Lcy09g002740 (gene) Sponge gourd (P93075) v1

Overview
NameLcy09g002740
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRegulator of chromosome condensation (RCC1) family protein
LocationChr09: 2301647 .. 2308240 (+)
RNA-Seq ExpressionLcy09g002740
SyntenyLcy09g002740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCAATTGGGATTGGGGAACAACGAAGAGAGGGAATGGGTTTGCGCTATTAGCCCTTGAGTCTCAGAAAGTCTGTTCCGTTGTTGCTGGTAGCCGAAACTCCCTCGCCATATGCGAAGATGGCAAGGTCAGTTACGTTTGATTCGAATCGCTCTGTTTTAGCTTCTGTTCTGATCCAGGGCTTTCTGTTTCCTCATATTTCAAACTCTTGATTTCGATTTTGTGGGGGGTTTGTAGCTGTTTACGTGGGGTTGGAATCAGAGAGGAACTCTTGGGCACCCAGCAGAGACCAAAGCTGAGAACATTCCGAGCCAGGTCAAAGCTCTTGCTAATGTTAAGATCGTACAGGTAATCTATTCACGTGTGGTATTCTGCATATAATTTGTAATTTGTTTTATTTATTTTTTGCTGAATAAATTTTTAGTAGAACTTGATCAATGTTCTAGAGGAAGTTTTATATGGTGGTCCTGTTTTTTAGGCGGCTATTGGTGGGTGGCACTGTCTGGCTGTGGATGACCAAGGCCGAGCTTATGCCTGGGGTACTTGTGTTCCTTTCCTTGGCTAACTGTGTGACTGGGGATACTGGGTTTGAAAAAATTTCAGTACTAGTTATCGATGTTTTAAAATGTCAAAGTGGCATCATGGCCTTCTCTTTTTAAGAGATAAGCTCAATTTGGAGGCGGAAGCACGCATAGGAGTGCAAAAACAACAAAATCAGATATCAATCAATTATTATCTTCTTAAACAAAAATTCTAAAGGTTATTCTCAAATTCATTTTCTCAATCACTAATATAGGACCCACAAAATAATAATGGGCTAAACTACCACGGTCAATGTTGTATGCTTGTATTAATATTACATATAATAGTGAACTTCATTTCATTGAAGAATAGATGGTAAGTTGATATCATCATTCTATTCTAGCAATTACATAAAGCATACAGACTACGAGGCTTTGTGCGTACTCATAGATCCATTAACTTCTTATATCTAAAGGGCATAATTCTCTTATGAATCTTAGAAGGCATAAATCTTAAGGTTAAAAATCTGTGGCATGCCTCTGAGTGCAAGTCCCAAAAACTTTTTGAAACAATGCTAGTCTTAGAATTTACTTCCACTAACCATCTGGGATAGATAAAAAAATCTTATTTGGATTGAGTTTTAACGTTGTCTGTACTAGCTTCATTTATGCATGACAACATGAGTAACAACAGTATAGATTCCATTGTAAGTGAATTTTTTGCGTTTCCCAAGCAACTGAGAGGAGGGTTACTTGGAGCAGTTGAGGAACACATTTGAGGAAAGTTTCCCTAGTGTCTCTTATTTTAGATCCATCTAGGCAAATAAGCATGTAAAGTTTGTGTGGTGCAGGTGGTAATGAATATGGCCAGTGTGGCGAAGAACCTGAGAAGAAAGATGACACTGGTAGACCACCGAGAAGAGATATAGCAATTCCTCAACGATGTGCACCAAAGCTAATAGTTCGTCAGGTAATATATTTGTTGAGCATCTATTCTGGATCATCTTTGTGTATTACGTAGTTACTTATAGGTGCTATGCATAATACAACTTGTACTTACTGTGCTATACATGATCACATACTATGTAGTACTTTCAATTACGACAGATTGCTTGAATTCCCGGGAGTGAACCTTCTAGTCCATTACCAAGAAGTTAATATTTTTGCCCATTATCAATAATTTATTAGATACCTTTAAAGTGGATTATCTCGTGGACTATCTCAAAAGTAAAAGGGACAATCAATGGCTTCAAACATCCTTAACCTGGGTACAAGTCTTGGTCTGACCCAAAATATTAATATTCCATTAGCTTTTTGACCGCAATGTTTTAAGATCTTGCAACAGTTCCATGACAAATATTGAAATGTGCCCGACTTTGCTTTGGCTTTCATGGTTATTCTTCTCCAGAAAACTCTCATAAACTTTCATGGTTATCTTATGCCCAAAAAAAAACAAAAAGATAAATAAATAAAAACTCTCATAAAGAATATCTGCTGTAAAGTGGAGAAGGATAACCTTTCCTCTTCTCTCGTAAATATCTCTACTTTCTAACTGGTCTTCTTCATAGTCTCTGTTCCCCTCTTTTTGTCGAATAAATTTGGATAATTAAAAATCCCCCATTAAGAAAACAGTCTTTATTTGGTCCTTGGTGCTCAGATGAAAATGAGTTAATACTGAGATGCTATTCTACCAAGAAATATCTATTGATAATTGGTATTATATGTGCCAAATGTAAAGAAGATTCTCTCTCCAAATAAAATAAAATAAGGAAGATGCCCCCATCTCTTTCTCTTCTTCCCATGGCTATGTGTTTATGAAATAAGGTATTTCACTATTAAGTCCTTGGGTTATACTTATGGTTACCTTTTCAAAGTATAGGCTAAAAACTTTGTGGATCAGTATTTTGGATGTCGTACTAAAAAAGTGTGGAAGAACCTTCGAAGGAAAGGAGAGAACATTCTAGCTTTTGGGTGTGTTGTTTATTTTAGTAGTTCTGGTTATTTTTTTTTCAAAAGGTGGTAACAGATACATGGCTAGACATTTGTGTTTATGTTTAACGGAAGTTCAAATAAATTCTCATTTGGATCAAAATGTGTAATGTGATTATGTTAATCAAGATTTGCTAGGCTGGACAAGCAGACCAAGCTCGGGCAATTTGTCTAACATTACTTTTTATTGGGGCTTGCAAATGGTATAATACTCCAATGTTTTTGGGAGTCTGTTTGAATCCACCATTAACAAATCAATGTAAGGGTTGCCATGCATTTGTATAAAAGAAATTAAATTAGTGGTGACCATGATTAAAGATGGAAATTAAAATGTTCTCTCCCTTTTTTGTTTAAGACTAGCTTATTTATACTTTAACTAACCTCATGAGATAAATGTTCGGTTTTACAACATTTAGTGTCAAAGAACTTGCAGAATACTTAATGCCCTAGCTATTTTTGATACTTTCATTGGTTTTATTTTATTTATCTTACTCTATCTTGGTGTAAATTGACTCTTTCTTTTCATAATTATAGTCTATCTTCTCTCATAGCCAATTGGAAAAGTTTTGTAATCTTCCGTTGGATAGGAATCTCCTCTTTTGTAATTTCATTCGATCAATTTATTTCCTATATAGTTTTTTTTAGCTATGTGGCTAATGTAGTTTTAAATCGATGACTTCCAGGACATTGAATTTGAAACTTGCCTCTTTGATGACTAGGCTATTGAGGTCCAGATTGTTCTTGATTTAATTACATTATAGATAAATTTAGCATAATTTATTCCTGAAATTACTTGGATTTCTCTGATTCAAAATAGAACTAGACATTAAAATTATGTTGCAATTTAAATGTGCGTAGGGAGAACGCAGATCATTTAGTTAGTATGATAGGCTGGTAAAAAGATTTGGTTTGAGTCTGGCATGGCCCTTCTTTAAACTCTTGTATGTATATCTCATGGAAGATTGTTACATGCTTGTCTCAAGCGGGCTTCAGAAACATACTGATTTTTCTCCGTCATAGGTTGCTGCGGGAGGTACACACTCCGTGGTACTTACACGTGAAGGCAATGTATGGACATGGGGCCAACCATGGCCACCTGGAGATATGTATGGTCTAATAACTTTTTAATTTTGATATACCGAACACTTCTCTTTTGTTTACTTATTTTGAACTATAATGGACATTTTTGCACTGTCGTAGCCATCCATATAAATATACTAATTAATTAGGTTTGCTTATTTTAAACTATAATGTCCATCTTTGCAATGTCGTGGCCTTTTTTTTTTCTCTGTCACAAGTCACAACCACTCTTGTCATTATTGTTATTCTTACATATTTAATTTGAATTGTTTCTAGTGCTGTAGTCCGTTTTTATTTTATGTTGGGATGCTAATATATCTAGTGCTGCAGAAAGCAAATTTCTGTTCCCGTACGAGTTCAAGGGAGACTCATTGCGGTTGGGGCATTTCATAATTTGGCTCGCCAAGAAGATGGAACTTTATGGGCATGGGGTAATAATGAATATGGACAACTTGGAACTGGTGACACACAACCAAGATCACAGCCAATTCCAGTCCAGGGGCTTTCAGGCCTTACTTTGGTTTGTATTCTTTTTTTTTTACTCGACATATTTTTCTATGTTTAGCCATGAAGTATTAGCTACTGATGGCTATCTTGTTAATTATTTTACCACATCTTTATCCAAAGGTTGACATTGCAGCTGGAGGATGGCATTCAACTGCATTGACAGGTAGCGGAGAGGTTCTTTCTCTGTCTCTCTCTCCTCTCTCCACTTAATGCTGAAGATGGGTTCTCTACGCCAACGTTTATTGTTATACATTGATATTAATACATAATTTGAGAGAAGTTGATCTCCATAGAGCTGTAAAACAATTGGTGTTTTCTAGTGCATTTGCAAAGAAATACCTTCAACAATTTCGTAAAACATCGATTCTTTAATCATTTTTGGCTTGGCATTAATTCTAGTATATACTACAAACATGACTGATGTGTCCTTGTGTTGGTTGTGATGAAGTGCTTGTATTTTGTCGTATTCACCTTTTCTTGGGATTTTAGAGGGTAAAAAATTTTTATTTCCTAGTTGAAGGAGCAGTGCTTATGTCTTCAATGAGCATGGTTTATGGGCATCTGATCAAAATTTGCTGATGAATTACAGACTTGGTCAAGATTGAATGAATTGTCTTCAATGGTCTTATTGCTGTTGCAGGTTTATGGATGGGGACGGGGAGAACATGGGAGGCTTGGATTTGGAGATAATGATAAGAACAGCAAAATGGTTTCCCAGAAGGTTCAACTTCTATCTGGCGAGGACATTGTTCAGGTACGGATCTGTTATTTCATGAAAACAAGAAATGAAAGAAAAAGTAGAGTGGAGAATATTGCAAACACTAGAATTAAATTTCACGGCCGCGTTAAGAATTAGGGATTAGAGTTAGTGATGCTGTTATTATCCTTTGACAGAAGTATAAATCTTTTGAATATTCCTTACATTGATACAGGTATCATGTGGAGGCACACACTCTGTTGCAGTAACCAGTGACGGCCGCCTGTTTTCGGTTAGTCTCTCATTTGTCTTTATGAACAACGTTTCTTGAGACATCATCACACATTGAAACCGATTATGGATTTTTGTTTTTTCTAGTGTATTTTTCCAAAATAATTTTAAAATCAATACATTTCTAGAGATGATTGATTCAAAATCCTCTTTGTAAGAGTCTATTTTAGGGATAAATCATACCATATCTTGATGCATAAACTTTAAGCTTATTCTATTTTTGTTTGTCTCTTTTTAACTCTCAAATATTATAATTTGTTTTAATCCTTCGTTATGTTTTTACTAGTTAGTTAACTAAAACTTGATCTAGATATGTCTTTTATTTATTTCTCTAAGTAGATATTTATGTAGAGAAGCAAAGCACATGTGATGTGGTACTGGGAGGTCAAGTCCTAGTTTATGAAACAACCTCGTATTTTTTTAAACATGTTTAAAAATTTATAAACCAACACAAAATAAAAATGGTAAAGGATTTAAGGACCAAAATAATATTTTAAGAGACTATTATCCTAAATCATTTGTCTTAGATACGAATTACTCTAGATTTAGAATTATTTTGAAATCCACCTCTTTTTTCAAGTACTTTGTACGAAACTATATCAAAGTTTGGGGTTTCTGAAAGTTCATTGTCATTATCAACTGTCAAGTCTTGTTATATTCTTCGTCACCCTTGTTTATATGTGTATGGCAGTTTGGGCGAGGTGATCATGGGCGGCTTGGATATGGAAGGAAGGTGACAACTGGGCAACCAGAGGAAGTTACCATTTACATTCCCCCTCCTCGTGGGGCTGAGCATGGCCGTTGGATTGCCAAACTTGTGACTGCGGTGGCCGCCATACGTTGGCTCTGGTACAATGGAAGCCTGATGAATAAGCAAAATAATTAATGGTGGTTAGATTCTTAAGCTTATGAACTTTTTTTCCTTTGAAATAATAATAATTATGAGACATGGCTTGGCAGTCAGAAGGTTGGTTTTAGTGTAGTCTGGCAGAATGGATTGTAGCAAACTTCCATGTATCTGATGTAATAAAACTGCTTGTTAAGCAGATATTTGAATTCTTAGTTAAATTCCAAAACAAAAACAAGTTTTTTAAAACTTTTTTTTTTGTTTGTTTTGTTTTTAAAACTTTACTTGGTTTTTTAGAATATGAGAAAAGGGTATATGATAAAACAAATAAACTTATGGGTGGTAGCTTCCTTCTCTGTTTTCCCCTCTGCACTGCACCCCCACTTCCCCAACAAAGTCTTTTTTGCCAAATCTCGATCTGCTGTTAAAGTCATCCCATGAACAGCACAAAAACATCGAAATCTGTCAATTGGTCCTCTTCCAACCAAAGTAGTAAAAAACGAGCTTGCAACAATTTGGGAATTGGGTGTTTCACCATCGTAGATTCTAATTGCATCACTGAGGAACGGTTTGGGAATTGGGCGTTTTCTATATTCGATTTGGGAGGAATTTGGAATTGATTTTGAAGATGGGTTTTTGCCATTTTCGATTTGGGGCTAA

