Lcy09g018290 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy09g018290
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	UBN2_3 domain-containing protein
Location	Chr09: 39810879 .. 39811097 (-)
RNA-Seq Expression	Lcy09g018290
Synteny	Lcy09g018290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCAACGTCACAGCCGCTGGAGGAATTCCAATCACCACCGGTTCTTCAACCACGTTCAGCAGCCCTCCTCTCAATCAATTACTAAATCAAATTACAACTATTAAGTTGGATCAGGGGAACTTCCTGTCATGGAAAAATTTAGGCCGACCCATTTTGAGGAGCTACAAACTTGAGGGCCATCTACTCGGCTCAAAACCTTATCCCCAAAATATGTAA

mRNA sequence

ATGACCAACGTCACAGCCGCTGGAGGAATTCCAATCACCACCGGTTCTTCAACCACGTTCAGCAGCCCTCCTCTCAATCAATTACTAAATCAAATTACAACTATTAAGTTGGATCAGGGGAACTTCCTGTCATGGAAAAATTTAGGCCGACCCATTTTGAGGAGCTACAAACTTGAGGGCCATCTACTCGGCTCAAAACCTTATCCCCAAAATATGTAA

Coding sequence (CDS)

ATGACCAACGTCACAGCCGCTGGAGGAATTCCAATCACCACCGGTTCTTCAACCACGTTCAGCAGCCCTCCTCTCAATCAATTACTAAATCAAATTACAACTATTAAGTTGGATCAGGGGAACTTCCTGTCATGGAAAAATTTAGGCCGACCCATTTTGAGGAGCTACAAACTTGAGGGCCATCTACTCGGCTCAAAACCTTATCCCCAAAATATGTAA

Protein sequence

MTNVTAAGGIPITTGSSTTFSSPPLNQLLNQITTIKLDQGNFLSWKNLGRPILRSYKLEGHLLGSKPYPQNM

Homology

[Close]

BLAST of Lcy09g018290 vs. ExPASy TrEMBL
Match: A0A5A7VCS1 (Putative leucine-rich repeat receptor-like protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold790G00430 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 8.4e-13
Identity = 35/54 (64.81%), Postives = 45/54 (83.33%), Query Frame = 0


Query: 17 STTFSSPPLNQLLNQITTIKLDQGNFLSWKNLGRPILRSYKLEGHLLGSKPYPQ 71
          +T+F++PPLNQ+LNQ+TTIKLD+ N+L WK L  PIL+ YKLEGHL G KP P+
Sbjct: 16 ATSFTNPPLNQILNQLTTIKLDRSNYLLWKTLALPILKGYKLEGHLTGEKPCPE 69

[Close]

BLAST of Lcy09g018290 vs. ExPASy TrEMBL
Match: A0A5D3BVJ1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold18G00450 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.3e-12
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 7  AGGIPITTGSSTTFSSPPLNQLLNQITTIKLDQGNFLSWKNLGRPILRSYKLEGHLLGSK 66
          A  + +    +T FS+PPLNQLLNQ++++KLD+GN+L WK L  PI++SYK EGHL G  
Sbjct: 2  ANAVSLVEFLTTNFSNPPLNQLLNQLSSVKLDRGNYLLWKTLALPIMKSYKFEGHLTGEN 61

Query: 67 PYP 70
          P P
Sbjct: 62 PCP 64

[Close]

BLAST of Lcy09g018290 vs. ExPASy TrEMBL
Match: A0A5A7V1E0 (Reverse transcriptase, RNA-dependent DNA polymerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005070 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.3e-12
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 7  AGGIPITTGSSTTFSSPPLNQLLNQITTIKLDQGNFLSWKNLGRPILRSYKLEGHLLGSK 66
          A  + +    +T FS+PPLNQLLNQ++++KLD+GN+L WK L  PI++SYK EGHL G  
Sbjct: 2  ANAVSLVEFLTTNFSNPPLNQLLNQLSSVKLDRGNYLLWKTLALPIMKSYKFEGHLTGEN 61

Query: 67 PYP 70
          P P
Sbjct: 62 PCP 64

[Close]

BLAST of Lcy09g018290 vs. ExPASy TrEMBL
Match: A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 9.3e-12
Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = 0


Query: 11 PITTGSSTTFSSPPLNQLLNQITTIKLDQGNFLSWKNLGRPILRSYKLEGHLLGSKPYP 70
          P    S   F+SPPLNQLLNQIT+IK+D+GNFL W+NL  PILRSYKL  +L G KP P
Sbjct: 13 PPAVVSGAVFTSPPLNQLLNQITSIKMDRGNFLLWQNLALPILRSYKLFDYLTGDKPCP 71

[Close]

BLAST of Lcy09g018290 vs. ExPASy TrEMBL
Match: A0A5A7VPY0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G001000 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 2.1e-11
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 4  VTAAGGIPITTGSSTTFSSPPLNQLLNQITTIKLDQGNFLSWKNLGRPILRSYKLEGHLL 63
          +T A  I +T   +T+F++P LNQ+LNQ+TTIKLD+GN+L WK L  PIL+SYKL  HL 
Sbjct: 1  MTNAAPISVTATPTTSFTNPLLNQILNQLTTIKLDRGNYLLWKTLALPILKSYKLNSHLF 60

Query: 64 GSKP 68
          G  P
Sbjct: 61 GESP 64

[Close]

BLAST of Lcy09g018290 vs. NCBI nr
Match: KAA0066132.1 (putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa] >TYK15175.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 82.4 bits (202), Expect = 1.7e-12
Identity = 35/54 (64.81%), Postives = 45/54 (83.33%), Query Frame = 0


Query: 17 STTFSSPPLNQLLNQITTIKLDQGNFLSWKNLGRPILRSYKLEGHLLGSKPYPQ 71
          +T+F++PPLNQ+LNQ+TTIKLD+ N+L WK L  PIL+ YKLEGHL G KP P+
Sbjct: 16 ATSFTNPPLNQILNQLTTIKLDRSNYLLWKTLALPILKGYKLEGHLTGEKPCPE 69

[Close]

BLAST of Lcy09g018290 vs. NCBI nr
Match: XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-11
Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = 0


Query: 11 PITTGSSTTFSSPPLNQLLNQITTIKLDQGNFLSWKNLGRPILRSYKLEGHLLGSKPYP 70
          P    S   F+SPPLNQLLNQIT+IK+D+GNFL W+NL  PILRSYKL  +L G KP P
Sbjct: 13 PPAVVSGAVFTSPPLNQLLNQITSIKMDRGNFLLWQNLALPILRSYKLFDYLTGDKPCP 71

[Close]

BLAST of Lcy09g018290 vs. NCBI nr
Match: KAA0060627.1 (Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-11
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 7  AGGIPITTGSSTTFSSPPLNQLLNQITTIKLDQGNFLSWKNLGRPILRSYKLEGHLLGSK 66
          A  + +    +T FS+PPLNQLLNQ++++KLD+GN+L WK L  PI++SYK EGHL G  
Sbjct: 2  ANAVSLVEFLTTNFSNPPLNQLLNQLSSVKLDRGNYLLWKTLALPIMKSYKFEGHLTGEN 61

Query: 67 PYP 70
          P P
Sbjct: 62 PCP 64

[Close]

BLAST of Lcy09g018290 vs. NCBI nr
Match: TYK02246.1 (uncharacterized protein E5676_scaffold18G00450 [Cucumis melo var. makuwa])

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-11
Identity = 34/63 (53.97%), Postives = 46/63 (73.02%), Query Frame = 0


Query: 7  AGGIPITTGSSTTFSSPPLNQLLNQITTIKLDQGNFLSWKNLGRPILRSYKLEGHLLGSK 66
          A  + +    +T FS+PPLNQLLNQ++++KLD+GN+L WK L  PI++SYK EGHL G  
Sbjct: 2  ANAVSLVEFLTTNFSNPPLNQLLNQLSSVKLDRGNYLLWKTLALPIMKSYKFEGHLTGEN 61

Query: 67 PYP 70
          P P
Sbjct: 62 PCP 64

[Close]

BLAST of Lcy09g018290 vs. NCBI nr
Match: KAA0067279.1 (uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 77.8 bits (190), Expect = 4.3e-11
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 0


Query: 4  VTAAGGIPITTGSSTTFSSPPLNQLLNQITTIKLDQGNFLSWKNLGRPILRSYKLEGHLL 63
          +T A  I +T   +T+F++P LNQ+LNQ+TTIKLD+GN+L WK L  PIL+SYKL  HL 
Sbjct: 1  MTNAAPISVTATPTTSFTNPLLNQILNQLTTIKLDRGNYLLWKTLALPILKSYKLNSHLF 60

Query: 64 GSKP 68
          G  P
Sbjct: 61 GESP 64

The following BLAST results are available for this feature:

BLAST of Lcy09g018290 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy09g018290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VCS1	8.4e-13	64.81	Putative leucine-rich repeat receptor-like protein kinase OS=Cucumis melo var. m...	[more]
A0A5D3BVJ1	9.3e-12	53.97	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7V1E0	9.3e-12	53.97	Reverse transcriptase, RNA-dependent DNA polymerase OS=Cucumis melo var. makuwa ...	[more]
A0A6J1DCW4	9.3e-12	64.41	uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5A7VPY0	2.1e-11	56.25	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lcy09g018290 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0066132.1	1.7e-12	64.81	putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. mak...	[more]
XP_022151683.1	1.9e-11	64.41	uncharacterized protein LOC111019598 [Momordica charantia]	[more]
KAA0060627.1	1.9e-11	53.97	Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa]	[more]
TYK02246.1	1.9e-11	53.97	uncharacterized protein E5676_scaffold18G00450 [Cucumis melo var. makuwa]	[more]
KAA0067279.1	4.3e-11	56.25	uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]	[more]

BLAST of Lcy09g018290 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy09g018290.1	Lcy09g018290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006259	DNA metabolic process
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity