Lcy06g012790 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTCTGTTCTTCGATTTCGGAGGGACATACGAGTTCAGATCTGTGACCCCCCTCTCAGATCTGTCTTCTCCTTGCTCCCTCTTCATGAATCTGAGGTATCCTTGTTATCTTCTTTCGTCCCTTGTTTCGGATCTTACTGTTTCTTACGGATCTGACCCTAAAATATGGTTTCTTTGTTTTTTTTTCTTAAGATCCCACCCCATGCCGCTTCAACTTGCCGAGGTTGTCGGCGTTGGGATCTGCATGGTAGGTGATTGGAGCAAAGTGAGGGGTGGGAAGCAGGTAAGTCTTCTTCCCCCTTTGTAACCGACCGATGATGTCCCTCATGCATGCAAGCGACGTTTTCCATTTTTTTCGTAAATAATTTGTGCGTGTAAATTTTTCTCATTATGATCGTTCAGCTTGCTGTTTTTTTTTCTTGTATTCTAACATCACCTCTCGTTTGAGAAATTGGTTGGTTTTTCCTCTGCATGCTTGCTGTTTTTTTTTCCTGTGTTCTAACATCACCTCTCGTTTGAGAAATTGGTTGGTTTTTCCTCTGCATGCTTGCTGTTTTTTTGTATCTGTGTTCTAACCCCCCCCCCCCCCCCCCGAATTGGTTTTCTTATTTCATTTGTTGTTCTGTCCATTATTTGTTATTTGATAATCTTCTGATTATGTTGGTTATAATCCTCCTTCTGTCCATATTCGTTTCCTTCTCATTTCTGTTCTACATCCTGATGACTCTTAGCTCAATTTTTAATTGTCATTTGTGTTCTTGAGGATGATGGTACTGTGCATATTATTTACACGTTATTCATGCTTTCGATTTCTGTCCAAATTGTTAACTTCTAATTTGTCTTGTTCATGCTCATGGTGATGTCCATATTTTTTTGCCTTTTCATGTATCTGATGCTGGTGTCCAAATAATGTGCTTTCTCAAAATGTTCTTCTTCATTTTCGTGTTGACCATATTTTTCATTCTAACTCCCTTGTGAATACATTTGCTTTGCTTCTGCCCATATGCTTGCTTCTCTTTCTTTTGTTTCTATTCTTGGTTGTTCCGTCCATATGTGATTGATTTTGCCTCTGATTTTCTTTGGTGGATTTTATTTTCTGGTTGATACACATGATTTGTTTTTTCTAAATTTGAGAACTTCAATTTAATTATCTTCACCAACTTTGAACAAAGTTCTGTTTTTATGGGAAAATAAAATGCTTGACACTTGCTCCTGAGGCCATGAACTTTTTTTTTTTTTTTGGTTTTTAAGTAACTTAGTTCATTTTCGGTTCGTTTCTGACTAATCCCCTTAATTTGTAGCGATAATCGAGCGAGTGGAGTGGGGTGCTCTGTTCCGACAGAACAAGCAGAAAGCACTCACGGGGACGATGAGGGCGACTGCAACTTCCAAGGGTCGCAGGATTATTACGTCCTAGTTCCTCCGGTCGTTAATCTGGGCGCCGAGGCCGAGTATGAGGACGTCCCTATCACACCCACCAGCCGACTGAGCACAGCAGGGTCCTCGCAGGGACAAAAGAGGAGCCGGGCATCGTACGAAGCAGAAGTGCTTGAAATAATGAGGAAGTCAGTGAACCTGCAAGAGACTCCGTTGACGAAAATTGCAAACTGGCCTGACACGCAGGACACAAGGGAGTTCAAGCGGCGTGACACAGTGGCAGAGATGCTCCTGGCGCAACCAGAGCTAACAGACGACGAGAGAGTGTCCTTAATGCGTATTCTCTTCGTCGACCCCAAAATGACTAACATGATGCTCTCTGTCCCACCGACCCTCAAGCTTCAATTCCTCCGAGGCCTACTGAATGAACGACGGTGA ATGTGTCTGTTCTTCGATTTCGGAGGGACATACGAGTTCAGATCTGTGACCCCCCTCTCAGATCTGTCTTCTCCTTGCTCCCTCTTCATGAATCTGAGCGATAATCGAGCGAGTGGAGTGGGGTGCTCTGTTCCGACAGAACAAGCAGAAAGCACTCACGGGGACGATGAGGGCGACTGCAACTTCCAAGGGTCGCAGGATTATTACGTCCTAGTTCCTCCGGTCGTTAATCTGGGCGCCGAGGCCGAGTATGAGGACGTCCCTATCACACCCACCAGCCGACTGAGCACAGCAGGGTCCTCGCAGGGACAAAAGAGGAGCCGGGCATCGTACGAAGCAGAAGTGCTTGAAATAATGAGGAAGTCAGTGAACCTGCAAGAGACTCCGTTGACGAAAATTGCAAACTGGCCTGACACGCAGGACACAAGGGAGTTCAAGCGGCGTGACACAGTGGCAGAGATGCTCCTGGCGCAACCAGAGCTAACAGACGACGAGAGAGTGTCCTTAATGCGTATTCTCTTCGTCGACCCCAAAATGACTAACATGATGCTCTCTGTCCCACCGACCCTCAAGCTTCAATTCCTCCGAGGCCTACTGAATGAACGACGGTGA ATGTGTCTGTTCTTCGATTTCGGAGGGACATACGAGTTCAGATCTGTGACCCCCCTCTCAGATCTGTCTTCTCCTTGCTCCCTCTTCATGAATCTGAGCGATAATCGAGCGAGTGGAGTGGGGTGCTCTGTTCCGACAGAACAAGCAGAAAGCACTCACGGGGACGATGAGGGCGACTGCAACTTCCAAGGGTCGCAGGATTATTACGTCCTAGTTCCTCCGGTCGTTAATCTGGGCGCCGAGGCCGAGTATGAGGACGTCCCTATCACACCCACCAGCCGACTGAGCACAGCAGGGTCCTCGCAGGGACAAAAGAGGAGCCGGGCATCGTACGAAGCAGAAGTGCTTGAAATAATGAGGAAGTCAGTGAACCTGCAAGAGACTCCGTTGACGAAAATTGCAAACTGGCCTGACACGCAGGACACAAGGGAGTTCAAGCGGCGTGACACAGTGGCAGAGATGCTCCTGGCGCAACCAGAGCTAACAGACGACGAGAGAGTGTCCTTAATGCGTATTCTCTTCGTCGACCCCAAAATGACTAACATGATGCTCTCTGTCCCACCGACCCTCAAGCTTCAATTCCTCCGAGGCCTACTGAATGAACGACGGTGA MCLFFDFGGTYEFRSVTPLSDLSSPCSLFMNLSDNRASGVGCSVPTEQAESTHGDDEGDCNFQGSQDYYVLVPPVVNLGAEAEYEDVPITPTSRLSTAGSSQGQKRSRASYEAEVLEIMRKSVNLQETPLTKIANWPDTQDTREFKRRDTVAEMLLAQPELTDDERVSLMRILFVDPKMTNMMLSVPPTLKLQFLRGLLNERR Homology
BLAST of Lcy06g012790 vs. ExPASy TrEMBL
Match: A0A6J1DW73 (uncharacterized protein LOC111025018 OS=Momordica charantia OX=3673 GN=LOC111025018 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 2.7e-16 Identity = 56/167 (33.53%), Postives = 91/167 (54.49%), Query Frame = 0
BLAST of Lcy06g012790 vs. ExPASy TrEMBL
Match: A0A5A7SWD8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold515G00010 PE=3 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 1.1e-04 Identity = 41/131 (31.30%), Postives = 63/131 (48.09%), Query Frame = 0
BLAST of Lcy06g012790 vs. ExPASy TrEMBL
Match: A0A5A7TDD6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G00890 PE=4 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 3.1e-04 Identity = 42/132 (31.82%), Postives = 60/132 (45.45%), Query Frame = 0
BLAST of Lcy06g012790 vs. ExPASy TrEMBL
Match: A0A5A7UXH8 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G005580 PE=4 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 5.3e-04 Identity = 40/132 (30.30%), Postives = 62/132 (46.97%), Query Frame = 0
BLAST of Lcy06g012790 vs. ExPASy TrEMBL
Match: A0A5A7UPP6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold314G00090 PE=4 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 6.9e-04 Identity = 40/132 (30.30%), Postives = 59/132 (44.70%), Query Frame = 0
BLAST of Lcy06g012790 vs. NCBI nr
Match: XP_022158565.1 (uncharacterized protein LOC111025018 [Momordica charantia]) HSP 1 Score: 95.5 bits (236), Expect = 5.6e-16 Identity = 56/167 (33.53%), Postives = 91/167 (54.49%), Query Frame = 0
BLAST of Lcy06g012790 vs. NCBI nr
Match: XP_038896380.1 (uncharacterized protein LOC120084641 [Benincasa hispida]) HSP 1 Score: 61.6 bits (148), Expect = 8.9e-06 Identity = 37/109 (33.94%), Postives = 64/109 (58.72%), Query Frame = 0
BLAST of Lcy06g012790 vs. NCBI nr
Match: KAA0034843.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 57.0 bits (136), Expect = 2.2e-04 Identity = 41/131 (31.30%), Postives = 63/131 (48.09%), Query Frame = 0
BLAST of Lcy06g012790 vs. NCBI nr
Match: KAA0041444.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK24318.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 55.5 bits (132), Expect = 6.4e-04 Identity = 42/132 (31.82%), Postives = 60/132 (45.45%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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