Lcy06g013350 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g013350
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	EIN3-binding F-box protein 1-like
Location	Chr06: 19556858 .. 19560861 (-)
RNA-Seq Expression	Lcy06g013350
Synteny	Lcy06g013350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGGATTTGGGTTGTTCTGTGTCCATTTCTTCTCGTATGGATGGGTATTTTCAGCCGAGCAAAAGGGCTCGTACAAGTTTCAGAGTTGCATTTGAGAGAAGCGATTTCGAGCAAGGGGCTAAAAATGCTTCTATTGATGATCTTCCTGATGAATGCCTCTTTGAAATCTTTAGACGTTTGCGAAGTGGGAAATCAAAGAGTTCTTGTGCATGTGTCTCGAAGTGGTGGCTTATGCTTCTAAGCAACATCCGTAGGGCTGAAATCAGTAATAACTTATTTGGGTCCTCAAAGTCTGAGGATCTTTGTCCTGTTTTTGATGATATTGTAATCAACAGTGGTTATGAAGATCAAGAACTTGAAAATAATGGATATCTTACAAGACATTTGGAGGGGAAGAAAGCAAATGATATAAGACTTGCTGCTATTGTTATAGGAACCAGTAACCATGGGGGATTGGGGAAACTTTCTATTAGAGGGATGAACTCTATATGTGGAGTTACTAATGTTGGTCTTACATCAACTGATATAAGACTTGTTGTTATTGCTGTAGGAACTAGTAACCATGGGGGATTGGGGAAGCTTTCTATTAGAGGGATGAACTCTATATGTAACGGCCTAGGATTTTTAAAACTATCCTAACGACATTACTAACTTCTAACCGAGAACCAACCGAGTGCTCCAAAAATTTCGGCAACATAACGACATACATACGACTATCCCAAAATTTTCTAAGACCTAATAAACAAGATAAGCACTTCTATATAACATTCTCAACAACCCACCATGCTACAACACTAAAGAACTTCAGAGAACAAGCGAGTCAGGTCTCGCGACAATATAAATCAAATAAGTAGGAACATCCACAACTAAAACTCAACTAAGTACAGCTAACTACACTTTAACTTAATAGAAACAAACTTGATCATTATAAACCAAAATAAGAGATAGAGTCTATTAAACAGCTCAACTAAGTCTAGAGTCTCAACAAGAATAAACTTCAAGACTAAATCAAACGGACAAACAGTTGTCCAACATAATAAGCAACAACTATCCTACCAACGAAAATATAAAGGAAACACAATGCTAGCTAGCTATGGTCCTTCCTCATATGCCTCCTCTGCATCACCATGGTCAGCACAGTCCTCATAACCTGCATAATCTGGGAGTTGGGGGGAAGAGAGGAGAGGGGGTCAGTACAACCATGGTACTGGTAAGCAGCCCCTACCTGAGAAGCCATCAAACAGCAACCAAGCAACCAACATGCTTTTCATGTGCAAACAACATACTTCTCAAAGCTATAAACACAACAACATGCTTAAAAGCAAGTAAAATGAATGACTCTCCTAAGTCAAACCTCGTGCATCTCTCTATGCAACTCACAACTAATCACTCATGCTCCACGAGCTCACTCAACAAACTTATTTAGCCCTCACTTGGCTCTCTAAGACTGATCCTTCGAGTCGCACTATCCCCTGACCATTTGTACCCAGGGCCACAATGCTCTCTACGGAGCTCGGCGTTCAACCCTTGACCATTTGTACCCAATGCCTCGAACTGTGCATCACCCCTTGGCCATTTGTACCCTAGGTGCACCGATGCTTTCTAGACTCATCACACCGATCCCTGACCATTTGTACCCAAGGCCTCGATGCTCCTCTTAAAACCACTGGTGACATGCCACCCCTCGACCATTTGTACCCGAGGTGCACTGGCATTCACCCAACTTGCCTTTCTTTCACATTCAGGTCCCTGACCTCTTTATTACCACTATCTAGAATGCATATGCCCTGCAACATGCTCCTAGACTCATGTACTATGCCCACCAAGCATATACATACACACCAAACTACCTAGAATGCATATGCCTGCATCATGCTTCTAGACTCATGTACTGTGCCCACCAAGCATATACATACAGCAACAACATACTCTCGACTTATGCTTAACTCATAAAAGCATAACAACTAGCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAGATATATATATATAAGCAAAGCAAGAAACAAGAGAATAATCCAAGAGCTCTAAACCAAAAGATAATCCAAGAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAGATATATATATATATAAGCAAAGCAAGAAACAAGAGAATAATCCAAGAGCTCTAAACCAAAAGATAATCCAAGAACTACTTACAGGAAGCTCTAAACGCTCCTTAACTAGATGAAAAGCTCCAAAGATAATCCAAGAGCCCCTAAACCAAAACTAGGCAAGCTCCTAACATCAAGGATGACATATAAAGATCAAAATTGAGCTTAACCACCCTATTAGAACCTAAAAGGTACATAGGGAAGAGTTTCTTACCAAACAAACTCAACGCAAGCTTGAAGGCTAGCTCGACGACTTGGAGCAAGACTAATTTCCTAAGACAAAGACATTCGAGCATCAAAAGCTAGCCAAAGGCACCTAATCACAATTAGAGAGATTTAAATAAACCTTACCGCCTAGCTTTGCCAACACGAACTTGATCCTTGCTTGGAAGTATACGAAACGGTTCGCATTGGATCAAACTTCAAACAAAGAAAACCCAAGAGTTAGAGGCGACTCTAAAACGCCCTAAATTAAGTTCAAAGAATATAAAAGGGACTTACTGCCTTAACTTCCCAAAGGAAACTTAGGTCTTTGCTAAAAAACGTCCAACGGAGTTCGAATCTATAAAACAAAGAGTTTCTAAGGATTAGGGACCGATCTAACATACTTTAAAACACTCTAAACAAGACCAGAATGAGACAAGACCAGAATGAGACAAGTATGCTAAGAGTCACTGAACCTTACCGAACAGGGTCTGAATCCTTGCTGAAACGTGTTTGATAAGATTCGAATTCACAAACATAAATTCCTTAGGCTATGGGTAACTTGAGTTGAGACCTTTCGAGCTATGGGTATCCACCGAACACCTAATTCAACCCAAGACGCCGCTGGACAAGAATGGAATACACCCAATTCTGCAATTTCGAAGACGATAACGAATGGGTAAATCATTCTTGAGAGTGATTAAGCATGGGCTAATGTCGAAAGCTTACCAATCGAGTCTGACACGCTGAAAAGGATGTGAAACGCCAAATTCGAAGCTGCTTTTCACGAGTTGCCGATTAACCCGAGGAGGGAGAACGAGAAAGAGATGAAACTGATGGCTCGTGCAACCCACGCTTGGAAATCTACCGGAGTCGCACTCTTGCAAGAGGCCTTCGCGAGAGTTGCTGCTACGACCACATACACCTACTGCGCGCGGATGAAGAAAACGAGAGGGAGAGAAAATTCCGAGCTTGCTCAGAACGAAAGAGAAGAAACAACGGCTGGCCTTCGCACGCGGGTCTCGCTGCCGGCGCTTGAACAACACGAGAGGGAAAGAGAGACGAGCCAGAAAGAGAGCTGGAGACTGCCGGCTGAAGAAAACGTAAGGGGGGAGGCAGTCACGGCGGCACAACACACGGGCAAGAGAGGGAGAAGAAGAAATTCAGATGAGGCTGGCGGCTGGAATTCACGACAAGAAGTTGAGGGAGAGGGGTAG

