Lcy07g012210 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g012210
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Ferroxidase
Location	Chr07: 41464759 .. 41466612 (-)
RNA-Seq Expression	Lcy07g012210
Synteny	Lcy07g012210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTGAAGCCGGTCGCTGTACCAATGGCTACCAAACTGCTTCCACTGCGGAAGCTTTCAAGGATACTGAAGCTGCCGTCTTCTTCTTCTTCCTCTTTCAGGAAGTTTTCATATCTTTTAGAAGCTTCAAGACCTCCCCTCGATCTCTCCCATAATGTTCATCAGTTTCATCCTCCGTCTTTTTCTCGAAACTTCTGCTCCCGCCCTCTGGATTTCATCGGCGATGATCCTCGAGGCCCTGCCACCATTGATTATAGGTAATTTGTTCATTTTCTTTCTTTCCTTTTTCGATTTTTCAACCTTTCTTTAGTAGAAACTGCGTATTTCAATCGAAATTTTGAAAAAGAAGCGAAAGTTTGTAAGTTCCACCCCTTCCCCCAATTTTTTGCAATCTTCAAGCCTTTTCAATTTGGTAATTGTTTTAGGTCTGCTTGATTCGTGAATTTTTGGTCCAATGTCTCCAATTGTTTTCACTTGTCTAATTTTTTACTAAACTGAAAATGGGTTCGTGGTAATTCAACAAAGTGTTGCGAAGGTCTTACCTTTAGTTCAATTTCCCTTGATGGACAAATTACAGTTTCTATTCATGGGGTTTTCTTTGAGCGTTGGTATGATAGTTGAATGCATTTGGTAGAGAAGGGCTCAAGTGATCTTGGCTAATCTTTGCTGCAGTTCTCTGATGCAGGAGGGAGAGTTTCATAATCTAGCTGATTCCACAATACAGGGTCTGCAAGAGAAATTAGAGGTAATTGTATGTCGATGAATTGCCATTTTTTTCCCTCTCTTGATTTTATTCTTATGAATTGTATTTTTCATGTACATATTTCCGAATTGCTGCTAAAAATTTTGTTAAGTTTATTTCATTGCTTGCCAGGAATATGGCGATGATCTCCAAATTGATGGCTTTGATGTGGACTATGGGGTGAGAATGACTTAGCAGTTCTAAGATTTGATGATTTCATTTCATATGTATACATAATGCTTAATTTTATCCAATTTTCATTACGCAGAATGAGGTACTGACCTTAAGGCTCGGCGATCTCGGCACCTACGTCTTGAACAAACAAACGCCAAACAGACAACTTTGGCTTTCTTCCCCTGTGAGGTATCATGCTTCCCTAGTGACTTATTTTCCCGTTGAATGATTAGAATGTCAATCTACAATGTTTATCCTTTCCATTTGTTTCAAAGATCATTTCAGACCTTGTACCTGTTTCCATTTCATGACAAAGTTCAGCACTTGTCTTTTCAAAGTCTTTAGTAATAATGGAACTTGTTTCTGTTCATATAACAACATTTACCCATTCATAAGAGCATGCCTAATATCCCTAGATGTCTTTAACTTATATAAGAGCAGAAAAGAAGGAATGAGACTAGTTTTAATTTGGTCCTGAGAGAACGAGGAACATATATTTAGGCATTGTACACAACTTTGTGACAACCCAGGTTATGTTCTTCCTTGCAGTGGTCCATCGAGGTTTGATTGGGATCAGAACTCACAGGCTTGGATTTATAGGCGGAACAAAGCAAACCTGTTGAGGCTCTTAGAAACTGAATTGGCGCAGCTCTGTGGTGAGCCAATTGACCTTTCTTGAGCCCTTTAAATAACTTGGACATGGTGAGGTTATTCTGAAGCATTTAGACGCATATTTATGCAGCTCTTTCAGTTTGGTTTACCTTCTTAACTATCCCAGAGCCCACATCTTTTTCTCGTCTTCATTCTACCTGTTGCATTATATGCAATAATATGTTCTGATTCTATTGCTTCGAGTATAACTATTCATGATTAACTTGAGCTATGCTCAACTGACCAAGATATAATTAATCTTTTAAAAAGCGAAAGATATGACTTCCCAC

mRNA sequence

TTGAAGCCGGTCGCTGTACCAATGGCTACCAAACTGCTTCCACTGCGGAAGCTTTCAAGGATACTGAAGCTGCCGTCTTCTTCTTCTTCCTCTTTCAGGAAGTTTTCATATCTTTTAGAAGCTTCAAGACCTCCCCTCGATCTCTCCCATAATGTTCATCAGTTTCATCCTCCGTCTTTTTCTCGAAACTTCTGCTCCCGCCCTCTGGATTTCATCGGCGATGATCCTCGAGGCCCTGCCACCATTGATTATAGTTCTCTGATGCAGGAGGGAGAGTTTCATAATCTAGCTGATTCCACAATACAGGGTCTGCAAGAGAAATTAGAGGAATATGGCGATGATCTCCAAATTGATGGCTTTGATGTGGACTATGGGAATGAGGTACTGACCTTAAGGCTCGGCGATCTCGGCACCTACGTCTTGAACAAACAAACGCCAAACAGACAACTTTGGCTTTCTTCCCCTGTGAGTGGTCCATCGAGGTTTGATTGGGATCAGAACTCACAGGCTTGGATTTATAGGCGGAACAAAGCAAACCTGTTGAGGCTCTTAGAAACTGAATTGGCGCAGCTCTGTGGTGAGCCAATTGACCTTTCTTGAGCCCTTTAAATAACTTGGACATGGTGAGGTTATTCTGAAGCATTTAGACGCATATTTATGCAGCTCTTTCAGTTTGGTTTACCTTCTTAACTATCCCAGAGCCCACATCTTTTTCTCGTCTTCATTCTACCTGTTGCATTATATGCAATAATATGTTCTGATTCTATTGCTTCGAGTATAACTATTCATGATTAACTTGAGCTATGCTCAACTGACCAAGATATAATTAATCTTTTAAAAAGCGAAAGATATGACTTCCCAC

Coding sequence (CDS)

ATGGCTACCAAACTGCTTCCACTGCGGAAGCTTTCAAGGATACTGAAGCTGCCGTCTTCTTCTTCTTCCTCTTTCAGGAAGTTTTCATATCTTTTAGAAGCTTCAAGACCTCCCCTCGATCTCTCCCATAATGTTCATCAGTTTCATCCTCCGTCTTTTTCTCGAAACTTCTGCTCCCGCCCTCTGGATTTCATCGGCGATGATCCTCGAGGCCCTGCCACCATTGATTATAGTTCTCTGATGCAGGAGGGAGAGTTTCATAATCTAGCTGATTCCACAATACAGGGTCTGCAAGAGAAATTAGAGGAATATGGCGATGATCTCCAAATTGATGGCTTTGATGTGGACTATGGGAATGAGGTACTGACCTTAAGGCTCGGCGATCTCGGCACCTACGTCTTGAACAAACAAACGCCAAACAGACAACTTTGGCTTTCTTCCCCTGTGAGTGGTCCATCGAGGTTTGATTGGGATCAGAACTCACAGGCTTGGATTTATAGGCGGAACAAAGCAAACCTGTTGAGGCTCTTAGAAACTGAATTGGCGCAGCTCTGTGGTGAGCCAATTGACCTTTCTTGA

Protein sequence

MATKLLPLRKLSRILKLPSSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRNFCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDYGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQLCGEPIDLS

Homology

[Close]

BLAST of Lcy07g012210 vs. ExPASy Swiss-Prot
Match: Q9ZR07 (Frataxin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FH PE=1 SV=2)

HSP 1 Score: 205.7 bits (522), Expect = 4.7e-52
Identity = 109/189 (57.67%), Postives = 135/189 (71.43%), Query Frame = 0


Query: 8   LRKLSRILKLPSS--SSSSFRKFSYLLEASRPPLDLSHNVHQ--FHPPSFSRNFCSRPLD 67
           LRKL R LKL  +   S+  R  S L++ S  PLD    +     H    +R+F S    
Sbjct: 9   LRKLPRFLKLSPTLLRSNGVRVSSNLIQDSIEPLDSFWRIGSRIRHDSLTTRSFSS---- 68

Query: 68  FIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDYGNEVLT 127
                 +GPA++DYSS++QE EFH LA+ TI  L EK+E+YGD++QIDGFD+DYGNEVLT
Sbjct: 69  ------QGPASVDYSSVLQEEEFHKLANFTINHLLEKIEDYGDNVQIDGFDIDYGNEVLT 128

Query: 128 LRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQ 187
           L+LG LGTYVLNKQTPNRQ+W+SSPVSGPSRFDWD+++ AWIYRR +A L +LLE EL  
Sbjct: 129 LKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDANAWIYRRTEAKLHKLLEEELEN 187

Query: 188 LCGEPIDLS 193
           LCGEPI LS
Sbjct: 189 LCGEPIQLS 187

[Close]

BLAST of Lcy07g012210 vs. ExPASy Swiss-Prot
Match: O35943 (Frataxin, mitochondrial OS=Mus musculus OX=10090 GN=Fxn PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 1.8e-22
Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = 0


Query: 70  RGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGD-DLQIDGFDVDYGNEVLTLRL-G 129
           R   T+D  S + E  +  LA+ T+  L E  E+  D    ++ +DV +G+ VLT++L G
Sbjct: 76  RNLGTLDNPSSLDETAYERLAEETLDSLAEFFEDLADKPYTLEDYDVSFGDGVLTIKLGG 135

Query: 130 DLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQLCGE 189
           DLGTYV+NKQTPN+Q+WLSSP SGP R+DW    + W+Y  +  +L  LL  EL +    
Sbjct: 136 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGKNWVYSHDGVSLHELLARELTKALNT 195

Query: 190 PIDLS 193
            +DLS
Sbjct: 196 KLDLS 198

[Close]

BLAST of Lcy07g012210 vs. ExPASy Swiss-Prot
Match: Q05B87 (Frataxin, mitochondrial OS=Bos taurus OX=9913 GN=FXN PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.1e-21
Identity = 53/125 (42.40%), Postives = 76/125 (60.80%), Query Frame = 0


Query: 70  RGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGD-DLQIDGFDVDYGNEVLTLRL-G 129
           R   T+  +  + +  +  LA+ T+  L E  E+  D     + +DV +G+ VLT++L G
Sbjct: 80  RTAGTLGDAGTLDDTTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGG 139

Query: 130 DLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQLCGE 189
           DLGTYV+NKQTPN+Q+WLSSP SGP R+DW    + W+Y  +  +L  LL TEL Q    
Sbjct: 140 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGRNWVYSHDGVSLHELLATELTQALKT 199

Query: 190 PIDLS 193
            +DLS
Sbjct: 200 KLDLS 202

[Close]

BLAST of Lcy07g012210 vs. ExPASy Swiss-Prot
Match: Q16595 (Frataxin, mitochondrial OS=Homo sapiens OX=9606 GN=FXN PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 3.3e-21
Identity = 52/125 (41.60%), Postives = 75/125 (60.00%), Query Frame = 0


Query: 70  RGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGD-DLQIDGFDVDYGNEVLTLRL-G 129
           R   T+ +   + E  +  LA+ T+  L E  E+  D     + +DV +G+ VLT++L G
Sbjct: 79  RKSGTLGHPGSLDETTYERLAEETLDSLAEFFEDLADKPYTFEDYDVSFGSGVLTVKLGG 138

Query: 130 DLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQLCGE 189
           DLGTYV+NKQTPN+Q+WLSSP SGP R+DW    + W+Y  +  +L  LL  EL +    
Sbjct: 139 DLGTYVINKQTPNKQIWLSSPSSGPKRYDW--TGKNWVYSHDGVSLHELLAAELTKALKT 198

Query: 190 PIDLS 193
            +DLS
Sbjct: 199 KLDLS 201

[Close]

BLAST of Lcy07g012210 vs. ExPASy Swiss-Prot
Match: O74831 (Frataxin homolog, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPCC1183.03c PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.3e-20
Identity = 42/116 (36.21%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 75  IDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDYGNEVLTLRLGDLGTYVL 134
           + ++  + + E+H +AD T+  L +  E+  +++    +D+ Y N V+TL LG+ GTYV+
Sbjct: 36  VRHNGALTDLEYHRVADDTLDVLNDTFEDLLEEVGKKDYDIQYANGVITLMLGEKGTYVI 95

Query: 135 NKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQLCGEPID 191
           NKQ P  Q+WLSSPVSGP  +++   S+ W   R++  LL +L +E ++    PI+
Sbjct: 96  NKQPPAHQIWLSSPVSGPKHYEYSLKSKTWCSTRDEGTLLGILSSEFSKWFSRPIE 151

[Close]

BLAST of Lcy07g012210 vs. ExPASy TrEMBL
Match: A0A6J1I2E7 (Ferroxidase OS=Cucurbita maxima OX=3661 GN=LOC111469879 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 2.8e-95
Identity = 177/196 (90.31%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKLP----SSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRN 60
           MATKLLPLRKLSRILK+P    SSSSSSFRK+SYLLE +RP LDLS NVHQFHPPSFSR+
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDF+GDD RGPATIDYSSLMQEGEFH L DSTI GLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLVDSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 180
           YGNEVLTLRLGDLGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQ+SQAWIYRRNKANLLRL
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 181 LETELAQLCGEPIDLS 193
           LETELAQLCGEPI+LS
Sbjct: 181 LETELAQLCGEPINLS 196

[Close]

BLAST of Lcy07g012210 vs. ExPASy TrEMBL
Match: A0A6J1G6C8 (Ferroxidase OS=Cucurbita moschata OX=3662 GN=LOC111451278 PE=3 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 6.8e-94
Identity = 175/196 (89.29%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKLP----SSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRN 60
           MATKLLPLRKLSRILK+P    SSSSSSFRK+SYLLE++RP LDLS NVHQFHPPSFSR+
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDF+GDD RGPATIDYSSLMQEGEFH LADSTI GLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 180
           YGNEVLTLRLG LGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQ+SQAWIYRR+KANLLRL
Sbjct: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180

Query: 181 LETELAQLCGEPIDLS 193
           LETEL QLCGEPI+LS
Sbjct: 181 LETELTQLCGEPINLS 196

[Close]

BLAST of Lcy07g012210 vs. ExPASy TrEMBL
Match: A0A6J1CG34 (Ferroxidase OS=Momordica charantia OX=3673 GN=LOC111011350 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 9.8e-93
Identity = 172/195 (88.21%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKLPSSSSSS---FRKFSYLLEASRPPLDLSHNVHQFHPPSFSRNF 60
           MATKLLPLRKLSRILK+PSSSS S   FR++SYLLEASRP L +S NVHQFHPPSFSR+F
Sbjct: 1   MATKLLPLRKLSRILKVPSSSSYSSPCFRRYSYLLEASRPLLGISDNVHQFHPPSFSRSF 60

Query: 61  CSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDY 120
           CSRPLDF+ DD RGPA+IDYSSLMQEG+FH LADSTI GLQEKLEEYGDDLQIDGFDVDY
Sbjct: 61  CSRPLDFVDDDSRGPASIDYSSLMQEGDFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDY 120

Query: 121 GNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLL 180
           GNEVLTL+LGDLGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLL
Sbjct: 121 GNEVLTLKLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLL 180

Query: 181 ETELAQLCGEPIDLS 193
           ETELA+LCGEPI LS
Sbjct: 181 ETELAELCGEPIGLS 195

[Close]

BLAST of Lcy07g012210 vs. ExPASy TrEMBL
Match: A0A1S3BJ48 (Ferroxidase OS=Cucumis melo OX=3656 GN=LOC103490464 PE=3 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89
Identity = 166/192 (86.46%), Postives = 178/192 (92.71%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKLPSSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRNFCSR 60
           MATKLLPL KLSRILKLPSSSS SFRK  YLLEAS P + +S+NVHQF PPSFS++FCSR
Sbjct: 1   MATKLLPLHKLSRILKLPSSSSCSFRKCPYLLEASIPLIHISNNVHQFQPPSFSQSFCSR 60

Query: 61  PLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDYGNE 120
           PLD +GDD RGPATIDYSSLMQEGEFH LAD TIQGLQEKLEEYGD+LQIDGFDVDYGNE
Sbjct: 61  PLDIVGDDSRGPATIDYSSLMQEGEFHRLADFTIQGLQEKLEEYGDNLQIDGFDVDYGNE 120

Query: 121 VLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETE 180
           VLTLRLG+LGTYVLNKQTPNRQ+WLSSP+SGPSRFDWDQNS+AWIYRRNKANLL LLETE
Sbjct: 121 VLTLRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSRAWIYRRNKANLLSLLETE 180

Query: 181 LAQLCGEPIDLS 193
           L QLCGEPI+LS
Sbjct: 181 LMQLCGEPINLS 192

[Close]

BLAST of Lcy07g012210 vs. ExPASy TrEMBL
Match: A0A0A0KAC6 (Ferroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G121430 PE=3 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 1.1e-88
Identity = 163/189 (86.24%), Postives = 173/189 (91.53%), Query Frame = 0


Query: 4   KLLPLRKLSRILKLPSSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRNFCSRPLD 63
           KLLPLRKLSRILKLPS SS SFRKF +LLEAS P + + +NVHQFHPPSF R+FCSRPLD
Sbjct: 35  KLLPLRKLSRILKLPSYSSCSFRKFPHLLEASSPLIHIFNNVHQFHPPSFLRSFCSRPLD 94

Query: 64  FIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDYGNEVLT 123
            +GDD RGPATIDYSSLMQEGEFH LAD  IQGLQEKLEEYGD+LQIDGFDVDYGNEVLT
Sbjct: 95  IVGDDSRGPATIDYSSLMQEGEFHRLADFAIQGLQEKLEEYGDNLQIDGFDVDYGNEVLT 154

Query: 124 LRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQ 183
           LRLG+LGTYVLNKQTPNRQ+WLSSP+SGPSRFDWDQNSQ WIYRRNKANLL LLETEL Q
Sbjct: 155 LRLGNLGTYVLNKQTPNRQIWLSSPLSGPSRFDWDQNSQTWIYRRNKANLLSLLETELTQ 214

Query: 184 LCGEPIDLS 193
           LCGEPIDLS
Sbjct: 215 LCGEPIDLS 223

[Close]

BLAST of Lcy07g012210 vs. NCBI nr
Match: XP_022971111.1 (frataxin, mitochondrial [Cucurbita maxima])

HSP 1 Score: 357.8 bits (917), Expect = 5.7e-95
Identity = 177/196 (90.31%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKLP----SSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRN 60
           MATKLLPLRKLSRILK+P    SSSSSSFRK+SYLLE +RP LDLS NVHQFHPPSFSR+
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDF+GDD RGPATIDYSSLMQEGEFH L DSTI GLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLVDSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 180
           YGNEVLTLRLGDLGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQ+SQAWIYRRNKANLLRL
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 181 LETELAQLCGEPIDLS 193
           LETELAQLCGEPI+LS
Sbjct: 181 LETELAQLCGEPINLS 196

[Close]

BLAST of Lcy07g012210 vs. NCBI nr
Match: KAG6604827.1 (Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 175/196 (89.29%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKLP----SSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRN 60
           MATKLLPLRKLSRILK+P    SSSSSSFRK+SYLLE++RP LDLS NVHQFHPPSFSR+
Sbjct: 29  MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 88

Query: 61  FCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDF+GDD RGPATIDYSSLMQEGEFH LADSTI GLQEKLEEYGDDLQIDGFDVD
Sbjct: 89  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 148

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 180
           YGNEVLTLRLG LGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQ+SQAWIYRR+KANLLRL
Sbjct: 149 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 208

Query: 181 LETELAQLCGEPIDLS 193
           LETEL QLCGEPI+LS
Sbjct: 209 LETELTQLCGEPINLS 224

[Close]

BLAST of Lcy07g012210 vs. NCBI nr
Match: XP_022947402.1 (frataxin, mitochondrial [Cucurbita moschata])

HSP 1 Score: 353.2 bits (905), Expect = 1.4e-93
Identity = 175/196 (89.29%), Postives = 185/196 (94.39%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKLP----SSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRN 60
           MATKLLPLRKLSRILK+P    SSSSSSFRK+SYLLE++RP LDLS NVHQFHPPSFSR+
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLESTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDF+GDD RGPATIDYSSLMQEGEFH LADSTI GLQEKLEEYGDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMQEGEFHRLADSTIHGLQEKLEEYGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 180
           YGNEVLTLRLG LGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQ+SQAWIYRR+KANLLRL
Sbjct: 121 YGNEVLTLRLGYLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQDSQAWIYRRSKANLLRL 180

Query: 181 LETELAQLCGEPIDLS 193
           LETEL QLCGEPI+LS
Sbjct: 181 LETELTQLCGEPINLS 196

[Close]

BLAST of Lcy07g012210 vs. NCBI nr
Match: XP_023533562.1 (frataxin, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 352.8 bits (904), Expect = 1.8e-93
Identity = 174/196 (88.78%), Postives = 184/196 (93.88%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKLP----SSSSSSFRKFSYLLEASRPPLDLSHNVHQFHPPSFSRN 60
           MATKLLPLRKLSRILK+P    SSSSSSFRK+SYLLE +RP LDLS NVHQFHPPSFSR+
Sbjct: 1   MATKLLPLRKLSRILKVPSFLSSSSSSSFRKYSYLLEPTRPLLDLSDNVHQFHPPSFSRS 60

Query: 61  FCSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVD 120
           FCSRPLDF+GDD RGPATIDYSSLM EGEFH LADSTI GLQEKLEE+GDDLQIDGFDVD
Sbjct: 61  FCSRPLDFVGDDSRGPATIDYSSLMHEGEFHRLADSTIHGLQEKLEEFGDDLQIDGFDVD 120

Query: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRL 180
           YGNEVLTLRLGDLGTYVLNKQTPNRQ+WLSSP SGPSRFDWDQ+SQAWIYRRNKANLLRL
Sbjct: 121 YGNEVLTLRLGDLGTYVLNKQTPNRQIWLSSPASGPSRFDWDQDSQAWIYRRNKANLLRL 180

Query: 181 LETELAQLCGEPIDLS 193
           LETELAQLCG+PI+LS
Sbjct: 181 LETELAQLCGKPINLS 196

[Close]

BLAST of Lcy07g012210 vs. NCBI nr
Match: XP_022140770.1 (frataxin, mitochondrial [Momordica charantia])

HSP 1 Score: 349.4 bits (895), Expect = 2.0e-92
Identity = 172/195 (88.21%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 1   MATKLLPLRKLSRILKLPSSSSSS---FRKFSYLLEASRPPLDLSHNVHQFHPPSFSRNF 60
           MATKLLPLRKLSRILK+PSSSS S   FR++SYLLEASRP L +S NVHQFHPPSFSR+F
Sbjct: 1   MATKLLPLRKLSRILKVPSSSSYSSPCFRRYSYLLEASRPLLGISDNVHQFHPPSFSRSF 60

Query: 61  CSRPLDFIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDY 120
           CSRPLDF+ DD RGPA+IDYSSLMQEG+FH LADSTI GLQEKLEEYGDDLQIDGFDVDY
Sbjct: 61  CSRPLDFVDDDSRGPASIDYSSLMQEGDFHRLADSTIHGLQEKLEEYGDDLQIDGFDVDY 120

Query: 121 GNEVLTLRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLL 180
           GNEVLTL+LGDLGTYVLNKQTPNRQ+WLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLL
Sbjct: 121 GNEVLTLKLGDLGTYVLNKQTPNRQIWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLL 180

Query: 181 ETELAQLCGEPIDLS 193
           ETELA+LCGEPI LS
Sbjct: 181 ETELAELCGEPIGLS 195

[Close]

BLAST of Lcy07g012210 vs. TAIR 10
Match: AT4G03240.1 (frataxin homolog )

HSP 1 Score: 205.7 bits (522), Expect = 3.4e-53
Identity = 109/189 (57.67%), Postives = 135/189 (71.43%), Query Frame = 0


Query: 8   LRKLSRILKLPSS--SSSSFRKFSYLLEASRPPLDLSHNVHQ--FHPPSFSRNFCSRPLD 67
           LRKL R LKL  +   S+  R  S L++ S  PLD    +     H    +R+F S    
Sbjct: 9   LRKLPRFLKLSPTLLRSNGVRVSSNLIQDSIEPLDSFWRIGSRIRHDSLTTRSFSS---- 68

Query: 68  FIGDDPRGPATIDYSSLMQEGEFHNLADSTIQGLQEKLEEYGDDLQIDGFDVDYGNEVLT 127
                 +GPA++DYSS++QE EFH LA+ TI  L EK+E+YGD++QIDGFD+DYGNEVLT
Sbjct: 69  ------QGPASVDYSSVLQEEEFHKLANFTINHLLEKIEDYGDNVQIDGFDIDYGNEVLT 128

Query: 128 LRLGDLGTYVLNKQTPNRQLWLSSPVSGPSRFDWDQNSQAWIYRRNKANLLRLLETELAQ 187
           L+LG LGTYVLNKQTPNRQ+W+SSPVSGPSRFDWD+++ AWIYRR +A L +LLE EL  
Sbjct: 129 LKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDANAWIYRRTEAKLHKLLEEELEN 187

Query: 188 LCGEPIDLS 193
           LCGEPI LS
Sbjct: 189 LCGEPIQLS 187

The following BLAST results are available for this feature:

BLAST of Lcy07g012210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZR07	4.7e-52	57.67	Frataxin, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=FH PE=1 SV=2	[more]
O35943	1.8e-22	43.20	Frataxin, mitochondrial OS=Mus musculus OX=10090 GN=Fxn PE=1 SV=1	[more]
Q05B87	1.1e-21	42.40	Frataxin, mitochondrial OS=Bos taurus OX=9913 GN=FXN PE=2 SV=1	[more]
Q16595	3.3e-21	41.60	Frataxin, mitochondrial OS=Homo sapiens OX=9606 GN=FXN PE=1 SV=2	[more]
O74831	6.3e-20	36.21	Frataxin homolog, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC ...	[more]

BLAST of Lcy07g012210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1I2E7	2.8e-95	90.31	Ferroxidase OS=Cucurbita maxima OX=3661 GN=LOC111469879 PE=3 SV=1	[more]
A0A6J1G6C8	6.8e-94	89.29	Ferroxidase OS=Cucurbita moschata OX=3662 GN=LOC111451278 PE=3 SV=1	[more]
A0A6J1CG34	9.8e-93	88.21	Ferroxidase OS=Momordica charantia OX=3673 GN=LOC111011350 PE=3 SV=1	[more]
A0A1S3BJ48	1.3e-89	86.46	Ferroxidase OS=Cucumis melo OX=3656 GN=LOC103490464 PE=3 SV=1	[more]
A0A0A0KAC6	1.1e-88	86.24	Ferroxidase OS=Cucumis sativus OX=3659 GN=Csa_6G121430 PE=3 SV=1	[more]

BLAST of Lcy07g012210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022971111.1	5.7e-95	90.31	frataxin, mitochondrial [Cucurbita maxima]	[more]
KAG6604827.1	1.4e-93	89.29	Frataxin, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022947402.1	1.4e-93	89.29	frataxin, mitochondrial [Cucurbita moschata]	[more]
XP_023533562.1	1.8e-93	88.78	frataxin, mitochondrial isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022140770.1	2.0e-92	88.21	frataxin, mitochondrial [Momordica charantia]	[more]

BLAST of Lcy07g012210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03240.1	3.4e-53	57.67	frataxin homolog	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002908	Frataxin/CyaY	PRINTS	PR00904	FRATAXIN	coord: 81..99 score: 31.58 coord: 119..134 score: 43.75 coord: 134..149 score: 75.0
IPR002908	Frataxin/CyaY	SMART	SM01219	Frataxin_Cyay_2	coord: 81..192 e-value: 1.8E-48 score: 177.0
IPR002908	Frataxin/CyaY	PFAM	PF01491	Frataxin_Cyay	coord: 81..188 e-value: 1.7E-36 score: 124.6
IPR002908	Frataxin/CyaY	TIGRFAM	TIGR03421	TIGR03421	coord: 83..190 e-value: 7.9E-24 score: 81.6
IPR002908	Frataxin/CyaY	PANTHER	PTHR16821	FRATAXIN	coord: 25..191
IPR002908	Frataxin/CyaY	PROSITE	PS50810	FRATAXIN_2	coord: 81..189 score: 29.229841
IPR017789	Frataxin	TIGRFAM	TIGR03422	TIGR03422	coord: 85..182 e-value: 4.4E-35 score: 117.9
IPR036524	Frataxin/CyaY superfamily	GENE3D	3.30.920.10	Frataxin/CyaY	coord: 73..192 e-value: 1.9E-41 score: 142.8
IPR036524	Frataxin/CyaY superfamily	SUPERFAMILY	55387	Frataxin/Nqo15-like	coord: 72..189
IPR020895	Frataxin conserved site	PROSITE	PS01344	FRATAXIN_1	coord: 133..147
None	No IPR available	CDD	cd00503	Frataxin	coord: 81..191 e-value: 3.9505E-41 score: 132.775

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g012210.1	Lcy07g012210.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009060	aerobic respiration
biological_process	GO:0006879	cellular iron ion homeostasis
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0006783	heme biosynthetic process
biological_process	GO:0006811	ion transport
biological_process	GO:0018283	iron incorporation into metallo-sulfur cluster
biological_process	GO:1903329	regulation of iron-sulfur cluster assembly
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0016226	iron-sulfur cluster assembly
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0008199	ferric iron binding
molecular_function	GO:0008198	ferrous iron binding
molecular_function	GO:0004322	ferroxidase activity
molecular_function	GO:0034986	iron chaperone activity