Lcy08g016740 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGATTTCATTTCGGAAGGCTTATCTCTACCTCTTACAAATACCCGAAACATGAAATCTTATGGAATATTTGGTTGGATCGGTATGGAACGATCAGGTGTATTTAACGAACAATCTTGTTCTCTGGAGCAACTTTGGAAGGATGTTATAATCATTTGCCTCATCACGGTCTTCAAAACCCTCTTTTTTTATGACCACGATGCTTCTTGCATAGCTCTAAATTGGAGTACTTTTCATGGAGCAATTTATTGTTTTTGTTTCTCACATAGGCTTTTTTATGAAATATCTCTGTCCAAAAGGAAAAAAAAGTGTTAACCATGCTACAGGTTTCGAGATTGAGATCGTATTCTATACAATTGAGTGACAGGTTAGTTTTAGCCTTTTAATTTCTTCGCAATGAACTCTAAATTTGAACGAGGGATAATACAGGGGGAATAGGCTGGATCATCCGAAACTGGCAAGGCATCCCAGTGAGAGCAGGGTATCGACTCATTCAGCAGAAGTGGCCGGTTGTTTGGTTGGAAGCCATCGCTGTCTTGGACGGTATCCGGTCGATCCCTCGAGAGTCCCCCAAGCTCTTTATCGAGCTTGACTCTATTCAGGTGGTTAAGTTGCTTGGGGGAAGGAGAGGGATTTGACTGATCTTTCTAAGTTCATTGAAGAAGCTCATTTTCTTCTTCAGGCACATCATATCCAATCAATCACCCACGTATCTAGGCTTCAGAATCAGATGGCCCATCAATTGGCCCGTCGGGCTTGGTCCACAAACACTTCAGATAGTTGGAGCAGCCATTTTCCTTCATGGTTTTTAAATTTGAATAAGTTGGATACTGAGGTTTTGTATAACAGCATTGGGGGTATCTGTCCCACGGTTGGCAGCCATATGGGAGCAATTGCTCTTTCTTAA ATGGATGATTTCATTTCGGAAGGCTTATCTCTACCTCTTACAAATACCCGAAACATGAAATCTTATGGAATATTTGGTTGGATCGGGGGAATAGGCTGGATCATCCGAAACTGGCAAGGCATCCCAGTGAGAGCAGGGTATCGACTCATTCAGCAGAAGTGGCCGGTTGTTTGGTTGGAAGCCATCGCTGTCTTGGACGGTATCCGGTCGATCCCTCGAGAGTCCCCCAAGCTCTTTATCGAGCTTGACTCTATTCAGGCACATCATATCCAATCAATCACCCACGTATCTAGGCTTCAGAATCAGATGGCCCATCAATTGGCCCGTCGGGCTTGGTCCACAAACACTTCAGATAGTTGGAGCAGCCATTTTCCTTCATGGTTTTTAAATTTGAATAAGTTGGATACTGAGGTTTTGTATAACAGCATTGGGGGTATCTGTCCCACGGTTGGCAGCCATATGGGAGCAATTGCTCTTTCTTAA ATGGATGATTTCATTTCGGAAGGCTTATCTCTACCTCTTACAAATACCCGAAACATGAAATCTTATGGAATATTTGGTTGGATCGGGGGAATAGGCTGGATCATCCGAAACTGGCAAGGCATCCCAGTGAGAGCAGGGTATCGACTCATTCAGCAGAAGTGGCCGGTTGTTTGGTTGGAAGCCATCGCTGTCTTGGACGGTATCCGGTCGATCCCTCGAGAGTCCCCCAAGCTCTTTATCGAGCTTGACTCTATTCAGGCACATCATATCCAATCAATCACCCACGTATCTAGGCTTCAGAATCAGATGGCCCATCAATTGGCCCGTCGGGCTTGGTCCACAAACACTTCAGATAGTTGGAGCAGCCATTTTCCTTCATGGTTTTTAAATTTGAATAAGTTGGATACTGAGGTTTTGTATAACAGCATTGGGGGTATCTGTCCCACGGTTGGCAGCCATATGGGAGCAATTGCTCTTTCTTAA MDDFISEGLSLPLTNTRNMKSYGIFGWIGGIGWIIRNWQGIPVRAGYRLIQQKWPVVWLEAIAVLDGIRSIPRESPKLFIELDSIQAHHIQSITHVSRLQNQMAHQLARRAWSTNTSDSWSSHFPSWFLNLNKLDTEVLYNSIGGICPTVGSHMGAIALS Homology
BLAST of Lcy08g016740 vs. ExPASy TrEMBL
Match: A0A6J1CP26 (uncharacterized protein LOC111013412 OS=Momordica charantia OX=3673 GN=LOC111013412 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.3e-05 Identity = 36/111 (32.43%), Postives = 61/111 (54.95%), Query Frame = 0
BLAST of Lcy08g016740 vs. ExPASy TrEMBL
Match: A0A6J1DSV1 (uncharacterized protein LOC111023608 OS=Momordica charantia OX=3673 GN=LOC111023608 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 8.4e-05 Identity = 36/119 (30.25%), Postives = 61/119 (51.26%), Query Frame = 0
BLAST of Lcy08g016740 vs. ExPASy TrEMBL
Match: A0A6J1DNV9 (uncharacterized protein LOC111022403 OS=Momordica charantia OX=3673 GN=LOC111022403 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 8.4e-05 Identity = 44/134 (32.84%), Postives = 56/134 (41.79%), Query Frame = 0
BLAST of Lcy08g016740 vs. ExPASy TrEMBL
Match: A0A7J6I8Y3 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_014459 PE=4 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 7.1e-04 Identity = 34/134 (25.37%), Postives = 60/134 (44.78%), Query Frame = 0
BLAST of Lcy08g016740 vs. NCBI nr
Match: XP_022143535.1 (uncharacterized protein LOC111013412 [Momordica charantia]) HSP 1 Score: 59.7 bits (143), Expect = 2.7e-05 Identity = 36/111 (32.43%), Postives = 61/111 (54.95%), Query Frame = 0
BLAST of Lcy08g016740 vs. NCBI nr
Match: XP_022155262.1 (uncharacterized protein LOC111022403 [Momordica charantia]) HSP 1 Score: 57.0 bits (136), Expect = 1.7e-04 Identity = 44/134 (32.84%), Postives = 56/134 (41.79%), Query Frame = 0
BLAST of Lcy08g016740 vs. NCBI nr
Match: XP_022156777.1 (uncharacterized protein LOC111023608 [Momordica charantia]) HSP 1 Score: 57.0 bits (136), Expect = 1.7e-04 Identity = 36/119 (30.25%), Postives = 61/119 (51.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|