGCCACCACCACCACTTAAGAATGAGAGAAAGAGGAAAAGAACTTCTATGGTATGGGATCACTTCACTAAATTACCTGATTGTAGTGAAGATAAACCTCAAGCCAAATGTAATTATTGTGACACTATATATGCATGTCATACAAAAAGGAACGGAACAGGGACAATGAGATTACATATTGAGAGCTATTGCAAAAAAAGTCCTTTTGCAAAAAAAAAAAAAAGATGCATCTCAACAGAAATTGGTATTTAAAAATAATGATGGTGTGGGAGATGATAAAGCAAATACATCACTTAAGTGTGCAACTTTCACTGTAGAGAATGCTATGAAACTTCTCGCTGAAATGATCATAATTGATGAGCTATCATTTAGATTTGTGGAGAGTGAAGGATTTAGGAAGTTTGTGGAGGGGACGATCACTTTATTGGAACCTAAATTTGTTCTTCCTTCTTGAACTACAATTGCCAAAGATATTTTAGCTATATATGCCACACAAAAGCAAGCTTTGAAAGAACTTTTCGTAGATCAAGGGTTTAGAATTTCACTTACAACTGATACCTGGACATCTTGTCAAAACATTAACTATATGGTATTGACAGCACATTTTATTGATAGTAACTGGAAATTGCATAAGAGGATCATCAATTTCACTCAAATAGATAATCATAAAGGGGAGACCATATGAAGAGAAGTTGAACGATGTTTGAAACATTGGGGAATTGAAAAGGTGTTGACGTTGACTGTTGATAATGCTTCATCCAATGATACTGCTATTGCTTATCTAGTTAAGCGTTTTAAACATGGATTGGTGTTGGATGGTGAGTTTTTGCATGTCAGATGTTGTGCACATATCCTTAATTTGATTGTGAATGATGGCTTGAAAGATGTTCATGAATCAGTGTCTCAAATTTGAAATGTTGTTATATTTGTTAGATCTTCTCCCGCTCGATTTGCAAAATTTAAGATATGTATTGAAGAGGAGAATATATCTAGCAATAGTCTTATATGTCTTGATGTTCCAACAAGGTGGAACTCTACATATTTGATGCTTGAGGCTACTGAAAAATTTGAGAAGGCATTTGATAGATTAGATTATCACGACCTAGCATACTTGAAAATGAAGGAGGAGAATCAAAATCCTAACAGTATAGATTGGGAGGTTGCTCGCATATTTACTAAGTTCTTATCCGTATTTTATGAGGTAACTCTTAGAATTTCTGGTTCACTTTATATTACTTCAAACATGGTCTTCGAAGAAATTGCACCTATCCAGAATTGTATACGGAAATATTCTTCAGGTAGTGGTGATAGTCCAATTATTACTGATGTTGCAACTAAAATGCAATAA

mRNA sequence

ATGACAAGTTCAAAAAGAAATGAGGTTGAAATTGATTGTGAGGAGAACGACAATTTGGATGAACTTGCTGAGATGCCACCACCACCACTTAAGAATGAGAGAAAGAGGAAAAGAACTTCTATGAAATTGGTATTTAAAAATAATGATGGTGTGGGAGATGATAAAGCAAATACATCACTTAAGTGTGCAACTTTCACTGTAGAGAATGCTATGAAACTTCTCGCTGAAATGATCATAATTGATGAGCTATCATTTAGATTTGTGGAGAGTGAAGGATTTAGGAAATCTTCTCCCGCTCGATTTGCAAAATTTAAGATATGTATTGAAGAGGAGAATATATCTAGCAATAGTCTTATATGTCTTGATGTTCCAACAAGGTGGAACTCTACATATTTGATGCTTGAGGCTACTGAAAAATTTGAGAAGGCATTTGATAGATTAGATTATCACGACCTAGCATACTTGAAAATGAAGGAGGAGAATCAAAATCCTAACAGTATAGATTGGGAGGTTGCTCGCATATTTACTAAGTTCTTATCCGTATTTTATGAGGTAACTCTTAGAATTTCTGGTTCACTTTATATTACTTCAAACATGGTCTTCGAAGAAATTGCACCTATCCAGAATTGTATACGGAAATATTCTTCAGGTAGTGGTGATAGTCCAATTATTACTGATGTTGCAACTAAAATGCAATAA

Coding sequence (CDS)

ATGACAAGTTCAAAAAGAAATGAGGTTGAAATTGATTGTGAGGAGAACGACAATTTGGATGAACTTGCTGAGATGCCACCACCACCACTTAAGAATGAGAGAAAGAGGAAAAGAACTTCTATGAAATTGGTATTTAAAAATAATGATGGTGTGGGAGATGATAAAGCAAATACATCACTTAAGTGTGCAACTTTCACTGTAGAGAATGCTATGAAACTTCTCGCTGAAATGATCATAATTGATGAGCTATCATTTAGATTTGTGGAGAGTGAAGGATTTAGGAAATCTTCTCCCGCTCGATTTGCAAAATTTAAGATATGTATTGAAGAGGAGAATATATCTAGCAATAGTCTTATATGTCTTGATGTTCCAACAAGGTGGAACTCTACATATTTGATGCTTGAGGCTACTGAAAAATTTGAGAAGGCATTTGATAGATTAGATTATCACGACCTAGCATACTTGAAAATGAAGGAGGAGAATCAAAATCCTAACAGTATAGATTGGGAGGTTGCTCGCATATTTACTAAGTTCTTATCCGTATTTTATGAGGTAACTCTTAGAATTTCTGGTTCACTTTATATTACTTCAAACATGGTCTTCGAAGAAATTGCACCTATCCAGAATTGTATACGGAAATATTCTTCAGGTAGTGGTGATAGTCCAATTATTACTGATGTTGCAACTAAAATGCAATAA

Protein sequence

MTSSKRNEVEIDCEENDNLDELAEMPPPPLKNERKRKRTSMKLVFKNNDGVGDDKANTSLKCATFTVENAMKLLAEMIIIDELSFRFVESEGFRKSSPARFAKFKICIEEENISSNSLICLDVPTRWNSTYLMLEATEKFEKAFDRLDYHDLAYLKMKEENQNPNSIDWEVARIFTKFLSVFYEVTLRISGSLYITSNMVFEEIAPIQNCIRKYSSGSGDSPIITDVATKMQ
Homology
BLAST of Lcy10g006730 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 6.8e-13
Identity = 56/184 (30.43%), Postives = 91/184 (49.46%), Query Frame = 0

Query: 54  DKANTSLKCATFTVE---NAMKLLAEMII--IDELSFRFVESEGFRKSSPARFAKFKICI 113
           +K N  LK   F V    + +  +A+ +I  I  + +   ES  F K+SP+R  KF    
Sbjct: 326 NKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIYNIRESIKFIKASPSREEKFAEIA 385

Query: 114 EEENISSNSLICLDVPTRWNSTYLMLEATEKFEKAFDRLDYHDLAYLKMKEENQNPNSID 173
            +  I S   +CLDV T+WN+TYLML A   +++AF  L+  D  Y      N+ P++ D
Sbjct: 386 LQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFSTLETSDDNY------NEAPSAED 445

Query: 174 WEVARIFTKFLSVFYEVTLRISGSLYITSNMVFEEIAPIQNCIRKYSSGSG-DSPIITDV 232
           W+       +L + Y+    I  +   TSN+ F E   +Q    + S+ +G + P+ + +
Sbjct: 446 WKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQ---LELSNATGHEDPVFSSI 500

BLAST of Lcy10g006730 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.8e-12
Identity = 55/184 (29.89%), Postives = 90/184 (48.91%), Query Frame = 0

Query: 54  DKANTSLKCATFTVE---NAMKLLAEMII--IDELSFRFVESEGFRKSSPARFAKFKICI 113
           +K N  LK   F V    + +  +A+ +I  I  + +   ES  F K+SP+   KF    
Sbjct: 326 NKNNLMLKGQLFVVRCYAHILNAVAQDVIASIHGVIYNIRESIKFIKASPSCEEKFAEIA 385

Query: 114 EEENISSNSLICLDVPTRWNSTYLMLEATEKFEKAFDRLDYHDLAYLKMKEENQNPNSID 173
            +  I S   +CLDV T+WN+TYLML A   +++AF  L+  D  Y      N+ P++ D
Sbjct: 386 LQLEIPSTKTLCLDVTTQWNTTYLMLLAALDYKQAFSTLETSDDNY------NEAPSAED 445

