Lcy07g002160 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAACTAATCAGAACTCTATACTCAGAGGTTGCGGCAGTAACTCTAGAGGAGCCTTGGTGGTTCTTGAAGGTTTGAACCGTTGTGGGAAGACTACACAGTCCAGTAGATTAGTCCAGTACTTAGAAGGACTTGGGCATTCTGCTGAACTATGGCGGTTTCCTGACAGAACTACAAGTGTTGGATAGATGATATCTTCCTATCTTTCAAACAAATCACAGCTGGATGACCACACAATACATCTTCTTTTCAGTGCTAACCGATGGGAGAAGAGGTTTTTCAATTTTTATATTGGGTTTTTGTATGGAACTCAATCAATTGTATTGTTGTTCAGTATTTGCTTTTACAAGTACTTGGGAGATCAGCAGCAGTGCTAAAATTGATGCTATTACTATGGTAAGCTTCATTTCAATTCTGATTCTTCTTCTGTCACAATCTTGTATGCATTTTGATGTTTTTCTGTTGTGTGTATAAAAGGGCATATATAGACTGGTTTGCTTTGACCTTGCCTTGAAGTTTGTAATTATAATGTTGAGTTCTATAGCATTTGTGCTTGACTTCTTGAGTTTCAATTTCAAAGAGCAGAAGTCTGATAGCTTAAAGGATTTAAATGCAGCACAGTGAATTAATAGACACAACATCCGATGCTAGAAGGGTGGGTGGGAAGCAAGGACTTGCTACCTTCAAATTTGTGACTTCCAATGCCCATTTAT ATGGGAACTAATCAGAACTCTATACTCAGAGGTTGCGGCAGTAACTCTAGAGGAGCCTTGGTGGTTCTTGAAGGTTTGAACCGTTGTGGGAAGACTACACAGTCCAGTAGATTAGTCCAGTACTTAGAAGGACTTGGGCATTCTGCTGAACTATGGCGGTTTCCTGACAGAACTACAATATTTGCTTTTACAAGTACTTGGGAGATCAGCAGCAGTGCTAAAATTGATGCTATTACTATGCACAGTGAATTAATAGACACAACATCCGATGCTAGAAGGGTGGGTGGGAAGCAAGGACTTGCTACCTTCAAATTTGTGACTTCCAATGCCCATTTAT ATGGGAACTAATCAGAACTCTATACTCAGAGGTTGCGGCAGTAACTCTAGAGGAGCCTTGGTGGTTCTTGAAGGTTTGAACCGTTGTGGGAAGACTACACAGTCCAGTAGATTAGTCCAGTACTTAGAAGGACTTGGGCATTCTGCTGAACTATGGCGGTTTCCTGACAGAACTACAATATTTGCTTTTACAAGTACTTGGGAGATCAGCAGCAGTGCTAAAATTGATGCTATTACTATGCACAGTGAATTAATAGACACAACATCCGATGCTAGAAGGGTGGGTGGGAAGCAAGGACTTGCTACCTTCAAATTTGTGACTTCCAATGCCCATTTAT MGTNQNSILRGCGSNSRGALVVLEGLNRCGKTTQSSRLVQYLEGLGHSAELWRFPDRTTIFAFTSTWEISSSAKIDAITMHSELIDTTSDARRVGGKQGLATFKFVTSNAHL Homology
BLAST of Lcy07g002160 vs. ExPASy Swiss-Prot
Match: Q0WW55 (Thymidylate kinase OS=Arabidopsis thaliana OX=3702 GN=ZEU1 PE=2 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 4.8e-12 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 0
BLAST of Lcy07g002160 vs. ExPASy Swiss-Prot
Match: P23919 (Thymidylate kinase OS=Homo sapiens OX=9606 GN=DTYMK PE=1 SV=4) HSP 1 Score: 58.2 bits (139), Expect = 7.1e-08 Identity = 27/43 (62.79%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of Lcy07g002160 vs. ExPASy Swiss-Prot
Match: P97930 (Thymidylate kinase OS=Mus musculus OX=10090 GN=Dtymk PE=1 SV=2) HSP 1 Score: 55.8 bits (133), Expect = 3.5e-07 Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Lcy07g002160 vs. ExPASy Swiss-Prot
Match: P36590 (Thymidylate kinase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=tmp1 PE=2 SV=2) HSP 1 Score: 49.7 bits (117), Expect = 2.5e-05 Identity = 24/44 (54.55%), Postives = 31/44 (70.45%), Query Frame = 0
BLAST of Lcy07g002160 vs. ExPASy TrEMBL
Match: A0A6J1KDZ8 (dTMP kinase OS=Cucurbita maxima OX=3661 GN=LOC111492984 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.5e-24 Identity = 60/81 (74.07%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lcy07g002160 vs. ExPASy TrEMBL
Match: A0A6J1KGD6 (dTMP kinase OS=Cucurbita maxima OX=3661 GN=LOC111492984 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.5e-24 Identity = 60/81 (74.07%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lcy07g002160 vs. ExPASy TrEMBL
Match: A0A6J1G9Z9 (dTMP kinase OS=Cucurbita moschata OX=3662 GN=LOC111452153 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.5e-24 Identity = 60/81 (74.07%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lcy07g002160 vs. ExPASy TrEMBL
Match: A0A6J1G9C4 (dTMP kinase OS=Cucurbita moschata OX=3662 GN=LOC111452153 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.5e-24 Identity = 60/81 (74.07%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lcy07g002160 vs. ExPASy TrEMBL
Match: A0A6J1DF06 (dTMP kinase OS=Momordica charantia OX=3673 GN=LOC111019882 PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 7.4e-24 Identity = 59/81 (72.84%), Postives = 68/81 (83.95%), Query Frame = 0
BLAST of Lcy07g002160 vs. NCBI nr
Match: KAG6606822.1 (Thymidylate kinase, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 122.1 bits (305), Expect = 3.1e-24 Identity = 60/81 (74.07%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lcy07g002160 vs. NCBI nr
Match: XP_022998308.1 (thymidylate kinase isoform X1 [Cucurbita maxima]) HSP 1 Score: 122.1 bits (305), Expect = 3.1e-24 Identity = 60/81 (74.07%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lcy07g002160 vs. NCBI nr
Match: XP_023523991.1 (thymidylate kinase isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 122.1 bits (305), Expect = 3.1e-24 Identity = 60/81 (74.07%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lcy07g002160 vs. NCBI nr
Match: XP_022998309.1 (thymidylate kinase isoform X2 [Cucurbita maxima]) HSP 1 Score: 122.1 bits (305), Expect = 3.1e-24 Identity = 60/81 (74.07%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lcy07g002160 vs. NCBI nr
Match: XP_022948491.1 (thymidylate kinase isoform X2 [Cucurbita moschata]) HSP 1 Score: 122.1 bits (305), Expect = 3.1e-24 Identity = 60/81 (74.07%), Postives = 69/81 (85.19%), Query Frame = 0
BLAST of Lcy07g002160 vs. TAIR 10
Match: AT5G59440.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 72.0 bits (175), Expect = 3.4e-13 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 0
BLAST of Lcy07g002160 vs. TAIR 10
Match: AT5G59440.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 72.0 bits (175), Expect = 3.4e-13 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 0
BLAST of Lcy07g002160 vs. TAIR 10
Match: AT5G59440.3 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 72.0 bits (175), Expect = 3.4e-13 Identity = 33/65 (50.77%), Postives = 47/65 (72.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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