Lcy08g003660 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy08g003660
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr08: 4859354 .. 4862056 (-)
RNA-Seq Expression	Lcy08g003660
Synteny	Lcy08g003660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAACTCTCCGCACTATCCCCTCGCTAAAACCCTACACCCATTTCACCCTTCATTGTCATCGATCAGTTTCCGACTGATAGCGATCTCTTCATCAATTTCCCCGCTCGAGATTCTCATGGGAGCCTTGCAGTTGCAATTTCAATCTCGCCTTCGTGTTTCGAAGATTTTGTCTTCGACAATTTGGAAATGGGACAGAGATTCTCCTCTGCTTCACGATCCATTGCGATCGCCGGATTTCTCACTCTCGCCGGTGCAATCTCGCTGTTTTAGCTCCAATCCCATGGATGACGATTGGGCCTTCTCAAACTCTGAGCCGAGAAGCAGTCCGCCGCATCGTCGTTCTCCTCCGGATCCTCGCGAAGCTCGTCGAGTTCCCAAATTCACCGGGGAAGCATCTGCTCCTTACTCTGAAGATAATCGGAATCGACGCTTTAATAAACATTCGGAAGGCTCTTCGTTTCGATTCGCAAATGAAGGGTCGAGTTCGCGGCAGAGGAGTGAGTCTTTGTCTCATAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTAGCAAAGAGAAGACTGAGCAGAGCTCTCCTCCTCGGTTTTCTGAATCAATGCAGGAGAAGCAATCGCAACCACAGCGTCCGCCAGAAGCTGATGAGATATTCAAGAAAATGAAGGAGACTGGTCTGATTCCCAACGCTGTCGCCATGCTTGATGGGCTGTGCAAAGATGGGCTTATCCAAGAAGCTATGAAACTCTTTGGATTGATTCGTGAGAAGGGTACAATCCCGGAAGTTGTGATTTACACCGCTGTTGTTGAAGGGTTTTGTAAGGCTGAGAAGCTTGATGAAGCAATTAGGATCTTCAGGAAAATGCAGAATAATGGCATTTCTCCTAATGCTTTCAGTTTTGGCGTCTTGATACAGGGACTGTGCAAATGCAAAAAATTAGAGGATGCTGTAGCATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAAATCTAATCACTTTTGTTGGCTTAATTGATGAGTTGTGCAAAGAAAGGGGAGTGGAGGAAGCTCAGAGTGTTTTAGAAACCTTGAAACAAAAGGGATTCTTGATTAATGAGAAAGCTTTAAGAGAATTTCTGAACAAAAGAGCTCCCTTTTCACCTAATATCTGGGAAGTAATCTTTGGAAAGAAAACGAAGGAATTTTTCTGAGATTGTTGTGGTAGTCATAAAAGGTTGTAAGTCTTCTTTTTTTTTTTTTCCCCTTTTTATGTAATTCCTTCTCTAATTTAAGATATTTTTCTTATAGTATATGGAGTAATTCGAGCAGATGACCGACATGTTATAATAGAAATTATCTTCAATCTTTTGATAGCGTCCAATAGCTTGTACGAATTTCTGAATACAAAAATGATAAGGTACGAAACAAGGAAAAAATTAGGAAAAGAAGGGAAAAAATGCTTGTGTGTTGCCTTAGTCTTATTAAAACTTATCTCATTGTTGTTAGTTTAATCAGAATTTATTGAAATTTCTATTTTAATTAGCGATCTAGGATGATTGTAATTTGTAAAAGTGGTTCATGTAACATATCAGGAACTTTCTGGGATTTAACTATTACTTATACTGACGTAGACAGTAGGCTTCAATCTCTTAATCTCCCCCTTCCCCCACCCTCGTTTTCTCTTTTTGTTATTTTCACTAAAAAAACAGATTGTCACCGAAACAAGTTTTTTATTTCCTCTGGTCCACCTCAAGCTTACTACCCAAGTTTATAAGTTTAAGAATTACTCAAAATAAAAGCCAGCCTTCAACATATAACCAAGGACAATAAGATAAGCACACACGTTAACAGGTTCTAAAATCACTCAGCACAAGCATACAAGAACTTAATATTAAAGTTTACATGGTTAAAATTCACAAGTTTAAAGTTGCATCTTATGGGAGAGGTTGTTCACTAGTGGATGAAGCTCGACTTGAGATTAGTTGCTCATTTCATTTTGGGAATTGATGAATGGAAGTTCGTACATAATATGATGTTCAGATGGTTTGATCATTATTATGATGGATCAAATAGGAGTTGTCATTTAAAAAGGTTGCATAATTTATAGTTTGTTAACTATGGCCAAAGATATGCAGCTCCCAAGTGTTGATGTATGATGAATCAAATAGGAGTTGTGCATAATTTATATTCTGTTTACTATGGCCAAGGATATGCTGTTCCCAAGTGTTAATGCTTATCTGTATGATTATGTAGGTGAAGATACCGATCATATCACTGAGAAGAAACCACAAGTTGAAATCATTGAAACTCGGCAGCCAGAATATAGTGATTGTGTTGAAGAACAAGAATCTGGTTGAAGTTGGAAGAGTGAACAACCCACAACTATTGAAGTGAGCTTTAAGAGTAGGTCAACTTAGGGGAACACAATATTTGTGCAGTCAAGTCCGTTAATCTTTGGTTAAAGATTATGTGGATCACTCGGCATTGAAGAGACTGGCTACGGTTAATGACCGACGGATATTTTTTGCAAGAATGAACACCAAAACAATGTGTTAAATTTACCATTTACGTCTTAGAGATTTGTAACAAACAATTATGCGAGCTATGAAATTTTATCCAAAAAAAAATTATGTGAGCTATGAATATTTCCTTGCTTCCTGCCATTAATGACAATACAGAGATGGTTTATCTTTTTATCAGGC