mRNA sequence

ATGGGCAATTGGGATTGGGGAACAACGAAGAGAGGGAATGGGTTTGCGCTATTAGCCCTTGAGTCTCAGAAAGTCTGTTCCGTTGTTGCTGGTAGCCGAAACTCCCTCGCCATATGCGAAGATGGCAAGCTGTTTACGTGGGGTTGGAATCAGAGAGGAACTCTTGGGCACCCAGCAGAGACCAAAGCTGAGAACATTCCGAGCCAGGTCAAAGCTCTTGCTAATGTTAAGATCGTACAGATTCTAATTGCATCACTGAGGAACGGTTTGGGAATTGGGCGTTTTCTATATTCGATTTGGGAGGAATTTGGAATTGATTTTGAAGATGGGTTTTTGCCATTTTCGATTTGGGGCTAA

Coding sequence (CDS)

ATGGGCAATTGGGATTGGGGAACAACGAAGAGAGGGAATGGGTTTGCGCTATTAGCCCTTGAGTCTCAGAAAGTCTGTTCCGTTGTTGCTGGTAGCCGAAACTCCCTCGCCATATGCGAAGATGGCAAGCTGTTTACGTGGGGTTGGAATCAGAGAGGAACTCTTGGGCACCCAGCAGAGACCAAAGCTGAGAACATTCCGAGCCAGGTCAAAGCTCTTGCTAATGTTAAGATCGTACAGATTCTAATTGCATCACTGAGGAACGGTTTGGGAATTGGGCGTTTTCTATATTCGATTTGGGAGGAATTTGGAATTGATTTTGAAGATGGGTTTTTGCCATTTTCGATTTGGGGCTAA

