Lcy09g012510 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g012510
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionzf-RVT domain-containing protein
LocationChr09: 13748164 .. 13750587 (-)
RNA-Seq ExpressionLcy09g012510
SyntenyLcy09g012510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGACAAGGCCGTTCACCCAGGAGGAAGTGATTATCGCTATGAAAAATATGAACCCTACAAAAGCTCCAGGTCCTGATGGAGCTCATGCCCTGTTTTTCCAAAAGTACTGGGATATAATAGGAGAAGAAACCACTAAGGTGGCCCTGAACATTCTAAATGCGAAGGAAGTGGTGGACCCCCTAAACCACACCTACATTACGCTCATCCCAAAGAAAGAGAATGTAGAACACATGAAGGACTTCAGACCAATAAGCCTCTGCAATGTCACCTACAAAGTTGTGGCAAAAGCTTTGGCCAACAGGATGAAAAACATGCTAAAAACGGTTATATCCCCAAATCAGTCAGCTTTCGTACCGGGAAGATTGATATCTGATAATGTCCTGATTGGATTCGAAAGTATTCATGCTTTAAAGAACAAAAGACAGGGTAGAGACGGGTTCATAGCGGCAAAGCTCGATATGAGCAAGGCATATGATAGGGTGGAATGGGGCTTTATTGAAGCTATCATGACTCAAATGGGATTTCATGAGGACTGGAGAAAAAAGATTATGAATTGCATAAAATCAGTGAGATATTCTATTCTAATAAATGGCTACCCTCAAAACAAAGTGGTTCCTACCAGAGGCCTTCGACAAGGGGACCCTCTCTCCCCGTACCTCTTTCTGCTATGTGCTGAAGGTTTTACTGCTCTTTTAAACAGGGAAGAATCGATCTCTAATCTTACTGGTTTTAGTATCAATAAACATAGCCCTCCCCTTACGCATTTGTTTTTTGCAGATGACAGCATGATTTTCTTTAAAGCGAAGGAAGGAGAAATCCAATCTATGAACAGAATCCTGCAGATCTATGAAAAGGCCTCGGGTCAAACCATCAACAGAGACAAATCCATTTTTATGGCTAGCAAAAACGTTAAGGACGACATCATATCTTATTGCGAAAGATCTCTGAAAATAAAGAAAACAGACCAACTAGGCCACTACCTAGGAATGCCATCCCAAACAGGTCGAAACAAGAGAAAGGCTTTTAACTCCATCAGAGACAGAGTGAGGAAGATTCTTTCAGGGTGGAAGGAAAAACTTTTCTCCCTTGGGGGTAAAGAGGTCTTGATTAAGGCAATTGCCCAAGCAATTCCTATTTACACGATGAGTTGCTTCCGTCTCCCAAAAGGTATCAGCAACGAGATTAAAAGACTCTGTGCGAATTTCTGGTGGGGATCTCACGGAGAAAAAAGAAAAAGCCATTAGATGAAGTGGAAGAAGATGTGCAACAACAAAGAAGAGGGAGCAATGGGATTTCGAGATATTTCAATCTTTAACCAAGCTATGCTGGCAAAGCAAAGTTGGAGATTGCTAAGAAATCCTGACAGCCTCCTATACAAAGTTTTAAGGGGCAAATACTTCAAGGATGGTAATTTTCTAAAGGCTCCAATTGGGAAAAATCCATCCTTGACATGGAGGAGTATTTGTTGGGGAAGAGATCTTTTTGAAAAGGGTTTTAGATGGAAGGTAGGTAATGGTAATTATATCCATCTAAATGAAGACCCGTGGATCCCTAGAAATGGAAACTACAAGCTAAGCACTGTCCCTGATAGTCTCAAAGGAAAAACAGTGAGTGCTATTATTGATGAGAATAACAAGTGGAGAGAAGACCTTATATCTCATACTTTTGATCCTCAAGACAAGGAAGACATTCTAAGCATCCCTTTGGGATCAAAGAATTCTAAAGATGAGATAATATGGGGGAAAGATAAAAGGGGCCTTTTTTCAGTCAAGAGTGCATATCGATTGGCAAAAGACCTGAATAACATCAATGAAGCCTCAGCATCAAACCAGAACCTATCTTCGAATCTTTGGAGGAGCCTTTGGAAAACAGAAGCAATCCCAAGAGCAAAAGCTTGCGCGTGGAAAATTATCAATGATATTGTGCCAAACAAAGCAAACATTAAAAAAAGGGGGATAGACTTAAACTCTTCTTGCTCTCTCTGTGGAAAAAAAGAAGAAACATCCAGCCATCTCTTTTGGGAGTGCAAATCCTCAAAAAGAGTTTGGCTTGACATAATCCCTAATTCTCTAATTATGTTTGGTTTGTGCAAGGCAAATTGGACTCCAATGGACTATTGGCAATGGATGGTAGAAAATGGAACCAACGAAGATCATAGCAAAGTGGTGATAACGTTATGGAGCATCTGGAATGCGAGGAATAAAATAATTAACCAGCAAATCTCTCCAGACAATAAACGATTATCATCCCAAATTCAAGATGCAATCACAGAGCAATTAAAGAGAAATACCTCTTGGGCTGATCGAGAAAAGAAGGAGAAATCTGGGAACCCCCTGAATCATGAAGATTGGTCGAAACTGCCCCCCAATTGTTGGAAAATGAATTCCGACGCCGCATGGTTTGAGAAAGATAATGCATGA

mRNA sequence

ATGTTGACAAGGCCGTTCACCCAGGAGGAAGTGATTATCGCTATGAAAAATATGAACCCTACAAAAGCTCCAGGTCCTGATGGAGCTCATGCCCTGTTTTTCCAAAAGTACTGGGATATAATAGGAGAAGAAACCACTAAGGTGGCCCTGAACATTCTAAATGCGAAGGAAGTGGTGGACCCCCTAAACCACACCTACATTACGCTCATCCCAAAGAAAGAGAATCTAAGCACTGTCCCTGATAGTCTCAAAGGAAAAACAGTGAGTGCTATTATTGATGAGAATAACAAGTGGAGAGAAGACCTTATATCTCATACTTTTGATCCTCAAGACAAGGAAGACATTCTAAGCATCCCTTTGGGATCAAAGAATTCTAAAGATGAGATAATATGGGGGAAAGATAAAAGGGGCCTTTTTTCAGTCAAGAGTGCATATCGATTGGCAAAAGACCTGAATAACATCAATGAAGCCTCAGCATCAAACCAGAACCTATCTTCGAATCTTTGGAGGAGCCTTTGGAAAACAGAAGCAATCCCAAGAGCAAAAGCTTGCGCGTGGAAAATTATCAATGATATTGTGCCAAACAAAGCAAACATTAAAAAAAGGGGGATAGACTTAAACTCTTCTTGCTCTCTCTGTGGAAAAAAAGAAGAAACATCCAGCCATCTCTTTTGGGAGTGCAAATCCTCAAAAAGAGTTTGGCTTGACATAATCCCTAATTCTCTAATTATGTTTGGTTTGTGCAAGGCAAATTGGACTCCAATGGACTATTGGCAATGGATGGTAGAAAATGGAACCAACGAAGATCATAGCAAAGTGGTGATAACGTTATGGAGCATCTGGAATGCGAGGAATAAAATAATTAACCAGCAAATCTCTCCAGACAATAAACGATTATCATCCCAAATTCAAGATGCAATCACAGAGCAATTAAAGAGAAATACCTCTTGGGCTGATCGAGAAAAGAAGGAGAAATCTGGGAACCCCCTGAATCATGAAGATTGGTCGAAACTGCCCCCCAATTGTTGGAAAATGAATTCCGACGCCGCATGGTTTGAGAAAGATAATGCATGA

Coding sequence (CDS)

ATGTTGACAAGGCCGTTCACCCAGGAGGAAGTGATTATCGCTATGAAAAATATGAACCCTACAAAAGCTCCAGGTCCTGATGGAGCTCATGCCCTGTTTTTCCAAAAGTACTGGGATATAATAGGAGAAGAAACCACTAAGGTGGCCCTGAACATTCTAAATGCGAAGGAAGTGGTGGACCCCCTAAACCACACCTACATTACGCTCATCCCAAAGAAAGAGAATCTAAGCACTGTCCCTGATAGTCTCAAAGGAAAAACAGTGAGTGCTATTATTGATGAGAATAACAAGTGGAGAGAAGACCTTATATCTCATACTTTTGATCCTCAAGACAAGGAAGACATTCTAAGCATCCCTTTGGGATCAAAGAATTCTAAAGATGAGATAATATGGGGGAAAGATAAAAGGGGCCTTTTTTCAGTCAAGAGTGCATATCGATTGGCAAAAGACCTGAATAACATCAATGAAGCCTCAGCATCAAACCAGAACCTATCTTCGAATCTTTGGAGGAGCCTTTGGAAAACAGAAGCAATCCCAAGAGCAAAAGCTTGCGCGTGGAAAATTATCAATGATATTGTGCCAAACAAAGCAAACATTAAAAAAAGGGGGATAGACTTAAACTCTTCTTGCTCTCTCTGTGGAAAAAAAGAAGAAACATCCAGCCATCTCTTTTGGGAGTGCAAATCCTCAAAAAGAGTTTGGCTTGACATAATCCCTAATTCTCTAATTATGTTTGGTTTGTGCAAGGCAAATTGGACTCCAATGGACTATTGGCAATGGATGGTAGAAAATGGAACCAACGAAGATCATAGCAAAGTGGTGATAACGTTATGGAGCATCTGGAATGCGAGGAATAAAATAATTAACCAGCAAATCTCTCCAGACAATAAACGATTATCATCCCAAATTCAAGATGCAATCACAGAGCAATTAAAGAGAAATACCTCTTGGGCTGATCGAGAAAAGAAGGAGAAATCTGGGAACCCCCTGAATCATGAAGATTGGTCGAAACTGCCCCCCAATTGTTGGAAAATGAATTCCGACGCCGCATGGTTTGAGAAAGATAATGCATGA

Protein sequence

MLTRPFTQEEVIIAMKNMNPTKAPGPDGAHALFFQKYWDIIGEETTKVALNILNAKEVVDPLNHTYITLIPKKENLSTVPDSLKGKTVSAIIDENNKWREDLISHTFDPQDKEDILSIPLGSKNSKDEIIWGKDKRGLFSVKSAYRLAKDLNNINEASASNQNLSSNLWRSLWKTEAIPRAKACAWKIINDIVPNKANIKKRGIDLNSSCSLCGKKEETSSHLFWECKSSKRVWLDIIPNSLIMFGLCKANWTPMDYWQWMVENGTNEDHSKVVITLWSIWNARNKIINQQISPDNKRLSSQIQDAITEQLKRNTSWADREKKEKSGNPLNHEDWSKLPPNCWKMNSDAAWFEKDNA
Homology
BLAST of Lcy09g012510 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 4.0e-04
Identity = 24/78 (30.77%), Postives = 39/78 (50.00%), Query Frame = 0

Query: 2   LTRPFTQEEVIIAMKNMNPTKAPGPDGAHALFFQKYWDIIGEETTKVALNILNAKEVVDP 61
           L  P T +E+  A++ M   K+PG DG    FFQ +WD +G +  +V        E+   
Sbjct: 445 LETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFKKGELPLS 504

Query: 62  LNHTYITLIPKKENLSTV 80
                ++L+PKK +L  +
Sbjct: 505 CRRAVLSLLPKKGDLRLI 522

BLAST of Lcy09g012510 vs. ExPASy TrEMBL
Match: Q2QNX8 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g36390 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 5.8e-30
Identity = 86/283 (30.39%), Postives = 143/283 (50.53%), Query Frame = 0

Query: 86   KTVSAIIDENNKWREDLISHTFDPQDKEDILSIPLGSKNSKDEIIWGKDKRGLFSVKSAY 145
            K V+ ++D+N  W  D+IS  F P D E I SI L S+  +D I W  DK G FS++SAY
Sbjct: 772  KWVADLLDQNGSWDRDVISQLFWPLDGEIIKSIRLSSRQDEDFIAWYPDKMGQFSIRSAY 831

Query: 146  RLAKDLNNINEASASNQNLSSNLWRSLWKTEAIPRAKACAWKIINDIVPNKANIKKRGID 205
             LA  L N  E+S+S+ N +  +W  +WK     + K  +W+ I++ +P   N KKR  +
Sbjct: 832  MLAVQLANAGESSSSSGNDTKKVWNHVWKCNIPQKVKVFSWRAISNCLPTMVNKKKRNPE 891

Query: 206  LNSSCSLCGKKEETSSHLFWECKSSKRVWLDIIPNSLIMFGLCKANWTPMDYWQWMVENG 265
            L+  CS CG + E  +H  W C  ++R W D++ + + +  +   +    D+    +E+ 
Sbjct: 892  LSDVCSFCGLEPEDVAHALWRCPHARRYW-DLMSSEMQVQRILYGSGEGSDWILDFLESI 951

Query: 266  TNEDHSKVVITLWSIWNARNKIINQQISPD---NKRLSSQIQDAITEQLKR--------- 325
            + +D    +++LW IW  RN+I + + +P    +KR      +++ E   R         
Sbjct: 952  SEDDRPVFLMSLWRIWYTRNEITHDKAAPPVEVSKRFVRSYVNSLKEIKARPNANLGSGK 1011

Query: 326  NTSWADREKKEKSGNPLNHEDWSKLPPNCWKMNSDAAWFEKDN 357
            +    DR K +K         W K P    K+N D + +++DN
Sbjct: 1012 HVIGEDRPKCKKQSVLAK---WEKPPSGWMKLNVDGS-YQEDN 1049

BLAST of Lcy09g012510 vs. ExPASy TrEMBL
Match: Q2QNX8 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g36390 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 4.6e-03
Identity = 24/60 (40.00%), Postives = 32/60 (53.33%), Query Frame = 0

Query: 13  IAMKNMNPTKAPGPDGAHALFFQKYWDIIGEETTKVALNILNAKEVVDPLNHTYITLIPK 72
           +  + + P KAPGPDG  A FFQ+ W ++ EE  K      N   +   +N T I LIPK
Sbjct: 299 LIQEKIGPLKAPGPDGFPARFFQRNWGLLKEEVVKAVKEFFNTGVMPAGVNETAIVLIPK 358


HSP 2 Score: 139.4 bits (350), Expect = 2.9e-29
Identity = 86/271 (31.73%), Postives = 138/271 (50.92%), Query Frame = 0

Query: 88  VSAIIDENNK-WREDLISHTFDPQDKEDILSIPLGSKNSKDEIIWGKDKRGLFSVKSAYR 147
           VS +ID N + W  +LIS  F P + + IL+IPL  +   D++IW  +K G FSV+SA+ 
Sbjct: 19  VSQLIDSNTRSWNRNLISQIFSPFEAQQILNIPLSWRLPNDKLIWHWEKDGNFSVRSAHH 78

Query: 148 LAKDLNNINEASASNQNLSSNLWRSLWKTEAIPRAKACAWKIINDIVPNKANIKKRGIDL 207
           + K+ +N+N   AS+ N +  +W+++WK +A P  K   W++  DI+P +  +K++G+ L
Sbjct: 79  MIKETDNLNIPEASSSN-NQEIWKAVWKIKAPPSVKNFLWRLARDILPTRGRLKRKGLSL 138

Query: 208 NSSCSLCGKKEETSSHLFWECKSSKRVWLDIIPNSLIMFGLCKANWTPMDYWQWMVENGT 267
           ++ C LC + EE   HLF  C+  ++ W           GL   +   +    W+VE  +
Sbjct: 139 DTICLLCFEAEENRDHLFMRCRLVQQTWF------CSSLGLHIPSQRSLQ--DWLVEWLS 198

Query: 268 NED---HSKVVITLWSIWNARNKIINQQISPDNKRLSSQIQDAITEQLKRNTSWADREKK 327
           N++        ITLW IW  RN ++ Q    D + ++S   D   E       +   E  
Sbjct: 199 NKNILASQLFGITLWKIWQGRNLLVFQNTPFDPRFIASAAADFTFE-------FNGAENS 258

Query: 328 EKSGNPLNH--EDWSKLPPNCWKMNSDAAWF 353
           E    P +H  + W   PP   K+N DA  F
Sbjct: 259 EIVVVPTSHSIDPWCPPPPGMSKLNVDAGCF 273

BLAST of Lcy09g012510 vs. ExPASy TrEMBL
Match: A0A7N2N3A5 (zf-RVT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.9e-29
Identity = 80/291 (27.49%), Postives = 127/291 (43.64%), Query Frame = 0

Query: 2   LTRPFTQEEVIIAMKNMNPTKAPGPDGAHALFFQKYWDIIGEETTKVALNILNAKEVVDP 61
           LT+ FT EEV  A+K M P  APGPDG   +F++ YW  +G +     L++LN+ E    
Sbjct: 230 LTKCFTAEEVEQALKQMKPMTAPGPDGMPPIFYKAYWSTVGPDVINATLSVLNSNE---- 289

Query: 62  LNHTYITLIPKKENLSTVPDSLKGKTVSAIIDENNKWREDLISHTFDPQDKEDILSIPLG 121
                                           E   W E+ I     P +   IL+IPL 
Sbjct: 290 --------------------------------ETTCWLEERIREELMPHEANAILNIPLS 349

Query: 122 SKNSKDEIIWGKDKRGLFSVKSAYRLAKDLNNINEASASNQNLSSNLWRSLWKTEAIPRA 181
            +  +D +IW   K G+ + KSAYRL  D   + +   SN   ++ LW+ LW  +   + 
Sbjct: 350 DRRPEDTLIWQTSKNGVNTTKSAYRLLADSEALKQPGQSNPTANNGLWKKLWSLDIPNKV 409

Query: 182 KACAWKIINDIVPNKANIKKRGIDLNSSCSLCGKKEETSSHLFWECKSSKRVWLDIIPNS 241
           K   W+   + +P K N+ KR I  N  C +C  + E + H  W+C   K +W ++    
Sbjct: 410 KHFLWRASCESLPTKKNLFKRKIAHNDRCKICNGETEDTIHALWDCFVLKEIWWEM---- 469

Query: 242 LIMFGLCKAN----WTPMDYWQWMVENGTNEDHSKVVITL-WSIWNARNKI 288
                +C++N    +T        + N    + ++V  ++ W IW  RN +
Sbjct: 470 ----DICRSNLSTRFTCFRDILTGILNSQEPNQAEVFASVAWEIWRKRNAL 476

BLAST of Lcy09g012510 vs. ExPASy TrEMBL
Match: A0A803PUL2 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 3.7e-29
Identity = 88/327 (26.91%), Postives = 149/327 (45.57%), Query Frame = 0

Query: 2    LTRPFTQEEVIIAMKNMNPTKAPGPDGAHALFFQKYWDIIGEETTKVALNILNAKEVVDP 61
            L  PFT  EV  A+K M+  K+PG DG  A+F+Q++W I+G+  +   LNILN    +  
Sbjct: 855  LLAPFTPAEVDSALKTMSLDKSPGIDGISAMFYQQHWSIVGDLVSHAVLNILNTGIFLTT 914

Query: 62   LNHTYITLIPKK------------------------------------ENLSTVPDSLKG 121
            L+   +   P                                       + S +P +  G
Sbjct: 915  LSWMQVWATPLSLTWQGIRWGRELLIKGLRWKIGEGRLIRSGFDPWIPRHTSFLPLTYSG 974

Query: 122  KT---VSAIIDENNKWREDLISHTFDPQDKEDILSIPLGSKNSKDEIIWGKDKRGLFSVK 181
             +   V+ +I +  +W   L+   F P D + IL++PL    S+D++IW     G F+V+
Sbjct: 975  PSNGVVANLITDERQWNATLLQQYFSPIDVDKILTLPLSYFPSRDKLIWHHHSSGNFTVQ 1034

Query: 182  SAYRLAKDLNNINEASASNQNLSSNLWRSLWKTEAIPRAKACAWKIINDIVPNKANIKKR 241
            SAY LA  L + + +S S   ++   W+  W  +   + K   W+ I+D +P   ++ +R
Sbjct: 1035 SAYHLATSLEDEDLSSTSTSTVA--WWKLFWSLQVSQKVKIFPWRAIHDALPVATSLVRR 1094

Query: 242  GIDLNSSCSLCGKKEETSSHLFWECKSSKRVWLDIIPNSLIMFGLCKANWTPMDYWQWMV 290
             I  +S+CS+C +  E++ H  + CK +K VW  +    L       A+    DY   + 
Sbjct: 1095 KIITDSTCSICKQACESTGHALFSCKYAKAVWRSL---GLSFNWSAAASMKNGDYVTHLS 1154

BLAST of Lcy09g012510 vs. ExPASy TrEMBL
Match: A0A803QR46 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.9e-29
Identity = 106/422 (25.12%), Postives = 178/422 (42.18%), Query Frame = 0

Query: 2   LTRPFTQEEVIIAMKNMNPTKAPGPDGAHALFFQKYWDIIGEETTKVALNILNAKEVVDP 61
           L +  T EE+  A+  M+P KAPGPDG    F+Q +WD+IG +   +  N    +++   
Sbjct: 121 LLQTVTPEEIKQAIFQMHPDKAPGPDGMGPGFYQHHWDVIGPDIVHLVTNFFETEDLPLD 180

Query: 62  LNHTYITLIPKKENLSTVPD---------------------------------------- 121
           +N T + LI KKEN ST+ D                                        
Sbjct: 181 INETNLVLISKKENFSTMGDLRPIALCNASYKIMAKVLANRMRSVRRIIGPGTTTSILAH 240

Query: 122 ----------------SLKGKTVSAIIDENNK-WREDLISHTFDPQDKEDILSIPLGSKN 181
                            L   TV ++   +++ W + L+   F+ +D   ILSIPL    
Sbjct: 241 PWLSDNDNPFVTSTTLGLNHHTVDSLFHVHDRSWDDSLVRDMFNVRDSTLILSIPLSFSA 300

Query: 182 SKDEIIWGKDKRGLFSVKSAYRLAKDLNNINEASASNQNLSSNLWRSLWKTEAIPRAKAC 241
             D   W  +K G FSVKSAY+L +      + S    + +S+ WR LW  +  P+ K  
Sbjct: 301 IDDHWAWIGEKTGYFSVKSAYKLLQ-----TQKSNRPGDNNSSFWRKLWHLKIPPKVKNF 360

Query: 242 AWKIINDIVPNKANIKKRGIDLNSSCSLCGKKEETSSHLFWECKSSKRVW--LDIIPNSL 301
            W+ ++D++P    +  +G+ ++  C +C    E+++H+   C  +   W   D++P   
Sbjct: 361 MWRAVSDVLPTCLQLSSKGVSVSPMCPVCHHTAESATHILLSCPFALSCWQKADLVPYGN 420

Query: 302 IMFGLCKANWTPMDYWQWMVENGTNEDHS-KVVITLWSIWNARNKIINQQISPDNKRLSS 358
            +          + ++  +V  G ++D S  V +  WS+W A+N ++       +K+ SS
Sbjct: 421 FV--------GTVGHFLHLVFIGFDDDISCHVGMLCWSLWKAKNTLV------WDKKASS 480

BLAST of Lcy09g012510 vs. NCBI nr
Match: KAF5474581.1 (hypothetical protein F2P56_006469 [Juglans regia])

HSP 1 Score: 159.8 bits (403), Expect = 4.2e-35
Identity = 97/339 (28.61%), Postives = 165/339 (48.67%), Query Frame = 0

Query: 18  MNPTKAPGPDGAHALFFQKYWDIIGEETTKVALNILNAKEVVDPLNHTYITLIPKKEN-- 77
           M P KAPGPD     F+Q +W++I EE  +  L+ LN       LN+T++ LIPK +   
Sbjct: 1   MPPLKAPGPDDFGVCFYQSHWNVIAEEVCEAVLSTLNGNSWTPSLNYTFVALIPKVKEPV 60

Query: 78  LSTVPD-SLKGKTVSAIIDENNKWREDLISHTFDPQDKEDILSIPLGSKNSKDEIIWGKD 137
           LS +   S+  K    +++   +W E L++  F+ ++ E ILSIP+   +S+D+  WG  
Sbjct: 61  LSPITKLSIDSKVAELMVENKREWNEALVNVIFEKEEAEQILSIPISRGSSEDKAAWGPT 120

Query: 138 KRGLFSVKSAYRLAKDLNNINEASASNQNLSSNLWRSLWKTEAIPRAKACAWKIINDIVP 197
           K+GLF+V+SAY L  +     +  +S +  S + W+S+W  E     K   WK  N+++P
Sbjct: 121 KKGLFTVRSAYYLLLEKRKSLKGESSIELQSDSRWKSIWGLEVPNMVKMFLWKAANELLP 180

Query: 198 NKANIKKRGIDLNSSCSLCGKKEETSSHLFWECKSSKRVWLDIIPNSLIMFGLCKANWTP 257
            K N+  R I  +  C +C K+EE+  H  WEC ++  VW + +       G+ K     
Sbjct: 181 TKKNLFLRKIVEDRFCPVCFKEEESVIHSLWECSAANDVWANDLS------GVSKWKREG 240

Query: 258 MDY---WQWMVENGTNEDHSKVVITLWSIWNARNKIINQQISPDNKRLSSQIQDAITEQL 317
            D+   W+ ++    N    ++ I L  +W  RN  + ++     K L +   +++    
Sbjct: 241 GDFLALWERLMGGLDNTKLEEIAIQLSKVWLRRNTAVFEKRITCPKTLITTSIESLEAFK 300

Query: 318 KRNTSWADREKKEKSGNPLNHEDWSKLPPNCWKMNSDAA 351
           + N         ++    +N   W     N  K+N DA+
Sbjct: 301 QANRLTNSNNAVQQRIVTVNKTMWIPPAANFVKVNWDAS 333

BLAST of Lcy09g012510 vs. NCBI nr
Match: KAF7842590.1 (putative RNA-directed DNA polymerase [Senna tora])

HSP 1 Score: 147.5 bits (371), Expect = 2.2e-31
Identity = 103/366 (28.14%), Postives = 175/366 (47.81%), Query Frame = 0

Query: 2   LTRPFTQEEVIIAMKNMNPTKAPGPDGAHALFFQKYWDIIGEETTKVALNILNAKEVVDP 61
           L  PFT +EV  A   M+PTKAPG DG  +LF+QKYWD +GE+  ++AL+ LN       
Sbjct: 40  LDAPFTMDEVKEACFGMHPTKAPGTDGFPSLFYQKYWDTVGEDIARMALDFLNN------ 99

Query: 62  LNHTYITLIPKKENLS-----TVPDSLKGKTVSAIIDENNKWREDLISHTFDPQDKEDIL 121
                  ++P +E L       + D       +   D   +W  + ++  F+P   E ++
Sbjct: 100 ------GMLPGREVLKLGLIRRIGDGNSTGVFTDPWDGGGQWDIEKVNEVFEPLVAEAVI 159

Query: 122 SIPLGSKNSKDEIIWGKDKRGLFSVKSAYRLAKDLNNINEASASNQ-NLSSNLWRSLWKT 181
            IPL   N KD  +W  +  GLFSVKSAY++       N  S +N     S++W+ +WK 
Sbjct: 160 KIPLSRSNPKDSWMWRFNANGLFSVKSAYKVVH-----NSYSRTNTWTRYSSVWKKIWKG 219

Query: 182 EAIPRAKACAWKIINDIVPNKANIKKRGIDLNSSCSLCGKKEETSSHLFWECKSSKRVWL 241
              P+ ++  W+    I+P   N+K RG+D+++ C LCG  +E + H    C   K +W 
Sbjct: 220 NLPPKIRSFCWRACRGILPTCINLKNRGVDVDTRC-LCGLDDEDTCHALVACPVLKPLWD 279

Query: 242 DIIPNSLIMFGLCKANWTPMDYWQWMVENGTNEDHSKVVITLWSIWNARNKI-INQQ--- 301
           + +P+   + G    N   ++++   V+  + +      I  + +WN RNKI +N++   
Sbjct: 280 NYMPD---VGGPINTNVAFVEWFSNNVQRWSCKQMEIYGILAYKVWNRRNKIRLNERAEE 339

Query: 302 ---ISPDNKRLSSQIQDAITEQLKRNTSWADREKKEKSGNPLNHEDWSKLPPNCWKMNSD 355
              I  + K+L   + +A    +   T    R+ + ++   +    W        K+N D
Sbjct: 340 FNYIGEEAKKLWVTLNEA-PPNMNDTTEGTRRDDRNRA---IRDGKWEAPMWREMKVNVD 380

BLAST of Lcy09g012510 vs. NCBI nr
Match: ABA98898.1 (retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group])

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-29
Identity = 86/283 (30.39%), Postives = 143/283 (50.53%), Query Frame = 0

Query: 86   KTVSAIIDENNKWREDLISHTFDPQDKEDILSIPLGSKNSKDEIIWGKDKRGLFSVKSAY 145
            K V+ ++D+N  W  D+IS  F P D E I SI L S+  +D I W  DK G FS++SAY
Sbjct: 772  KWVADLLDQNGSWDRDVISQLFWPLDGEIIKSIRLSSRQDEDFIAWYPDKMGQFSIRSAY 831

Query: 146  RLAKDLNNINEASASNQNLSSNLWRSLWKTEAIPRAKACAWKIINDIVPNKANIKKRGID 205
             LA  L N  E+S+S+ N +  +W  +WK     + K  +W+ I++ +P   N KKR  +
Sbjct: 832  MLAVQLANAGESSSSSGNDTKKVWNHVWKCNIPQKVKVFSWRAISNCLPTMVNKKKRNPE 891

Query: 206  LNSSCSLCGKKEETSSHLFWECKSSKRVWLDIIPNSLIMFGLCKANWTPMDYWQWMVENG 265
            L+  CS CG + E  +H  W C  ++R W D++ + + +  +   +    D+    +E+ 
Sbjct: 892  LSDVCSFCGLEPEDVAHALWRCPHARRYW-DLMSSEMQVQRILYGSGEGSDWILDFLESI 951

Query: 266  TNEDHSKVVITLWSIWNARNKIINQQISPD---NKRLSSQIQDAITEQLKR--------- 325
            + +D    +++LW IW  RN+I + + +P    +KR      +++ E   R         
Sbjct: 952  SEDDRPVFLMSLWRIWYTRNEITHDKAAPPVEVSKRFVRSYVNSLKEIKARPNANLGSGK 1011

Query: 326  NTSWADREKKEKSGNPLNHEDWSKLPPNCWKMNSDAAWFEKDN 357
            +    DR K +K         W K P    K+N D + +++DN
Sbjct: 1012 HVIGEDRPKCKKQSVLAK---WEKPPSGWMKLNVDGS-YQEDN 1049

BLAST of Lcy09g012510 vs. NCBI nr
Match: ABA98898.1 (retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group])

HSP 1 Score: 52.4 bits (124), Expect = 9.5e-03
Identity = 24/60 (40.00%), Postives = 32/60 (53.33%), Query Frame = 0

Query: 13  IAMKNMNPTKAPGPDGAHALFFQKYWDIIGEETTKVALNILNAKEVVDPLNHTYITLIPK 72
           +  + + P KAPGPDG  A FFQ+ W ++ EE  K      N   +   +N T I LIPK
Sbjct: 299 LIQEKIGPLKAPGPDGFPARFFQRNWGLLKEEVVKAVKEFFNTGVMPAGVNETAIVLIPK 358


HSP 2 Score: 139.4 bits (350), Expect = 5.9e-29
Identity = 86/271 (31.73%), Postives = 138/271 (50.92%), Query Frame = 0

Query: 88  VSAIIDENNK-WREDLISHTFDPQDKEDILSIPLGSKNSKDEIIWGKDKRGLFSVKSAYR 147
           VS +ID N + W  +LIS  F P + + IL+IPL  +   D++IW  +K G FSV+SA+ 
Sbjct: 19  VSQLIDSNTRSWNRNLISQIFSPFEAQQILNIPLSWRLPNDKLIWHWEKDGNFSVRSAHH 78

Query: 148 LAKDLNNINEASASNQNLSSNLWRSLWKTEAIPRAKACAWKIINDIVPNKANIKKRGIDL 207
           + K+ +N+N   AS+ N +  +W+++WK +A P  K   W++  DI+P +  +K++G+ L
Sbjct: 79  MIKETDNLNIPEASSSN-NQEIWKAVWKIKAPPSVKNFLWRLARDILPTRGRLKRKGLSL 138

Query: 208 NSSCSLCGKKEETSSHLFWECKSSKRVWLDIIPNSLIMFGLCKANWTPMDYWQWMVENGT 267
           ++ C LC + EE   HLF  C+  ++ W           GL   +   +    W+VE  +
Sbjct: 139 DTICLLCFEAEENRDHLFMRCRLVQQTWF------CSSLGLHIPSQRSLQ--DWLVEWLS 198

Query: 268 NED---HSKVVITLWSIWNARNKIINQQISPDNKRLSSQIQDAITEQLKRNTSWADREKK 327
           N++        ITLW IW  RN ++ Q    D + ++S   D   E       +   E  
Sbjct: 199 NKNILASQLFGITLWKIWQGRNLLVFQNTPFDPRFIASAAADFTFE-------FNGAENS 258

Query: 328 EKSGNPLNH--EDWSKLPPNCWKMNSDAAWF 353
           E    P +H  + W   PP   K+N DA  F
Sbjct: 259 EIVVVPTSHSIDPWCPPPPGMSKLNVDAGCF 273

BLAST of Lcy09g012510 vs. NCBI nr
Match: GAU33706.1 (hypothetical protein TSUD_148570 [Trifolium subterraneum])

HSP 1 Score: 138.3 bits (347), Expect = 1.3e-28
Identity = 87/271 (32.10%), Postives = 140/271 (51.66%), Query Frame = 0

Query: 88  VSAIIDENNK-WREDLISHTFDPQDKEDILSIPLGSKNSKDEIIWGKDKRGLFSVKSAYR 147
           VS +ID N + W  +LIS TF P + + IL+IPL  +   D++IW  +K G FSV+SA+ 
Sbjct: 154 VSQLIDSNTRSWNRNLISQTFSPFEAQQILNIPLSWRLPNDKLIWHWEKDGNFSVRSAHH 213

Query: 148 LAKDLNNINEASASNQNLSSNLWRSLWKTEAIPRAKACAWKIINDIVPNKANIKKRGIDL 207
           + K+ +N+N   AS+ N +  +W ++WK +A P  K   W++  DI+P +  +K++G+ L
Sbjct: 214 MIKETDNLNIPEASSSN-NQEIWEAVWKIKAPPSVKNFLWRLAKDILPTRGRLKRKGLSL 273

Query: 208 NSSCSLCGKKEETSSHLFWECKSSKRVWLDIIPNSLIMFGLCKANWTPMDYWQWMVENGT 267
           ++ C LC + EE   HLF  C+  ++ W           G+   +   +    W+VE  +
Sbjct: 274 DTICPLCFEVEENRDHLFMRCRLVQQTWF------CSSLGIHVPSQRSLQ--DWLVEWLS 333

Query: 268 NED--HSKVV-ITLWSIWNARNKIINQQISPDNKRLSSQIQDAITEQLKRNTSWADREKK 327
           N++   SK+  ITLW IW  RN ++ Q    D + ++S       E       +   E  
Sbjct: 334 NKNILASKLFRITLWKIWQGRNLLVFQNTPFDPRFIASAAAYFTFE-------FNGAENS 393

Query: 328 EKSGNPLNH--EDWSKLPPNCWKMNSDAAWF 353
           E    P +H  + W   PP   K+N DA  F
Sbjct: 394 EIVVVPTSHSIDPWCPPPPGMSKLNVDAGCF 408

BLAST of Lcy09g012510 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 72.0 bits (175), Expect = 1.1e-12
Identity = 65/282 (23.05%), Postives = 118/282 (41.84%), Query Frame = 0

Query: 81  DSLKGKTVSAIIDENNK---WREDLISHTFDPQDKEDILSIPLGSKNSKDEIIWGKDKRG 140
           ++ K  T++ + +       W +  IS   D  D   I  I L      D+IIW  +  G
Sbjct: 68  ETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTG 127

Query: 141 LFSVKSAYRLAKDLNNINEASASNQNLSSNLWRSLWKTEAIPRAKACAWKIINDIVPNKA 200
            ++V+S Y L     + N  + +  + S +L   +W    +P+ K   W+ ++  +    
Sbjct: 128 EYTVRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTE 187

Query: 201 NIKKRGIDLNSSCSLCGKKEETSSHLFWECKSSKRVWLDIIPNSLIMFGLCKANWTP-MD 260
            +  RG+ ++ SC  C ++ E+ +H  + C  +   W  +  +SLI   L   ++   + 
Sbjct: 188 RLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAW-RLSDSSLIRNQLMSNDFEENIS 247

Query: 261 YWQWMVENGTNEDHSKV--VITLWSIWNARNKIINQQI--SPDNKRLSSQIQD---AITE 320
                V++ T  D  K+  V  +W IW ARN ++  +   SP    LS++ +        
Sbjct: 248 NILNFVQDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNAT 307

Query: 321 QLKRNTSWADREKKEKSGNPLNHEDWSKLPPNCWKMNSDAAW 352
           Q  + T    R+  E      N  +W   P    K N DA +
Sbjct: 308 QSHKKTPSPTRQIAE------NKIEWRNPPATYVKCNFDAGF 342

BLAST of Lcy09g012510 vs. TAIR 10
Match: AT5G18880.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 49.7 bits (117), Expect = 5.7e-06
Identity = 38/148 (25.68%), Postives = 61/148 (41.22%), Query Frame = 0

Query: 172 LWKTEAIPRAKACAWKIINDIVPNKANIKKRGIDLNSSCSLCGKKEETSSHLFWECKSSK 231
           +W  E IPR     W    + +P +  ++  G+++ SS  LC   +ET +HLF+EC  S 
Sbjct: 131 VWFKEYIPRFSLITWMSFLERLPTRDRLRGWGMNIPSSWVLCSNGDETHAHLFFECSFSL 190

Query: 232 RVWLDIIP--NSLIMFGLCKANWTPMDYWQWMVENGTNEDHSKVVITL------WSIWNA 291
            +W            FGL  A+        W+++      HS  ++ L      + +W  
Sbjct: 191 AIWEFFASKFRPSPPFGLPAAS-------SWILQLPL-RSHSTTILKLLLQSAVYHVWKE 250

Query: 292 RNKIINQQISPDNKRLSSQIQDAITEQL 312
           RN  I   IS     L   I   +  +L
Sbjct: 251 RNARIFTSISSSASSLRLAIDRTMRNRL 270

BLAST of Lcy09g012510 vs. TAIR 10
Match: AT1G33710.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 45.4 bits (106), Expect = 1.1e-04
Identity = 33/145 (22.76%), Postives = 62/145 (42.76%), Query Frame = 0

Query: 170 RSLWKTEAIPRAKACAWKIINDIVPNKANIKKRGIDLNSSCSLCGKKEETSSHLFWECKS 229
           +++W   A P+     W    D +P K  +   G+ L ++C LC    E   HLF  C+ 
Sbjct: 50  KTVWFKGATPKHAFHMWVTNLDRLPTKTRLASWGMQLQTTCGLCSLDIEDRDHLFLTCEF 109

Query: 230 SKRVWLDIIPNSLIMFGLCKANWTPMDYWQWMVENGTNEDHSKVVI--TLWSIWNARNKI 289
           +  +W   +   L +       W  +  W       +     K+++   L++IW  RN  
Sbjct: 110 ACFLW-HTVSVRLELPAFSFVVWNDLMDWTLQRNRRSPPTLRKLIVQSVLYAIWKQRNNF 169

Query: 290 I--NQQISPD--NKRLSSQIQDAIT 309
           +  ++ I P    K +  +I+++IT
Sbjct: 170 LHNHETILPSVVFKTIDREIKNSIT 193

BLAST of Lcy09g012510 vs. TAIR 10
Match: AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 43.1 bits (100), Expect = 5.4e-04
Identity = 21/80 (26.25%), Postives = 42/80 (52.50%), Query Frame = 0

Query: 164 LSSNLWRSLWKTEAIPRAKACAWKIINDIVPNKANIKKRGIDLNSSCSLCGKKEETSSHL 223
           +++N    +W  +  P+ K   WK +N+ +P  A +  R I +   C+ C +  ET +H+
Sbjct: 1   MTNNWIGDIWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRC-RDFETITHI 60

Query: 224 FWECKSSKRVWLDIIPNSLI 244
            + C  ++R   ++I  S+I
Sbjct: 61  LFNCPFAQR---EVIMKSII 76

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P143814.0e-0430.77Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... [more]
Match NameE-valueIdentityDescription
Q2QNX85.8e-3030.39Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ... [more]
Q2QNX84.6e-0340.00Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ... [more]
A0A7N2N3A52.9e-2927.49zf-RVT domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A803PUL23.7e-2926.91Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QR464.9e-2925.12Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
KAF5474581.14.2e-3528.61hypothetical protein F2P56_006469 [Juglans regia][more]
KAF7842590.12.2e-3128.14putative RNA-directed DNA polymerase [Senna tora][more]
ABA98898.11.2e-2930.39retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group][more]
ABA98898.19.5e-0340.00retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group][more]
GAU33706.11.3e-2832.10hypothetical protein TSUD_148570 [Trifolium subterraneum][more]
Match NameE-valueIdentityDescription
AT3G09510.11.1e-1223.05Ribonuclease H-like superfamily protein [more]
AT5G18880.15.7e-0625.68RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT1G33710.11.1e-0422.76RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT3G26855.15.4e-0426.25RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 139..234
e-value: 3.2E-19
score: 69.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..331
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 314..339
NoneNo IPR availablePANTHERPTHR46736FAMILY NOT NAMEDcoord: 51..355
NoneNo IPR availablePANTHERPTHR46736:SF6SUBFAMILY NOT NAMEDcoord: 51..355

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g012510.1Lcy09g012510.1mRNA