mRNA sequence

GAAAACTCTCCGCACTATCCCCTCGCTAAAACCCTACACCCATTTCACCCTTCATTGTCATCGATCAGTTTCCGACTGATAGCGATCTCTTCATCAATTTCCCCGCTCGAGATTCTCATGGGAGCCTTGCAGTTGCAATTTCAATCTCGCCTTCGTGTTTCGAAGATTTTGTCTTCGACAATTTGGAAATGGGACAGAGATTCTCCTCTGCTTCACGATCCATTGCGATCGCCGGATTTCTCACTCTCGCCGGTGCAATCTCGCTGTTTTAGCTCCAATCCCATGGATGACGATTGGGCCTTCTCAAACTCTGAGCCGAGAAGCAGTCCGCCGCATCGTCGTTCTCCTCCGGATCCTCGCGAAGCTCGTCGAGTTCCCAAATTCACCGGGGAAGCATCTGCTCCTTACTCTGAAGATAATCGGAATCGACGCTTTAATAAACATTCGGAAGGCTCTTCGTTTCGATTCGCAAATGAAGGGTCGAGTTCGCGGCAGAGGAGTGAGTCTTTGTCTCATAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTAGCAAAGAGAAGACTGAGCAGAGCTCTCCTCCTCGGTTTTCTGAATCAATGCAGGAGAAGCAATCGCAACCACAGCGTCCGCCAGAAGCTGATGAGATATTCAAGAAAATGAAGGAGACTGGTCTGATTCCCAACGCTGTCGCCATGCTTGATGGGCTGTGCAAAGATGGGCTTATCCAAGAAGCTATGAAACTCTTTGGATTGATTCGTGAGAAGGGTACAATCCCGGAAGTTGTGATTTACACCGCTGTTGTTGAAGGGTTTTGTAAGGCTGAGAAGCTTGATGAAGCAATTAGGATCTTCAGGAAAATGCAGAATAATGGCATTTCTCCTAATGCTTTCAGTTTTGGCGTCTTGATACAGGGACTGTGCAAATGCAAAAAATTAGAGGATGCTGTAGCATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAAATCTAATCACTTTTGTTGGCTTAATTGATGAGTTGTGCAAAGAAAGGGGAGTGGAGGAAGCTCAGAGTGTTTTAGAAACCTTGAAACAAAAGGGATTCTTGATTAATGAGAAAGCTTTAAGAGAATTTCTGAACAAAAGAGCTCCCTTTTCACCTAATATCTGGGAAGTAATCTTTGGAAAGAAAACGAAGGAATTTTTCTGAGATTGTTGTGGTAGTCATAAAAGGTGAAGATACCGATCATATCACTGAGAAGAAACCACAAGTTGAAATCATTGAAACTCGGCAGCCAGAATATAGTGATTGTGTTGAAGAACAAGAATCTGGTTGAAGTTGGAAGAGTGAACAACCCACAACTATTGAAGTGAGCTTTAAGAGTAGGTCAACTTAGGGGAACACAATATTTGTGCAGTCAAGTCCGTTAATCTTTGGTTAAAGATTATGTGGATCACTCGGCATTGAAGAGACTGGCTACGGTTAATGACCGACGGATATTTTTTGCAAGAATGAACACCAAAACAATGTGTTAAATTTACCATTTACGTCTTAGAGATTTGTAACAAACAATTATGCGAGCTATGAAATTTTATCCAAAAAAAAATTATGTGAGCTATGAATATTTCCTTGCTTCCTGCCATTAATGACAATACAGAGATGGTTTATCTTTTTATCAGGC

Coding sequence (CDS)

ATGGGAGCCTTGCAGTTGCAATTTCAATCTCGCCTTCGTGTTTCGAAGATTTTGTCTTCGACAATTTGGAAATGGGACAGAGATTCTCCTCTGCTTCACGATCCATTGCGATCGCCGGATTTCTCACTCTCGCCGGTGCAATCTCGCTGTTTTAGCTCCAATCCCATGGATGACGATTGGGCCTTCTCAAACTCTGAGCCGAGAAGCAGTCCGCCGCATCGTCGTTCTCCTCCGGATCCTCGCGAAGCTCGTCGAGTTCCCAAATTCACCGGGGAAGCATCTGCTCCTTACTCTGAAGATAATCGGAATCGACGCTTTAATAAACATTCGGAAGGCTCTTCGTTTCGATTCGCAAATGAAGGGTCGAGTTCGCGGCAGAGGAGTGAGTCTTTGTCTCATAAGGATTTTAGCTTTCTTGAAAAATTCAAGCTGAATACTGATAATCAGAGTAGTAGCAAAGAGAAGACTGAGCAGAGCTCTCCTCCTCGGTTTTCTGAATCAATGCAGGAGAAGCAATCGCAACCACAGCGTCCGCCAGAAGCTGATGAGATATTCAAGAAAATGAAGGAGACTGGTCTGATTCCCAACGCTGTCGCCATGCTTGATGGGCTGTGCAAAGATGGGCTTATCCAAGAAGCTATGAAACTCTTTGGATTGATTCGTGAGAAGGGTACAATCCCGGAAGTTGTGATTTACACCGCTGTTGTTGAAGGGTTTTGTAAGGCTGAGAAGCTTGATGAAGCAATTAGGATCTTCAGGAAAATGCAGAATAATGGCATTTCTCCTAATGCTTTCAGTTTTGGCGTCTTGATACAGGGACTGTGCAAATGCAAAAAATTAGAGGATGCTGTAGCATTTTGCATTGAGATGTTAGAATCTGGGCATTCTCCAAATCTAATCACTTTTGTTGGCTTAATTGATGAGTTGTGCAAAGAAAGGGGAGTGGAGGAAGCTCAGAGTGTTTTAGAAACCTTGAAACAAAAGGGATTCTTGATTAATGAGAAAGCTTTAAGAGAATTTCTGAACAAAAGAGCTCCCTTTTCACCTAATATCTGGGAAGTAATCTTTGGAAAGAAAACGAAGGAATTTTTCTGA

