Lcy07g016280 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTGAAGAAGCTTTTAAATCCTGAAAACTCAACTTACATGGCGATTGCAACGGTAACTGCTCCACGATCCTCAACTCATCTCACTGGGTCGCCCAAAAATGGCGGATTCACGTTCCGGGTTACCGCCATTTAACGACGATGACAACGTCCACGAAGGCGTCCCTGACATCCCGGTTGAGATTGTGAGCGACGAGGAAATGGCCCTAATCGAAGCTGCCTTAGCCGCTGCCCTCGGCACTGCTCGATCTTCAACCTCCGCTATTCATTCCCCTTCTTGTTCTTCTCAGAATCTCTTCAACACCAGGTCTATTCAGTCTATTACCGTCCTTTCCAAGAGAGGCTTCTCTTCTTCCCAGCCAGATATTGAAGATTTCCGCAAATTTGCGAGTACCCAGAAGAGGATCAAAGTCAACGAATCGCTTCTGCGGCGTTTTAGGAGGAAGAAGGGCTTGGCCGTCACTGATCTCACTCGCATGGTATGGAATTCTTGTTTGGTTTTGTTTGATTTATGTGGATGGTTTTGGAGTTTTTTCTGCTTGTTATGATCGTCAAAGTATTACTGTCTACTGGTTTTTGCAGTTTGAAATTGTGGCTGTTTACATATTATTGTCAATAGTCAAATTTAGAATTTTAGTTTGATCAAATTAAACTTTGATCTTGAATGAGTGTTGCAACTAATATACCTGCTCAAAACTGAATTAGAAAATTATCTTGGAATTAATACTAGATTAAACAAAATTCAAAATAAAACACCCGAAATCACATCACAGAAATGTCCAAATCCAATTGTGAAAATACTTGACCTAGCCAACAATGAAGTCAATAAAGACGCTCAAACTCAAGTTAAAATAATTAAAATCATCCAACCGGATTGGAAGAATCAATACTAAAAAAAATAGTCATGTCCAAGTATAAGAAGGCCTGGTCACAATTTCTTTTCCTTTCGATATGGAAACTTGTATAATTGAGTGTATCGATTGCATTACTAATTCAAGTGTTATGGTTTAATTTAAACTGCATAACTTATTTAAGAGTAGGGTTTAAATGGATGAAATTCAAACTGAGAGTAAAAACTGAACTTTTTCCCGGGGATGATTACGGGCCCGTTTGGAATACCTTTTAGTTTAAATGTTTTTCAAGAATGCATTTTTTTCTAAAACATTTTGTATAAAAATTATTTAGAATTTAAACACTCACATGGTTACGTTTCCTCATAAGTGTTTTTATACAAGTTATTATATACTTAAAAACTCTTTTTGAAAAATTTGCTTTCAAGTGTTTCTTGCAACATAGTTTATTTCTCAATCTCATTTTAGTCATGCTTAGTGGTTGCCCAACATTAGATTTTTTTTTTTAAAAGTGATTTCTTTTTTTCAAAATTAAACACTTGAAAAGTCAAACCAGACATACTCTATGTCTCTAATTAAAATGAAACGGGAGTCACTCGGTTTAGAATGAGTTTTGTTAAGTATATAGCAAAATTATTTTGTAACTTCAGGAAAAAAAATGCTTGATGACAAATTAGTTTGTTTCTATATTCTTATAAGTACTTCTTTCATAACCACTTTTATGTTACACTCATGATAACTTTGAGTAGGGAGTGCTTAAACGCTTCCAAACATAGCCTGAAGCTGCAGCCTGTTGTTAATTTGAACTGGGAGAATTATCTACATGTTACGCTTGTTCTAGTTCGGTCATATAAGGAACTCTTGAAGTATCAGAAGATAATATTTTCTTACATTGATCTGATTTTTCCCATCTTTTTATGGGGTGGAAAATTTATGAACTTATCTTCTGAGTTCTGACATGGCATCTGCAGGAATGGTGTGAAAAACAGATGGAGTTTTCTCTCCTCTATGGATCACGGAGAAAAACCAAAGCTATGGAAGCAGGTATTGCACGCCATGCAATGCTTGAAGCGGAGGTAAATTTTTAGTCTCCACATTGCACTAATTCCATTTCTGCATGCTCTTTAGTATTAGTCGTTTCTTACTTGTAGCATAAAAACGTCTTAACCAAAAAACACTTTTACTAAATAAAATGGCTCTTGTGACCACATGTGATGCTTGATTCATTTATCATATATATGACCTTGTTAGGACTGAGTTTTCTGTGTTAGTTCCTCAGCTTACATGTCTTTCGACTAAATCCATAGGATAGCTAGCTGCCTAATCCTATAACATTAAGTGTCAAGTATCTTGTTATCAAAACTTGTGAACATTTATTGAGTATTCTTGGATAATTTGGAAGTTAGGTTCTATCAACATAAACAGAACTAATTGTTATTTTCTCCACTTTACCACATTTAATCGGTACTCTATTTGAATCCTTGTAGGTTGTTAAAAAAGTTAAATTTCAGCTGAAATCAGATGAAGATATATGGGCTTTGAAGTTTCTTAATTTCATATTTGGTGTAAAACAACTACTGTTTGAAGGATTGACTCGTGAACTGCCTGTGTAAGTCCCATTTTTTTTTGTCCAATTGTCCCGATCAATATTGTTTGTCCATCAGCAGACTTTCTAATAACACTCAGAAACCGTTATGCCTTGTGATGGAACAATTTTGTGACACATCAGGGACATTGAAATTGATAATTAGGCAGTTCTACTGCCTGCTTCAATTCTCCTCAATGAATAGGGGAATGTTTTGTTTGGTTAAACAAGTTCTTTTTCTGCTCTTCTTTTGCAACTTTCTTGACTTATCAATTACTGTCATTATTAGTACTATGCACTATACTTTATTCTTATGAACAACACGAAAAATGCTTTTTTTAGCTTCATTATTTTGGGATGTTAATATTAGCTTTCAAATTAAATACATCTATTAGAAAATGAGTTTAGTGTGATGTAATGTGAAAGTGATATGGTGCTTACACTGTTACTGCCTGTCATATGGCATTTGTTTTCCTGTTTCCAGATGAGCATTTTACGTTTTTCATCATTTGATTAAAAAATTTATTCTATTTTGCTTCCCTTTCGTTTTCAGTCATCTGATCTTGTTATCTGTTCTTGAACACACGATTTAAAGCTATTATTAGGATTATTTCTCTTACCTGAACTTCCATTTCTTTCAATCTCACTGAAACTATATTTGCATTGATGTCAGAATAAGCTATGTGGAAGGTGTATGGATGGTTGGTGTGATTGATGAAATCCAGATGTTGGAGATCGACACCGGTAAAATACCGATGTTGGTAGACACAAAAACGCGTATGCGGGATACAATTCCAGCTGAACCACAACGAAGAAATGGAAAGTATGTAATTATGGTTGTTTTGTTTAAGCCATAGGATTATCATTCAATGTTCATCTCTTGATTGCAAAGAATGCTGACTTAGTTACACTTATTATTTTTGCAGGCTTCAATTGATGATCTATAAATTCTTATTGGACAGTCTAATTTCTGATGGCTTCTCTTCCAGACAATTTTTTGATTTCTTTTCTTTGAATCCTCATTCCACCTTGTCTGAAGAAATTTCGGACAGCACTACTCCACTTGGTTTCACTGCAAAGGTAGAGCTTTTAAATTCTGCTTGTTTTTCCGCAAAAATAGTAATAATAATAATAATGAAACAAATGATACTAACTTACATTTTGAAAATAGGCAAAAAAAAAAAAATTGATTATCTGACTAAATATTTACATAAACTGGAGTTTGTTTCCAAGCTCTCAACATGATAGATTTTCTTCGGGAAGTTTGAGAAAAGTGTCAGCATAACATTATGGAGTTCGAGGAAACTAACCCCTCTGCAAATTCTTGTGGTTTTGTTTCTTATCTTGTCTACACAGACTCTTGATGAAGTTGTGAGATACTATATAAATTGTTGTAGCATGCTGCCTCTTAGTCACAGTCAACTCTTACTAAGGTACATAACATTTATACGTAAAGGTTATGCTTTCCTTCAATGGTTGTGTTTGATTAGCATTACTTTTATATATATTGGACTTCGAACCCTGTTTTTCATACTTCGCCGTTCCTTCTCATGCTAATCGAAGCTCGTGCTTCGCAATTTGAAAACTGAAGCTTCATTATTATCTGTGCAGTATTTGTTTCTGAGCAATTTTTCCGTTCTGATAAGATATGGTTGATTGTTATGACCCAGATATGAATCACAAAAGAATCAGCCTGTTAGCTATTATCATAATGATCTTGTGGTACTTGTTTCTGAGCAGTATCTGAGTTCTGATAAGATATGGTTGATTGTTATGGTGCAGATATGAATCACAAAAGGATCAGTCTATTATTGTTGAAGATAAATTTGCATATGATCATGGTTGGCTCAAGAGTCTAATTGAGACCTTACTCCAGGTCTGGCATGGACAGCGAGAATCCGAATGTACTCCACAAGAAGAACGATGGAAATGTCGACATTGCGAATTTGCTTTGGTTTGCCCTGCAAATGCTAACTTCGCCGCTACCAAAAAGCCCGAGTAATTCAACTCGAAAATGCTCGGGTTTGGTCTCTCCTGCCAACTAACAAGATTATCTTCTTCAAGTTTATGGTTCACATTCTGACCCATCCCCTCAGAAGCTGTAGTTTTATGGTTCACATTCTTGTGATTTATTTTACAACAGATATATCTATTTGTATTGAGCATGTATTTACTTATGGTGCAAAATTGCATTTGTTAGAAACAGATGTATGTGTTGTAGTGCAATGAAATTCTTCATATTGGAGAACTCTTCTTGGTTGTATTACTTCTCAACTTGACTAAAAAACGACAAGCTTGAGCAGTTTAAAAAAGAAAAAG