mRNA sequence

ATGGTGGATTTGGGTTGTTCTGTGTCCATTTCTTCTCGTATGGATGGGTATTTTCAGCCGAGCAAAAGGGCTCGTACAAGTTTCAGAGTTGCATTTGAGAGAAGCGATTTCGAGCAAGGGGCTAAAAATGCTTCTATTGATGATCTTCCTGATGAATGCCTCTTTGAAATCTTTAGACGTTTGCGAAGTGGGAAATCAAAGAGTTCTTGTGCATGTGTCTCGAAGTGGTGGCTTATGCTTCTAAGCAACATCCGTAGGGCTGAAATCAGTAATAACTTATTTGGGTCCTCAAAGTCTGAGGATCTTTGTCCTGTTTTTGATGATATTGTAATCAACAGTGGTTATGAAGATCAAGAACTTGAAAATAATGGATATCTTACAAGACATTTGGAGGGGAAGAAAGCAAATGATATAAGACTTGCTGCTATTGTTATAGGAACCAGTAACCATGGGGGATTGGGGAAACTTTCTATTAGAGGGATGAACTCTATATGTGGAGTTACTAATGTTGGTCTTACATCAACTGATATAAGACTTGTTGTTATTGCTGTAGGAACTACTGCTTTTCACGAGTTGCCGATTAACCCGAGGAGGGAGAACGAGAAAGAGATGAAACTGATGGCTCGTGCAACCCACGCTTGGAAATCTACCGGAGTCGCACTCTTGCAAGAGGCCTTCGCGAGAGTTGCTGCTACGACCACATACACCTACTGCGCGCGGATGAAGAAAACGAGAGGGAGAGAAAATTCCGAGCTTGCTCAGAACGAAAGAGAAGAAACAACGGCTGGCCTTCGCACGCGGGTCTCGCTGCCGGCGCTTGAACAACACGAGAGGGAAAGAGAGACGAGCCAGAAAGAGAGCTGGAGACTGCCGGCTGAAGAAAACGTAAGGGGGGAGGCAGTCACGGCGGCACAACACACGGGCAAGAGAGGGAGAAGAAGAAATTCAGATGAGGCTGGCGGCTGGAATTCACGACAAGAAGTTGAGGGAGAGGGGTAG

Coding sequence (CDS)

ATGGTGGATTTGGGTTGTTCTGTGTCCATTTCTTCTCGTATGGATGGGTATTTTCAGCCGAGCAAAAGGGCTCGTACAAGTTTCAGAGTTGCATTTGAGAGAAGCGATTTCGAGCAAGGGGCTAAAAATGCTTCTATTGATGATCTTCCTGATGAATGCCTCTTTGAAATCTTTAGACGTTTGCGAAGTGGGAAATCAAAGAGTTCTTGTGCATGTGTCTCGAAGTGGTGGCTTATGCTTCTAAGCAACATCCGTAGGGCTGAAATCAGTAATAACTTATTTGGGTCCTCAAAGTCTGAGGATCTTTGTCCTGTTTTTGATGATATTGTAATCAACAGTGGTTATGAAGATCAAGAACTTGAAAATAATGGATATCTTACAAGACATTTGGAGGGGAAGAAAGCAAATGATATAAGACTTGCTGCTATTGTTATAGGAACCAGTAACCATGGGGGATTGGGGAAACTTTCTATTAGAGGGATGAACTCTATATGTGGAGTTACTAATGTTGGTCTTACATCAACTGATATAAGACTTGTTGTTATTGCTGTAGGAACTACTGCTTTTCACGAGTTGCCGATTAACCCGAGGAGGGAGAACGAGAAAGAGATGAAACTGATGGCTCGTGCAACCCACGCTTGGAAATCTACCGGAGTCGCACTCTTGCAAGAGGCCTTCGCGAGAGTTGCTGCTACGACCACATACACCTACTGCGCGCGGATGAAGAAAACGAGAGGGAGAGAAAATTCCGAGCTTGCTCAGAACGAAAGAGAAGAAACAACGGCTGGCCTTCGCACGCGGGTCTCGCTGCCGGCGCTTGAACAACACGAGAGGGAAAGAGAGACGAGCCAGAAAGAGAGCTGGAGACTGCCGGCTGAAGAAAACGTAAGGGGGGAGGCAGTCACGGCGGCACAACACACGGGCAAGAGAGGGAGAAGAAGAAATTCAGATGAGGCTGGCGGCTGGAATTCACGACAAGAAGTTGAGGGAGAGGGGTAG

Protein sequence

MVDLGCSVSISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRRLRSGKSKSSCACVSKWWLMLLSNIRRAEISNNLFGSSKSEDLCPVFDDIVINSGYEDQELENNGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGLTSTDIRLVVIAVGTTAFHELPINPRRENEKEMKLMARATHAWKSTGVALLQEAFARVAATTTYTYCARMKKTRGRENSELAQNEREETTAGLRTRVSLPALEQHERERETSQKESWRLPAEENVRGEAVTAAQHTGKRGRRRNSDEAGGWNSRQEVEGEG

Homology

[Close]

BLAST of Lcy06g013350 vs. ExPASy Swiss-Prot
Match: Q9SKK0 (EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-26
Identity = 87/212 (41.04%), Postives = 111/212 (52.36%), Query Frame = 0


