Lcy06g020010 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAAGAATGTAACTTAATTACTTTTTGTTTATTATACTTTATCTAGTTAAATTATGGTCAGATACCTCTTCATGCACGTTTGGAATACATTTCAATTTAAATATTTTTCAAAAATGCATTTTTTAAAAAACATTTTATATAAAAATTGTTTAGAATTTAAACACTCATATGTTCTGGTTGCATTTTCTCACAAGTGTTTTTATACACAAGCTATTGTATACTTAAAAGTCTTTTAAAAAAATTGGTTTCAAGTGTTTCTCTCAAAATAGTTTATTTATCAATCTCATTTTCTAATAAGTCATTTTTAGTGCTTGCCAAACATTATAAATTTTTTCAAAATGATTTTTTTTCAAAATTAAACACTTGAAAAGTTAAACCAAACACACCCTTAATGGACAATTTAACTAATTTATTGAATATATTATACTTTAAAAAAAAAAATCACATGTTACGTGTAGTATAATTTCTCATATTATTATTTTTAACGCCGTATTTAAATATATGGGGTCGTTTGGTGCGCCGGAATTGAATGGGTTTGGAATGGAATGGAATGGAATCTGATGCCCATGTGAATATTTTGCTGGAATCATGATTCCCATGCCTGTGTTTGGTGCATTGGATTTGGGTTGGAATTAATGAAAAGAAAAATAGTGAGACCCACCAAAATTATAAGGAAAATAGAAAAAGAAATGGTGGGTCCCATCAAAATTATGAAGAAAAATTGAGAGAGAAATAGTGGGACCCACCAAAATGTGGTTAAAATAGAAAAAGAAATGGTGGGTCCCATCAAAATTATGAAGAAAAATGGAGAGAGAAATAGTGGGACCTACCAAAATGTGGGAATGGATTGGAATCCACATGCCCACCATTTCATTCCAAACCCACACCATTCCCGGCCAACCAAACATGGGCATCTCTTTCCAATCCATTCCAACCAATTCCAAACCCGTGGGCCAAACGACCCCGATATGTTTAATCTAAAACAAGTAAGAATTACTAAGGGCCCGTTTGGTACAAGGTTTTTGGAGATGGGAATGGGCAAGGGTTTCTAATACCCTTGTTTGTTTCAAGATTTCTGTGGTGGGTCCAGGAAATAACGCATTCCCAGGCATCATTTATGCCCATAAGCAAGGGTTTTCTATGCCCTTACAAAAGCATGGGTTTTCTCTTTTCCCATCTCTTTTTTTTTTTTATTTTTATATGCAATTTTATTTTGAATATAGTTAATTAATTAACTAATGGATACTAAATTAAAAATAATATAATAAATTATTTAATTAGATTAAATAATAATTTGTCAAGAATTTCATTTTTTTTAAACAAATACTTTTTTCTAGGACTTTTAAACAAATACTTAGTCCAAGTTTATTAAAGGGATGTAATTACATATTTACTAAAATTATAATTAACTAGTCAATATTATCGAAAATATATTTAATTATTGAATTAAAATCATTTAAATGAATTTAGTATAAAAATTCATTTTTCAATAATTATAATTAATTACTTATCGATTATTTATAATCAATTAATTACTTTTTTAAATTTCCTTATAATAAATAAATAATCATATTATTATTAAATATTTATCTAATTAATTTTTATGGATACAATATATTAAATTATTGTAGTTAAAGATATTTATTAAAAAATTAATTAAATAATTTTAGTTTGTTAAATTAACATAGTTTATCCCATTAAAATCATTTCATGATTATTATTTCATTAATTTTTATTAATAGTTTGAATTAATTTTGATTATTTTATTGATTAATTTATTAAAATTACATAAAGTATACCTGATTAATTCTAAAAAATAAATACAGACATAATTTGTTCTCATAAAATCCTGATGACATTCTCATGCACAACCAAACACAGTTATCTTTGATTCCCAGCAATCTTATTCCCAGGCATAGTATTTCCAGACATCATGTATTCCCAGGCATCTATAAAACCTTAAACCAAACGGACCCTAAAGGTTAAGAAAAAAAGTAAATACAAATTTTTGTCTATTAACTATTATGATTTTGACTGCGACTATATATATATATATATATATATATTTGAAAACCAACCATCAATATATATATATATATATATATTTGAAAACCAACCATCATATTTTGTTCGGTCTGCGGAGAGAGAACCACCTGAGTCAAGGAGCCGGAATCCACCGCCACTCTGCTGCTGGAAGCTCAATTCCGATGCTTCGTGGAACATCAAGGATGAGCGGAGTGGGTTAGGCTGGATTGTTCGTGACTCCGACAGGTCTCCCGTCTGTGCAGACATTGTTTCGAGTAAAAATCTGTGGCCGACGAAAGCTTTGGAAGCAAAAGCTATGTGGGAGGGTTTGAAAAGCTTACAATTGCTCAATTTTTTGTCGCAGATGATTGAAGTTGAATCCGATTGCCTTGAATTGATCGATAATTTGAATTCCGGTGAAGAAGACCTTTCGGATTCCAAAGTCTTTGTGGAAGCCATTCTTGATTTGGCTCAATCCTTGGGGGTGCTCCACTTCAAGCACTGCCCGAGGTCACAAAACGGAGCTGCTCACGCTCTTGCTTGA ATGGAAAAGAATAGAGAACCACCTGAGTCAAGGAGCCGGAATCCACCGCCACTCTGCTGCTGGAAGCTCAATTCCGATGCTTCGTGGAACATCAAGGATGAGCGGAGTGGGTTAGGCTGGATTGTTCGTGACTCCGACAGGTCTCCCGTCTGTGCAGACATTGTTTCGAGTAAAAATCTGTGGCCGACGAAAGCTTTGGAAGCAAAAGCTATGTGGGAGGGTTTGAAAAGCTTACAATTGCTCAATTTTTTGTCGCAGATGATTGAAGTTGAATCCGATTGCCTTGAATTGATCGATAATTTGAATTCCGGTGAAGAAGACCTTTCGGATTCCAAAGTCTTTGTGGAAGCCATTCTTGATTTGGCTCAATCCTTGGGGGTGCTCCACTTCAAGCACTGCCCGAGGTCACAAAACGGAGCTGCTCACGCTCTTGCTTGA ATGGAAAAGAATAGAGAACCACCTGAGTCAAGGAGCCGGAATCCACCGCCACTCTGCTGCTGGAAGCTCAATTCCGATGCTTCGTGGAACATCAAGGATGAGCGGAGTGGGTTAGGCTGGATTGTTCGTGACTCCGACAGGTCTCCCGTCTGTGCAGACATTGTTTCGAGTAAAAATCTGTGGCCGACGAAAGCTTTGGAAGCAAAAGCTATGTGGGAGGGTTTGAAAAGCTTACAATTGCTCAATTTTTTGTCGCAGATGATTGAAGTTGAATCCGATTGCCTTGAATTGATCGATAATTTGAATTCCGGTGAAGAAGACCTTTCGGATTCCAAAGTCTTTGTGGAAGCCATTCTTGATTTGGCTCAATCCTTGGGGGTGCTCCACTTCAAGCACTGCCCGAGGTCACAAAACGGAGCTGCTCACGCTCTTGCTTGA MEKNREPPESRSRNPPPLCCWKLNSDASWNIKDERSGLGWIVRDSDRSPVCADIVSSKNLWPTKALEAKAMWEGLKSLQLLNFLSQMIEVESDCLELIDNLNSGEEDLSDSKVFVEAILDLAQSLGVLHFKHCPRSQNGAAHALA Homology
BLAST of Lcy06g020010 vs. ExPASy TrEMBL
Match: A0A6J1D4B6 (uncharacterized protein LOC111017181 OS=Momordica charantia OX=3673 GN=LOC111017181 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 4.2e-11 Identity = 51/143 (35.66%), Postives = 73/143 (51.05%), Query Frame = 0
BLAST of Lcy06g020010 vs. ExPASy TrEMBL
Match: A0A803L9N8 (Uncharacterized protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.1e-08 Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 0
BLAST of Lcy06g020010 vs. ExPASy TrEMBL
Match: A0A7J6H9K5 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_030772 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 9.6e-08 Identity = 46/131 (35.11%), Postives = 62/131 (47.33%), Query Frame = 0
BLAST of Lcy06g020010 vs. ExPASy TrEMBL
Match: A0A803P8R6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 66.6 bits (161), Expect = 9.6e-08 Identity = 45/130 (34.62%), Postives = 67/130 (51.54%), Query Frame = 0
BLAST of Lcy06g020010 vs. ExPASy TrEMBL
Match: A0A7J6F7X7 (RNase H domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_013892 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.8e-07 Identity = 45/131 (34.35%), Postives = 61/131 (46.56%), Query Frame = 0
BLAST of Lcy06g020010 vs. NCBI nr
Match: XP_022148549.1 (uncharacterized protein LOC111017181 [Momordica charantia]) HSP 1 Score: 77.8 bits (190), Expect = 8.6e-11 Identity = 51/143 (35.66%), Postives = 73/143 (51.05%), Query Frame = 0
BLAST of Lcy06g020010 vs. NCBI nr
Match: XP_015388332.1 (uncharacterized protein LOC107178077 [Citrus sinensis]) HSP 1 Score: 70.1 bits (170), Expect = 1.8e-08 Identity = 46/132 (34.85%), Postives = 74/132 (56.06%), Query Frame = 0
BLAST of Lcy06g020010 vs. NCBI nr
Match: XP_015388122.1 (uncharacterized protein LOC107178012 [Citrus sinensis] >XP_024041306.1 uncharacterized protein LOC112098894 [Citrus clementina]) HSP 1 Score: 69.7 bits (169), Expect = 2.3e-08 Identity = 43/132 (32.58%), Postives = 72/132 (54.55%), Query Frame = 0
BLAST of Lcy06g020010 vs. NCBI nr
Match: XP_021763631.1 (uncharacterized protein LOC110728264 [Chenopodium quinoa]) HSP 1 Score: 69.7 bits (169), Expect = 2.3e-08 Identity = 51/149 (34.23%), Postives = 77/149 (51.68%), Query Frame = 0
BLAST of Lcy06g020010 vs. NCBI nr
Match: XP_015381032.1 (uncharacterized protein LOC107174551 [Citrus sinensis]) HSP 1 Score: 69.3 bits (168), Expect = 3.1e-08 Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 0
BLAST of Lcy06g020010 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein ) HSP 1 Score: 46.6 bits (109), Expect = 2.0e-05 Identity = 39/132 (29.55%), Postives = 57/132 (43.18%), Query Frame = 0
BLAST of Lcy06g020010 vs. TAIR 10
Match: AT2G34320.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 9.8e-05 Identity = 38/131 (29.01%), Postives = 62/131 (47.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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