TTTGAAGAAGCTTTTAAATCCTGAAAACTCAACTTACATGGCGATTGCAACGGTAACTGCTCCACGATCCTCAACTCATCTCACTGGGTCGCCCAAAAATGGCGGATTCACGTTCCGGGTTACCGCCATTTAACGACGATGACAACGTCCACGAAGGCGTCCCTGACATCCCGGTTGAGATTGTGAGCGACGAGGAAATGGCCCTAATCGAAGCTGCCTTAGCCGCTGCCCTCGGCACTGCTCGATCTTCAACCTCCGCTATTCATTCCCCTTCTTGTTCTTCTCAGAATCTCTTCAACACCAGGTCTATTCAGTCTATTACCGTCCTTTCCAAGAGAGGCTTCTCTTCTTCCCAGCCAGATATTGAAGATTTCCGCAAATTTGCGAGTACCCAGAAGAGGATCAAAGTCAACGAATCGCTTCTGCGGCGTTTTAGGAGGAAGAAGGGCTTGGCCGTCACTGATCTCACTCGCATGGAATGGTGTGAAAAACAGATGGAGTTTTCTCTCCTCTATGGATCACGGAGAAAAACCAAAGCTATGGAAGCAGGTATTGCACGCCATGCAATGCTTGAAGCGGAGGTTGTTAAAAAAGTTAAATTTCAGCTGAAATCAGATGAAGATATATGGGCTTTGAAGTTTCTTAATTTCATATTTGGTGTAAAACAACTACTGTTTGAAGGATTGACTCGTGAACTGCCTGTAATAAGCTATGTGGAAGGTGTATGGATGGTTGGTGTGATTGATGAAATCCAGATGTTGGAGATCGACACCGGTAAAATACCGATGTTGGTAGACACAAAAACGCGTATGCGGGATACAATTCCAGCTGAACCACAACGAAGAAATGGAAAGCTTCAATTGATGATCTATAAATTCTTATTGGACAGTCTAATTTCTGATGGCTTCTCTTCCAGACAATTTTTTGATTTCTTTTCTTTGAATCCTCATTCCACCTTGTCTGAAGAAATTTCGGACAGCACTACTCCACTTGGTTTCACTGCAAAGACTCTTGATGAAGTTGTGAGATACTATATAAATTGTTGTAGCATGCTGCCTCTTAGTCACAGTCAACTCTTACTAAGATATGAATCACAAAAGGATCAGTCTATTATTGTTGAAGATAAATTTGCATATGATCATGGTTGGCTCAAGAGTCTAATTGAGACCTTACTCCAGGTCTGGCATGGACAGCGAGAATCCGAATGTACTCCACAAGAAGAACGATGGAAATGTCGACATTGCGAATTTGCTTTGGTTTGCCCTGCAAATGCTAACTTCGCCGCTACCAAAAAGCCCGAGTAATTCAACTCGAAAATGCTCGGGTTTGGTCTCTCCTGCCAACTAACAAGATTATCTTCTTCAAGTTTATGGTTCACATTCTGACCCATCCCCTCAGAAGCTGTAGTTTTATGGTTCACATTCTTGTGATTTATTTTACAACAGATATATCTATTTGTATTGAGCATGTATTTACTTATGGTGCAAAATTGCATTTGTTAGAAACAGATGTATGTGTTGTAGTGCAATGAAATTCTTCATATTGGAGAACTCTTCTTGGTTGTATTACTTCTCAACTTGACTAAAAAACGACAAGCTTGAGCAGTTTAAAAAAGAAAAAG ATGGCGGATTCACGTTCCGGGTTACCGCCATTTAACGACGATGACAACGTCCACGAAGGCGTCCCTGACATCCCGGTTGAGATTGTGAGCGACGAGGAAATGGCCCTAATCGAAGCTGCCTTAGCCGCTGCCCTCGGCACTGCTCGATCTTCAACCTCCGCTATTCATTCCCCTTCTTGTTCTTCTCAGAATCTCTTCAACACCAGGTCTATTCAGTCTATTACCGTCCTTTCCAAGAGAGGCTTCTCTTCTTCCCAGCCAGATATTGAAGATTTCCGCAAATTTGCGAGTACCCAGAAGAGGATCAAAGTCAACGAATCGCTTCTGCGGCGTTTTAGGAGGAAGAAGGGCTTGGCCGTCACTGATCTCACTCGCATGGAATGGTGTGAAAAACAGATGGAGTTTTCTCTCCTCTATGGATCACGGAGAAAAACCAAAGCTATGGAAGCAGGTATTGCACGCCATGCAATGCTTGAAGCGGAGGTTGTTAAAAAAGTTAAATTTCAGCTGAAATCAGATGAAGATATATGGGCTTTGAAGTTTCTTAATTTCATATTTGGTGTAAAACAACTACTGTTTGAAGGATTGACTCGTGAACTGCCTGTAATAAGCTATGTGGAAGGTGTATGGATGGTTGGTGTGATTGATGAAATCCAGATGTTGGAGATCGACACCGGTAAAATACCGATGTTGGTAGACACAAAAACGCGTATGCGGGATACAATTCCAGCTGAACCACAACGAAGAAATGGAAAGCTTCAATTGATGATCTATAAATTCTTATTGGACAGTCTAATTTCTGATGGCTTCTCTTCCAGACAATTTTTTGATTTCTTTTCTTTGAATCCTCATTCCACCTTGTCTGAAGAAATTTCGGACAGCACTACTCCACTTGGTTTCACTGCAAAGACTCTTGATGAAGTTGTGAGATACTATATAAATTGTTGTAGCATGCTGCCTCTTAGTCACAGTCAACTCTTACTAAGATATGAATCACAAAAGGATCAGTCTATTATTGTTGAAGATAAATTTGCATATGATCATGGTTGGCTCAAGAGTCTAATTGAGACCTTACTCCAGGTCTGGCATGGACAGCGAGAATCCGAATGTACTCCACAAGAAGAACGATGGAAATGTCGACATTGCGAATTTGCTTTGGTTTGCCCTGCAAATGCTAACTTCGCCGCTACCAAAAAGCCCGAGTAA