Query: 3   DLGCSVSISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRRLR 62
           D    +S+ S  D YF PSKR+R      F  S FE+  K  SID LPDECLFEIFRRL 
Sbjct: 25  DASLLLSLGSFADVYFPPSKRSRVVAPTIF--SAFEK--KPVSIDVLPDECLFEIFRRLS 84

Query: 63  SGKSKSSCACVSKWWLMLLSNIRRAEISNNLFGSSKSEDLCPVFDDIVINSGYEDQELEN 122
             + +S+CA VSK WL L+S+IR+ EI                     + S   +   + 
Sbjct: 85  GPQERSACAFVSKQWLTLVSSIRQKEID--------------------VPSKITEDGDDC 144

Query: 123 NGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGL---------- 182
            G L+R L+GKKA D+RLAAI +GT+  GGLGKLSIRG NS   V+++GL          
Sbjct: 145 EGCLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSNS-AKVSDLGLRSIGRSCPSL 204

Query: 183 ---------TSTDIRLVVIAVGTTAFHELPIN 196
                    T TD  L+ IA G     +L +N
Sbjct: 205 GSLSLWNVSTITDNGLLEIAEGCAQLEKLELN 211

[Close]

BLAST of Lcy06g013350 vs. ExPASy Swiss-Prot
Match: Q708Y0 (EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.3e-12
Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = 0


Query: 4   LGCSVSIS-SRMDGYFQPSKR----ARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIF 63
           LG S+ +S     G + P+++    A TSF   FE        K  SID LP+ECLFEI 
Sbjct: 15  LGGSMYLSPGSCPGVYYPARKRLRVAATSFYSGFEE-------KQTSIDVLPEECLFEIL 74

Query: 64  RRLRSGKSKSSCACVSKWWLMLLSNIRRAEISNN 93
           RRL SG+ +S+CACVSK WL LLS+I R+E++ +
Sbjct: 75  RRLPSGQERSACACVSKHWLNLLSSISRSEVNES 101

HSP 2 Score: 65.9 bits (159), Expect = 1.0e-09
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 110 VINSGYEDQELENNGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTN 169
           V  S  +D E E  G+L+R LEGKKA D+RLAAI +GTS+ GGLGKL IRG      VT+
Sbjct: 98  VNESSVQDVE-EGEGFLSRSLEGKKATDLRLAAIAVGTSSRGGLGKLQIRGSGFESKVTD 157

Query: 170 VGL 173
           VGL
Sbjct: 158 VGL 159

[Close]

BLAST of Lcy06g013350 vs. ExPASy TrEMBL
Match: A0A6J1CT81 (EIN3-binding F-box protein 1-like OS=Momordica charantia OX=3673 GN=LOC111014530 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 2.8e-63
Identity = 126/174 (72.41%), Postives = 143/174 (82.18%), Query Frame = 0


Query: 1   MVDLGCSVSISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRR 60
           MV+L C +  SSR+D +FQP+KR RTSFRVAFER  +EQGA+   IDDLPDECLFEIFRR
Sbjct: 24  MVNLSCILPFSSRVDVHFQPTKRVRTSFRVAFERRGYEQGAERLCIDDLPDECLFEIFRR 83

Query: 61  LRSGKSKSSCACVSKWWLMLLSNIRRAEISNNLFGSSKSEDLCPVFDDIVINSGYEDQEL 120
           L+SGK+KSSC CVS+ WLMLLSNIR AE  NN FGS K++  CPV D+I I+ G +DQEL
Sbjct: 84  LQSGKAKSSCGCVSRRWLMLLSNIRGAETCNNSFGSLKNQHQCPVSDNIEISGGCDDQEL 143

Query: 121 ENNGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGLTS 175
           ENNGYLTR LEGKKA D RLAAI +GTS+HGGLGKLSIRGMNS C VTNVGL S
Sbjct: 144 ENNGYLTRTLEGKKATDTRLAAIAVGTSSHGGLGKLSIRGMNSCCRVTNVGLIS 197

[Close]

BLAST of Lcy06g013350 vs. ExPASy TrEMBL
Match: A0A6J1HB62 (EIN3-binding F-box protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111461733 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.1e-46
Identity = 108/165 (65.45%), Postives = 118/165 (71.52%), Query Frame = 0


