Lcy09g015150 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g015150
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRNase H domain-containing protein
LocationChr09: 20755412 .. 20756252 (+)
RNA-Seq ExpressionLcy09g015150
SyntenyLcy09g015150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGTGCAAAGGATCGAAGAAATATTGGAGAGACTCTCCTTTCTTTCCCCGACCTGGGCCTACGTCTGTTGGGAGTCCGACGGATCTGCTATGGTGGTGTTGGAAAGGTATGACAGGGGAGGTTTTTGAAGATTTTGTGGCTATGTGCTGGTGGGTGTGGAGCAGGAGGAATAAGGAATTGTTTGGGGAAGCTGCTTTAGGTGAGGAGGGGGAGTATGGGTGGCGATGGGTTGCTGATTACCTAACCCATTTTAGGGCCTTTCATCGCAGGAAGGATGGAACTAATGTGAGGGGGGGTGAATTAGAATCTGAGTGTTGGAGTCCACCTGAGTTCCCTTATTTCAAGCTAAATACAGACATAGCAGTGGATAAAGAGCGTAATCTCAATAGCATTGGGGCAATTGTTCGAAATGAGAAAGGGGAGGTGATGCTTACCTTGATGAGGTTGGTTGAGTTTGTGCTTGAGGTGGATGTGTTAGAGGCGTTGGCGATTCGCGAAGGGCTGGCGGCTGCTGTTGATGCCGGCTTCTCGTTGGTGATGGTGGAATCGGATTCGGCGAGAGTGGTGCGCCAGATTGATTTTGCACAGAGTGACCGATCGGAGATGGGGTTTCTGATTGAGGAGATTATAAGCATTTCTCGTGATCTGAGGACTTGCTCATTCAGGTGGTGTTGTCGGGCAAGAAACAAGCTGGCGCATGAAGTTGCAAGAGTAGCGTTGAGGCTGCGGATGGAAGGTACTTGGCTGGAGGAGGTGCCGTCGGTGGTCGAAGGCTGCTACTCTGCTGAGCTGAGGACCTCTGCGTTGGATTCTAGGGCATTCTGTAATGTTCCGTAG

mRNA sequence

ATGGGAGTGCAAAGGATCGAAGAAATATTGGAGAGACTCTCCTTTCTTTCCCCGACCTGGGCCTACGTCTGTTGGGAGTCCGACGGATCTGCTATGGTGGTGTTGGAAAGGAGGAATAAGGAATTGTTTGGGGAAGCTGCTTTAGGTGAGGAGGGGGAGTATGGGTGGCGATGGGTTGCTGATTACCTAACCCATTTTAGGGCCTTTCATCGCAGGAAGGATGGAACTAATGTGAGGGGGGGTGAATTAGAATCTGAGTGTTGGAGTCCACCTGAGTTCCCTTATTTCAAGCTAAATACAGACATAGCAGTGGATAAAGAGCGTAATCTCAATAGCATTGGGGCAATTGTTCGAAATGAGAAAGGGGAGGTGATGCTTACCTTGATGAGGTTGGTTGAGTTTGTGCTTGAGGTGGATGTGTTAGAGGCGTTGGCGATTCGCGAAGGGCTGGCGGCTGCTGTTGATGCCGGCTTCTCGTTGGTGATGGTGGAATCGGATTCGGCGAGAGTGGTGCGCCAGATTGATTTTGCACAGAGTGACCGATCGGAGATGGGGTTTCTGATTGAGGAGATTATAAGCATTTCTCGTGATCTGAGGACTTGCTCATTCAGGTGGTGTTGTCGGGCAAGAAACAAGCTGGCGCATGAAGTTGCAAGAGTAGCGTTGAGGCTGCGGATGGAAGGTACTTGGCTGGAGGAGGTGCCGTCGGTGGTCGAAGGCTGCTACTCTGCTGAGCTGAGGACCTCTGCGTTGGATTCTAGGGCATTCTGTAATGTTCCGTAG

Coding sequence (CDS)

ATGGGAGTGCAAAGGATCGAAGAAATATTGGAGAGACTCTCCTTTCTTTCCCCGACCTGGGCCTACGTCTGTTGGGAGTCCGACGGATCTGCTATGGTGGTGTTGGAAAGGAGGAATAAGGAATTGTTTGGGGAAGCTGCTTTAGGTGAGGAGGGGGAGTATGGGTGGCGATGGGTTGCTGATTACCTAACCCATTTTAGGGCCTTTCATCGCAGGAAGGATGGAACTAATGTGAGGGGGGGTGAATTAGAATCTGAGTGTTGGAGTCCACCTGAGTTCCCTTATTTCAAGCTAAATACAGACATAGCAGTGGATAAAGAGCGTAATCTCAATAGCATTGGGGCAATTGTTCGAAATGAGAAAGGGGAGGTGATGCTTACCTTGATGAGGTTGGTTGAGTTTGTGCTTGAGGTGGATGTGTTAGAGGCGTTGGCGATTCGCGAAGGGCTGGCGGCTGCTGTTGATGCCGGCTTCTCGTTGGTGATGGTGGAATCGGATTCGGCGAGAGTGGTGCGCCAGATTGATTTTGCACAGAGTGACCGATCGGAGATGGGGTTTCTGATTGAGGAGATTATAAGCATTTCTCGTGATCTGAGGACTTGCTCATTCAGGTGGTGTTGTCGGGCAAGAAACAAGCTGGCGCATGAAGTTGCAAGAGTAGCGTTGAGGCTGCGGATGGAAGGTACTTGGCTGGAGGAGGTGCCGTCGGTGGTCGAAGGCTGCTACTCTGCTGAGCTGAGGACCTCTGCGTTGGATTCTAGGGCATTCTGTAATGTTCCGTAG

Protein sequence

MGVQRIEEILERLSFLSPTWAYVCWESDGSAMVVLERRNKELFGEAALGEEGEYGWRWVADYLTHFRAFHRRKDGTNVRGGELESECWSPPEFPYFKLNTDIAVDKERNLNSIGAIVRNEKGEVMLTLMRLVEFVLEVDVLEALAIREGLAAAVDAGFSLVMVESDSARVVRQIDFAQSDRSEMGFLIEEIISISRDLRTCSFRWCCRARNKLAHEVARVALRLRMEGTWLEEVPSVVEGCYSAELRTSALDSRAFCNVP
Homology
BLAST of Lcy09g015150 vs. ExPASy TrEMBL
Match: A0A5C7GQX3 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026488 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.8e-17
Identity = 70/210 (33.33%), Postives = 103/210 (49.05%), Query Frame = 0

Query: 30  SAMVVLERRNKELFGEAALGEEGEYGWRWVADYLTHFRAFHRRKDGTNVRGGELESECWS 89
           S  VV+ +R  E  GEA +         W  D+L  FR          V    +    W 
Sbjct: 27  SVQVVVTKRFGEDVGEALIPANEVV--EWAGDFLQEFRKSSAPVQPRLVSDRPVPK--WL 86

Query: 90  PPEFPYFKLNTDIAVDKERNLNSIGAIVRNEKGEVMLTLMRLVEFVLEVDVLEALAIREG 149
            P    FK+NTD A++ + N   IG ++RN +G+VML+  +         + EALA+ EG
Sbjct: 87  APPQGMFKINTDAALNVQGNSAGIGVVIRNFRGQVMLSSCKNFRTAFSPVIAEALAVLEG 146

Query: 150 LAAAVDAGFSLVMVESDSARVVRQIDFAQSDRSEMGFLIEEIISISRDLRTCSFRWCCRA 209
           L  A   GF   ++ESD+  VV+ I   +S  S++G +I++I+   RD    SFR   R 
Sbjct: 147 LRLAKLGGFFPTVLESDALTVVQDICRNESLSSDVGLVIDDILFFCRDFNFFSFRHVPRL 206

Query: 210 RNKLAHEVARVALRLRMEGTWLEEVPSVVE 240
            NK+AH +A++AL    E  W  + P  VE
Sbjct: 207 ANKVAHGLAKLALSNLGEFVWSGDCPLCVE 232

BLAST of Lcy09g015150 vs. ExPASy TrEMBL
Match: A0A2N9G0G1 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24139 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 4.5e-16
Identity = 68/216 (31.48%), Postives = 103/216 (47.69%), Query Frame = 0

Query: 20   WAYVCWESDGSAMVVLERRNKELFGEAALGEEGEYGWRWVADYLTHFRAFHRRKDGTNVR 79
            +A +CW        +  RRN+    + A  +      R   + L  F A   R    +++
Sbjct: 1336 FAVICWS-------IWYRRNRLRLQQPA--DTNTQLVRRARETLLEFHAAQDRGKQRSMQ 1395

Query: 80   GGELESECWSPPEFPYFKLNTDIAVDKERNLNSIGAIVRNEKGEVMLTLMRLVEFVLEVD 139
                    W PPE   FK+N D AV  +RN   IG I+RN +GEVM  L + + +   V+
Sbjct: 1396 PNSTTVIKWKPPEVSRFKVNYDGAVFSDRNEAGIGVIIRNHRGEVMGALSQRIPYPHSVE 1455

Query: 140  VLEALAIREGLAAAVDAGFSLVMVESDSARVVRQIDFAQSDRSEMGFLIEEIISISRDLR 199
             +EA A R  +  A D+GF+ + +E DS  +V  I       +  G LIE+I  I+R L+
Sbjct: 1456 AVEASAARSAIQFAKDSGFTNIDLEGDSTSIVEAIQLTTPCSTIYGNLIEDIRHIARGLQ 1515

Query: 200  TCSFRWCCRARNKLAHEVARVALRLRMEGTWLEEVP 236
            +  F    R  N +AH +A+ A   +   TW+E VP
Sbjct: 1516 SVQFLHVKREGNVMAHLLAKRAGINKPFETWMESVP 1542

BLAST of Lcy09g015150 vs. ExPASy TrEMBL
Match: A0A803L9N8 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 5.9e-16
Identity = 57/205 (27.80%), Postives = 106/205 (51.71%), Query Frame = 0

Query: 34  VLERRNKELFGEAALGEEGEYGWRWVADYLTHFRAFHRRKDGTNVRGGELESECWSPPEF 93
           + E RNK LF +  +  +         ++   + A + R+  T++      +  W PP  
Sbjct: 75  IWEMRNKWLFEQVRV--DPLIACSKTLNFFDEYVAANLREPTTSIERSSEVTGLWIPPTS 134

Query: 94  PYFKLNTDIAVDKERNLNSIGAIVRNEKGEVMLTLMRLVEFVLEVDVLEALAIREGLAAA 153
             +KLNTD ++ K+R    +G +VR+  G+VM+T  + +     +  +EA+A+  G+ A 
Sbjct: 135 SRYKLNTDASISKDRR-GGLGMVVRDNIGDVMMTWGKSLNGTGIISEIEAVALLFGMRAV 194

Query: 154 VDAGFSLVMVESDSARVVRQIDFAQSDRSEMGFLIEEIISISRDLRTCSFRWCCRARNKL 213
            DAGF  + V SD  +V+  ++ ++ + S    ++ +I+S +       F +C R  NK+
Sbjct: 195 FDAGFRKLEVSSDCLQVIELLNGSKHENSPTQLIVTDILSFAYSFDFVCFSFCPRLCNKV 254

Query: 214 AHEVARVALRLRMEGTWLEEVPSVV 239
           AH +A ++L L  E  W+E+ P+ V
Sbjct: 255 AHSMANLSLSLSEERFWMEDCPASV 276

BLAST of Lcy09g015150 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 7.7e-16
Identity = 61/192 (31.77%), Postives = 92/192 (47.92%), Query Frame = 0

Query: 58  WVADYLTHFRAFHRRKDGTNVRGGELESECWSPPEFPYFKLNTDIAVDKERNLNSIGAIV 117
           W  +YL  ++A  R      V         W PP  P  K+N D A  KE  +  +G I+
Sbjct: 74  WSENYLQVYQAAQRSSXSALVVCRPPRVAIWRPPAAPLLKVNVDAAFRKESFVAGVGVII 133

Query: 118 RNEKGEVMLTLMRLVEFVLEVDVLEALAIREGLAAAVDAGFSLVMVESDSARVVRQIDFA 177
           R+  G V LT +RL+    +VD +E  A+ EG+  AV+AGF    +E+DS R+   +   
Sbjct: 134 RDSTGLVYLTAIRLLARASDVDWVEGFAVYEGILLAVEAGFIRFQIETDSLRIFNLLTTD 193

Query: 178 QSDRSEMGFLIEEI-ISISRDLRTCSFRWCCRARNKLAHEVARVALRLRMEGTWLEEVPS 237
             D SE+G L   I + +S      SF +  R  N  AH +A++AL       W+EE P 
Sbjct: 194 CVDDSEVGVLCSVIKLFLSSHAERVSFSFTHRNGNAXAHLLAQLALTSPHLQIWVEEWPD 253

Query: 238 VVEGCYSAELRT 249
            +    + + R+
Sbjct: 254 EISSVLAVDCRS 265

BLAST of Lcy09g015150 vs. ExPASy TrEMBL
Match: A0A2I4ENL1 (uncharacterized protein LOC108991234 OS=Juglans regia OX=51240 GN=LOC108991234 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-15
Identity = 59/186 (31.72%), Postives = 92/186 (49.46%), Query Frame = 0

Query: 57  RWVADYLTHFRAFHRRKDG----TNVRGGELESECWSPPEFPYFKLNTDIAVDKERNLNS 116
           R   D+L  F+    +  G    ++  GGE +   W PPE  + K N D+A+D +     
Sbjct: 92  RSAKDFLNEFQQVQTQSMGQGGNSSAMGGEKK---WLPPEQSWVKANWDVALDVKARKMG 151

Query: 117 IGAIVRNEKGEVMLTLMRLVEFVLEVDVLEALAIREGLAAAVDAGFSLVMVESDSARVVR 176
            G I+RNEKGEVM T     + V+E  + E  A+R  +    D  F  V+ E D+  V+ 
Sbjct: 152 AGVIIRNEKGEVMATCHAQKQNVVEPALAECYALRTAMDFCRDLNFDKVIFEGDAQIVIN 211

Query: 177 QIDFAQSDRSEMGFLIEEIISISRDLRTCSFRWCCRARNKLAHEVARVALRLRMEGTWLE 236
            ++    D S  G +IEE+  + +  +  + ++  R  N +AH++AR AL    E  W+E
Sbjct: 212 AVNNQDEDLSFYGSIIEELKMVIKGWQGWTVKYSHRDTNAVAHKLARAALHSEEENIWIE 271

Query: 237 EVPSVV 239
           E P  V
Sbjct: 272 EAPMFV 274

BLAST of Lcy09g015150 vs. NCBI nr
Match: XP_023876296.1 (uncharacterized protein LOC111988743 [Quercus suber])

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-20
Identity = 67/194 (34.54%), Postives = 104/194 (53.61%), Query Frame = 0

Query: 57  RWV----ADYLTHFRAFHRRKDGTNVRGGELESECWSPPEFPYFKLNTDIAVDKERNLNS 116
           RW+     +YL+ F+   + +D  N+    L +  W  P  P +KLN D A+ KE N + 
Sbjct: 202 RWLNKRAREYLSEFQ---QSQDQLNILLPRLNANIWVAPTDPVYKLNFDAAIFKELNCSG 261

Query: 117 IGAIVRNEKGEVMLTLMRLVEFVLEVDVLEALAIREGLAAAVDAGFSLVMVESDSARVVR 176
           IGAI+RN KGEVM  +      V + +  E LA R+ +  A+DAGFS +++E D+A V+ 
Sbjct: 262 IGAIIRNGKGEVMAAMSAKGPLVEDSEEAETLACRKAVEFAIDAGFSELVIEGDNAAVMA 321

Query: 177 QIDFAQSDRSEMGFLIEEIISISRDLRTCSFRWCCRARNKLAHEVARVALRLRMEGTWLE 236
            +     D S +G +++++  ++  LR  SF    R  N +AH +AR A  +  +  WLE
Sbjct: 322 SLSHGGPDLSRLGHVVQDVQWLATGLRWVSFSHVKRCANTVAHGLARHAKNVMEDMIWLE 381

Query: 237 EVPSVVEGCYSAEL 247
           E P  V    S +L
Sbjct: 382 ETPPPVVEALSNDL 392

BLAST of Lcy09g015150 vs. NCBI nr
Match: XP_023904177.1 (uncharacterized protein LOC112015942 [Quercus suber])

HSP 1 Score: 109.8 bits (273), Expect = 3.7e-20
Identity = 68/209 (32.54%), Postives = 106/209 (50.72%), Query Frame = 0

Query: 31  AMVVLERRNKELFGEAALGEEGEYGW--RWVADYLTHFRAFHRRKDGTNVRGGELESECW 90
           A ++  +RN  L G    G+  E GW  +   ++L  F     + D    R        W
Sbjct: 297 AWMLWSQRNSVLHG----GKLKEPGWLNKRDVEWLEEFAQVQDQLDVLQPRA--TVGNVW 356

Query: 91  SPPEFPYFKLNTDIAVDKERNLNSIGAIVRNEKGEVMLTLMRLVEFVLEVDVLEALAIRE 150
            PP  P+FK+N D A+  +   +  GA++RNE GEVM  L  +   V   D  E LA R+
Sbjct: 357 RPPAHPFFKMNFDAAIFNDSGRSGFGAVIRNELGEVMAALSAIGPSVSSSDEAETLACRK 416

Query: 151 GLAAAVDAGFSLVMVESDSARVVRQIDFAQSDRSEMGFLIEEIISISRDLRTCSFRWCCR 210
            +  AVDAGF+ +++E DS  V++ +  +  D S +G ++ +I  +   LR  SF W  R
Sbjct: 417 AMEFAVDAGFNELIIEGDSINVIKALSSSSPDLSVVGNVVADIKCLISGLRRVSFSWVNR 476

Query: 211 ARNKLAHEVARVALRLRMEGTWLEEVPSV 238
             N++AH +A+ A  L  +  W+E+ P V
Sbjct: 477 DCNRVAHALAKFANSLEEDLYWMEDAPPV 499

BLAST of Lcy09g015150 vs. NCBI nr
Match: XP_023928118.1 (uncharacterized protein LOC112039474 [Quercus suber])

HSP 1 Score: 108.6 bits (270), Expect = 8.1e-20
Identity = 66/213 (30.99%), Postives = 115/213 (53.99%), Query Frame = 0

Query: 33  VVLERRNKELFGEAALGEEGEYGW--RWVADYLTHFRAFHRRKDGTNVRGGELESECWSP 92
           ++  +RN  +FG    G+  +  W  +W  ++L     FH+ +    +    L    W P
Sbjct: 104 IIWNQRNTVVFG----GKLKDPKWLNKWAKEFLDE---FHQAQGQLRIPVSCLGDSVWRP 163

Query: 93  PEFPYFKLNTDIAVDKERNLNSIGAIVRNEKGEVMLTLMRLVEFVLEVDVLEALAIREGL 152
           P    FKLN D  V  + + + +GA++RNE GEVM T++  V  V++  V E +A R  +
Sbjct: 164 PPDSTFKLNFDAVVFSKLSCSGVGAMIRNENGEVMATMLARVPHVVDSVVAEVIACRRAM 223

Query: 153 AAAVDAGFSLVMVESDSARVVRQIDFAQSDRSEMGFLIEEIISISRDLRTCSFRWCCRAR 212
             A  AGF+ ++VE D+  V++ +  +++D S +G +I++I  ++R  R  SF +  RA 
Sbjct: 224 KFACKAGFTDLVVEGDNLSVMKSLTTSETDLSWLGHIIQDIKWLTRSFRRVSFSYVRRAA 283

Query: 213 NKLAHEVARVALRLRMEGTWLEE-VPSVVEGCY 243
           N +A+ +AR A  +  +  W+E+  P V+E  Y
Sbjct: 284 NSVAYGLARYAKDIHEDMYWMEDNPPPVLEALY 309

BLAST of Lcy09g015150 vs. NCBI nr
Match: XP_023920779.1 (uncharacterized protein LOC112032247 [Quercus suber])

HSP 1 Score: 104.8 bits (260), Expect = 1.2e-18
Identity = 69/215 (32.09%), Postives = 114/215 (53.02%), Query Frame = 0

Query: 33  VVLERRNKELFGEAALGEEGEYGW--RWVADYLTHFRAFHRRKDGTNVRGGELESECWSP 92
           ++  +RN  +FG    G+  +  W  +W  ++L  FR   + +    +         W P
Sbjct: 55  IIWNQRNTVVFG----GKLKDPKWPNKWAKEFLDEFR---QAQGQLRIHVSCPGESVWRP 114

Query: 93  PEFPYFKLNTDIAVDKERNLNSIGAIVRNEKGEVMLTLMRLVEFVLEVDVLEALAIREGL 152
           P    FKLN D AV  E + + IGA++RN+ GEVM  +      V +  V E LA R  +
Sbjct: 115 PSVFPFKLNFDAAVFSELSCSGIGAVIRNDNGEVMAAMSARGPLVADSAVAEVLACRRAM 174

Query: 153 AAAVDAGFSLVMVESDSARVVRQIDFAQSDRSEMGFLIEEIISISRDLRTCSFRWCCRAR 212
             A +AGF+ ++VE D+  V++ +  ++ DRS +G +I++I  ++R+ R  SF +  RA 
Sbjct: 175 EFAREAGFTDLVVEGDNLCVMKALAASELDRSWLGHIIQDIKWLARNFRRISFSYVRRAA 234

Query: 213 NKLAHEVARVALRLRMEGTWLEE--VPSVVEG-CY 243
           N +AH +AR A  +  +  W+E+   P V+E  CY
Sbjct: 235 NTVAHGLARYAKYIHEDMYWMEDNHPPPVLEALCY 262

BLAST of Lcy09g015150 vs. NCBI nr
Match: XP_030942039.1 (uncharacterized protein LOC115967096 [Quercus lobata])

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-18
Identity = 59/150 (39.33%), Postives = 87/150 (58.00%), Query Frame = 0

Query: 86  ECWSPPEFPYFKLNTDIAVDKERNLNSIGAIVRNEKGEVMLTLMRLVEFVLEVDVLEALA 145
           + W PP   +FKLN D A   E   +  GA++RNEKGEVM  L      V + + +E +A
Sbjct: 122 QTWQPPPETFFKLNFDGACFDEGAASGYGAVIRNEKGEVMAALAARGGAVRDSEEVEVMA 181

Query: 146 IREGLAAAVDAGFSLVMVESDSARVVRQIDFAQSDRSEMGFLIEEIISISRDLRTCSFRW 205
            R+ L  A+DAGF+ +++E D+A V++ I  AQ D S +G + E+I  ++   R+ S+  
Sbjct: 182 CRKALEFAIDAGFTEIVLEGDNALVMKMISQAQPDLSRLGLIYEDIWCLAAGFRSISYNC 241

Query: 206 CCRARNKLAHEVARVALRLRMEGTWLEEVP 236
             R+ N +AH +AR A  L  E  WLEE P
Sbjct: 242 IRRSANGVAHSLARFARLLDNEIVWLEEDP 271

BLAST of Lcy09g015150 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 43.1 bits (100), Expect = 3.9e-04
Identity = 38/135 (28.15%), Postives = 62/135 (45.93%), Query Frame = 0

Query: 88  WSPPEFPYFKLNTDIAVDKERNLNSIGAIVRNEKGEVMLTLMRLVEFVLEVDVLEALAIR 147
           W PP   + K NTD   +++     IG ++RNEKGEV     R +  +  V   E  A+R
Sbjct: 420 WRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPKLKSVLEAELEAMR 479

Query: 148 EGLAAAVDAGFSLVMVESDSARVVRQIDFAQSDRSEMGFLIEEIISISRDLRTCSFRWCC 207
             + +     ++ V+ ESDS +V+ +I         +   I+++  +        F +  
Sbjct: 480 WAVLSLSRFQYNYVIFESDS-QVLIEILNNDEIWPSLKPTIQDLQRLLSQFTEVKFVFIP 539

Query: 208 RARNKLAHEVARVAL 223
           R  N LA  VAR +L
Sbjct: 540 REGNTLAERVARESL 553

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5C7GQX31.8e-1733.33RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026488 ... [more]
A0A2N9G0G14.5e-1631.48Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24139 PE=4 SV=1[more]
A0A803L9N85.9e-1627.80Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1[more]
A0A6J1DBJ77.7e-1631.77uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A2I4ENL11.0e-1531.72uncharacterized protein LOC108991234 OS=Juglans regia OX=51240 GN=LOC108991234 P... [more]
Match NameE-valueIdentityDescription
XP_023876296.11.3e-2034.54uncharacterized protein LOC111988743 [Quercus suber][more]
XP_023904177.13.7e-2032.54uncharacterized protein LOC112015942 [Quercus suber][more]
XP_023928118.18.1e-2030.99uncharacterized protein LOC112039474 [Quercus suber][more]
XP_023920779.11.2e-1832.09uncharacterized protein LOC112032247 [Quercus suber][more]
XP_030942039.11.5e-1839.33uncharacterized protein LOC115967096 [Quercus lobata][more]
Match NameE-valueIdentityDescription
AT4G29090.13.9e-0428.15Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 96..226
e-value: 4.4E-11
score: 44.9
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 99..219
e-value: 1.7E-21
score: 76.3
NoneNo IPR availablePANTHERPTHR33033:SF67SUBFAMILY NOT NAMEDcoord: 85..241
NoneNo IPR availablePANTHERPTHR33033POLYNUCLEOTIDYL TRANSFERASE, RIBONUCLEASE H-LIKE SUPERFAMILY PROTEIN-RELATEDcoord: 85..241
IPR044730Ribonuclease H-like domain, plant typeCDDcd06222RNase_H_likecoord: 98..219
e-value: 7.11228E-15
score: 67.3392
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 96..224

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g015150.1Lcy09g015150.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity