Lcy07g001080 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy07g001080
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Retrotransposon protein
Location	Chr07: 2833365 .. 2834353 (+)
RNA-Seq Expression	Lcy07g001080
Synteny	Lcy07g001080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGGAGCAGACAAACAACCAAAACATATATGGACGAGGTTGGAGGAGGCAAAATTGGTTGAAAGCCTCGTGGAGCTTGTACATGAAGGTGGGTGGCGAGGTGATAATGGAACGTTCAGACCCGGCTACCTTGCACGACTGAAGCGTATGCTGAAAGGAAAAATCCCGACATGCACGATCGAATCAACATCTACAATTGACTCCAAGGTACGGTCGTTGAAAAGGCAGTACAGTGCGATTAACGATATGTTGGGTCCCGGATGCAGTGGATTCGGGTGGAACGAAGAGTATAAGTGCATTGTGGCGGAGAAAGAAGTCTTCGATGAGTGGGTGAAGGTACGATCATTATTCATTAATTGGTTTAATGCCTGTATATTCCAACGTTCCATAAATCCACTGTCGTATATGCAGTCCCACTTAGTTGCAAAGGGTCTACTAAACAAGCCATTTCCTCATTACGAGGAACTCGCCTTCGTGTTCGGCAAGGATCGGGGTGCGATGTACCAGCGGAACAAGCTGCAGAAAGCCCCCCAGTGGACGCGGAGGGGGATTCCAACTTCCAGGGGACACATGATTATTATGTCCCCATCCCTCCAGTAGAAAATTTGGCCACGGACGTCGAGTTTGAGGACGTCCCCATAACGCCCACGAGCCGATCGAGCACAGCGGGTTCCTCGCAGGGTCGGAAGAGGAGTAGAGCATCATATGAAGCAAAATTCCTTGAAATAATGAGGCAGGTAGTCAGCATACAGGAGACACAATTCACAAAAATCGCTGACTGGCCAGACACACAAGACACCAGGGAGTTCAAGAGGCGAGAAACAGTTGGGGAGATGCTCATGGCTCAGTCGGAGCTAACAGATCGCGAGAGAGTCTCCCTTATGCGTATCCTCTTCGCCGACACAAAGATGACCAATATGATGCTGTCCGTCCCCCCGACCCTTAGGCTCCAATTCCTCCGCGATCTTCTTGAAGAACGCCGCTGA

mRNA sequence

ATGGCAGGAGCAGACAAACAACCAAAACATATATGGACGAGGTTGGAGGAGGCAAAATTGGTTGAAAGCCTCGTGGAGCTTGTACATGAAGGTGGGTGGCGAGGTGATAATGGAACGTTCAGACCCGGCTACCTTGCACGACTGAAGCGTATGCTGAAAGGAAAAATCCCGACATGCACGATCGAATCAACATCTACAATTGACTCCAAGGTACGGTCGTTGAAAAGGCAGTACAGTGCGATTAACGATATGTTGGGTCCCGGATGCAGTGGATTCGGGTGGAACGAAGAGTATAAGTGCATTGTGGCGGAGAAAGAAGTCTTCGATGAGTGGGTGAAGGTACGATCATTATTCATTAATTGGTTTAATGCCTGTATATTCCAACTCCCACTTAGTTGCAAAGGGTCTACTAAACAAGCCATTTCCTCATTACGAGGAACTCGCCTTCGTGTTCGGCAAGGATCGGGGTGCGATGTACCAGCGGAACAAGCTGCAGAAAGCCCCCCAGTGGACGCGGAGGGGGATTCCAACTTCCAGGGGACACATGATTATTATGTCCCCATCCCTCCAGTAGAAAATTTGGCCACGGACGTCGAGTTTGAGGACGTCCCCATAACGCCCACGAGCCGATCGAGCACAGCGGGTTCCTCGCAGGGTCGGAAGAGGAGTAGAGCATCATATGAAGCAAAATTCCTTGAAATAATGAGGCAGGTAGTCAGCATACAGGAGACACAATTCACAAAAATCGCTGACTGGCCAGACACACAAGACACCAGGGAGTTCAAGAGGCGAGAAACAGTTGGGGAGATGCTCATGGCTCAGTCGGAGCTAACAGATCGCGAGAGAGTCTCCCTTATGCGTATCCTCTTCGCCGACACAAAGATGACCAATATGATGCTGTCCGTCCCCCCGACCCTTAGGCTCCAATTCCTCCGCGATCTTCTTGAAGAACGCCGCTGA

Coding sequence (CDS)

ATGGCAGGAGCAGACAAACAACCAAAACATATATGGACGAGGTTGGAGGAGGCAAAATTGGTTGAAAGCCTCGTGGAGCTTGTACATGAAGGTGGGTGGCGAGGTGATAATGGAACGTTCAGACCCGGCTACCTTGCACGACTGAAGCGTATGCTGAAAGGAAAAATCCCGACATGCACGATCGAATCAACATCTACAATTGACTCCAAGGTACGGTCGTTGAAAAGGCAGTACAGTGCGATTAACGATATGTTGGGTCCCGGATGCAGTGGATTCGGGTGGAACGAAGAGTATAAGTGCATTGTGGCGGAGAAAGAAGTCTTCGATGAGTGGGTGAAGGTACGATCATTATTCATTAATTGGTTTAATGCCTGTATATTCCAACTCCCACTTAGTTGCAAAGGGTCTACTAAACAAGCCATTTCCTCATTACGAGGAACTCGCCTTCGTGTTCGGCAAGGATCGGGGTGCGATGTACCAGCGGAACAAGCTGCAGAAAGCCCCCCAGTGGACGCGGAGGGGGATTCCAACTTCCAGGGGACACATGATTATTATGTCCCCATCCCTCCAGTAGAAAATTTGGCCACGGACGTCGAGTTTGAGGACGTCCCCATAACGCCCACGAGCCGATCGAGCACAGCGGGTTCCTCGCAGGGTCGGAAGAGGAGTAGAGCATCATATGAAGCAAAATTCCTTGAAATAATGAGGCAGGTAGTCAGCATACAGGAGACACAATTCACAAAAATCGCTGACTGGCCAGACACACAAGACACCAGGGAGTTCAAGAGGCGAGAAACAGTTGGGGAGATGCTCATGGCTCAGTCGGAGCTAACAGATCGCGAGAGAGTCTCCCTTATGCGTATCCTCTTCGCCGACACAAAGATGACCAATATGATGCTGTCCGTCCCCCCGACCCTTAGGCTCCAATTCCTCCGCGATCTTCTTGAAGAACGCCGCTGA

Protein sequence

MAGADKQPKHIWTRLEEAKLVESLVELVHEGGWRGDNGTFRPGYLARLKRMLKGKIPTCTIESTSTIDSKVRSLKRQYSAINDMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKVRSLFINWFNACIFQLPLSCKGSTKQAISSLRGTRLRVRQGSGCDVPAEQAAESPPVDAEGDSNFQGTHDYYVPIPPVENLATDVEFEDVPITPTSRSSTAGSSQGRKRSRASYEAKFLEIMRQVVSIQETQFTKIADWPDTQDTREFKRRETVGEMLMAQSELTDRERVSLMRILFADTKMTNMMLSVPPTLRLQFLRDLLEERR

Homology

[Close]

BLAST of Lcy07g001080 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-43
Identity = 113/316 (35.76%), Postives = 159/316 (50.32%), Query Frame = 0


Query: 1   MAGADKQPKHIWTRLEEAKLVESLVELVHEGGWRGDNGTFRPGYLARLKRMLKGKIPTCT 60
           MA   + PKH WT+ EE K VE LVELV  GGWR DNGTF+PGYLA+L+RM+  K+P   
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IESTSTIDSKVRSLKRQYSAINDMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKVRSLFIN 120
           I+ +STID  V+SLK+ Y AI +M GP CSGFGWNEE++CI+AE+++FD W+K       
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 WFNACIFQLPLSCKGSTKQAISSLRGTRLRVRQGSGCDVPAEQAAESPPVDAEGDSNFQG 180
             +      P     S         G R       G +V +    ++ P+    D +   
Sbjct: 121 LLHK---SFPYYDDLSYVFGKDRATGARSETFPNVGSNV-SNMFNDTIPLGDSHDEDIPT 180

Query: 181 THDYYVPIPPVENLATDVEFEDVPITPTSRSSTAGSSQGRKRSRASYEAKFLEIMRQVVS 240
            +   V + P E            I     S     S   KR R S   + +E++R V+ 
Sbjct: 181 MYSQGVHMSPDEMFG---------IRAGQASERRNCSSVSKRKRGSERYETVEVIRSVME 240

Query: 241 IQETQFTKIADWPDTQDTREFKRRETVGEMLMAQSELTDRERVSLMRILFADTKMTNMML 300
               Q   IADWP  +   E + R  V + L    +L  ++R  LM+ILF   +     L
Sbjct: 241 FGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFL 300

Query: 301 SVPPTLRLQFLRDLLE 317
           S+P  L+L++   LL+
Sbjct: 301 SIPTELKLEYCNILLQ 303

[Close]

BLAST of Lcy07g001080 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-43
Identity = 113/316 (35.76%), Postives = 159/316 (50.32%), Query Frame = 0


Query: 1   MAGADKQPKHIWTRLEEAKLVESLVELVHEGGWRGDNGTFRPGYLARLKRMLKGKIPTCT 60
           MA   + PKH WT+ EE K VE LVELV  GGWR DNGTF+PGYLA+L+RM+  K+P   
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IESTSTIDSKVRSLKRQYSAINDMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKVRSLFIN 120
           I+ +STID  V+SLK+ Y AI +M GP CSGFGWNEE++CI+AE+++FD W+K       
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 WFNACIFQLPLSCKGSTKQAISSLRGTRLRVRQGSGCDVPAEQAAESPPVDAEGDSNFQG 180
             +      P     S         G R       G +V +    ++ P+    D +   
Sbjct: 121 LLHK---SFPYYDDLSYVFGKDRATGARSETFPNVGSNV-SNMFNDTIPLGDSHDEDIPT 180

Query: 181 THDYYVPIPPVENLATDVEFEDVPITPTSRSSTAGSSQGRKRSRASYEAKFLEIMRQVVS 240
            +   V + P E            I     S     S   KR R S   + +E++R V+ 
Sbjct: 181 MYSQGVHMSPDEMFG---------IRAGQASERRNCSSVSKRKRGSERYETVEVIRSVME 240

Query: 241 IQETQFTKIADWPDTQDTREFKRRETVGEMLMAQSELTDRERVSLMRILFADTKMTNMML 300
               Q   IADWP  +   E + R  V + L    +L  ++R  LM+ILF   +     L
Sbjct: 241 FGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFL 300

Query: 301 SVPPTLRLQFLRDLLE 317
           S+P  L+L++   LL+
Sbjct: 301 SIPTELKLEYCNILLQ 303

[Close]

BLAST of Lcy07g001080 vs. ExPASy TrEMBL
Match: A0A5A7TN44 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G003610 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.7e-41
Identity = 113/318 (35.53%), Postives = 158/318 (49.69%), Query Frame = 0


Query: 1   MAGADKQPKHIWTRLEEAKLVESLVELVHEGGWRGDNGTFRPGYLARLKRMLKGKIPTCT 60
           M+ +++ P+H+WTR EE  LVE L+ELV  GGW+ DNGTFRPGYLA+L RM+  K+P C 
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  IESTSTIDSKVRSLKRQYSAINDMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKVRSLFIN 120
           + +T+ ID ++++LKR + AI +M GP CSGFGWN+E KCIVAEKE+FD WV+       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 WFNACIFQLPLSCKGSTKQAISSLRGTRLRVRQGSGCDVPAEQAAESPPVDAEGDSNFQG 180
             N      P              R T      G   +  A+  +  P    +      G
Sbjct: 121 LLNK-----PFPYYDELTYVFGRDRAT------GRFAETFADVGSNEPGGGYDRFDMGDG 180

Query: 181 THDYYVPIPPVENLATDVEFEDVPITPTSRSSTAGS-SQGRKRSRASYEAKFLEIMRQVV 240
             D+    PPV +   D+  +DV  +  SR+S   + S G KR R S     LE +   +
Sbjct: 181 NEDF----PPVYSQGVDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHLAL 240

Query: 241 SIQETQFTKIADWPDTQDTREFKRRETVGEMLMAQSELTDRERVSLMRILFADTKMTNMM 300
                Q  +IA+WP      +   R     +L    ELT  +R  L R LF+        
Sbjct: 241 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLFSRMDDLRGF 300

Query: 301 LSVPPTLRLQFLRDLLEE 318
           + +P   R  F R LL +
Sbjct: 301 VLMPEDEREGFCRVLLRD 303

[Close]

BLAST of Lcy07g001080 vs. ExPASy TrEMBL
Match: A0A5A7UME4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00290 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 6.5e-41
Identity = 121/322 (37.58%), Postives = 168/322 (52.17%), Query Frame = 0


Query: 1   MAGADKQPKHIWTRLEEAKLVESLVELVHEGGWRGDNGTFRPGYLARLKRMLKGKIPTCT 60
           M  + + PKH WT+ EEA LVE LVELV+ GGWR DNGTFRPGYL +L RM+  KIP   
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 61  IESTSTIDSKVRSLKRQYSAINDMLGPGCSGFGWNEEYKCIVAEKEVFDEW--VKVRSLF 120
           I + STIDS+++ +KR + A+ +M GP CSGFGWN+E KCIVAEKEVFD+W     + L 
Sbjct: 61  IHA-STIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLL 120

Query: 121 INWFNACIFQLPLSCKGSTKQAISSLRGTRLRVRQGSGCDVPAEQAAESPPVDAEGDSNF 180
              F   +    LS      +A     G R       G + P    AE+   DA  D++F
Sbjct: 121 NKSF---VHYDELSYVFGKDRA----TGGRAESFADIGSNDPPGYDAEA--ADAMPDTDF 180

Query: 181 QGTHDYYVPIPPVENLATDVEFEDVPITPTSR-SSTAGSSQGRKRSRASYEAKFLEIMRQ 240
                     PP+ +   ++  +D+  T T+R S     S G KR R  +     +I+R 
Sbjct: 181 ----------PPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRT 240

Query: 241 VVSIQETQFTKIADWPDTQDTREFKRRETVGEMLMAQSELTDRERVSLMRILFADTKMTN 300
            +     Q  +IA+WP  Q     + R+ +   L A  ELT  +R  LMRIL  +     
Sbjct: 241 AIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMK 300

Query: 301 MMLSVPPTLRLQFLRDLLEERR 320
             L VP  ++  +   +L+E +
Sbjct: 301 AFLEVPDHMKYPYCSLILQENQ 302

[Close]

BLAST of Lcy07g001080 vs. ExPASy TrEMBL
Match: A0A5A7TRV1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold153G00290 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 8.5e-41
Identity = 112/318 (35.22%), Postives = 157/318 (49.37%), Query Frame = 0


Query: 1   MAGADKQPKHIWTRLEEAKLVESLVELVHEGGWRGDNGTFRPGYLARLKRMLKGKIPTCT 60
           M+ +++ P+H+WTR EE  LVE L+ELV  GGW+ DNGTFRPGYLA+L RM+  K+P C 
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  IESTSTIDSKVRSLKRQYSAINDMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKVRSLFIN 120
           + +T+ ID ++++LKR + AI +M GP CSGFGWN+E KCIVAEKE+FD WV+       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 WFNACIFQLPLSCKGSTKQAISSLRGTRLRVRQGSGCDVPAEQAAESPPVDAEGDSNFQG 180
             N      P              R T      G   +  A+  +  P    +      G
Sbjct: 121 LLNK-----PFPYYDELTYVFGRDRAT------GRFAETFADVGSNEPGGGYDRFDMGDG 180

Query: 181 THDYYVPIPPVENLATDVEFEDVPITPTSRSSTAGS-SQGRKRSRASYEAKFLEIMRQVV 240
             D+    PPV +   D+  +DV  +  SR+S   + S G KR R S     LE +   +
Sbjct: 181 NEDF----PPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLAL 240

Query: 241 SIQETQFTKIADWPDTQDTREFKRRETVGEMLMAQSELTDRERVSLMRILFADTKMTNMM 300
                Q  +IA+WP      +   R     +L    ELT  +R  L R L +        
Sbjct: 241 DQTNEQLREIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGF 300

Query: 301 LSVPPTLRLQFLRDLLEE 318
           + +P   R  F R LL +
Sbjct: 301 VLMPEDEREGFCRVLLRD 303

[Close]

BLAST of Lcy07g001080 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 187.2 bits (474), Expect = 2.2e-43
Identity = 113/316 (35.76%), Postives = 159/316 (50.32%), Query Frame = 0


Query: 1   MAGADKQPKHIWTRLEEAKLVESLVELVHEGGWRGDNGTFRPGYLARLKRMLKGKIPTCT 60
           MA   + PKH WT+ EE K VE LVELV  GGWR DNGTF+PGYLA+L+RM+  K+P   
Sbjct: 1   MASLSRAPKHTWTKEEEEKFVECLVELVSSGGWRSDNGTFQPGYLAQLQRMMAEKLPGTN 60

Query: 61  IESTSTIDSKVRSLKRQYSAINDMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKVRSLFIN 120
           I+ +STID  V+SLK+ Y AI +M GP CSGFGWNEE++CI+AE+++FD W+K       
Sbjct: 61  IQESSTIDCHVKSLKKTYHAIAEMRGPSCSGFGWNEEFQCIIAERDLFDSWIKSHPAAKG 120

Query: 121 WFNACIFQLPLSCKGSTKQAISSLRGTRLRVRQGSGCDVPAEQAAESPPVDAEGDSNFQG 180
             +      P     S         G R       G +V +    ++ P+    D +   
Sbjct: 121 LLHK---SFPYYDDLSYVFGKDRATGARSETFPNVGSNV-SNMFNDTIPLGDSHDEDIPT 180

Query: 181 THDYYVPIPPVENLATDVEFEDVPITPTSRSSTAGSSQGRKRSRASYEAKFLEIMRQVVS 240
            +   V + P E            I     S     S   KR R S   + +E++R V+ 
Sbjct: 181 MYSQGVHMSPDEMFG---------IRAGQASERRNCSSVSKRKRGSERYETVEVIRSVME 240

Query: 241 IQETQFTKIADWPDTQDTREFKRRETVGEMLMAQSELTDRERVSLMRILFADTKMTNMML 300
               Q   IADWP  +   E + R  V + L    +L  ++R  LM+ILF   +     L
Sbjct: 241 FGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQDRAKLMQILFRSLEAIEGFL 300

Query: 301 SVPPTLRLQFLRDLLE 317
           S+P  L+L++   LL+
Sbjct: 301 SIPTELKLEYCNILLQ 303

[Close]

BLAST of Lcy07g001080 vs. NCBI nr
Match: KAA0044610.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 179.9 bits (455), Expect = 3.5e-41
Identity = 113/318 (35.53%), Postives = 158/318 (49.69%), Query Frame = 0


Query: 1   MAGADKQPKHIWTRLEEAKLVESLVELVHEGGWRGDNGTFRPGYLARLKRMLKGKIPTCT 60
           M+ +++ P+H+WTR EE  LVE L+ELV  GGW+ DNGTFRPGYLA+L RM+  K+P C 
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  IESTSTIDSKVRSLKRQYSAINDMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKVRSLFIN 120
           + +T+ ID ++++LKR + AI +M GP CSGFGWN+E KCIVAEKE+FD WV+       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 WFNACIFQLPLSCKGSTKQAISSLRGTRLRVRQGSGCDVPAEQAAESPPVDAEGDSNFQG 180
             N      P              R T      G   +  A+  +  P    +      G
Sbjct: 121 LLNK-----PFPYYDELTYVFGRDRAT------GRFAETFADVGSNEPGGGYDRFDMGDG 180

Query: 181 THDYYVPIPPVENLATDVEFEDVPITPTSRSSTAGS-SQGRKRSRASYEAKFLEIMRQVV 240
             D+    PPV +   D+  +DV  +  SR+S   + S G KR R S     LE +   +
Sbjct: 181 NEDF----PPVYSQGVDISQDDVRASRPSRASDGRTGSSGSKRKRGSQRDFELEAIHLAL 240

Query: 241 SIQETQFTKIADWPDTQDTREFKRRETVGEMLMAQSELTDRERVSLMRILFADTKMTNMM 300
                Q  +IA+WP      +   R     +L    ELT  +R  L R LF+        
Sbjct: 241 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLFSRMDDLRGF 300

Query: 301 LSVPPTLRLQFLRDLLEE 318
           + +P   R  F R LL +
Sbjct: 301 VLMPEDEREGFCRVLLRD 303

[Close]

BLAST of Lcy07g001080 vs. NCBI nr
Match: KAA0057083.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK09001.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-40
Identity = 121/322 (37.58%), Postives = 168/322 (52.17%), Query Frame = 0


Query: 1   MAGADKQPKHIWTRLEEAKLVESLVELVHEGGWRGDNGTFRPGYLARLKRMLKGKIPTCT 60
           M  + + PKH WT+ EEA LVE LVELV+ GGWR DNGTFRPGYL +L RM+  KIP   
Sbjct: 1   MTSSSRLPKHTWTKEEEAGLVECLVELVNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSN 60

Query: 61  IESTSTIDSKVRSLKRQYSAINDMLGPGCSGFGWNEEYKCIVAEKEVFDEW--VKVRSLF 120
           I + STIDS+++ +KR + A+ +M GP CSGFGWN+E KCIVAEKEVFD+W     + L 
Sbjct: 61  IHA-STIDSRIKLMKRMFHALAEMRGPNCSGFGWNDEKKCIVAEKEVFDDWSHPAAKGLL 120

Query: 121 INWFNACIFQLPLSCKGSTKQAISSLRGTRLRVRQGSGCDVPAEQAAESPPVDAEGDSNF 180
              F   +    LS      +A     G R       G + P    AE+   DA  D++F
Sbjct: 121 NKSF---VHYDELSYVFGKDRA----TGGRAESFADIGSNDPPGYDAEA--ADAMPDTDF 180

Query: 181 QGTHDYYVPIPPVENLATDVEFEDVPITPTSR-SSTAGSSQGRKRSRASYEAKFLEIMRQ 240
                     PP+ +   ++  +D+  T T+R S     S G KR R  +     +I+R 
Sbjct: 181 ----------PPMYSPGLNMSPDDLMETRTARVSERRNVSSGSKRKRPGHATDSGDIVRT 240

Query: 241 VVSIQETQFTKIADWPDTQDTREFKRRETVGEMLMAQSELTDRERVSLMRILFADTKMTN 300
            +     Q  +IA+WP  Q     + R+ +   L A  ELT  +R  LMRIL  +     
Sbjct: 241 AIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMDRCRLMRILMRNVDDMK 300

Query: 301 MMLSVPPTLRLQFLRDLLEERR 320
             L VP  ++  +   +L+E +
Sbjct: 301 AFLEVPDHMKYPYCSLILQENQ 302

[Close]

BLAST of Lcy07g001080 vs. NCBI nr
Match: KAA0032766.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-40
Identity = 112/318 (35.22%), Postives = 157/318 (49.37%), Query Frame = 0


Query: 1   MAGADKQPKHIWTRLEEAKLVESLVELVHEGGWRGDNGTFRPGYLARLKRMLKGKIPTCT 60
           M+ +++ P+H+WTR EE  LVE L+ELV  GGW+ DNGTFRPGYLA+L RM+  K+P C 
Sbjct: 1   MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 60

Query: 61  IESTSTIDSKVRSLKRQYSAINDMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKVRSLFIN 120
           + +T+ ID ++++LKR + AI +M GP CSGFGWN+E KCIVAEKE+FD WV+       
Sbjct: 61  VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 120

Query: 121 WFNACIFQLPLSCKGSTKQAISSLRGTRLRVRQGSGCDVPAEQAAESPPVDAEGDSNFQG 180
             N      P              R T      G   +  A+  +  P    +      G
Sbjct: 121 LLNK-----PFPYYDELTYVFGRDRAT------GRFAETFADVGSNEPGGGYDRFDMGDG 180

Query: 181 THDYYVPIPPVENLATDVEFEDVPITPTSRSSTAGS-SQGRKRSRASYEAKFLEIMRQVV 240
             D+    PPV +   D+  +DV  +  SR+S   + S G KR R S     LE +   +
Sbjct: 181 NEDF----PPVYSQGVDISQDDVRASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLAL 240

Query: 241 SIQETQFTKIADWPDTQDTREFKRRETVGEMLMAQSELTDRERVSLMRILFADTKMTNMM 300
                Q  +IA+WP      +   R     +L    ELT  +R  L R L +        
Sbjct: 241 DQTNEQLRQIAEWPARNLANDNHVRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGF 300

Query: 301 LSVPPTLRLQFLRDLLEE 318
           + +P   R  F R LL +
Sbjct: 301 VLMPEDEREGFCRVLLRD 303

[Close]

BLAST of Lcy07g001080 vs. NCBI nr
Match: KAA0036924.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-40
Identity = 112/318 (35.22%), Postives = 157/318 (49.37%), Query Frame = 0


Query: 1   MAGADKQPKHIWTRLEEAKLVESLVELVHEGGWRGDNGTFRPGYLARLKRMLKGKIPTCT 60
           M+ +++ P+H+WTR EE  LVE L+ELV  GGW+ DNGTFRPGYLA+L RM+  K+P C 
Sbjct: 52  MSTSNRAPRHVWTREEEGTLVECLMELVSMGGWKSDNGTFRPGYLAQLVRMMAEKLPGCQ 111

Query: 61  IESTSTIDSKVRSLKRQYSAINDMLGPGCSGFGWNEEYKCIVAEKEVFDEWVKVRSLFIN 120
           + +T+ ID ++++LKR + AI +M GP CSGFGWN+E KCIVAEKE+FD WV+       
Sbjct: 112 VRATTVIDCRIKTLKRTFQAIAEMRGPACSGFGWNDEEKCIVAEKELFDNWVRSHPAAKG 171

Query: 121 WFNACIFQLPLSCKGSTKQAISSLRGTRLRVRQGSGCDVPAEQAAESPPVDAEGDSNFQG 180
             N      P              R T      G   +  A+  +  P    +      G
Sbjct: 172 LLNK-----PFPYYDELTYVFCRDRAT------GRFAETFADVGSNEPGGGYDRFDMGDG 231

Query: 181 THDYYVPIPPVENLATDVEFEDVPITPTSRSSTAGS-SQGRKRSRASYEAKFLEIMRQVV 240
             D+    PPV +   D+  +DV  +  SR+S   + S G KR R S     LE +   +
Sbjct: 232 NEDF----PPVYSQGVDISQDDVCASRPSRASEGRTGSSGSKRKRGSQRDFELEAIHLAL 291

Query: 241 SIQETQFTKIADWPDTQDTREFKRRETVGEMLMAQSELTDRERVSLMRILFADTKMTNMM 300
                Q  +IA+WP      +   R     +L    ELT  +R  L R L +        
Sbjct: 292 DQTNEQLRQIAEWPARNLANDNHMRTEFFRILREMPELTSLDRALLQRHLLSRMDDLRGF 351

Query: 301 LSVPPTLRLQFLRDLLEE 318
           + +P   R  F R LL +
Sbjct: 352 VLMPEDEREGFCRVLLRD 354

The following BLAST results are available for this feature:

BLAST of Lcy07g001080 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy07g001080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0H7	1.1e-43	35.76	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B4L3	1.1e-43	35.76	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
A0A5A7TN44	1.7e-41	35.53	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UME4	6.5e-41	37.58	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TRV1	8.5e-41	35.22	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lcy07g001080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441954.1	2.2e-43	35.76	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret...	[more]
KAA0044610.1	3.5e-41	35.53	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0057083.1	1.3e-40	37.58	retrotransposon protein [Cucumis melo var. makuwa] >TYK09001.1 retrotransposon p...	[more]
KAA0032766.1	1.8e-40	35.22	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0036924.1	1.8e-40	35.22	retrotransposon protein [Cucumis melo var. makuwa]	[more]

BLAST of Lcy07g001080 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024752	Myb/SANT-like domain	PFAM	PF12776	Myb_DNA-bind_3	coord: 12..110 e-value: 4.9E-7 score: 30.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..179
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 200..317 coord: 7..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy07g001080.1	Lcy07g001080.1	mRNA