Query: 10  ISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRRLRSGKSKSS 69
           ISSRMD YFQP+KRA                     IDDLPDECLFEIF+RL++GKSKS 
Sbjct: 3   ISSRMDVYFQPTKRA---------------------IDDLPDECLFEIFKRLQTGKSKSC 62

Query: 70  CACVSKWWLMLLSNIRRAEISNNLFGSSKSEDLCPVFDDIVINSGYEDQELENNGYLTRH 129
           CACVS+ WLMLLS IRRAE  NN FGSSKS       DD  ++SG       NNGYLTRH
Sbjct: 63  CACVSRRWLMLLSTIRRAENGNNSFGSSKS-------DDTEMSSGC------NNGYLTRH 122

Query: 130 LEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGLTS 175
           LEGK+A DIRLAAI +GTSNHGGLGKLSI+GMNSICG TNVGLTS
Sbjct: 123 LEGKRATDIRLAAIAVGTSNHGGLGKLSIKGMNSICGATNVGLTS 133

[Close]

BLAST of Lcy06g013350 vs. ExPASy TrEMBL
Match: A0A6J1JJ10 (EIN3-binding F-box protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111485028 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 5.3e-46
Identity = 108/174 (62.07%), Postives = 122/174 (70.11%), Query Frame = 0


Query: 1   MVDLGCSVSISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRR 60
           MV+L C + ISSR+D YFQP+KRA                     IDDLPDECLFEIF+R
Sbjct: 17  MVNLSCFMPISSRLDVYFQPTKRA---------------------IDDLPDECLFEIFKR 76

Query: 61  LRSGKSKSSCACVSKWWLMLLSNIRRAEISNNLFGSSKSEDLCPVFDDIVINSGYEDQEL 120
           L++GKSKS CACVS+ WLMLLS IRRAE  NN  GSSKS       DD  ++SG      
Sbjct: 77  LQTGKSKSCCACVSRRWLMLLSTIRRAENGNNSSGSSKS-------DDTEMSSGC----- 136

Query: 121 ENNGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGLTS 175
            NNGYLTR+LEGK+A D RLAAI +GTSNHGGLGKLSI+GMNSICG TNVGLTS
Sbjct: 137 -NNGYLTRYLEGKRATDTRLAAIAVGTSNHGGLGKLSIKGMNSICGATNVGLTS 156

[Close]

BLAST of Lcy06g013350 vs. ExPASy TrEMBL
Match: A0A6J5VI53 (F-box domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS46826 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 5.9e-45
Identity = 105/174 (60.34%), Postives = 126/174 (72.41%), Query Frame = 0


Query: 2   VDLGCSVSISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRRL 61
           +DLGC +SI      Y++PSKRAR   + AFE SDFEQ  +  SI+ LPDECLFEIFRRL
Sbjct: 24  MDLGCLLSIGP--SAYYRPSKRARNDSQFAFEGSDFEQ-VRKPSIEVLPDECLFEIFRRL 83

Query: 62  RSGKSKSSCACVSKWWLMLLSNIRRAEISNNLFGSSKSEDL-CPVFDDIVINSGYEDQEL 121
             GK +SSCACVSK WLMLLS+IR+ ++  +       + L     DD  I +G EDQEL
Sbjct: 84  DGGKERSSCACVSKKWLMLLSSIRKVDLCKSPAADKVIQPLKLDNSDDTEITTGEEDQEL 143

Query: 122 ENNGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGLTS 175
           EN+GYLTR LEGKKA DIRLAAI +GTS+ GGLGKLSIRG NS  GVTN+GL++
Sbjct: 144 ENDGYLTRCLEGKKATDIRLAAIAVGTSSRGGLGKLSIRGSNSFRGVTNLGLSA 194

[Close]

BLAST of Lcy06g013350 vs. ExPASy TrEMBL
Match: A0A7N2L1S7 (F-box domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 1.0e-44
Identity = 106/173 (61.27%), Postives = 128/173 (73.99%), Query Frame = 0


Query: 2   VDLGCSVSISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRRL 61
           +DLGC  SI S++D Y  PSKR R S    F R++ EQ  K  SI+ LPDECLFEIFRRL
Sbjct: 24  MDLGCLFSIVSQVDVYCPPSKRPRISAPFIFGRNELEQD-KKPSIEVLPDECLFEIFRRL 83

Query: 62  RSGKSKSSCACVSKWWLMLLSNIRRAEISNNLFGSSKSEDLCPVFDDIVINSGYEDQELE 121
             GK KSSCACVSK WLMLLS+IR+AEI + L          PV +D+ + +G EDQ+LE
Sbjct: 84  DGGKEKSSCACVSKRWLMLLSSIRKAEICHEL----------PVSNDVDMVTGDEDQDLE 143

Query: 122 NNGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGLTS 175
           ++GYL+R LEGKKA DIRLAAI +GTS+ GGLGKLSIRG NS+ GVTN+GL+S
Sbjct: 144 SDGYLSRCLEGKKATDIRLAAIAVGTSSCGGLGKLSIRGSNSLRGVTNLGLSS 185

[Close]

BLAST of Lcy06g013350 vs. NCBI nr
Match: XP_022145000.1 (EIN3-binding F-box protein 1-like [Momordica charantia])

HSP 1 Score: 252.3 bits (643), Expect = 5.8e-63
Identity = 126/174 (72.41%), Postives = 143/174 (82.18%), Query Frame = 0


Query: 1   MVDLGCSVSISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRR 60
           MV+L C +  SSR+D +FQP+KR RTSFRVAFER  +EQGA+   IDDLPDECLFEIFRR
Sbjct: 24  MVNLSCILPFSSRVDVHFQPTKRVRTSFRVAFERRGYEQGAERLCIDDLPDECLFEIFRR 83

Query: 61  LRSGKSKSSCACVSKWWLMLLSNIRRAEISNNLFGSSKSEDLCPVFDDIVINSGYEDQEL 120
           L+SGK+KSSC CVS+ WLMLLSNIR AE  NN FGS K++  CPV D+I I+ G +DQEL
Sbjct: 84  LQSGKAKSSCGCVSRRWLMLLSNIRGAETCNNSFGSLKNQHQCPVSDNIEISGGCDDQEL 143

Query: 121 ENNGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGLTS 175
           ENNGYLTR LEGKKA D RLAAI +GTS+HGGLGKLSIRGMNS C VTNVGL S
Sbjct: 144 ENNGYLTRTLEGKKATDTRLAAIAVGTSSHGGLGKLSIRGMNSCCRVTNVGLIS 197

[Close]

BLAST of Lcy06g013350 vs. NCBI nr
Match: XP_038878710.1 (EIN3-binding F-box protein 1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-51
Identity = 114/174 (65.52%), Postives = 127/174 (72.99%), Query Frame = 0


Query: 1   MVDLGCSVSISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRR 60
           M D    + ISSRMD Y QPSKR RT+FR+ F+R+DFE+  KN SIDDLPDECLFEIF+R
Sbjct: 1   MEDFTYFLPISSRMDVYCQPSKRVRTNFRIPFDRNDFEEEGKNPSIDDLPDECLFEIFKR 60

Query: 61  LRSGKSKSSCACVSKWWLMLLSNIRRAEISNNLFGSSKSEDLCPVFDDIVINSGYEDQEL 120
           L+SGKS+SSCACVSK WLMLLS+IRR                         N    DQEL
Sbjct: 61  LQSGKSRSSCACVSKRWLMLLSSIRRD------------------------NEDRGDQEL 120

Query: 121 ENNGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGLTS 175
           ENNGYLTRHLEGKKA DIRLAAI IG+ NHGGLGKLS++GMNSIC VTNVGLTS
Sbjct: 121 ENNGYLTRHLEGKKATDIRLAAIAIGSINHGGLGKLSVKGMNSICRVTNVGLTS 150

[Close]

BLAST of Lcy06g013350 vs. NCBI nr
Match: XP_038878709.1 (EIN3-binding F-box protein 1-like isoform X1 [Benincasa hispida])

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-51
Identity = 114/174 (65.52%), Postives = 127/174 (72.99%), Query Frame = 0


Query: 1   MVDLGCSVSISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRR 60
           M D    + ISSRMD Y QPSKR RT+FR+ F+R+DFE+  KN SIDDLPDECLFEIF+R
Sbjct: 24  MEDFTYFLPISSRMDVYCQPSKRVRTNFRIPFDRNDFEEEGKNPSIDDLPDECLFEIFKR 83

Query: 61  LRSGKSKSSCACVSKWWLMLLSNIRRAEISNNLFGSSKSEDLCPVFDDIVINSGYEDQEL 120
           L+SGKS+SSCACVSK WLMLLS+IRR                         N    DQEL
Sbjct: 84  LQSGKSRSSCACVSKRWLMLLSSIRRD------------------------NEDRGDQEL 143

Query: 121 ENNGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGLTS 175
           ENNGYLTRHLEGKKA DIRLAAI IG+ NHGGLGKLS++GMNSIC VTNVGLTS
Sbjct: 144 ENNGYLTRHLEGKKATDIRLAAIAIGSINHGGLGKLSVKGMNSICRVTNVGLTS 173

[Close]

BLAST of Lcy06g013350 vs. NCBI nr
Match: XP_022961130.1 (EIN3-binding F-box protein 1-like [Cucurbita moschata])

HSP 1 Score: 195.3 bits (495), Expect = 8.5e-46
Identity = 108/165 (65.45%), Postives = 118/165 (71.52%), Query Frame = 0


Query: 10  ISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRRLRSGKSKSS 69
           ISSRMD YFQP+KRA                     IDDLPDECLFEIF+RL++GKSKS 
Sbjct: 3   ISSRMDVYFQPTKRA---------------------IDDLPDECLFEIFKRLQTGKSKSC 62

Query: 70  CACVSKWWLMLLSNIRRAEISNNLFGSSKSEDLCPVFDDIVINSGYEDQELENNGYLTRH 129
           CACVS+ WLMLLS IRRAE  NN FGSSKS       DD  ++SG       NNGYLTRH
Sbjct: 63  CACVSRRWLMLLSTIRRAENGNNSFGSSKS-------DDTEMSSGC------NNGYLTRH 122

Query: 130 LEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGLTS 175
           LEGK+A DIRLAAI +GTSNHGGLGKLSI+GMNSICG TNVGLTS
Sbjct: 123 LEGKRATDIRLAAIAVGTSNHGGLGKLSIKGMNSICGATNVGLTS 133

[Close]

BLAST of Lcy06g013350 vs. NCBI nr
Match: XP_022987484.1 (EIN3-binding F-box protein 1-like [Cucurbita maxima])

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-45
Identity = 108/174 (62.07%), Postives = 122/174 (70.11%), Query Frame = 0


Query: 1   MVDLGCSVSISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRR 60
           MV+L C + ISSR+D YFQP+KRA                     IDDLPDECLFEIF+R
Sbjct: 17  MVNLSCFMPISSRLDVYFQPTKRA---------------------IDDLPDECLFEIFKR 76

Query: 61  LRSGKSKSSCACVSKWWLMLLSNIRRAEISNNLFGSSKSEDLCPVFDDIVINSGYEDQEL 120
           L++GKSKS CACVS+ WLMLLS IRRAE  NN  GSSKS       DD  ++SG      
Sbjct: 77  LQTGKSKSCCACVSRRWLMLLSTIRRAENGNNSSGSSKS-------DDTEMSSGC----- 136

Query: 121 ENNGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGLTS 175
            NNGYLTR+LEGK+A D RLAAI +GTSNHGGLGKLSI+GMNSICG TNVGLTS
Sbjct: 137 -NNGYLTRYLEGKRATDTRLAAIAVGTSNHGGLGKLSIKGMNSICGATNVGLTS 156

[Close]

BLAST of Lcy06g013350 vs. TAIR 10
Match: AT2G25490.1 (EIN3-binding F box protein 1 )

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-27
Identity = 87/212 (41.04%), Postives = 111/212 (52.36%), Query Frame = 0


Query: 3   DLGCSVSISSRMDGYFQPSKRARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIFRRLR 62
           D    +S+ S  D YF PSKR+R      F  S FE+  K  SID LPDECLFEIFRRL 
Sbjct: 25  DASLLLSLGSFADVYFPPSKRSRVVAPTIF--SAFEK--KPVSIDVLPDECLFEIFRRLS 84

Query: 63  SGKSKSSCACVSKWWLMLLSNIRRAEISNNLFGSSKSEDLCPVFDDIVINSGYEDQELEN 122
             + +S+CA VSK WL L+S+IR+ EI                     + S   +   + 
Sbjct: 85  GPQERSACAFVSKQWLTLVSSIRQKEID--------------------VPSKITEDGDDC 144

Query: 123 NGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTNVGL---------- 182
            G L+R L+GKKA D+RLAAI +GT+  GGLGKLSIRG NS   V+++GL          
Sbjct: 145 EGCLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGSNS-AKVSDLGLRSIGRSCPSL 204

Query: 183 ---------TSTDIRLVVIAVGTTAFHELPIN 196
                    T TD  L+ IA G     +L +N
Sbjct: 205 GSLSLWNVSTITDNGLLEIAEGCAQLEKLELN 211

[Close]

BLAST of Lcy06g013350 vs. TAIR 10
Match: AT5G25350.1 (EIN3-binding F box protein 2 )

HSP 1 Score: 75.5 bits (184), Expect = 9.1e-14
Identity = 44/94 (46.81%), Postives = 59/94 (62.77%), Query Frame = 0


Query: 4   LGCSVSIS-SRMDGYFQPSKR----ARTSFRVAFERSDFEQGAKNASIDDLPDECLFEIF 63
           LG S+ +S     G + P+++    A TSF   FE        K  SID LP+ECLFEI 
Sbjct: 15  LGGSMYLSPGSCPGVYYPARKRLRVAATSFYSGFEE-------KQTSIDVLPEECLFEIL 74

Query: 64  RRLRSGKSKSSCACVSKWWLMLLSNIRRAEISNN 93
           RRL SG+ +S+CACVSK WL LLS+I R+E++ +
Sbjct: 75  RRLPSGQERSACACVSKHWLNLLSSISRSEVNES 101

HSP 2 Score: 65.9 bits (159), Expect = 7.2e-11
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 110 VINSGYEDQELENNGYLTRHLEGKKANDIRLAAIVIGTSNHGGLGKLSIRGMNSICGVTN 169
           V  S  +D E E  G+L+R LEGKKA D+RLAAI +GTS+ GGLGKL IRG      VT+
Sbjct: 98  VNESSVQDVE-EGEGFLSRSLEGKKATDLRLAAIAVGTSSRGGLGKLQIRGSGFESKVTD 157

Query: 170 VGL 173
           VGL
Sbjct: 158 VGL 159

The following BLAST results are available for this feature:

BLAST of Lcy06g013350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKK0	2.0e-26	41.04	EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1	[more]
Q708Y0	1.3e-12	46.81	EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1	[more]

BLAST of Lcy06g013350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CT81	2.8e-63	72.41	EIN3-binding F-box protein 1-like OS=Momordica charantia OX=3673 GN=LOC111014530...	[more]
A0A6J1HB62	4.1e-46	65.45	EIN3-binding F-box protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111461733 ...	[more]
A0A6J1JJ10	5.3e-46	62.07	EIN3-binding F-box protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111485028 PE...	[more]
A0A6J5VI53	5.9e-45	60.34	F-box domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS4682...	[more]
A0A7N2L1S7	1.0e-44	61.27	F-box domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1	[more]

BLAST of Lcy06g013350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145000.1	5.8e-63	72.41	EIN3-binding F-box protein 1-like [Momordica charantia]	[more]
XP_038878710.1	1.3e-51	65.52	EIN3-binding F-box protein 1-like isoform X2 [Benincasa hispida]	[more]
XP_038878709.1	1.3e-51	65.52	EIN3-binding F-box protein 1-like isoform X1 [Benincasa hispida]	[more]
XP_022961130.1	8.5e-46	65.45	EIN3-binding F-box protein 1-like [Cucurbita moschata]	[more]
XP_022987484.1	1.1e-45	62.07	EIN3-binding F-box protein 1-like [Cucurbita maxima]	[more]

BLAST of Lcy06g013350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G25490.1	1.4e-27	41.04	EIN3-binding F box protein 1	[more]
AT5G25350.1	9.1e-14	46.81	EIN3-binding F box protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 46..80 e-value: 1.8E-5 score: 24.5
None	No IPR available	GENE3D	1.20.1280.50		coord: 39..85 e-value: 4.1E-5 score: 25.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..332
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..293
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 244..263
None	No IPR available	PANTHER	PTHR13318	UNCHARACTERIZED	coord: 2..174
None	No IPR available	PANTHER	PTHR13318:SF178	GRR1	coord: 2..174
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 38..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g013350.1	Lcy06g013350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding