Lcy07g016430 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGCCTCTTCGATTGAAGAAACCCTTGTAATCGAAGCCCCAAACGCTTCCGACGATCATCTCCAAGCATCGGCGGACGCCCAAGACAATACCGATAACCTCCCACAAACTACGGCGCTGCCGCCGGAATCTTTACCCGAACAATCTGATTGCCAATCAACCGAAGCTAGTGTTGCAGGGGAAAAGCGGAAGAGAACGGACCCAGATTCTGATACTGCAAATCCGAAGCCGGATCCGTCTCTGAATCCTCTTTGGAAAACCAGTTTATGCTCCTACTTTAGGCGTCATTCGGGGTCGTGTAGCCATGGAAGTGCTTGTCGCTACGCTCATGGCGAGGAGGAGCTTAGGCAACGCCCTGATAACTCGTGGGATCCTACGTCGGAGCGGGCTAAGAAGGTGATGAAAGTGGAGGAGGATGTTAAGGAAGAGGAGGTCATGATGACGGAGGCCGTTGTTGACGATGACGATGAGGACGGCAATGACGGAAGGGATAATGGGCTTAGTAAATGCTTAGTTCATTTGCCTTGA ATGGCGGCCTCTTCGATTGAAGAAACCCTTGTAATCGAAGCCCCAAACGCTTCCGACGATCATCTCCAAGCATCGGCGGACGCCCAAGACAATACCGATAACCTCCCACAAACTACGGCGCTGCCGCCGGAATCTTTACCCGAACAATCTGATTGCCAATCAACCGAAGCTAGTGTTGCAGGGGAAAAGCGGAAGAGAACGGACCCAGATTCTGATACTGCAAATCCGAAGCCGGATCCGTCTCTGAATCCTCTTTGGAAAACCAGTTTATGCTCCTACTTTAGGCGTCATTCGGGGTCGTGTAGCCATGGAAGTGCTTGTCGCTACGCTCATGGCGAGGAGGAGCTTAGGCAACGCCCTGATAACTCGTGGGATCCTACGTCGGAGCGGGCTAAGAAGGTGATGAAAGTGGAGGAGGATGTTAAGGAAGAGGAGGTCATGATGACGGAGGCCGTTGTTGACGATGACGATGAGGACGGCAATGACGGAAGGGATAATGGGCTTAGTAAATGCTTAGTTCATTTGCCTTGA ATGGCGGCCTCTTCGATTGAAGAAACCCTTGTAATCGAAGCCCCAAACGCTTCCGACGATCATCTCCAAGCATCGGCGGACGCCCAAGACAATACCGATAACCTCCCACAAACTACGGCGCTGCCGCCGGAATCTTTACCCGAACAATCTGATTGCCAATCAACCGAAGCTAGTGTTGCAGGGGAAAAGCGGAAGAGAACGGACCCAGATTCTGATACTGCAAATCCGAAGCCGGATCCGTCTCTGAATCCTCTTTGGAAAACCAGTTTATGCTCCTACTTTAGGCGTCATTCGGGGTCGTGTAGCCATGGAAGTGCTTGTCGCTACGCTCATGGCGAGGAGGAGCTTAGGCAACGCCCTGATAACTCGTGGGATCCTACGTCGGAGCGGGCTAAGAAGGTGATGAAAGTGGAGGAGGATGTTAAGGAAGAGGAGGTCATGATGACGGAGGCCGTTGTTGACGATGACGATGAGGACGGCAATGACGGAAGGGATAATGGGCTTAGTAAATGCTTAGTTCATTTGCCTTGA MAASSIEETLVIEAPNASDDHLQASADAQDNTDNLPQTTALPPESLPEQSDCQSTEASVAGEKRKRTDPDSDTANPKPDPSLNPLWKTSLCSYFRRHSGSCSHGSACRYAHGEEELRQRPDNSWDPTSERAKKVMKVEEDVKEEEVMMTEAVVDDDDEDGNDGRDNGLSKCLVHLP Homology
BLAST of Lcy07g016430 vs. ExPASy Swiss-Prot
Match: Q8L7S3 (Zinc finger CCCH domain-containing protein 24 OS=Arabidopsis thaliana OX=3702 GN=At2g28450 PE=1 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 5.4e-26 Identity = 70/145 (48.28%), Postives = 88/145 (60.69%), Query Frame = 0
BLAST of Lcy07g016430 vs. ExPASy Swiss-Prot
Match: Q9LT81 (Zinc finger CCCH domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=At3g19360 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.5e-04 Identity = 26/64 (40.62%), Postives = 36/64 (56.25%), Query Frame = 0
BLAST of Lcy07g016430 vs. ExPASy TrEMBL
Match: A0A6J1K3X1 (zinc finger CCCH domain-containing protein 24 OS=Cucurbita maxima OX=3661 GN=LOC111490955 PE=3 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 5.5e-82 Identity = 160/176 (90.91%), Postives = 163/176 (92.61%), Query Frame = 0
BLAST of Lcy07g016430 vs. ExPASy TrEMBL
Match: A0A6J1H2G6 (zinc finger CCCH domain-containing protein 24 OS=Cucurbita moschata OX=3662 GN=LOC111459421 PE=3 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81 Identity = 160/176 (90.91%), Postives = 163/176 (92.61%), Query Frame = 0
BLAST of Lcy07g016430 vs. ExPASy TrEMBL
Match: A0A0A0KDA7 (C3H1-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G140820 PE=3 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 7.4e-71 Identity = 144/177 (81.36%), Postives = 152/177 (85.88%), Query Frame = 0
BLAST of Lcy07g016430 vs. ExPASy TrEMBL
Match: A0A5D3CSW9 (Zinc finger CCCH domain-containing protein 24 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00210 PE=3 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 4.8e-70 Identity = 142/176 (80.68%), Postives = 151/176 (85.80%), Query Frame = 0
BLAST of Lcy07g016430 vs. ExPASy TrEMBL
Match: A0A1S3CKC6 (zinc finger CCCH domain-containing protein 24 OS=Cucumis melo OX=3656 GN=LOC103501945 PE=3 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 4.8e-70 Identity = 142/176 (80.68%), Postives = 151/176 (85.80%), Query Frame = 0
BLAST of Lcy07g016430 vs. NCBI nr
Match: KAG6605546.1 (Zinc finger CCCH domain-containing protein 24, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 315.5 bits (807), Expect = 3.0e-82 Identity = 161/176 (91.48%), Postives = 164/176 (93.18%), Query Frame = 0
BLAST of Lcy07g016430 vs. NCBI nr
Match: XP_022995395.1 (zinc finger CCCH domain-containing protein 24 [Cucurbita maxima]) HSP 1 Score: 313.5 bits (802), Expect = 1.1e-81 Identity = 160/176 (90.91%), Postives = 163/176 (92.61%), Query Frame = 0
BLAST of Lcy07g016430 vs. NCBI nr
Match: XP_023534370.1 (zinc finger CCCH domain-containing protein 24 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 313.2 bits (801), Expect = 1.5e-81 Identity = 160/176 (90.91%), Postives = 163/176 (92.61%), Query Frame = 0
BLAST of Lcy07g016430 vs. NCBI nr
Match: XP_022958090.1 (zinc finger CCCH domain-containing protein 24 [Cucurbita moschata]) HSP 1 Score: 312.4 bits (799), Expect = 2.5e-81 Identity = 160/176 (90.91%), Postives = 163/176 (92.61%), Query Frame = 0
BLAST of Lcy07g016430 vs. NCBI nr
Match: XP_038901963.1 (zinc finger CCCH domain-containing protein 24 [Benincasa hispida]) HSP 1 Score: 306.6 bits (784), Expect = 1.4e-79 Identity = 157/176 (89.20%), Postives = 162/176 (92.05%), Query Frame = 0
BLAST of Lcy07g016430 vs. TAIR 10
Match: AT2G28450.1 (zinc finger (CCCH-type) family protein ) HSP 1 Score: 119.0 bits (297), Expect = 3.8e-27 Identity = 70/145 (48.28%), Postives = 88/145 (60.69%), Query Frame = 0
BLAST of Lcy07g016430 vs. TAIR 10
Match: AT2G28450.2 (zinc finger (CCCH-type) family protein ) HSP 1 Score: 119.0 bits (297), Expect = 3.8e-27 Identity = 70/145 (48.28%), Postives = 88/145 (60.69%), Query Frame = 0
BLAST of Lcy07g016430 vs. TAIR 10
Match: AT3G19360.1 (Zinc finger (CCCH-type) family protein ) HSP 1 Score: 47.8 bits (112), Expect = 1.1e-05 Identity = 26/64 (40.62%), Postives = 36/64 (56.25%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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