MADSRSGLPPFNDDDNVHEGVPDIPVEIVSDEEMALIEAALAAALGTARSSTSAIHSPSCSSQNLFNTRSIQSITVLSKRGFSSSQPDIEDFRKFASTQKRIKVNESLLRRFRRKKGLAVTDLTRMEWCEKQMEFSLLYGSRRKTKAMEAGIARHAMLEAEVVKKVKFQLKSDEDIWALKFLNFIFGVKQLLFEGLTRELPVISYVEGVWMVGVIDEIQMLEIDTGKIPMLVDTKTRMRDTIPAEPQRRNGKLQLMIYKFLLDSLISDGFSSRQFFDFFSLNPHSTLSEEISDSTTPLGFTAKTLDEVVRYYINCCSMLPLSHSQLLLRYESQKDQSIIVEDKFAYDHGWLKSLIETLLQVWHGQRESECTPQEERWKCRHCEFALVCPANANFAATKKPE Homology
BLAST of Lcy07g016280 vs. ExPASy Swiss-Prot
Match: Q9FKK6 (Exonuclease V, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g60370 PE=2 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 1.0e-96 Identity = 193/393 (49.11%), Postives = 266/393 (67.68%), Query Frame = 0
BLAST of Lcy07g016280 vs. ExPASy Swiss-Prot
Match: A2VDX7 (Exonuclease V OS=Bos taurus OX=9913 GN=EXO5 PE=2 SV=2) HSP 1 Score: 139.4 bits (350), Expect = 8.7e-32 Identity = 99/338 (29.29%), Postives = 164/338 (48.52%), Query Frame = 0
BLAST of Lcy07g016280 vs. ExPASy Swiss-Prot
Match: Q9CXP9 (Exonuclease V OS=Mus musculus OX=10090 GN=Exo5 PE=2 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 1.3e-27 Identity = 94/321 (29.28%), Postives = 150/321 (46.73%), Query Frame = 0
BLAST of Lcy07g016280 vs. ExPASy Swiss-Prot
Match: Q9H790 (Exonuclease V OS=Homo sapiens OX=9606 GN=EXO5 PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 9.3e-26 Identity = 80/286 (27.97%), Postives = 134/286 (46.85%), Query Frame = 0
BLAST of Lcy07g016280 vs. ExPASy Swiss-Prot
Match: F1Q514 (Exonuclease V OS=Danio rerio OX=7955 GN=exo5 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.9e-24 Identity = 87/293 (29.69%), Postives = 138/293 (47.10%), Query Frame = 0
BLAST of Lcy07g016280 vs. ExPASy TrEMBL
Match: A0A6J1J5D7 (exonuclease V, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111483632 PE=3 SV=1) HSP 1 Score: 643.7 bits (1659), Expect = 5.3e-181 Identity = 326/401 (81.30%), Postives = 355/401 (88.53%), Query Frame = 0
BLAST of Lcy07g016280 vs. ExPASy TrEMBL
Match: A0A6J1FT99 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111448276 PE=3 SV=1) HSP 1 Score: 642.5 bits (1656), Expect = 1.2e-180 Identity = 327/401 (81.55%), Postives = 354/401 (88.28%), Query Frame = 0
BLAST of Lcy07g016280 vs. ExPASy TrEMBL
Match: A0A0A0KC56 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290860 PE=3 SV=1) HSP 1 Score: 634.4 bits (1635), Expect = 3.2e-178 Identity = 320/392 (81.63%), Postives = 350/392 (89.29%), Query Frame = 0
BLAST of Lcy07g016280 vs. ExPASy TrEMBL
Match: A0A5A7SXN1 (Exonuclease V OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00520 PE=3 SV=1) HSP 1 Score: 631.3 bits (1627), Expect = 2.7e-177 Identity = 322/393 (81.93%), Postives = 349/393 (88.80%), Query Frame = 0
BLAST of Lcy07g016280 vs. ExPASy TrEMBL
Match: A0A1S3CLU8 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501929 PE=3 SV=1) HSP 1 Score: 629.0 bits (1621), Expect = 1.3e-176 Identity = 321/393 (81.68%), Postives = 348/393 (88.55%), Query Frame = 0
BLAST of Lcy07g016280 vs. NCBI nr
Match: XP_038902050.1 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic [Benincasa hispida]) HSP 1 Score: 647.1 bits (1668), Expect = 9.8e-182 Identity = 330/401 (82.29%), Postives = 357/401 (89.03%), Query Frame = 0
BLAST of Lcy07g016280 vs. NCBI nr
Match: XP_023511975.1 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 645.6 bits (1664), Expect = 2.9e-181 Identity = 329/401 (82.04%), Postives = 355/401 (88.53%), Query Frame = 0
BLAST of Lcy07g016280 vs. NCBI nr
Match: XP_022985622.1 (exonuclease V, chloroplastic [Cucurbita maxima] >XP_022985623.1 exonuclease V, chloroplastic [Cucurbita maxima] >XP_022985624.1 exonuclease V, chloroplastic [Cucurbita maxima]) HSP 1 Score: 643.7 bits (1659), Expect = 1.1e-180 Identity = 326/401 (81.30%), Postives = 355/401 (88.53%), Query Frame = 0
BLAST of Lcy07g016280 vs. NCBI nr
Match: XP_022943527.1 (LOW QUALITY PROTEIN: exonuclease V, chloroplastic-like [Cucurbita moschata]) HSP 1 Score: 642.5 bits (1656), Expect = 2.4e-180 Identity = 327/401 (81.55%), Postives = 354/401 (88.28%), Query Frame = 0
BLAST of Lcy07g016280 vs. NCBI nr
Match: KAG6570766.1 (Exonuclease V, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 641.7 bits (1654), Expect = 4.1e-180 Identity = 326/401 (81.30%), Postives = 353/401 (88.03%), Query Frame = 0
BLAST of Lcy07g016280 vs. TAIR 10
Match: AT5G60370.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 355.1 bits (910), Expect = 7.2e-98 Identity = 193/393 (49.11%), Postives = 266/393 (67.68%), Query Frame = 0
BLAST of Lcy07g016280 vs. TAIR 10
Match: AT3G57110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G60370.1); Has 16 Blast hits to 16 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 4.2e-05 Identity = 40/121 (33.06%), Postives = 64/121 (52.89%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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