Lcy08g004170 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACAACCAGAGTTCTTAGACAAAGTTAAAATGAGTTCCAAATCCAATAAGGCATTTGCTTTTTTGGGTCTTGTCTTGGCCGCCATCATCTTCGACATCTCCTCAAAAGTGGTGGCAAGAGACCTTTTACACACTTCCAAGTACGACCAGGGAGGTCTCGGCGGCCGCGGTGGCTCCGCCGACAGCCCTGGCTGCGGTAACTATGCAAGATGCGGTGGATACGGTGGCAGCGGTTGCCGGCATGGTTGCTGCGGTGACAATCGCGGTGGTCGGTGCAGCAAGTGCTGTAGTTATGCCAGTGAAGTTGCATATGTAAGATCCTGAGACAGGATGGATTGTTACAATTACACTCACGAACTTTTAATCGTAAAATTGATCTTCTACGAATTTTACTAACTATTAAAACATTTTTGTGTTTGTCGACATTGAGTTTATCTTCATCAAATTTCTTTCAACTACTTTGCTAGAGATAGAACCAACGAAAGAAGATTAAAGAGTTTACCTAAATTGAAATGCAAAGCTCGATCGAGTGAG AACAACCAGAGTTCTTAGACAAAGTTAAAATGAGTTCCAAATCCAATAAGGCATTTGCTTTTTTGGGTCTTGTCTTGGCCGCCATCATCTTCGACATCTCCTCAAAAGTGGTGGCAAGAGACCTTTTACACACTTCCAAGTACGACCAGGGAGGTCTCGGCGGCCGCGGTGGCTCCGCCGACAGCCCTGGCTGCGGTAACTATGCAAGATGCGGTGGATACGGTGGCAGCGGTTGCCGGCATGGTTGCTGCGGTGACAATCGCGGTGGTCGGTGCAGCAAGTGCTGTAGTTATGCCAGTGAAGTTGCATATGTAAGATCCTGAGACAGGATGGATTGTTACAATTACACTCACGAACTTTTAATCGTAAAATTGATCTTCTACGAATTTTACTAACTATTAAAACATTTTTGTGTTTGTCGACATTGAGTTTATCTTCATCAAATTTCTTTCAACTACTTTGCTAGAGATAGAACCAACGAAAGAAGATTAAAGAGTTTACCTAAATTGAAATGCAAAGCTCGATCGAGTGAG ATGAGTTCCAAATCCAATAAGGCATTTGCTTTTTTGGGTCTTGTCTTGGCCGCCATCATCTTCGACATCTCCTCAAAAGTGGTGGCAAGAGACCTTTTACACACTTCCAAGTACGACCAGGGAGGTCTCGGCGGCCGCGGTGGCTCCGCCGACAGCCCTGGCTGCGGTAACTATGCAAGATGCGGTGGATACGGTGGCAGCGGTTGCCGGCATGGTTGCTGCGGTGACAATCGCGGTGGTCGGTGCAGCAAGTGCTGTAGTTATGCCAGTGAAGTTGCATATGTAAGATCCTGA MSSKSNKAFAFLGLVLAAIIFDISSKVVARDLLHTSKYDQGGLGGRGGSADSPGCGNYARCGGYGGSGCRHGCCGDNRGGRCSKCCSYASEVAYVRS Homology
BLAST of Lcy08g004170 vs. ExPASy TrEMBL
Match: A0A6J1ERA6 (glycine-rich protein DC7.1-like OS=Cucurbita moschata OX=3662 GN=LOC111437089 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.1e-18 Identity = 60/94 (63.83%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of Lcy08g004170 vs. ExPASy TrEMBL
Match: A0A6J1JMN0 (glycine-rich protein DC7.1-like OS=Cucurbita maxima OX=3661 GN=LOC111486603 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 7.6e-17 Identity = 57/93 (61.29%), Postives = 63/93 (67.74%), Query Frame = 0
BLAST of Lcy08g004170 vs. ExPASy TrEMBL
Match: A0A5D3BTN8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00260 PE=4 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 3.2e-15 Identity = 52/102 (50.98%), Postives = 66/102 (64.71%), Query Frame = 0
BLAST of Lcy08g004170 vs. ExPASy TrEMBL
Match: A0A0A0K6K9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G037550 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 7.8e-14 Identity = 51/101 (50.50%), Postives = 65/101 (64.36%), Query Frame = 0
BLAST of Lcy08g004170 vs. ExPASy TrEMBL
Match: A0A067F4R8 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g032762mg PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 6.6e-05 Identity = 46/106 (43.40%), Postives = 53/106 (50.00%), Query Frame = 0
BLAST of Lcy08g004170 vs. NCBI nr
Match: XP_022930692.1 (glycine-rich protein DC7.1-like [Cucurbita moschata]) HSP 1 Score: 102.4 bits (254), Expect = 2.2e-18 Identity = 60/94 (63.83%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of Lcy08g004170 vs. NCBI nr
Match: XP_023530312.1 (glycine-rich protein DC7.1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 100.5 bits (249), Expect = 8.3e-18 Identity = 59/94 (62.77%), Postives = 66/94 (70.21%), Query Frame = 0
BLAST of Lcy08g004170 vs. NCBI nr
Match: KAG6589123.1 (hypothetical protein SDJN03_17688, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 99.8 bits (247), Expect = 1.4e-17 Identity = 59/94 (62.77%), Postives = 65/94 (69.15%), Query Frame = 0
BLAST of Lcy08g004170 vs. NCBI nr
Match: XP_022989540.1 (glycine-rich protein DC7.1-like [Cucurbita maxima]) HSP 1 Score: 96.3 bits (238), Expect = 1.6e-16 Identity = 57/93 (61.29%), Postives = 63/93 (67.74%), Query Frame = 0
BLAST of Lcy08g004170 vs. NCBI nr
Match: KAA0059145.1 (hypothetical protein E6C27_scaffold430G00610 [Cucumis melo var. makuwa] >TYK02545.1 hypothetical protein E5676_scaffold201G00260 [Cucumis melo var. makuwa]) HSP 1 Score: 90.9 bits (224), Expect = 6.6e-15 Identity = 52/102 (50.98%), Postives = 66/102 (64.71%), Query Frame = 0
BLAST of Lcy08g004170 vs. TAIR 10
Match: AT2G05380.1 (glycine-rich protein 3 short isoform ) HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04 Identity = 30/60 (50.00%), Postives = 32/60 (53.33%), Query Frame = 0
BLAST of Lcy08g004170 vs. TAIR 10
Match: AT2G05520.5 (glycine-rich protein 3 ) HSP 1 Score: 43.5 bits (101), Expect = 1.1e-04 Identity = 38/103 (36.89%), Postives = 47/103 (45.63%), Query Frame = 0
BLAST of Lcy08g004170 vs. TAIR 10
Match: AT2G05380.2 (glycine-rich protein 3 short isoform ) HSP 1 Score: 43.1 bits (100), Expect = 1.5e-04 Identity = 40/102 (39.22%), Postives = 48/102 (47.06%), Query Frame = 0
BLAST of Lcy08g004170 vs. TAIR 10
Match: AT2G05520.6 (glycine-rich protein 3 ) HSP 1 Score: 42.4 bits (98), Expect = 2.5e-04 Identity = 40/109 (36.70%), Postives = 49/109 (44.95%), Query Frame = 0
BLAST of Lcy08g004170 vs. TAIR 10
Match: AT2G05520.1 (glycine-rich protein 3 ) HSP 1 Score: 40.4 bits (93), Expect = 9.5e-04 Identity = 27/55 (49.09%), Postives = 30/55 (54.55%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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