Protein sequence

MGNWDWGTTKRGNGFALLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALANVKIVQILIASLRNGLGIGRFLYSIWEEFGIDFEDGFLPFSIWG
Homology
[Close]
BLAST of Lcy09g002740 vs. ExPASy Swiss-Prot
Match: Q15751 (Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-06
Identity = 31/82 (37.80%), Postives = 45/82 (54.88%), Query Frame = 0 

Query: 2   GNWDWGTTKRGNGFALL-------ALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGT 61
           G+ D+G    GN             L+ + V  V AG R+S A+ EDG+L+TWG    G 
Sbjct: 483 GDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGDFGR 542

Query: 62  LGHPAETKAENIPSQVKALANV 77
           LGH  ++ + NIP+ VK ++NV
Sbjct: 543 LGH-GDSNSRNIPTLVKDISNV 563

[Close]
BLAST of Lcy09g002740 vs. ExPASy Swiss-Prot
Match: F2Z461 (E3 ISG15--protein ligase Herc6 OS=Mus musculus OX=10090 GN=Herc6 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 2.4e-06
Identity = 24/63 (38.10%), Postives = 38/63 (60.32%), Query Frame = 0 

Query: 19  ALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALANVKI 78
           AL   K+  V  G  +SLA+ EDG +F+WG N  G LG    ++++ IP +VK+L  + +
Sbjct: 123 ALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSLEGIPL 182

Query: 79  VQI 82
            Q+
Sbjct: 183 AQV 185

[Close]
BLAST of Lcy09g002740 vs. ExPASy Swiss-Prot
Match: Q6PAV2 (Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus OX=10090 GN=Herc4 PE=1 SV=2)

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05
Identity = 19/65 (29.23%), Postives = 42/65 (64.62%), Query Frame = 0 

Query: 17  LLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALANV 76
           ++AL++Q + +V  G  ++LA+ + G+++ WG +  G LG     +   +P  +K+L+++
Sbjct: 78  VVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIRVPRNIKSLSDI 137

Query: 77  KIVQI 82
           +IVQ+
Sbjct: 138 QIVQV 142

[Close]
BLAST of Lcy09g002740 vs. ExPASy Swiss-Prot
Match: Q9FJG9 (RCC1 domain-containing protein RUG3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=RUG3 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.2e-05
Identity = 27/89 (30.34%), Postives = 48/89 (53.93%), Query Frame = 0 

Query: 4   WDWGTTK-----RGNGFA------LLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQR 63
           W+WG        RG+         + +LE  ++  +  G  +SLA+ E+GK+ +WG    
Sbjct: 284 WNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGH 343

Query: 64  GTLGHPAETKAENIPSQVKALANVKIVQI 82
           G LG  +  + + +P++++ALA+ KIV I
Sbjct: 344 GQLG-SSSLRNQKVPTEIEALADKKIVFI 371

[Close]
BLAST of Lcy09g002740 vs. ExPASy Swiss-Prot
Match: Q9VR91 (Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster OX=7227 GN=HERC2 PE=1 SV=3)

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-05
Identity = 26/67 (38.81%), Postives = 38/67 (56.72%), Query Frame = 0 

Query: 19   ALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALANVKI 78
            AL ++K+  V  GS +S AI   G+L+TWG  + G LGH  +   +  P  V ALA  ++
Sbjct: 3121 ALRAKKIRDVACGSSHSAAISSQGELYTWGLGEYGRLGH-GDNTTQLKPKLVTALAGRRV 3180

Query: 79   VQILIAS 86
            VQ+   S
Sbjct: 3181 VQVACGS 3186

[Close]
BLAST of Lcy09g002740 vs. ExPASy TrEMBL
Match: A0A6J1BVZ7 (ultraviolet-B receptor UVR8-like OS=Momordica charantia OX=3673 GN=LOC111006247 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 5.7e-27
Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 16 ALLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 75
          A+ ALESQK CSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN
Sbjct: 31 AIKALESQKACSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 90

Query: 76 VKIVQILI 84
          VKIVQ  I
Sbjct: 91 VKIVQAAI 98

[Close]
BLAST of Lcy09g002740 vs. ExPASy TrEMBL
Match: A0A6J1JZI8 (ultraviolet-B receptor UVR8-like OS=Cucurbita maxima OX=3661 GN=LOC111489289 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.8e-27
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 16 ALLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 75
          A+ ALESQ VCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAEN+PSQVKALAN
Sbjct: 31 AIKALESQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENVPSQVKALAN 90

Query: 76 VKIVQILI 84
          VKIVQ  I
Sbjct: 91 VKIVQAAI 98

[Close]
BLAST of Lcy09g002740 vs. ExPASy TrEMBL
Match: A0A6J1FH19 (ultraviolet-B receptor UVR8-like OS=Cucurbita moschata OX=3662 GN=LOC111445329 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 9.8e-27
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 16 ALLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 75
          A+ ALESQ VCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAEN+PSQVKALAN
Sbjct: 31 AIKALESQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENVPSQVKALAN 90

Query: 76 VKIVQILI 84
          VKIVQ  I
Sbjct: 91 VKIVQAAI 98

[Close]
BLAST of Lcy09g002740 vs. ExPASy TrEMBL
Match: A0A6J1JP38 (ultraviolet-B receptor UVR8-like OS=Cucurbita maxima OX=3661 GN=LOC111487074 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.3e-26
Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 16 ALLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 75
          A+ AL SQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN
Sbjct: 31 AIKALGSQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 90

Query: 76 VKIVQILI 84
          VKIVQ  I
Sbjct: 91 VKIVQAAI 98

[Close]
BLAST of Lcy09g002740 vs. ExPASy TrEMBL
Match: A0A6J1GTX8 (ultraviolet-B receptor UVR8-like OS=Cucurbita moschata OX=3662 GN=LOC111456909 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.3e-26
Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 16 ALLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 75
          A+ AL SQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN
Sbjct: 31 AIKALGSQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 90

Query: 76 VKIVQILI 84
          VKIVQ  I
Sbjct: 91 VKIVQAAI 98

[Close]
BLAST of Lcy09g002740 vs. NCBI nr
Match: XP_022133731.1 (ultraviolet-B receptor UVR8-like [Momordica charantia])

HSP 1 Score: 130.2 bits (326), Expect = 1.2e-26
Identity = 63/68 (92.65%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 16 ALLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 75
          A+ ALESQK CSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN
Sbjct: 31 AIKALESQKACSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 90

Query: 76 VKIVQILI 84
          VKIVQ  I
Sbjct: 91 VKIVQAAI 98

[Close]
BLAST of Lcy09g002740 vs. NCBI nr
Match: XP_023551359.1 (ultraviolet-B receptor UVR8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 129.4 bits (324), Expect = 2.0e-26
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 16 ALLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 75
          A+ ALESQ VCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAEN+PSQVKALAN
Sbjct: 31 AIKALESQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENVPSQVKALAN 90

Query: 76 VKIVQILI 84
          VKIVQ  I
Sbjct: 91 VKIVQAAI 98

[Close]
BLAST of Lcy09g002740 vs. NCBI nr
Match: KAG7016066.1 (Ultraviolet-B receptor UVR8 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 129.4 bits (324), Expect = 2.0e-26
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 16 ALLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 75
          A+ ALESQ VCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAEN+PSQVKALAN
Sbjct: 31 AIKALESQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENVPSQVKALAN 90

Query: 76 VKIVQILI 84
          VKIVQ  I
Sbjct: 91 VKIVQAAI 98

[Close]
BLAST of Lcy09g002740 vs. NCBI nr
Match: XP_022939399.1 (ultraviolet-B receptor UVR8-like [Cucurbita moschata])

HSP 1 Score: 129.4 bits (324), Expect = 2.0e-26
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 16 ALLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 75
          A+ ALESQ VCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAEN+PSQVKALAN
Sbjct: 31 AIKALESQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENVPSQVKALAN 90

Query: 76 VKIVQILI 84
          VKIVQ  I
Sbjct: 91 VKIVQAAI 98

[Close]
BLAST of Lcy09g002740 vs. NCBI nr
Match: XP_022993194.1 (ultraviolet-B receptor UVR8-like [Cucurbita maxima])

HSP 1 Score: 129.4 bits (324), Expect = 2.0e-26
Identity = 62/68 (91.18%), Postives = 64/68 (94.12%), Query Frame = 0 

Query: 16 ALLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALAN 75
          A+ ALESQ VCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAEN+PSQVKALAN
Sbjct: 31 AIKALESQNVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENVPSQVKALAN 90

Query: 76 VKIVQILI 84
          VKIVQ  I
Sbjct: 91 VKIVQAAI 98

[Close]
BLAST of Lcy09g002740 vs. TAIR 10
Match: AT5G16040.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 104.4 bits (259), Expect = 6.5e-23
Identity = 51/65 (78.46%), Postives = 54/65 (83.08%), Query Frame = 0 

Query: 19 ALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALANVKI 78
          ALE   V SVV GSRNSLAIC+DGKLFTWGWNQRGTLGHP ETK E+ PS VK+LANVKI
Sbjct: 34 ALEPFNVRSVVGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKI 93

Query: 79 VQILI 84
          VQ  I
Sbjct: 94 VQAAI 98

[Close]
BLAST of Lcy09g002740 vs. TAIR 10
Match: AT3G02510.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 104.0 bits (258), Expect = 8.5e-23
Identity = 50/65 (76.92%), Postives = 54/65 (83.08%), Query Frame = 0 

Query: 19 ALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALANVKI 78
          ALE   V SVV+GSRNSLAIC+DG +FTWGWNQRGTLGH  ETK ENIPS+VKALANVKI
Sbjct: 34 ALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKI 93

Query: 79 VQILI 84
           Q  I
Sbjct: 94 TQAAI 98

[Close]
BLAST of Lcy09g002740 vs. TAIR 10
Match: AT3G02510.2 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 104.0 bits (258), Expect = 8.5e-23
Identity = 50/65 (76.92%), Postives = 54/65 (83.08%), Query Frame = 0 

Query: 19 ALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQRGTLGHPAETKAENIPSQVKALANVKI 78
          ALE   V SVV+GSRNSLAIC+DG +FTWGWNQRGTLGH  ETK ENIPS+VKALANVKI
Sbjct: 34 ALEPYSVRSVVSGSRNSLAICDDGTMFTWGWNQRGTLGHQPETKTENIPSRVKALANVKI 93

Query: 79 VQILI 84
           Q  I
Sbjct: 94 TQAAI 98

[Close]
BLAST of Lcy09g002740 vs. TAIR 10
Match: AT5G60870.1 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 50.8 bits (120), Expect = 8.5e-07
Identity = 27/89 (30.34%), Postives = 48/89 (53.93%), Query Frame = 0 

Query: 4   WDWGTTK-----RGNGFA------LLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQR 63
           W+WG        RG+         + +LE  ++  +  G  +SLA+ E+GK+ +WG    
Sbjct: 284 WNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGH 343

Query: 64  GTLGHPAETKAENIPSQVKALANVKIVQI 82
           G LG  +  + + +P++++ALA+ KIV I
Sbjct: 344 GQLG-SSSLRNQKVPTEIEALADKKIVFI 371

[Close]
BLAST of Lcy09g002740 vs. TAIR 10
Match: AT5G60870.2 (Regulator of chromosome condensation (RCC1) family protein )

HSP 1 Score: 50.8 bits (120), Expect = 8.5e-07
Identity = 27/89 (30.34%), Postives = 48/89 (53.93%), Query Frame = 0 

Query: 4   WDWGTTK-----RGNGFA------LLALESQKVCSVVAGSRNSLAICEDGKLFTWGWNQR 63
           W+WG        RG+         + +LE  ++  +  G  +SLA+ E+GK+ +WG    
Sbjct: 215 WNWGANSNYELGRGDNLGGWEPMPVPSLEGVRITQIACGGYHSLALTEEGKVLSWGHGGH 274

Query: 64  GTLGHPAETKAENIPSQVKALANVKIVQI 82
           G LG  +  + + +P++++ALA+ KIV I
Sbjct: 275 GQLG-SSSLRNQKVPTEIEALADKKIVFI 302

The following BLAST results are available for this feature:
BLAST of Lcy09g002740 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q157511.4e-0637.80Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens OX=9606 GN=HERC1 PE=1... [more]
F2Z4612.4e-0638.10E3 ISG15--protein ligase Herc6 OS=Mus musculus OX=10090 GN=Herc6 PE=2 SV=1[more]
Q6PAV21.2e-0529.23Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus OX=10090 GN=Herc4 PE=... [more]
Q9FJG91.2e-0530.34RCC1 domain-containing protein RUG3, mitochondrial OS=Arabidopsis thaliana OX=37... [more]
Q9VR911.6e-0538.81Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster OX=7227 GN... [more]
BLAST of Lcy09g002740 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1BVZ75.7e-2792.65ultraviolet-B receptor UVR8-like OS=Momordica charantia OX=3673 GN=LOC111006247 ... [more]
A0A6J1JZI89.8e-2791.18ultraviolet-B receptor UVR8-like OS=Cucurbita maxima OX=3661 GN=LOC111489289 PE=... [more]
A0A6J1FH199.8e-2791.18ultraviolet-B receptor UVR8-like OS=Cucurbita moschata OX=3662 GN=LOC111445329 P... [more]
A0A6J1JP381.3e-2692.65ultraviolet-B receptor UVR8-like OS=Cucurbita maxima OX=3661 GN=LOC111487074 PE=... [more]
A0A6J1GTX81.3e-2692.65ultraviolet-B receptor UVR8-like OS=Cucurbita moschata OX=3662 GN=LOC111456909 P... [more]
BLAST of Lcy09g002740 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022133731.11.2e-2692.65ultraviolet-B receptor UVR8-like [Momordica charantia][more]
XP_023551359.12.0e-2691.18ultraviolet-B receptor UVR8-like [Cucurbita pepo subsp. pepo][more]
KAG7016066.12.0e-2691.18Ultraviolet-B receptor UVR8 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022939399.12.0e-2691.18ultraviolet-B receptor UVR8-like [Cucurbita moschata][more]
XP_022993194.12.0e-2691.18ultraviolet-B receptor UVR8-like [Cucurbita maxima][more]
BLAST of Lcy09g002740 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G16040.16.5e-2378.46Regulator of chromosome condensation (RCC1) family protein [more]
AT3G02510.18.5e-2376.92Regulator of chromosome condensation (RCC1) family protein [more]
AT3G02510.28.5e-2376.92Regulator of chromosome condensation (RCC1) family protein [more]
AT5G60870.18.5e-0730.34Regulator of chromosome condensation (RCC1) family protein [more]
AT5G60870.28.5e-0730.34Regulator of chromosome condensation (RCC1) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 3..88
e-value: 7.4E-16
score: 60.0
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 19..81
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 41..81
e-value: 2.1E-9
score: 37.8
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 42..81
score: 10.082
NoneNo IPR availablePANTHERPTHR45622UBIQUITIN-PROTEIN LIGASE E3A-RELATEDcoord: 16..84
NoneNo IPR availablePANTHERPTHR45622:SF44REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY PROTEINcoord: 16..84

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy09g002740.1Lcy09g002740.1mRNA