Protein sequence

MGALQLQFQSRLRVSKILSSTIWKWDRDSPLLHDPLRSPDFSLSPVQSRCFSSNPMDDDWAFSNSEPRSSPPHRRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANEGSSSRQRSESLSHKDFSFLEKFKLNTDNQSSSKEKTEQSSPPRFSESMQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLITFVGLIDELCKERGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKTKEFF

Homology

[Close]

BLAST of Lcy08g003660 vs. ExPASy Swiss-Prot
Match: Q9SZL5 (Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX=3702 GN=At4g38150 PE=2 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 8.9e-76
Identity = 163/290 (56.21%), Postives = 196/290 (67.59%), Query Frame = 0


Query: 74  RRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANEGSSSRQRSESLSH 133
           +++PP+P   R      GE S+           N H E  + +  N G S    S     
Sbjct: 42  QQNPPEPLPNR---PLRGERSS-----------NSHREPPARQAHNLGKSDTTLS----- 101

Query: 134 KDFSFLEKFKLNTDNQSSSKEKTEQSSPPRFSESMQEKQSQPQRPPE-ADEIFKKMKETG 193
            D  FLE+FKL  +  S    K EQ               +P  PPE +DEIFKKMKE G
Sbjct: 102 -DDGFLEQFKLGVNQDSRETPKPEQ------------YPQEPLPPPEDSDEIFKKMKEGG 161

Query: 194 LIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFCKAEKLDEAIRIF 253
           LIPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVVE FCKA K+++A RIF
Sbjct: 162 LIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIF 221

Query: 254 RKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLITFVGLIDELCKE 313
           RKMQNNGI+PNAFS+GVL+QGL  C  L+DAVAFC EMLESGHSPN+ TFV L+D LC+ 
Sbjct: 222 RKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRV 281

Query: 314 RGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKTKE 363
           +GVE+AQS ++TL QKGF +N KA++EF++KRAPF    WE IF KK  E
Sbjct: 282 KGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTE 299

[Close]

BLAST of Lcy08g003660 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.9e-24
Identity = 56/157 (35.67%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 180 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 239
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 240 EGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHS 299
            GFC+   + EA ++F +M   G+ P++ +F  LI G CK   ++DA      M+++G S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 300 PNLITFVGLIDELCKERGVEEAQSVLETLKQKGFLIN 334
           PN++T+  LID LCKE  ++ A  +L  + + G   N
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490

[Close]

BLAST of Lcy08g003660 vs. ExPASy Swiss-Prot
Match: Q9FNL2 (Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX=3702 GN=At5g46100 PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 3.0e-23
Identity = 55/150 (36.67%), Postives = 90/150 (60.00%), Query Frame = 0


Query: 183 EIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGF 242
           +IF +M + G  P++     ++ GLC+ G I EA KLF  + EK   P VV YT+++ G 
Sbjct: 178 KIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGL 237

Query: 243 CKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNL 302
           C ++ +DEA+R   +M++ GI PN F++  L+ GLCK  +   A+     M+  G  PN+
Sbjct: 238 CGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNM 297

Query: 303 ITFVGLIDELCKERGVEEAQSVLETLKQKG 330
           +T+  LI  LCKE+ ++EA  +L+ +  +G
Sbjct: 298 VTYTTLITGLCKEQKIQEAVELLDRMNLQG 327

[Close]

BLAST of Lcy08g003660 vs. ExPASy Swiss-Prot
Match: Q6NQ83 (Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At3g22470 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 46/151 (30.46%), Postives = 92/151 (60.93%), Query Frame = 0


Query: 180 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 239
           EA E++ +M   G+ P+ +   +++DG CK+  + EA ++F L+  KG  P++V Y+ ++
Sbjct: 333 EAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILI 392

Query: 240 EGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHS 299
             +CKA+++D+ +R+FR++ + G+ PN  ++  L+ G C+  KL  A     EM+  G  
Sbjct: 393 NSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVP 452

Query: 300 PNLITFVGLIDELCKERGVEEAQSVLETLKQ 328
           P+++T+  L+D LC    + +A  + E +++
Sbjct: 453 PSVVTYGILLDGLCDNGELNKALEIFEKMQK 483

[Close]

BLAST of Lcy08g003660 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 57/152 (37.50%), Postives = 86/152 (56.58%), Query Frame = 0


Query: 181 ADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVE 240
           A E+ +KM+E  +  +AV    ++DGLCKDG +  A  LF  +  KG   +++ Y  ++ 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 241 GFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSP 300
           GFC A + D+  ++ R M    ISPN  +F VLI    K  KL +A     EM++ G +P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 301 NLITFVGLIDELCKERGVEEAQSVLETLKQKG 330
           N IT+  LID  CKE  +EEA  +++ +  KG
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398

[Close]

BLAST of Lcy08g003660 vs. ExPASy TrEMBL
Match: A0A6J1I1Q2 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima OX=3661 GN=LOC111468227 PE=4 SV=1)

HSP 1 Score: 610.1 bits (1572), Expect = 5.8e-171
Identity = 313/364 (85.99%), Postives = 333/364 (91.48%), Query Frame = 0


Query: 1   MGALQLQFQSRLRVSKILSSTIWKWDRDSPLLHDPLRSPDFSLSPVQSRCFSSNPMDDDW 60
           MGALQ+Q QSRLRVSKIL STI  W+R  PLLHDPLR+PD SLSPV+SRCFSSN MDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSNSEPRSSPPHRRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANE 120
            FS SEPRSSPP RRSPPDPREARRVPKF GE SAPY EDNRN+RFN+H EGS  RFANE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 GSSSRQRSESLSHKDFSFLEKFKLNTDNQSSSKEKTEQSSPPRFSESMQEKQSQPQRPPE 180
           G  SR+RSESLS KDFSFLEKFKLNTDN S+S EKTE SS  +FSESMQ KQSQPQ PPE
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVV+GFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLI 300
           KAE LDEAIRIFRKMQNNGISPNAFS+GVLIQGL KCKKLEDAV+FCIEMLESGHSPNL 
Sbjct: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKERGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKT 360
           TFVGLIDELCKE+GV+EA +V+ETLKQKGFLINEKALREFLNKRAPFSP+IWE+IFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Lcy08g003660 vs. ExPASy TrEMBL
Match: A0A6J1C2J3 (pentatricopeptide repeat-containing protein At4g38150 OS=Momordica charantia OX=3673 GN=LOC111007869 PE=4 SV=1)

HSP 1 Score: 605.9 bits (1561), Expect = 1.1e-169
Identity = 312/364 (85.71%), Postives = 329/364 (90.38%), Query Frame = 0


Query: 1   MGALQLQFQSRLRVSKILSSTIWKWDRDSPLLHDPLRSPDFSLSPVQSRCFSSNPMDDDW 60
           M ALQLQ QSRLR+SKI+SS+IWK +R  PLLHD LR+ DFSL P QSRCFSSN MDDDW
Sbjct: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60

Query: 61  AFSNSEPRSSPPHRRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANE 120
           A SNSEPRS+PPHRRSPPD RE RRVPKF+   SA Y  D+RNRR NK SEGSSFRF NE
Sbjct: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120

Query: 121 GSSSRQRSESLSHKDFSFLEKFKLNTDNQSSSKEKTEQSSPPRFSESMQEKQSQPQRPPE 180
           G  SRQRSE LS KDFSFLEKFKLNTDNQSSSKEKTEQSS PRFSES+QEKQSQPQRPPE
Sbjct: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFC 240
           ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV+GFC
Sbjct: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLI 300
           KAEKLDEAIRIFRKMQ NGISPNAFSFGVLIQGL KC KLE+A+ FCIEMLESGHSPN+ 
Sbjct: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300

Query: 301 TFVGLIDELCKERGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKT 360
           T VGL+DELCKERG EEA+SV+ETLKQKGFL+NEKALREFLNKRAPFSPNIWE IFGKKT
Sbjct: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Lcy08g003660 vs. ExPASy TrEMBL
Match: A0A6J1GKZ0 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata OX=3662 GN=LOC111455321 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 3.2e-169
Identity = 309/364 (84.89%), Postives = 333/364 (91.48%), Query Frame = 0


Query: 1   MGALQLQFQSRLRVSKILSSTIWKWDRDSPLLHDPLRSPDFSLSPVQSRCFSSNPMDDDW 60
           MGALQ+Q QSRLRVSKILSSTI  W+R  PLLHDPLR+PD SLSPV+SRCFSSN MDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSNSEPRSSPPHRRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANE 120
            FS SEPRSSPP RRSPPDPREARRVPKF GE SAPY EDNRN+RFN+HSEGSS RFAN+
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFAND 120

Query: 121 GSSSRQRSESLSHKDFSFLEKFKLNTDNQSSSKEKTEQSSPPRFSESMQEKQSQPQRPPE 180
           G  SR R+ESLS KDFSFLEKFKLNTDNQS+S EK E SS  + SESMQ KQSQPQ PPE
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVV+GFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLI 300
           KAEKLDEAIRIFRKMQNNGISPNAFS+G+LIQGL K K+LEDAV+FCIEMLESGHSPNL 
Sbjct: 241 KAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKERGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKT 360
           TFVGLIDELCKE+GV+EA +V+ETLKQKGFLINEK LR+FLNKRAPFSP+IWE+IFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Lcy08g003660 vs. ExPASy TrEMBL
Match: A0A1S3CFW0 (pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN=LOC103500481 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 7.7e-147
Identity = 286/360 (79.44%), Postives = 309/360 (85.83%), Query Frame = 0


Query: 7   QFQSRLRVSKILSSTIWKWDRDSPLLHDPLRSPDFSLSPVQSRCFSSNPMDDDWAFSNSE 66
           QFQSRL+VSKILSS+I KW+ D PLLH+PLR+PDFSLSP  SR FSSN MDDD AFS SE
Sbjct: 5   QFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSESE 64

Query: 67  PRSSPPHRRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANEGSSSRQ 126
           PR++PP RR PPD REARRVP+         S DNRN+RFN+HSEGSS RF NEGS+SRQ
Sbjct: 65  PRNTPPQRRFPPDHREARRVPR----GGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 124

Query: 127 RSESLSHKDFSFLEKFKLNTDNQSSSKEKTEQ-SSPPRFSESMQEK-QSQPQRPPEADEI 186
           RSESLS KDFSFLEKFKLNTDNQSS  EKTE+ SS    SESMQEK QSQ QRPP ADEI
Sbjct: 125 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEI 184

Query: 187 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFCKAEK 246
           F+KMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVV+GFCKAEK
Sbjct: 185 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEK 244

Query: 247 LDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLITFVG 306
            DEAIRIFRKMQN GISPNAFSFGVLIQGL KCKKL+DAVAFC EMLESGH PNL TFVG
Sbjct: 245 FDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 304

Query: 307 LIDELCKERGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKTKEFF 365
           LID LC E+GV+EA +V+ET KQKGFLI+EKALREFLNKRAPFSP+IW+V FG K   FF
Sbjct: 305 LIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 360

[Close]

BLAST of Lcy08g003660 vs. ExPASy TrEMBL
Match: A0A5D3D5J5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00030 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 7.7e-147
Identity = 286/360 (79.44%), Postives = 309/360 (85.83%), Query Frame = 0


Query: 7   QFQSRLRVSKILSSTIWKWDRDSPLLHDPLRSPDFSLSPVQSRCFSSNPMDDDWAFSNSE 66
           QFQSRL+VSKILSS+I KW+ D PLLH+PLR+PDFSLSP  SR FSSN MDDD AFS SE
Sbjct: 5   QFQSRLQVSKILSSSIRKWEIDFPLLHNPLRTPDFSLSPAPSRRFSSNSMDDDRAFSESE 64

Query: 67  PRSSPPHRRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANEGSSSRQ 126
           PR++PP RR PPD REARRVP+         S DNRN+RFN+HSEGSS RF NEGS+SRQ
Sbjct: 65  PRNTPPQRRFPPDHREARRVPR----GGVTDSYDNRNQRFNRHSEGSSSRFTNEGSTSRQ 124

Query: 127 RSESLSHKDFSFLEKFKLNTDNQSSSKEKTEQ-SSPPRFSESMQEK-QSQPQRPPEADEI 186
           RSESLS KDFSFLEKFKLNTDNQSS  EKTE+ SS    SESMQEK QSQ QRPP ADEI
Sbjct: 125 RSESLSQKDFSFLEKFKLNTDNQSSGNEKTEENSSSAPVSESMQEKQQSQHQRPPAADEI 184

Query: 187 FKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFCKAEK 246
           F+KMKE+GLIPNAVAMLDGLCKDGLIQEAMKLF LIREKGTIPEVVIYTAVV+GFCKAEK
Sbjct: 185 FRKMKESGLIPNAVAMLDGLCKDGLIQEAMKLFALIREKGTIPEVVIYTAVVDGFCKAEK 244

Query: 247 LDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLITFVG 306
            DEAIRIFRKMQN GISPNAFSFGVLIQGL KCKKL+DAVAFC EMLESGH PNL TFVG
Sbjct: 245 FDEAIRIFRKMQNKGISPNAFSFGVLIQGLYKCKKLDDAVAFCNEMLESGHLPNLTTFVG 304

Query: 307 LIDELCKERGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKTKEFF 365
           LID LC E+GV+EA +V+ET KQKGFLI+EKALREFLNKRAPFSP+IW+V FG K   FF
Sbjct: 305 LIDVLCSEKGVDEAHNVVETFKQKGFLIDEKALREFLNKRAPFSPDIWKVFFGNKKAPFF 360

[Close]

BLAST of Lcy08g003660 vs. NCBI nr
Match: XP_022969144.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >XP_022969146.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima])

HSP 1 Score: 610.1 bits (1572), Expect = 1.2e-170
Identity = 313/364 (85.99%), Postives = 333/364 (91.48%), Query Frame = 0


Query: 1   MGALQLQFQSRLRVSKILSSTIWKWDRDSPLLHDPLRSPDFSLSPVQSRCFSSNPMDDDW 60
           MGALQ+Q QSRLRVSKIL STI  W+R  PLLHDPLR+PD SLSPV+SRCFSSN MDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILFSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSNSEPRSSPPHRRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANE 120
            FS SEPRSSPP RRSPPDPREARRVPKF GE SAPY EDNRN+RFN+H EGS  RFANE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHWEGSESRFANE 120

Query: 121 GSSSRQRSESLSHKDFSFLEKFKLNTDNQSSSKEKTEQSSPPRFSESMQEKQSQPQRPPE 180
           G  SR+RSESLS KDFSFLEKFKLNTDN S+S EKTE SS  +FSESMQ KQSQPQ PPE
Sbjct: 121 GPMSRRRSESLSQKDFSFLEKFKLNTDNLSTSTEKTEPSSSAQFSESMQGKQSQPQCPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVV+GFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLI 300
           KAE LDEAIRIFRKMQNNGISPNAFS+GVLIQGL KCKKLEDAV+FCIEMLESGHSPNL 
Sbjct: 241 KAENLDEAIRIFRKMQNNGISPNAFSYGVLIQGLYKCKKLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKERGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKT 360
           TFVGLIDELCKE+GV+EA +V+ETLKQKGFLINEKALREFLNKRAPFSP+IWE+IFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Lcy08g003660 vs. NCBI nr
Match: XP_023554525.1 (pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023554526.1 pentatricopeptide repeat-containing protein At4g38150-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 608.2 bits (1567), Expect = 4.6e-170
Identity = 311/364 (85.44%), Postives = 335/364 (92.03%), Query Frame = 0


Query: 1   MGALQLQFQSRLRVSKILSSTIWKWDRDSPLLHDPLRSPDFSLSPVQSRCFSSNPMDDDW 60
           MGALQ+Q QSRLRVSKILSSTI  W+R  PLLHDPLR+PD SLSPV+SRCFSSN MDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSNSEPRSSPPHRRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANE 120
            FS SEPRSSPP RRSPPDPREARRVPKF GE SAPY EDNRN+RFN+HSEGSS RFANE
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEGSAPYPEDNRNQRFNRHSEGSSSRFANE 120

Query: 121 GSSSRQRSESLSHKDFSFLEKFKLNTDNQSSSKEKTEQSSPPRFSESMQEKQSQPQRPPE 180
           G  SR+R+ESLS KDFSFLEKFKLNTDNQS+S EK E SS  +FSESMQ +QSQPQ PPE
Sbjct: 121 GPMSRRRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGEQSQPQCPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVV+GFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLI 300
           KAEKLDEAIRIFRKMQNNGISPNAFS+G+LIQGL K K+LEDAV+FCIEMLESGHSPNL 
Sbjct: 241 KAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKERGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKT 360
           TFVGLIDELCKE+G +EA +V+ETLKQKGFLINEKALREFLNKRAPFSP+IWE+IFGKKT
Sbjct: 301 TFVGLIDELCKEKGEDEAHTVIETLKQKGFLINEKALREFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Lcy08g003660 vs. NCBI nr
Match: XP_022136091.1 (pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia] >XP_022136092.1 pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia])

HSP 1 Score: 605.9 bits (1561), Expect = 2.3e-169
Identity = 312/364 (85.71%), Postives = 329/364 (90.38%), Query Frame = 0


Query: 1   MGALQLQFQSRLRVSKILSSTIWKWDRDSPLLHDPLRSPDFSLSPVQSRCFSSNPMDDDW 60
           M ALQLQ QSRLR+SKI+SS+IWK +R  PLLHD LR+ DFSL P QSRCFSSN MDDDW
Sbjct: 1   MAALQLQLQSRLRMSKIVSSSIWKCERQLPLLHDSLRTQDFSLLPTQSRCFSSNSMDDDW 60

Query: 61  AFSNSEPRSSPPHRRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANE 120
           A SNSEPRS+PPHRRSPPD RE RRVPKF+   SA Y  D+RNRR NK SEGSSFRF NE
Sbjct: 61  AISNSEPRSNPPHRRSPPDSREPRRVPKFSDGVSASYPGDDRNRRINKRSEGSSFRFDNE 120

Query: 121 GSSSRQRSESLSHKDFSFLEKFKLNTDNQSSSKEKTEQSSPPRFSESMQEKQSQPQRPPE 180
           G  SRQRSE LS KDFSFLEKFKLNTDNQSSSKEKTEQSS PRFSES+QEKQSQPQRPPE
Sbjct: 121 GGISRQRSEFLSQKDFSFLEKFKLNTDNQSSSKEKTEQSSAPRFSESVQEKQSQPQRPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFC 240
           ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV+GFC
Sbjct: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLI 300
           KAEKLDEAIRIFRKMQ NGISPNAFSFGVLIQGL KC KLE+A+ FCIEMLESGHSPN+ 
Sbjct: 241 KAEKLDEAIRIFRKMQKNGISPNAFSFGVLIQGLYKCNKLEEAIGFCIEMLESGHSPNVT 300

Query: 301 TFVGLIDELCKERGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKT 360
           T VGL+DELCKERG EEA+SV+ETLKQKGFL+NEKALREFLNKRAPFSPNIWE IFGKKT
Sbjct: 301 TLVGLVDELCKERGTEEARSVIETLKQKGFLLNEKALREFLNKRAPFSPNIWEAIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Lcy08g003660 vs. NCBI nr
Match: KAG7011839.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 605.9 bits (1561), Expect = 2.3e-169
Identity = 310/364 (85.16%), Postives = 332/364 (91.21%), Query Frame = 0


Query: 1   MGALQLQFQSRLRVSKILSSTIWKWDRDSPLLHDPLRSPDFSLSPVQSRCFSSNPMDDDW 60
           MGALQ+Q QSRLRVSKILSSTI  W+R  PLLHDPLR+PD SLSPV+SRCFSSN MDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSNSEPRSSPPHRRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANE 120
            FS SEPRSSPP RRSPPDPREARRVPKF GE SAPY EDNRN+RFN+HSEGSS RFANE
Sbjct: 61  NFSKSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFANE 120

Query: 121 GSSSRQRSESLSHKDFSFLEKFKLNTDNQSSSKEKTEQSSPPRFSESMQEKQSQPQRPPE 180
           G  SR R+ESLS KDFSFLEKFKLNTDNQS+S EK E SS  +FSESMQ KQSQPQ PPE
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQFSESMQGKQSQPQCPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVV+GFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLI 300
           KAEK DEAIRIFRKMQNNGISPNAFS+G+LIQGL K K+LEDAV+FC EMLESGHSPNL 
Sbjct: 241 KAEKFDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCFEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKERGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKT 360
           TFVGLIDELCKE+GV+EA +V+ETLKQKGFLINEK LREFLNKRAPFSP+IWE+IFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLREFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Lcy08g003660 vs. NCBI nr
Match: XP_022952706.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] >XP_022952707.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata])

HSP 1 Score: 604.4 bits (1557), Expect = 6.6e-169
Identity = 309/364 (84.89%), Postives = 333/364 (91.48%), Query Frame = 0


Query: 1   MGALQLQFQSRLRVSKILSSTIWKWDRDSPLLHDPLRSPDFSLSPVQSRCFSSNPMDDDW 60
           MGALQ+Q QSRLRVSKILSSTI  W+R  PLLHDPLR+PD SLSPV+SRCFSSN MDDDW
Sbjct: 1   MGALQMQLQSRLRVSKILSSTIRNWERGFPLLHDPLRTPDLSLSPVESRCFSSNSMDDDW 60

Query: 61  AFSNSEPRSSPPHRRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANE 120
            FS SEPRSSPP RRSPPDPREARRVPKF GE SAPY EDNRN+RFN+HSEGSS RFAN+
Sbjct: 61  NFSRSEPRSSPPQRRSPPDPREARRVPKFAGEVSAPYPEDNRNQRFNRHSEGSSSRFAND 120

Query: 121 GSSSRQRSESLSHKDFSFLEKFKLNTDNQSSSKEKTEQSSPPRFSESMQEKQSQPQRPPE 180
           G  SR R+ESLS KDFSFLEKFKLNTDNQS+S EK E SS  + SESMQ KQSQPQ PPE
Sbjct: 121 GPMSRPRNESLSQKDFSFLEKFKLNTDNQSTSTEKIEPSSSAQISESMQGKQSQPQCPPE 180

Query: 181 ADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFC 240
           ADEIF+KMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVV+YTAVV+GFC
Sbjct: 181 ADEIFRKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVVYTAVVDGFC 240

Query: 241 KAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLI 300
           KAEKLDEAIRIFRKMQNNGISPNAFS+G+LIQGL K K+LEDAV+FCIEMLESGHSPNL 
Sbjct: 241 KAEKLDEAIRIFRKMQNNGISPNAFSYGILIQGLYKSKQLEDAVSFCIEMLESGHSPNLT 300

Query: 301 TFVGLIDELCKERGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKT 360
           TFVGLIDELCKE+GV+EA +V+ETLKQKGFLINEK LR+FLNKRAPFSP+IWE+IFGKKT
Sbjct: 301 TFVGLIDELCKEKGVDEAHTVIETLKQKGFLINEKDLRDFLNKRAPFSPHIWELIFGKKT 360

Query: 361 KEFF 365
           KEFF
Sbjct: 361 KEFF 364

[Close]

BLAST of Lcy08g003660 vs. TAIR 10
Match: AT4G38150.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 285.4 bits (729), Expect = 6.3e-77
Identity = 163/290 (56.21%), Postives = 196/290 (67.59%), Query Frame = 0


Query: 74  RRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANEGSSSRQRSESLSH 133
           +++PP+P   R      GE S+           N H E  + +  N G S    S     
Sbjct: 42  QQNPPEPLPNR---PLRGERSS-----------NSHREPPARQAHNLGKSDTTLS----- 101

Query: 134 KDFSFLEKFKLNTDNQSSSKEKTEQSSPPRFSESMQEKQSQPQRPPE-ADEIFKKMKETG 193
            D  FLE+FKL  +  S    K EQ               +P  PPE +DEIFKKMKE G
Sbjct: 102 -DDGFLEQFKLGVNQDSRETPKPEQ------------YPQEPLPPPEDSDEIFKKMKEGG 161

Query: 194 LIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFCKAEKLDEAIRIF 253
           LIPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVVE FCKA K+++A RIF
Sbjct: 162 LIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIF 221

Query: 254 RKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLITFVGLIDELCKE 313
           RKMQNNGI+PNAFS+GVL+QGL  C  L+DAVAFC EMLESGHSPN+ TFV L+D LC+ 
Sbjct: 222 RKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRV 281

Query: 314 RGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKTKE 363
           +GVE+AQS ++TL QKGF +N KA++EF++KRAPF    WE IF KK  E
Sbjct: 282 KGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTE 299

[Close]

BLAST of Lcy08g003660 vs. TAIR 10
Match: AT4G38150.2 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 285.4 bits (729), Expect = 6.3e-77
Identity = 163/290 (56.21%), Postives = 196/290 (67.59%), Query Frame = 0


Query: 74  RRSPPDPREARRVPKFTGEASAPYSEDNRNRRFNKHSEGSSFRFANEGSSSRQRSESLSH 133
           +++PP+P   R      GE S+           N H E  + +  N G S    S     
Sbjct: 42  QQNPPEPLPNR---PLRGERSS-----------NSHREPPARQAHNLGKSDTTLS----- 101

Query: 134 KDFSFLEKFKLNTDNQSSSKEKTEQSSPPRFSESMQEKQSQPQRPPE-ADEIFKKMKETG 193
            D  FLE+FKL  +  S    K EQ               +P  PPE +DEIFKKMKE G
Sbjct: 102 -DDGFLEQFKLGVNQDSRETPKPEQ------------YPQEPLPPPEDSDEIFKKMKEGG 161

Query: 194 LIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVVEGFCKAEKLDEAIRIF 253
           LIPNAVAMLDGLCKDGL+QEAMKLFGL+R+KGTIPEVVIYTAVVE FCKA K+++A RIF
Sbjct: 162 LIPNAVAMLDGLCKDGLVQEAMKLFGLMRDKGTIPEVVIYTAVVEAFCKAHKIEDAKRIF 221

Query: 254 RKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHSPNLITFVGLIDELCKE 313
           RKMQNNGI+PNAFS+GVL+QGL  C  L+DAVAFC EMLESGHSPN+ TFV L+D LC+ 
Sbjct: 222 RKMQNNGIAPNAFSYGVLVQGLYNCNMLDDAVAFCSEMLESGHSPNVPTFVELVDALCRV 281

Query: 314 RGVEEAQSVLETLKQKGFLINEKALREFLNKRAPFSPNIWEVIFGKKTKE 363
           +GVE+AQS ++TL QKGF +N KA++EF++KRAPF    WE IF KK  E
Sbjct: 282 KGVEQAQSAIDTLNQKGFAVNVKAVKEFMDKRAPFPSLAWEAIFKKKPTE 299

[Close]

BLAST of Lcy08g003660 vs. TAIR 10
Match: AT5G03560.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-28
Identity = 99/313 (31.63%), Postives = 157/313 (50.16%), Query Frame = 0


Query: 63  SNSEPRSSPPHRRSPPDPREARRVPKFTGEASAPYSE----DNRNRR---FNKHSEGSSF 122
           S+S   SSP    +    +E +   +F+    A +      + R RR    +K +  S F
Sbjct: 53  SSSSWWSSPDDLTASSKRKEKKTTERFSAVIDAVHDRKLPPELRGRRDFVRSKRNSNSLF 112

Query: 123 RFANEGSSSRQRSESLSHKDFSFLEKFKLNTDNQSSSKE--------KTEQSSPPRFSES 182
            +   G  +RQ S     K  +    F L+ D+     E        K E   PP    S
Sbjct: 113 PWFCGGVFARQFSSET--KRVNTKVNFSLSDDDSDEETETQVTEDSKKQEPPPPPYDPFS 172

Query: 183 MQEKQSQPQRPPEADEIFKKMKETGLIPNAVAMLDGLCKDGLIQEAMKLFGLIREKGTIP 242
            +    +P+ P    EIF KM+  G    AV M D L KDG   EA++LF  I++K  +P
Sbjct: 173 KKPAIEEPEDPKNLQEIFHKMRTEGFTNEAVKMFDALSKDGRTHEALELFSQIKDKNRMP 232

Query: 243 EVVIYTAVVEGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKL-EDAVAF 302
           +VV +TA+VE +  A +  E +++F +M  +G+SPNA+++ VLI+GL    K  +DA  +
Sbjct: 233 DVVAHTAIVEAYANAGQAKETLKVFMRMLASGVSPNAYTYSVLIKGLAADGKTHKDAKKY 292

Query: 303 CIEMLESGHSPNLITFVGLIDELCKERGVEEAQSVLETLKQKGFLINEKALREFLN-KRA 359
            +EM+ +G SPN  T+  + +   +E   E A+ +L+ +K KGF+ +EKA+RE L  KR 
Sbjct: 293 LLEMMGNGMSPNAATYTAVFEAFVREGKEESARELLQEMKGKGFVPDEKAVREALEYKRG 352

[Close]

BLAST of Lcy08g003660 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 5.6e-25
Identity = 56/157 (35.67%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 180 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 239
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 240 EGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHS 299
            GFC+   + EA ++F +M   G+ P++ +F  LI G CK   ++DA      M+++G S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 300 PNLITFVGLIDELCKERGVEEAQSVLETLKQKGFLIN 334
           PN++T+  LID LCKE  ++ A  +L  + + G   N
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490

[Close]

BLAST of Lcy08g003660 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 5.6e-25
Identity = 56/157 (35.67%), Postives = 92/157 (58.60%), Query Frame = 0


Query: 180 EADEIFKKMKETGLIPNAV---AMLDGLCKDGLIQEAMKLFGLIREKGTIPEVVIYTAVV 239
           EA+E F +M   G++P+ V    ++DG CK G I+ A K F  +  +   P+V+ YTA++
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393

Query: 240 EGFCKAEKLDEAIRIFRKMQNNGISPNAFSFGVLIQGLCKCKKLEDAVAFCIEMLESGHS 299
            GFC+   + EA ++F +M   G+ P++ +F  LI G CK   ++DA      M+++G S
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCS 453

Query: 300 PNLITFVGLIDELCKERGVEEAQSVLETLKQKGFLIN 334
           PN++T+  LID LCKE  ++ A  +L  + + G   N
Sbjct: 454 PNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPN 490

The following BLAST results are available for this feature:

BLAST of Lcy08g003660 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZL5	8.9e-76	56.21	Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	7.9e-24	35.67	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9FNL2	3.0e-23	36.67	Pentatricopeptide repeat-containing protein At5g46100 OS=Arabidopsis thaliana OX...	[more]
Q6NQ83	1.1e-22	30.46	Pentatricopeptide repeat-containing protein At3g22470, mitochondrial OS=Arabidop...	[more]
Q9LPX2	1.1e-22	37.50	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]

BLAST of Lcy08g003660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I1Q2	5.8e-171	85.99	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima O...	[more]
A0A6J1C2J3	1.1e-169	85.71	pentatricopeptide repeat-containing protein At4g38150 OS=Momordica charantia OX=...	[more]
A0A6J1GKZ0	3.2e-169	84.89	pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata...	[more]
A0A1S3CFW0	7.7e-147	79.44	pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN...	[more]
A0A5D3D5J5	7.7e-147	79.44	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]

BLAST of Lcy08g003660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022969144.1	1.2e-170	85.99	pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >X...	[more]
XP_023554525.1	4.6e-170	85.44	pentatricopeptide repeat-containing protein At4g38150-like isoform X1 [Cucurbita...	[more]
XP_022136091.1	2.3e-169	85.71	pentatricopeptide repeat-containing protein At4g38150 [Momordica charantia] >XP_...	[more]
KAG7011839.1	2.3e-169	85.16	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022952706.1	6.6e-169	84.89	pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] ...	[more]

BLAST of Lcy08g003660 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38150.1	6.3e-77	56.21	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G38150.2	6.3e-77	56.21	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G03560.2	1.9e-28	31.63	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G05670.1	5.6e-25	35.67	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	5.6e-25	35.67	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 199..227 e-value: 7.8E-5 score: 20.6 coord: 230..264 e-value: 6.3E-10 score: 36.6 coord: 266..298 e-value: 2.8E-6 score: 25.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 301..330 e-value: 0.12 score: 12.6 coord: 199..224 e-value: 5.8E-5 score: 23.1
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 227..276 e-value: 1.5E-16 score: 60.3
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 263..297 score: 11.257313
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 298..332 score: 9.010246
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 228..262 score: 12.945353
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 193..227 score: 8.582755
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 144..287 e-value: 1.9E-30 score: 108.4
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 288..338 e-value: 2.1E-5 score: 26.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..126
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..175
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..141
None	No IPR available	PANTHER	PTHR45613:SF39	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 61..362
None	No IPR available	PANTHER	PTHR45613	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 61..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy08g003660.1	Lcy08g003660.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding