Lcy07g011820 (gene) Sponge gourd (P93075) v1

Overview
NameLcy07g011820
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr07: 40953102 .. 40953467 (+)
RNA-Seq ExpressionLcy07g011820
SyntenyLcy07g011820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTACCCAGTTGGAAACGATGCTAATGATCTTCCCTCATATGAAGGTACCACTGTCGTTACTCGTTTCTTTGAATCACTGTAAATTTCCGTTTCAGAAGTAAGTTAATGTCGAATTTGTAATTCTCTTATATGATATCTTGTTTCAGTTTAATTCAGTGATTGGAGTGTGGTTCGATGGTTCTCGAGGAAAGAAACTTTGCGGTTCAGTGATTCTTCGCTTTGACAAGCATATGAGAAAGGGGAGAGAAATTTTGTGTTTGTTTGCCATGAACTTGCAGTTGTTTAGTCTGTTCTGTAACAGTGGTGGTTTGGTGGACGTTGTCGGAGAACTGCTCGGAGTTGTAAGCATCGATCAACAATGA

mRNA sequence

ATGCTTACCCAGTTGGAAACGATGCTAATGATCTTCCCTCATATGAAGTTTAATTCAGTGATTGGAGTGTGGTTCGATGGTTCTCGAGGAAAGAAACTTTGCGGTTCAGTGATTCTTCGCTTTGACAAGCATATGAGAAAGGGGAGAGAAATTTTGTGTTTGTTTGCCATGAACTTGCAGTTGTTTAGTCTGTTCTGTAACAGTGGTGGTTTGGTGGACGTTGTCGGAGAACTGCTCGGAGTTGTAAGCATCGATCAACAATGA

Coding sequence (CDS)

ATGCTTACCCAGTTGGAAACGATGCTAATGATCTTCCCTCATATGAAGTTTAATTCAGTGATTGGAGTGTGGTTCGATGGTTCTCGAGGAAAGAAACTTTGCGGTTCAGTGATTCTTCGCTTTGACAAGCATATGAGAAAGGGGAGAGAAATTTTGTGTTTGTTTGCCATGAACTTGCAGTTGTTTAGTCTGTTCTGTAACAGTGGTGGTTTGGTGGACGTTGTCGGAGAACTGCTCGGAGTTGTAAGCATCGATCAACAATGA

Protein sequence

MLTQLETMLMIFPHMKFNSVIGVWFDGSRGKKLCGSVILRFDKHMRKGREILCLFAMNLQLFSLFCNSGGLVDVVGELLGVVSIDQQ
Homology
[Close]
BLAST of Lcy07g011820 vs. NCBI nr
Match: KAG7034970.1 (hypothetical protein SDJN02_01763, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 129.8 bits (325), Expect = 1.1e-26
Identity = 64/84 (76.19%), Postives = 72/84 (85.71%), Query Frame = 0 

Query: 2   LTQLETMLMIFPHMKFNSVIGVWFDGSRGKKLCGSVILRFDKHMRKGREILCLFAMNLQL 61
           + QL+TM M+ P MKF+SV GVWFDGSRGKK CGSVIL FD+ MRKGREILCLF++NL+L
Sbjct: 24  ILQLKTMQMVLPPMKFDSVNGVWFDGSRGKKPCGSVILCFDEQMRKGREILCLFSVNLRL 83

Query: 62  FSLFCNSGGLVDVVGELLGVVSID 86
           FSLFCNSG  VD V ELLGVVSID
Sbjct: 84  FSLFCNSGDSVDFVDELLGVVSID 107

[Close]
BLAST of Lcy07g011820 vs. NCBI nr
Match: KAG7010730.1 (hypothetical protein SDJN02_27526, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 59.7 bits (143), Expect = 1.5e-05
Identity = 31/48 (64.58%), Postives = 35/48 (72.92%), Query Frame = 0 

Query: 1   MLTQLETMLMIFP---HMKFNSVIGVWFDGSRGKKLCGSVILRFDKHM 46
           +LTQLETM M+ P      FNSV  VWF+GSRGKKL GS ILRFDK +
Sbjct: 90  ILTQLETMRMVLPLSLRDSFNSVTEVWFNGSRGKKLYGSAILRFDKEI 137

The following BLAST results are available for this feature:
BLAST of Lcy07g011820 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy07g011820 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy07g011820 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7034970.11.1e-2676.19hypothetical protein SDJN02_01763, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG7010730.11.5e-0564.58hypothetical protein SDJN02_27526, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Lcy07g011820 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy07g011820.1Lcy07g011820.1mRNA