Query: 174 WEVARIFTKFLSVFYEVTLRISGSLYITSNMVFEEIAPIQNCIRKYSSGSG-DSPIITDV 232
           W+       +L + Y+    I  +   TSN+ F E   +Q    + S+ +G + P+ + +
Sbjct: 446 WKKVEAACNYLKLLYDSAHSIMAAANPTSNLFFHEAWKLQ---LELSNATGREDPVFSSI 500

BLAST of Lcy10g006730 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.1e-09
Identity = 47/164 (28.66%), Postives = 78/164 (47.56%), Query Frame = 0

Query: 51  VGDDKANTSLKCATFTVE---NAMKLLAEMII--IDELSFRFVESEGFRKSSPARFAKFK 110
           + + K N  +K   F V    + +  +A+ +I  +  + +   ES  F K+S     KF 
Sbjct: 364 LSNKKDNIMIKGQLFVVRCYAHILNTVAQDVIASVHSVIYHIRESIKFIKASSVHEDKFA 423

Query: 111 ICIEEENISSNSLICLDVPTRWNSTYLMLEATEKFEKAFDRLDYHDLAYLKMKEENQNPN 170
               +  I S   +CLDV T+WN+TYLML A   +++ F  L+  D  Y      N+ P+
Sbjct: 424 EIALQLEIPSAKTLCLDVTTQWNTTYLMLLAALDYQQVFASLETCDGDY------NEAPS 483

Query: 171 SIDWEVARIFTKFLSVFYEVTLRISGSLYITSNMVFEEIAPIQN 210
           + DW+       +LS+ Y+    I  +   TSN+ F E   +Q+
Sbjct: 484 TEDWKKVEAACSYLSLLYDSAHNIMAAPNPTSNIFFHEAWKLQS 521

BLAST of Lcy10g006730 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 2.7e-09
Identity = 37/120 (30.83%), Postives = 64/120 (53.33%), Query Frame = 0

Query: 95  KSSPARFAKFKICIEEENISSNSLICLDVPTRWNSTYLMLEATEKFEKAFDRLDYHDLAY 154
           KSSP ++ +   C  E ++  +  I  DV TRWNSTYLML     ++ A  RL   D   
Sbjct: 432 KSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLKTSD--- 491

Query: 155 LKMKEENQNPNSIDWEVARIFTKFLSVFYEVTLRISGSLYITSNMVFEEIAPIQNCIRKY 214
              + +   P + +W++A    K L  F+++T  +SG+ Y T+N+ ++    I++ I ++
Sbjct: 492 -PRRYDAICPKAEEWKMALTLFKCLKKFFDLTELLSGTQYSTANLFYKGFCEIKDLIDQW 547

BLAST of Lcy10g006730 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 60.1 bits (144), Expect = 3.9e-08
Identity = 48/157 (30.57%), Postives = 74/157 (47.13%), Query Frame = 0

Query: 60  LKCATFTVE---NAMKLLAEMII--IDELSFRFVESEGFRKSSPARFAKFKICIEEENIS 119
           LK  TF V    N +  +A  ++  +  + +   ES  F K+  A   KF     E  I+
Sbjct: 299 LKGQTFAVRCYANILNAVAHGVLASVHNVIYLIRESIKFIKADDAHENKFAEIAVELKIT 358

Query: 120 SNSLICLDVPTRWNSTYLMLEATEKFEKAFDRLD-YHDLAYLKMKEENQNPNSIDWEVAR 179
           SN+ +CLDV + WN+TYLML A   + + F  L+ Y+D            P++ DW+   
Sbjct: 359 SNNSLCLDVTSEWNTTYLMLLAALDYRQVFTLLESYYD-------NYGTAPSTEDWKKVE 418

Query: 180 IFTKFLSVFYEVTLRISGS--LYITSNMVFEEIAPIQ 209
               FL + Y  TL I  +   + T+NM F +   +Q
Sbjct: 419 AACGFLKLLYAFTLNIMSAEGNHQTANMFFHDAWVLQ 448

BLAST of Lcy10g006730 vs. ExPASy TrEMBL
Match: A0A5A7U843 (Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold76G001130 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.0e-43
Identity = 103/217 (47.47%), Postives = 135/217 (62.21%), Query Frame = 0

