Lcy06g016380 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g016380
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr06: 37402116 .. 37405846 (+)
RNA-Seq ExpressionLcy06g016380
SyntenyLcy06g016380
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGTATGACGAAGGAAAAATGGTGGAGAGAGATTCGAGTTTTAGGGGTTTAGAGTGAGAGGGATTTGAAGAGAAATATGGAGAAACTCGACTAGATCTAGGGGTTGTGCTATCGGTTCATGATCAAGTTTCATCAAACCCTCGATTTCAATTCTTGATTATATTGGCTATCAATGAATCAAAGGTCTTCTTTGACGCTCAGAGCTTCAAGGTTTTTGCAACGTTGTTCATCAGTGGGTCTTTGATAGGGGTGAGAAAAAAAAAGTCGAAAAACCGAGCCAACTGATCGAAACAGAACGCACCAACTTCGGTCGGTCAATTTTTTCATATTTTTGGTTGGGGTCGGTTTTACACATAGTAAAATCGACCTGTTGGTCGGTCGGCTCACCAAAAACGGCAAGAACCGATTAAACCGACCGACTTCTAAAAAAAAAAAGAAATAAGAGGTTGCGTGTCTGGCGAGGACTGTAGGCAGCGCCTGCAGCCTTTGATGGTCTTCCCAAGGATTTTATTAAAAAACAAAACTTTTAATTTAATTTTTTTTATTTCCTTCATAAGAGTCCTTCACTTCCCTACATTTCTTCCTCACTTTCTCTCTAATTTTTTCTTTTCTCCTCACTGTTTTCGTTTCTTATTCTCTTCTTCATTTTTTTGTAGTGTAGTGTATGAATAAAGTTGGGTGTCTTATCCTGGCAACACTATTGATACAACCCATTTTGTAATAGTTATAAATGATTTTATCTAAATCATTCATGTAGAGACATGTGAGTGGGGTGTCATATACAATGAATTTGTATTAGACTATACGACGAAATCATTAATTTTAAATAATTGGAGCTTATAATTTGTAGGTTCATAATGTCCCCTTGTTAGCTCATAGTAATACTAAAGGATCAATTTAGTTCGAAGAAAATTTGAATCAATTGGCAATGAGTGGGGTGACCCTTGTAGCTTATATATTGTGAGGTCTCTACTAATCTTTTCAATGTGGGATCCTCAACATGCCCACTCAAGATGGTGCCTCTTTGGGTTCACCATTCTTGGATCGGATCCCAATTTTTTCTTTGGACCGAATACCCGTTTAATGGGCTCTGATACCACATCAAATAACATGGGCTTCCATCTCAAAACCAATTGGCTATGAGTGGGTGACCCTTGTAGCTTATAAATTGTGAGGTCTCCACTAATCTTTTCAATGTGGGATCCTCAACAAGATATATTAAAGATAAAAGAGCAAAAATATATTTATCTTATTCGATACATTAATTATTAAAACGATTAATGTATATTCGATACATTAAAGAAAAATATATATTTGAAATTTGAATGAGATTCAAATAAGTTAAATATATATTGTAGAGGATTTGAATGAGATTCAAATAAATATAATATAATAGATATTAAAATATAATATTTTAATTATGACAAACATTTGCCCTAGGTCTCTATAAATAGGGCCCTTGGGTTGAGCCATGAACTAATTCAAAGTTGATTCCAATGCTTCTGCTGTGGGGTGAAGAGTTCGTTCCTGTCGGCTATGGGCCTTCACTCTATTCTCACCACCTTTAAGAATACCTTTATTCATATGAATGTCATCAACCAAGCCACTGAAGTTAGTAATATTTCCTCAAACATAGCTGCCAATCTCAGATTCAATCGGCAAGGCTATTCATCCTATTAAGGTAACAAGCAACAACCAAGGAAGAGGCCAAGGTGGAATCAGAGGTAATGGAAGGTCTAGAGGCAATGGAGGAAGAGGAAACTACTATCAAAACAGTGGCTCTAAGCCTACATGTTAGGTACATGGCAAATATGGATATTCTGCACCTGTTTGTTATCATAGGTTTGAGAAGGATTTTGTGTCCCCAAATCAAAACAGTGGGGGACAGAACACAACCTATATTGCCACACCAAAAATAGTTGTTGTCCCTAGTTGGTTGGCAGATGGTGGAGCATCCAATCATATTATTTCTGACCTAAACGATCTCTGTTGGTGATGACTCTAAAATTTTAATTACTAATGTTGGTCACAACATCGTCTATGATGCTTAAGAATATGTCTATGATATTGAAAAATATTTTACATGTCCCTAGTATTAAAAGAAACTTGTTGAGCATATCAAAATTGATTGTAGATAACAATTGTATTGTTGAATTTCATCGAATCATTGTTTTGTAAAGGACAAGGCAACAGGAAAGGTGGTGCTTGAAGGGAGTCTTAGAGATGGTCTTTAGCAACTCCAGTTAAACCTACCCAAGACAAGCTAAGAGTCAAGAAATCAAGTGTAACAAGTCTCCTCCTCAAATTTTGTGTATGTAGTTCGTCCAAAGTCTATTTATCACTACAAGAAAAACAGTGTTACTTGACATTTGGGTTTTTTAATTAGTTGACATTTTTAAACTTATGTAATTTTAACAAAAAAATGTCAAGACTTATGTAATTTTAACAAAAAAAAACGTCAAGAAAAATACAAAAACACGGAGTTTTATGAATTTTTTCGGATTTTTTCACGCTAAGGAAGACTTGATAGTTTAAAAATGTCAAGAATAATGAAATTTCTTTTAATTTAATAAAGGGCTTTTTCAAAATTAGGGTTTTTTCAGTACTTCTATTCTGAAAGCATGCCGCATAGGTACCCTCCCTCTCGCAAAAATCAATCAGACGCCGCACACCACCGTTCTTCTCGCGTGAAGTTACATTCGTAGACTCCCAGACGCCGGCGACGAGACATCCGACGGCGGCGAACGAGACACCCACGGCGGCGAACCTTCACGACCTTCCTAGACGCTGGCGACATGAGACATCCGATAATTTGAGGTCTTCACTCGCGACACCCAAACGCCTTCACTCGCGAGACACCCAGACGCCGCCGACACGAGACATCCGACGGCCTTCACTCGAGAACCTCGACAGCGGTGACTAGAAACTCGACGGCGGCAACACAAACACCCAAACGCCGGCGACTAGAAACTCGACGGCGACGAACAGCTTCATACACCCGTAGAACAGCTTCATTCCCTTTTTACCAACTGGTTCGCTTTCTTACCCCTCTTCTCAAGGTAACTTTTGATTTGGTTTTCTTGTATTGTATTTCAACGGTAATTTGTTTTTCCATCATTGTTTACTAATAATTTTATATTTGTTTGGTCTCATTCTACTACTTATAGCTCCACTCTTCTCTCTTTTGGTGGAGAACTATAGCACCTCAATTCTATTGTCACTCTTCAATAAGACGTGAACATGATGGATCTAATTTGTTGGATTTTTGCATGTAGGAGGAGCAACAAAAAGTTGTAATTGAGAAGGTTACACAAAATAAGAGAGAGTGCATTACAACAGTAAAAGGGTTATTAGACCTTTTGGTGAGCAATACTTTGTTTCCTATCCATGCTCGACATTCCTTATTGTTACTTTAATTTCAATAATAGTTTGTTTAACTTGATTATCTAGAAGTTAAACTAAGTGAGGCTTCAAAGAAATTTGGGAAAAGTTTGCTATTGGGGCCTGTGGTTATGGTTATTAACTTCTGGTCCATATTATTATAGCTCTTTAAGATATTTTGGTTATTGATTAAGTAAACCAAAGATGATGCTTGAAGAACTCTTGTAATTACAAGTAGCAGAACTTTATCTTTGATGGTTTTATGGGAACTAATATCCTATTAGATGTTAATAAACATTTTCCCTTTTGCATTTTTTTTTACGTTCAGGATTGTTGTTGTTCTTGA

mRNA sequence

ATGAAGGTACCCTCCCTCTCGCAAAAATCAATCAGACGCCGCACACCACCGTTCTTCTCGCGTGAAGTTACATTCGTAGACTCCCAGACGCCGGCGACGAGACATCCGACGGCGGCGAACGAGACACCCACGGCGGCGAACCTTCACGACCTTCCTAGACGCTGGCGACATGAGACATCCGATAATTTGAGGTCTTCACTCGCGACACCCAAACGCCTTCACTCGCGAGACACCCAGACGCCGCCGACACGAGACATCCGACGGCCTTCACTCGAGAACCTCGACAGCGAAACTCGACGGCGACGAACAGCTTCATACACCCGTAGAACAGCTTCATTCCCTTTTTACCAACTGGTTCGCTTTCTTACCCCTCTTCTCAAGGAGGAGCAACAAAAAGTTGTAATTGAGAAGGTTACACAAAATAAGAGAGAGTGCATTACAACAGTAAAAGGGTTATTAGACCTTTTGGATTGTTGTTGTTCTTGA

Coding sequence (CDS)

ATGAAGGTACCCTCCCTCTCGCAAAAATCAATCAGACGCCGCACACCACCGTTCTTCTCGCGTGAAGTTACATTCGTAGACTCCCAGACGCCGGCGACGAGACATCCGACGGCGGCGAACGAGACACCCACGGCGGCGAACCTTCACGACCTTCCTAGACGCTGGCGACATGAGACATCCGATAATTTGAGGTCTTCACTCGCGACACCCAAACGCCTTCACTCGCGAGACACCCAGACGCCGCCGACACGAGACATCCGACGGCCTTCACTCGAGAACCTCGACAGCGAAACTCGACGGCGACGAACAGCTTCATACACCCGTAGAACAGCTTCATTCCCTTTTTACCAACTGGTTCGCTTTCTTACCCCTCTTCTCAAGGAGGAGCAACAAAAAGTTGTAATTGAGAAGGTTACACAAAATAAGAGAGAGTGCATTACAACAGTAAAAGGGTTATTAGACCTTTTGGATTGTTGTTGTTCTTGA

Protein sequence

MKVPSLSQKSIRRRTPPFFSREVTFVDSQTPATRHPTAANETPTAANLHDLPRRWRHETSDNLRSSLATPKRLHSRDTQTPPTRDIRRPSLENLDSETRRRRTASYTRRTASFPFYQLVRFLTPLLKEEQQKVVIEKVTQNKRECITTVKGLLDLLDCCCS
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..76
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..44

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g016380.1Lcy06g016380.1mRNA