Query: 33  ERKRKRTSMKLVFKNNDGVGDDKANTSLKCATFTVENAMKLLAEMIIIDELSFRFVESEG 92
           ++KR +T M L FK  D VGD+  ++ L C +F+++     L EMII+DEL F+FVE +G
Sbjct: 189 QKKRDQTQMTLAFKPKDKVGDN--SSQLVCESFSLDGCRDALVEMIIVDELPFKFVEDKG 248

Query: 93  FRK----------------------------SSPARFAKFKICIEEENISSNSLICLDVP 152
           F+K                            SSPARF KFK CIE E I+  S +CLDVP
Sbjct: 249 FKKFVDKLTCGNHTRFVVPSRFPVARDVLKLSSPARFLKFKKCIELEKIACKSYVCLDVP 308

Query: 153 TRWNSTYLMLEATEKFEKAFDRLDYHDLAYLKMKEENQNPNSIDWEVARIFTKFLSVFYE 212
           TRWNSTY+MLEA  KFEKAFDRL+  D +Y      + +PN  DW  AR+  +FL VFY+
Sbjct: 309 TRWNSTYMMLEAAVKFEKAFDRLEDEDASY----RHDMSPNKEDWTNARMLIRFLKVFYD 368

Query: 213 VTLRISGSLYITSNMVFEEIAPIQNCIRKYSSGSGDS 222
           VTL+ISGSLY TSN+VF +I  + NCIR  ++GS ++
Sbjct: 369 VTLKISGSLYTTSNLVFHQITVVLNCIR-LNAGSANA 398

BLAST of Lcy10g006730 vs. ExPASy TrEMBL
Match: A0A5A7U523 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43G00190 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 3.6e-41
Identity = 99/212 (46.70%), Postives = 131/212 (61.79%), Query Frame = 0

Query: 41  MKLVFKNNDGVGDDKANTSLKCATFTVENAMKLLAEMIIIDELSFRFVESEGFRK----- 100
           M L FK+ D VGD+  ++ L C +F+++     L EMII+DEL F+FVE +GF+K     
Sbjct: 1   MTLAFKSKDKVGDN--SSQLVCESFSLDGYRDALVEMIIVDELPFKFVEGKGFKKFVDKL 60

Query: 101 -----------------------SSPARFAKFKICIEEENISSNSLICLDVPTRWNSTYL 160
                                  SSPARF KFK CIE E I+  S +CLDVPTRWNSTY+
Sbjct: 61  TCGNHTRFVVPSRFTVVRDVLKLSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYM 120

Query: 161 MLEATEKFEKAFDRLDYHDLAYLKMKEENQNPNSIDWEVARIFTKFLSVFYEVTLRISGS 220
           MLEA  KFEKAFDRL+  D +Y      + + N  DW  AR+  +FL VFY+VTL+I GS
Sbjct: 121 MLEAAVKFEKAFDRLEDEDASY----RHDMSLNKEDWTNARMLIRFLKVFYDVTLKILGS 180

Query: 221 LYITSNMVFEEIAPIQNCIRKYSSGSGDSPII 225
           LY TSN+VF +I  +QNCIR  ++GS ++ ++
Sbjct: 181 LYTTSNLVFHQITVVQNCIR-LNAGSANALLV 205

BLAST of Lcy10g006730 vs. ExPASy TrEMBL
Match: A0A5D3CXI1 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004160 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-33
Identity = 76/132 (57.58%), Postives = 97/132 (73.48%), Query Frame = 0

Query: 93  FRKSSPARFAKFKICIEEENISSNSLICLDVPTRWNSTYLMLEATEKFEKAFDRLDYHDL 152
           F +SSPARF KFK CIE E I+  S +CLDVPTRWNSTY+MLEA  KFEKAFDRL+  D 
Sbjct: 229 FIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRLEDEDA 288

Query: 153 AYLKMKEENQNPNSIDWEVARIFTKFLSVFYEVTLRISGSLYITSNMVFEEIAPIQNCIR 212
           +Y      + +PN  DW  AR+  +FL VFY+VTL+ISGSLY TSN+VF +I  +QNCIR
Sbjct: 289 SY----RHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVVQNCIR 348

Query: 213 KYSSGSGDSPII 225
             ++GS ++ ++
Sbjct: 349 -LNAGSANALLV 355

BLAST of Lcy10g006730 vs. ExPASy TrEMBL
Match: A0A5D3CR68 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001050 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-33
Identity = 76/132 (57.58%), Postives = 97/132 (73.48%), Query Frame = 0

Query: 93  FRKSSPARFAKFKICIEEENISSNSLICLDVPTRWNSTYLMLEATEKFEKAFDRLDYHDL 152
           F +SSPARF KFK CIE E I+  S +CLDVPTRWNSTY+MLEA  KFEKAFDRL+  D 
Sbjct: 345 FIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRLEDEDA 404

Query: 153 AYLKMKEENQNPNSIDWEVARIFTKFLSVFYEVTLRISGSLYITSNMVFEEIAPIQNCIR 212
           +Y      + +PN  DW  AR+  +FL VFY+VTL+ISGSLY TSN+VF +I  +QNCIR
Sbjct: 405 SY----RHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVVQNCIR 464

Query: 213 KYSSGSGDSPII 225
             ++GS ++ ++
Sbjct: 465 -LNAGSANALLV 471

BLAST of Lcy10g006730 vs. ExPASy TrEMBL
Match: A0A5D3DAN8 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001750 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 1.6e-33
Identity = 76/132 (57.58%), Postives = 97/132 (73.48%), Query Frame = 0

Query: 93  FRKSSPARFAKFKICIEEENISSNSLICLDVPTRWNSTYLMLEATEKFEKAFDRLDYHDL 152
           F +SSPARF KFK CIE E I+  S +CLDVPTRWNSTY+MLEA  KFEKAFDRL+  D 
Sbjct: 280 FIRSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYMMLEAAVKFEKAFDRLEDEDA 339

Query: 153 AYLKMKEENQNPNSIDWEVARIFTKFLSVFYEVTLRISGSLYITSNMVFEEIAPIQNCIR 212
           +Y      + +PN  DW  AR+  +FL VFY+VTL+ISGSLY TSN+VF +I  +QNCIR
Sbjct: 340 SY----RHDMSPNKEDWTNARMLIRFLKVFYDVTLKISGSLYTTSNLVFHQITVVQNCIR 399

Query: 213 KYSSGSGDSPII 225
             ++GS ++ ++
Sbjct: 400 -LNAGSANALLV 406

BLAST of Lcy10g006730 vs. NCBI nr
Match: KAA0049761.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 186.8 bits (473), Expect = 2.1e-43
Identity = 103/217 (47.47%), Postives = 135/217 (62.21%), Query Frame = 0

Query: 33  ERKRKRTSMKLVFKNNDGVGDDKANTSLKCATFTVENAMKLLAEMIIIDELSFRFVESEG 92
           ++KR +T M L FK  D VGD+  ++ L C +F+++     L EMII+DEL F+FVE +G
Sbjct: 189 QKKRDQTQMTLAFKPKDKVGDN--SSQLVCESFSLDGCRDALVEMIIVDELPFKFVEDKG 248

Query: 93  FRK----------------------------SSPARFAKFKICIEEENISSNSLICLDVP 152
           F+K                            SSPARF KFK CIE E I+  S +CLDVP
Sbjct: 249 FKKFVDKLTCGNHTRFVVPSRFPVARDVLKLSSPARFLKFKKCIELEKIACKSYVCLDVP 308

Query: 153 TRWNSTYLMLEATEKFEKAFDRLDYHDLAYLKMKEENQNPNSIDWEVARIFTKFLSVFYE 212
           TRWNSTY+MLEA  KFEKAFDRL+  D +Y      + +PN  DW  AR+  +FL VFY+
Sbjct: 309 TRWNSTYMMLEAAVKFEKAFDRLEDEDASY----RHDMSPNKEDWTNARMLIRFLKVFYD 368

Query: 213 VTLRISGSLYITSNMVFEEIAPIQNCIRKYSSGSGDS 222
           VTL+ISGSLY TSN+VF +I  + NCIR  ++GS ++
Sbjct: 369 VTLKISGSLYTTSNLVFHQITVVLNCIR-LNAGSANA 398

BLAST of Lcy10g006730 vs. NCBI nr
Match: KAA0048725.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 178.3 bits (451), Expect = 7.5e-41
Identity = 99/212 (46.70%), Postives = 131/212 (61.79%), Query Frame = 0

Query: 41  MKLVFKNNDGVGDDKANTSLKCATFTVENAMKLLAEMIIIDELSFRFVESEGFRK----- 100
           M L FK+ D VGD+  ++ L C +F+++     L EMII+DEL F+FVE +GF+K     
Sbjct: 1   MTLAFKSKDKVGDN--SSQLVCESFSLDGYRDALVEMIIVDELPFKFVEGKGFKKFVDKL 60

Query: 101 -----------------------SSPARFAKFKICIEEENISSNSLICLDVPTRWNSTYL 160
                                  SSPARF KFK CIE E I+  S +CLDVPTRWNSTY+
Sbjct: 61  TCGNHTRFVVPSRFTVVRDVLKLSSPARFLKFKKCIELEKIACKSYVCLDVPTRWNSTYM 120

Query: 161 MLEATEKFEKAFDRLDYHDLAYLKMKEENQNPNSIDWEVARIFTKFLSVFYEVTLRISGS 220
           MLEA  KFEKAFDRL+  D +Y      + + N  DW  AR+  +FL VFY+VTL+I GS
Sbjct: 121 MLEAAVKFEKAFDRLEDEDASY----RHDMSLNKEDWTNARMLIRFLKVFYDVTLKILGS 180

Query: 221 LYITSNMVFEEIAPIQNCIRKYSSGSGDSPII 225
           LY TSN+VF +I  +QNCIR  ++GS ++ ++
Sbjct: 181 LYTTSNLVFHQITVVQNCIR-LNAGSANALLV 205

BLAST of Lcy10g006730 vs. NCBI nr
Match: XP_038890289.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida])

HSP 1 Score: 174.9 bits (442), Expect = 8.3e-40
Identity = 84/154 (54.55%), Postives = 116/154 (75.32%), Query Frame = 0

Query: 80  IDELSFRFVESEGFRKSSPARFAKFKICIEEENISSNSLICLDVPTRWNSTYLMLEATEK 139
           +++   R  ++  F +SSP R A FK CI+EENI+S S++CLDVPTRW+ST+ MLEA  K
Sbjct: 71  VNDSLVRIRDAVKFVRSSPTRLATFKKCIKEENINSKSMLCLDVPTRWSSTFFMLEAAVK 130

Query: 140 FEKAFDRLDYHDLAYLKMKEENQNPNSIDWEVARIFTKFLSVFYEVTLRISGSLYITSNM 199
           FEKAF+RL+ +D  Y+    E + P + DWE+ RIFTKFLSVFYEVT+R+SGSLY+TSN 
Sbjct: 131 FEKAFERLEDYDTIYM---NEEEKPTTRDWEIVRIFTKFLSVFYEVTVRLSGSLYVTSNT 190

Query: 200 VFEEIAPIQNCIRKYSSGSGDSPI-ITDVATKMQ 233
           VF E + +QNCI+KYSS +G + + + ++ TK+Q
Sbjct: 191 VFHETSIVQNCIKKYSSATGPNDVLLQEMTTKIQ 221

BLAST of Lcy10g006730 vs. NCBI nr
Match: XP_038889379.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida])

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-39
Identity = 85/144 (59.03%), Postives = 106/144 (73.61%), Query Frame = 0

Query: 80  IDELSFRFVESEGFRKSSPARFAKFKICIEEENISSNSLICLDVPTRWNSTYLMLEATEK 139
           I++   R  ++  F +SSPAR   FK CI EENI S S++CLDVP RWNSTYLMLEA  K
Sbjct: 53  INDSLVRIRDAVRFVRSSPARLVTFKKCITEENIDSKSMLCLDVPIRWNSTYLMLEAVVK 112

Query: 140 FEKAFDRLDYHDLAYLKMKEENQNPNSIDWEVARIFTKFLSVFYEVTLRISGSLYITSNM 199
           FEK F+RL  +D  Y+    E + P + DWE+ARIFTKFLSVFYEVT+R+S SLY+TSN 
Sbjct: 113 FEKVFERLKDYDTVYM---NEEEKPTTRDWEIARIFTKFLSVFYEVTIRLSRSLYVTSNT 172

Query: 200 VFEEIAPIQNCIRKYSSGSGDSPI 224
           VF EI+ +QNCIRKYSS +G + +
Sbjct: 173 VFHEISIVQNCIRKYSSATGPNDV 193

BLAST of Lcy10g006730 vs. NCBI nr
Match: XP_038904318.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida])

HSP 1 Score: 171.8 bits (434), Expect = 7.0e-39
Identity = 93/183 (50.82%), Postives = 121/183 (66.12%), Query Frame = 0

Query: 61  KCATFTVENA----------MKLLAEMIIIDELSFRFVESEGFRKSSPARFAKFKICIEE 120
           K  T TV+NA           K     +++D+ + RFV      +SSP R   FK CI E
Sbjct: 152 KVMTLTVDNASSNDTAIAYLKKRFKHGLVLDD-AVRFV------RSSPTRLVTFKKCITE 211

Query: 121 ENISSNSLICLDVPTRWNSTYLMLEATEKFEKAFDRLDYHDLAYLKMKEENQNPNSIDWE 180
           E+I S S++C D  TRWNSTYLMLEA  KFEKAF+RL+ +D  Y+    E + P + DWE
Sbjct: 212 ESIDSKSMLCHDFSTRWNSTYLMLEAAVKFEKAFERLEDYDTVYM---NEEEKPTTRDWE 271

Query: 181 VARIFTKFLSVFYEVTLRISGSLYITSNMVFEEIAPIQNCIRKYSSGSGDSPI-ITDVAT 233
           +ARIF KF SVFYEVT+R+SGSLY+TSN +F EI+ +QNCIRKYSS +G   + + ++AT
Sbjct: 272 IARIFIKFFSVFYEVTVRLSGSLYVTSNTIFHEISIVQNCIRKYSSATGPKDVLLQEMAT 324

BLAST of Lcy10g006730 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 56.6 bits (135), Expect = 3.1e-08
Identity = 36/138 (26.09%), Postives = 65/138 (47.10%), Query Frame = 0

Query: 95  KSSPARFAKFKICIEEENISSNSLICLDVPTRWNSTYLMLEATEKFEKAFDRLDYHDLAY 154
           K+S +   +F    E+  + S  ++ LD  T+WN+TY+ML A  + ++ F  LD  D  Y
Sbjct: 367 KTSESHEERFTELKEQLQVPSEKVLSLDDQTQWNTTYMMLVAASELKEVFSCLDTADPDY 426

Query: 155 LKMKEENQNPNSIDWEVARIFTKFLSVFYEVTLRISGSLYITSNMVFEEIAPIQNCIRKY 214
            K       P++ DW        FL   +E    +  +   ++   F E+   Q+ + + 
Sbjct: 427 KK------PPSAEDWRHVEALCTFLKPLFEAVSTLQSTGNPSAVTFFHEVWKTQSDLSR- 486

Query: 215 SSGSGDSPIITDVATKMQ 233
            + +G+ P +T +A  MQ
Sbjct: 487 -AIAGEDPFVTGIAKTMQ 496

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q6AVI06.8e-1330.43Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j... [more]
B9FJG35.8e-1229.89Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j... [more]
Q75HY52.1e-0928.66Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j... [more]
P087702.7e-0930.83Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2[more]
Q0JMB23.9e-0830.57Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j... [more]
Match NameE-valueIdentityDescription
A0A5A7U8431.0e-4347.47Zinc finger BED domain-containing protein RICESLEEPER 2-like OS=Cucumis melo var... [more]
A0A5A7U5233.6e-4146.70Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
A0A5D3CXI11.6e-3357.58Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
A0A5D3CR681.6e-3357.58Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
A0A5D3DAN81.6e-3357.58Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var... [more]
Match NameE-valueIdentityDescription
KAA0049761.12.1e-4347.47zinc finger BED domain-containing protein RICESLEEPER 2-like [Cucumis melo var. ... [more]
KAA0048725.17.5e-4146.70zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. ... [more]
XP_038890289.18.3e-4054.55zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida][more]
XP_038889379.12.4e-3959.03zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida][more]
XP_038904318.17.0e-3950.82zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
AT3G42170.13.1e-0826.09BED zinc finger ;hAT family dimerisation domain [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availablePANTHERPTHR23272:SF138SUBFAMILY NOT NAMEDcoord: 99..207
NoneNo IPR availablePANTHERPTHR23272BED FINGER-RELATEDcoord: 99..207
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 62..213

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy10g006730.1Lcy10g006730.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005488 binding