Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAACACACTAATCCTGGCACACGAGTAGAGTGGAAAATAAAGACTACACAGAGTGAAGGACATGCCATTCTTACTTCTGTTTTTTGGGCCTTTGGACCTTGCATTGAGGCTTTTAAGTATTGTTGGCCTATCATTCAAATAGATGGCACTCACTTATATGGTAAGTATAGAGGAAAGTTATTGATTGCAACTTCGGTTGACTCTAACAGACATTTGCTCCCACTTGCATTTGCCATAGTTGATGAAGAGTGTCGTGACACGTGGGGATGGTTTCTGAAACACCTTAGACAAATTGTTACACACGATGAGGTATGTTTAATTTCAGATCGACATGGTGGTATAATTTCGGCTGTTAATAATCCAAACAATGGATGGACATGGCCTAAATCTCATCATAGATTTTGCTTAGGACATATTGTTAGCAACTTCAATAAAAAATACAAGTCGAAGCAATTGAAAAATTTTGTTTACCGTGCTGGGTGTCAACACCAAGTTCGAAAGTACAACAAGGTTGTCGAAGAGATTAAAGCAATCAATAGCACTTGTATGAACTTCTTCAGTAATATTGGTATTGAGAAGTGGACTCAATCACATGATGAAGGGGTTAGGTATGGGTGGATGACCACTAACCTATCAGAGTGCATCAACGGTGTTCTCAAAGGCGCTCGTATGTTGCCAATCACTGCACTCGCTCAACTTACCTTCTATAGATGTGTAAAATATTTTGAGAGGAGAAGAGAAGAAACCAGAGGCGCTTTGGCTTGA
mRNA sequence
ATGGTGAAACACACTAATCCTGGCACACGAGTAGAGTGGAAAATAAAGACTACACAGAGTGAAGGACATGCCATTCTTACTTCTGTTTTTTGGGCCTTTGGACCTTGCATTGAGGCTTTTAAGTATTGTTGGCCTATCATTCAAATAGATGGCACTCACTTATATGGTAAGTATAGAGGAAAGTTATTGATTGCAACTTCGGTTGACTCTAACAGACATTTGCTCCCACTTGCATTTGCCATAGTTGATGAAGAGTGTCGTGACACGTGGGGATGGTTTCTGAAACACCTTAGACAAATTGTTACACACGATGAGGTATGTTTAATTTCAGATCGACATGGTGGTATAATTTCGGCTGTTAATAATCCAAACAATGGATGGACATGGCCTAAATCTCATCATAGATTTTGCTTAGGACATATTGTTAGCAACTTCAATAAAAAATACAAGTCGAAGCAATTGAAAAATTTTGTTTACCGTGCTGGGTGTCAACACCAAGTTCGAAAGTACAACAAGGTTGTCGAAGAGATTAAAGCAATCAATAGCACTTGTATGAACTTCTTCAGTAATATTGGTATTGAGAAGTGGACTCAATCACATGATGAAGGGGTTAGGTATGGGTGGATGACCACTAACCTATCAGAGTGCATCAACGGTGTTCTCAAAGGCGCTCGTATGTTGCCAATCACTGCACTCGCTCAACTTACCTTCTATAGATGTGTAAAATATTTTGAGAGGAGAAGAGAAGAAACCAGAGGCGCTTTGGCTTGA
Coding sequence (CDS)
ATGGTGAAACACACTAATCCTGGCACACGAGTAGAGTGGAAAATAAAGACTACACAGAGTGAAGGACATGCCATTCTTACTTCTGTTTTTTGGGCCTTTGGACCTTGCATTGAGGCTTTTAAGTATTGTTGGCCTATCATTCAAATAGATGGCACTCACTTATATGGTAAGTATAGAGGAAAGTTATTGATTGCAACTTCGGTTGACTCTAACAGACATTTGCTCCCACTTGCATTTGCCATAGTTGATGAAGAGTGTCGTGACACGTGGGGATGGTTTCTGAAACACCTTAGACAAATTGTTACACACGATGAGGTATGTTTAATTTCAGATCGACATGGTGGTATAATTTCGGCTGTTAATAATCCAAACAATGGATGGACATGGCCTAAATCTCATCATAGATTTTGCTTAGGACATATTGTTAGCAACTTCAATAAAAAATACAAGTCGAAGCAATTGAAAAATTTTGTTTACCGTGCTGGGTGTCAACACCAAGTTCGAAAGTACAACAAGGTTGTCGAAGAGATTAAAGCAATCAATAGCACTTGTATGAACTTCTTCAGTAATATTGGTATTGAGAAGTGGACTCAATCACATGATGAAGGGGTTAGGTATGGGTGGATGACCACTAACCTATCAGAGTGCATCAACGGTGTTCTCAAAGGCGCTCGTATGTTGCCAATCACTGCACTCGCTCAACTTACCTTCTATAGATGTGTAAAATATTTTGAGAGGAGAAGAGAAGAAACCAGAGGCGCTTTGGCTTGA
Protein sequence
MVKHTNPGTRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGKLLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHDEVCLISDRHGGIISAVNNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAINSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRCVKYFERRREETRGALA
Homology
BLAST of Lcy06g012600 vs. ExPASy TrEMBL
Match:
A0A6J1CRF1 (uncharacterized protein LOC111013502 OS=Momordica charantia OX=3673 GN=LOC111013502 PE=4 SV=1)
HSP 1 Score: 353.2 bits (905), Expect = 9.1e-94
Identity = 165/219 (75.34%), Postives = 185/219 (84.47%), Query Frame = 0
Query: 38 EAFKYCWPIIQIDGTHLYGKYRGKLLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHL 97
+AF+ P++QIDGTHLY KY+GKLLIATSVDSN HLLPLAFAIVDEE R TWGWF K+L
Sbjct: 70 KAFQKFRPMLQIDGTHLYIKYKGKLLIATSVDSNGHLLPLAFAIVDEESRQTWGWFFKNL 129
Query: 98 RQIVTHDEVCLISDRHGGIISAVNNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNF 157
R++VTH+E+CLISDRHGGII AVNN +NGWT PKSHHRFCL H+ SN N KYK +LK+
Sbjct: 130 RKVVTHEEICLISDRHGGIIXAVNNLDNGWTGPKSHHRFCLRHVSSNSNHKYKCTELKDL 189
Query: 158 VYRAGCQHQVRKYNKVVEEIKAINSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECI 217
VYRAG Q Q+RKYNK VE IK +NS+CMNFF NI IEKWT SHD G RY W TTNLSECI
Sbjct: 190 VYRAGAQFQIRKYNKEVENIKLLNSSCMNFFRNIEIEKWTLSHDGGCRYEWATTNLSECI 249
Query: 218 NGVLKGARMLPITALAQLTFYRCVKYFERRREETRGALA 257
NGVLK ARMLPITAL +LT YRCVKYFE+RREETR AL+
Sbjct: 250 NGVLKRARMLPITALVELTVYRCVKYFEKRREETRDALS 288
BLAST of Lcy06g012600 vs. ExPASy TrEMBL
Match:
A0A5D3BS92 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00230 PE=4 SV=1)
HSP 1 Score: 342.0 bits (876), Expect = 2.1e-90
Identity = 155/255 (60.78%), Postives = 192/255 (75.29%), Query Frame = 0
Query: 2 VKHTNPGTRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGK 61
V H NPGTRV+W + G I VFWAFGP IE FKYC P+IQIDGTHLYGKY+GK
Sbjct: 234 VVHYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGK 293
Query: 62 LLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVT-HDEVCLISDRHGGIISAV 121
+L A S+D+N H+ PLAFAIV+ E +W WFL LRQ VT D +CLISDRH GI+SA+
Sbjct: 294 MLTALSIDANGHIFPLAFAIVEGENASSWSWFLYALRQYVTDRDGICLISDRHRGILSAI 353
Query: 122 NNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAI 181
NN GW+ P++ HR+CL H+ SNFN KYKSKQLK+ V+RAG QHQ RK+ + ++EIK +
Sbjct: 354 NNEEIGWSEPRAFHRYCLRHVASNFNNKYKSKQLKDLVFRAGNQHQRRKFIRNMKEIKQL 413
Query: 182 NSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRC 241
N C+ FF +I ++KWTQSHD G RYGWMT+N +EC+NGV KGARMLP+T+L +LTFYR
Sbjct: 414 NPECLEFFEDIDLQKWTQSHDNGYRYGWMTSNAAECMNGVFKGARMLPMTSLVRLTFYRT 473
Query: 242 VKYFERRREETRGAL 256
+ YFERRR E A+
Sbjct: 474 ILYFERRRAEISEAV 488
BLAST of Lcy06g012600 vs. ExPASy TrEMBL
Match:
A0A5A7TN56 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00290 PE=4 SV=1)
HSP 1 Score: 342.0 bits (876), Expect = 2.1e-90
Identity = 155/255 (60.78%), Postives = 192/255 (75.29%), Query Frame = 0
Query: 2 VKHTNPGTRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGK 61
V H NPGTRV+W + G I VFWAFGP IE FKYC P+IQIDGTHLYGKY+GK
Sbjct: 234 VVHYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGK 293
Query: 62 LLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVT-HDEVCLISDRHGGIISAV 121
+L A S+D+N H+ PLAFAIV+ E +W WFL LRQ VT D +CLISDRH GI+SA+
Sbjct: 294 MLTALSIDANGHIFPLAFAIVEGENASSWSWFLYALRQYVTDRDGICLISDRHRGILSAI 353
Query: 122 NNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAI 181
NN GW+ P++ HR+CL H+ SNFN KYKSKQLK+ V+RAG QHQ RK+ + ++EIK +
Sbjct: 354 NNEEIGWSEPRAFHRYCLRHVASNFNNKYKSKQLKDLVFRAGNQHQRRKFIRNMKEIKQL 413
Query: 182 NSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRC 241
N C+ FF +I ++KWTQSHD G RYGWMT+N +EC+NGV KGARMLP+T+L +LTFYR
Sbjct: 414 NPECLEFFEDIDLQKWTQSHDNGYRYGWMTSNAAECMNGVFKGARMLPMTSLVRLTFYRT 473
Query: 242 VKYFERRREETRGAL 256
+ YFERRR E A+
Sbjct: 474 ILYFERRRAEISEAV 488
BLAST of Lcy06g012600 vs. ExPASy TrEMBL
Match:
A5BJW1 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_008825 PE=4 SV=1)
HSP 1 Score: 337.8 bits (865), Expect = 3.9e-89
Identity = 158/254 (62.20%), Postives = 190/254 (74.80%), Query Frame = 0
Query: 5 TNPGTRVEWK-IKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGKLL 64
TNPGT+V WK I G+ VFWAFG +E FK+C PIIQIDGT LYGKY GKLL
Sbjct: 259 TNPGTKVVWKTIPLGGISGNVRFMRVFWAFGASVEGFKHCRPIIQIDGTFLYGKYMGKLL 318
Query: 65 IATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHDE-VCLISDRHGGIISAVNN 124
IATS+D N H+ PLAFAIV+EE +D+W WFL LR VT E +CLISDRH GI +AV N
Sbjct: 319 IATSIDGNGHVFPLAFAIVEEESQDSWSWFLIALRHHVTQREGICLISDRHAGINAAVRN 378
Query: 125 PNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAINS 184
P+ GW+ P + HR+CL H+VSNFN K+K+K LK YRAGCQHQ RKY + +EE+K ++
Sbjct: 379 PSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAGCQHQPRKYERYMEELKRLDE 438
Query: 185 TCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRCVK 244
+ +FS + +KWTQ++D G RYGWMTTN++ECINGVLKGARMLPITAL QLTFYRCV
Sbjct: 439 KSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLKGARMLPITALVQLTFYRCVS 498
Query: 245 YFERRREETRGALA 257
YFE RR E R +A
Sbjct: 499 YFETRRAEIRARMA 512
BLAST of Lcy06g012600 vs. ExPASy TrEMBL
Match:
A0A438HFK5 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_044939 PE=4 SV=1)
HSP 1 Score: 337.8 bits (865), Expect = 3.9e-89
Identity = 158/254 (62.20%), Postives = 190/254 (74.80%), Query Frame = 0
Query: 5 TNPGTRVEWK-IKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGKLL 64
TNPGT+V WK I G+ VFWAFG +E FK+C PIIQIDGT LYGKY GKLL
Sbjct: 413 TNPGTKVVWKTIPLGGISGNVRFMRVFWAFGASVEGFKHCRPIIQIDGTFLYGKYMGKLL 472
Query: 65 IATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHDE-VCLISDRHGGIISAVNN 124
IATS+D N H+ PLAFAIV+EE +D+W WFL LR VT E +CLISDRH GI +AV N
Sbjct: 473 IATSIDGNGHVFPLAFAIVEEESQDSWSWFLIALRHHVTQREGICLISDRHAGINAAVRN 532
Query: 125 PNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAINS 184
P+ GW+ P + HR+CL H+VSNFN K+K+K LK YRAGCQHQ RKY + +EE+K ++
Sbjct: 533 PSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAGCQHQPRKYERYMEELKRLDE 592
Query: 185 TCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRCVK 244
+ +FS + +KWTQ++D G RYGWMTTN++ECINGVLKGARMLPITAL QLTFYRCV
Sbjct: 593 KSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLKGARMLPITALVQLTFYRCVS 652
Query: 245 YFERRREETRGALA 257
YFE RR E R +A
Sbjct: 653 YFETRRAEIRARMA 666
BLAST of Lcy06g012600 vs. NCBI nr
Match:
XP_022143642.1 (uncharacterized protein LOC111013502 [Momordica charantia])
HSP 1 Score: 353.2 bits (905), Expect = 1.9e-93
Identity = 165/219 (75.34%), Postives = 185/219 (84.47%), Query Frame = 0
Query: 38 EAFKYCWPIIQIDGTHLYGKYRGKLLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHL 97
+AF+ P++QIDGTHLY KY+GKLLIATSVDSN HLLPLAFAIVDEE R TWGWF K+L
Sbjct: 70 KAFQKFRPMLQIDGTHLYIKYKGKLLIATSVDSNGHLLPLAFAIVDEESRQTWGWFFKNL 129
Query: 98 RQIVTHDEVCLISDRHGGIISAVNNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNF 157
R++VTH+E+CLISDRHGGII AVNN +NGWT PKSHHRFCL H+ SN N KYK +LK+
Sbjct: 130 RKVVTHEEICLISDRHGGIIXAVNNLDNGWTGPKSHHRFCLRHVSSNSNHKYKCTELKDL 189
Query: 158 VYRAGCQHQVRKYNKVVEEIKAINSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECI 217
VYRAG Q Q+RKYNK VE IK +NS+CMNFF NI IEKWT SHD G RY W TTNLSECI
Sbjct: 190 VYRAGAQFQIRKYNKEVENIKLLNSSCMNFFRNIEIEKWTLSHDGGCRYEWATTNLSECI 249
Query: 218 NGVLKGARMLPITALAQLTFYRCVKYFERRREETRGALA 257
NGVLK ARMLPITAL +LT YRCVKYFE+RREETR AL+
Sbjct: 250 NGVLKRARMLPITALVELTVYRCVKYFEKRREETRDALS 288
BLAST of Lcy06g012600 vs. NCBI nr
Match:
KAA0044308.1 (uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa])
HSP 1 Score: 342.0 bits (876), Expect = 4.3e-90
Identity = 155/255 (60.78%), Postives = 192/255 (75.29%), Query Frame = 0
Query: 2 VKHTNPGTRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGK 61
V H NPGTRV+W + G I VFWAFGP IE FKYC P+IQIDGTHLYGKY+GK
Sbjct: 234 VVHYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGK 293
Query: 62 LLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVT-HDEVCLISDRHGGIISAV 121
+L A S+D+N H+ PLAFAIV+ E +W WFL LRQ VT D +CLISDRH GI+SA+
Sbjct: 294 MLTALSIDANGHIFPLAFAIVEGENASSWSWFLYALRQYVTDRDGICLISDRHRGILSAI 353
Query: 122 NNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAI 181
NN GW+ P++ HR+CL H+ SNFN KYKSKQLK+ V+RAG QHQ RK+ + ++EIK +
Sbjct: 354 NNEEIGWSEPRAFHRYCLRHVASNFNNKYKSKQLKDLVFRAGNQHQRRKFIRNMKEIKQL 413
Query: 182 NSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRC 241
N C+ FF +I ++KWTQSHD G RYGWMT+N +EC+NGV KGARMLP+T+L +LTFYR
Sbjct: 414 NPECLEFFEDIDLQKWTQSHDNGYRYGWMTSNAAECMNGVFKGARMLPMTSLVRLTFYRT 473
Query: 242 VKYFERRREETRGAL 256
+ YFERRR E A+
Sbjct: 474 ILYFERRRAEISEAV 488
BLAST of Lcy06g012600 vs. NCBI nr
Match:
TYK02543.1 (uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa])
HSP 1 Score: 342.0 bits (876), Expect = 4.3e-90
Identity = 155/255 (60.78%), Postives = 192/255 (75.29%), Query Frame = 0
Query: 2 VKHTNPGTRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGK 61
V H NPGTRV+W + G I VFWAFGP IE FKYC P+IQIDGTHLYGKY+GK
Sbjct: 234 VVHYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGK 293
Query: 62 LLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVT-HDEVCLISDRHGGIISAV 121
+L A S+D+N H+ PLAFAIV+ E +W WFL LRQ VT D +CLISDRH GI+SA+
Sbjct: 294 MLTALSIDANGHIFPLAFAIVEGENASSWSWFLYALRQYVTDRDGICLISDRHRGILSAI 353
Query: 122 NNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAI 181
NN GW+ P++ HR+CL H+ SNFN KYKSKQLK+ V+RAG QHQ RK+ + ++EIK +
Sbjct: 354 NNEEIGWSEPRAFHRYCLRHVASNFNNKYKSKQLKDLVFRAGNQHQRRKFIRNMKEIKQL 413
Query: 182 NSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRC 241
N C+ FF +I ++KWTQSHD G RYGWMT+N +EC+NGV KGARMLP+T+L +LTFYR
Sbjct: 414 NPECLEFFEDIDLQKWTQSHDNGYRYGWMTSNAAECMNGVFKGARMLPMTSLVRLTFYRT 473
Query: 242 VKYFERRREETRGAL 256
+ YFERRR E A+
Sbjct: 474 ILYFERRRAEISEAV 488
BLAST of Lcy06g012600 vs. NCBI nr
Match:
RVW83159.1 (hypothetical protein CK203_044939 [Vitis vinifera])
HSP 1 Score: 337.8 bits (865), Expect = 8.1e-89
Identity = 158/254 (62.20%), Postives = 190/254 (74.80%), Query Frame = 0
Query: 5 TNPGTRVEWK-IKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGKLL 64
TNPGT+V WK I G+ VFWAFG +E FK+C PIIQIDGT LYGKY GKLL
Sbjct: 413 TNPGTKVVWKTIPLGGISGNVRFMRVFWAFGASVEGFKHCRPIIQIDGTFLYGKYMGKLL 472
Query: 65 IATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHDE-VCLISDRHGGIISAVNN 124
IATS+D N H+ PLAFAIV+EE +D+W WFL LR VT E +CLISDRH GI +AV N
Sbjct: 473 IATSIDGNGHVFPLAFAIVEEESQDSWSWFLIALRHHVTQREGICLISDRHAGINAAVRN 532
Query: 125 PNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAINS 184
P+ GW+ P + HR+CL H+VSNFN K+K+K LK YRAGCQHQ RKY + +EE+K ++
Sbjct: 533 PSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAGCQHQPRKYERYMEELKRLDE 592
Query: 185 TCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRCVK 244
+ +FS + +KWTQ++D G RYGWMTTN++ECINGVLKGARMLPITAL QLTFYRCV
Sbjct: 593 KSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLKGARMLPITALVQLTFYRCVS 652
Query: 245 YFERRREETRGALA 257
YFE RR E R +A
Sbjct: 653 YFETRRAEIRARMA 666
BLAST of Lcy06g012600 vs. NCBI nr
Match:
CAN72427.1 (hypothetical protein VITISV_008825 [Vitis vinifera])
HSP 1 Score: 337.8 bits (865), Expect = 8.1e-89
Identity = 158/254 (62.20%), Postives = 190/254 (74.80%), Query Frame = 0
Query: 5 TNPGTRVEWK-IKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGKLL 64
TNPGT+V WK I G+ VFWAFG +E FK+C PIIQIDGT LYGKY GKLL
Sbjct: 259 TNPGTKVVWKTIPLGGISGNVRFMRVFWAFGASVEGFKHCRPIIQIDGTFLYGKYMGKLL 318
Query: 65 IATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHDE-VCLISDRHGGIISAVNN 124
IATS+D N H+ PLAFAIV+EE +D+W WFL LR VT E +CLISDRH GI +AV N
Sbjct: 319 IATSIDGNGHVFPLAFAIVEEESQDSWSWFLIALRHHVTQREGICLISDRHAGINAAVRN 378
Query: 125 PNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAINS 184
P+ GW+ P + HR+CL H+VSNFN K+K+K LK YRAGCQHQ RKY + +EE+K ++
Sbjct: 379 PSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAGCQHQPRKYERYMEELKRLDE 438
Query: 185 TCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRCVK 244
+ +FS + +KWTQ++D G RYGWMTTN++ECINGVLKGARMLPITAL QLTFYRCV
Sbjct: 439 KSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLKGARMLPITALVQLTFYRCVS 498
Query: 245 YFERRREETRGALA 257
YFE RR E R +A
Sbjct: 499 YFETRRAEIRARMA 512
BLAST of Lcy06g012600 vs. TAIR 10
Match:
AT1G64260.1 (MuDR family transposase )
HSP 1 Score: 157.9 bits (398), Expect = 1.1e-38
Identity = 74/205 (36.10%), Postives = 114/205 (55.61%), Query Frame = 0
Query: 4 HTNPGTRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGKLL 63
H++ G V+W+ + A VFW+F IE F++C P+I +D L GKY+ KL+
Sbjct: 336 HSSNGLLVDWQYDLFPNPDFASFRGVFWSFSQSIEGFQHCRPLIVVDTKSLNGKYQLKLM 395
Query: 64 IATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVT-HDEVCLISDRHGGIISAVNN 123
IA+ VD+ PLAFA+ E D+W WF +R+ VT ++CLIS I++ VN
Sbjct: 396 IASGVDAANKFFPLAFAVTKEVSTDSWRWFFTKIREKVTQRKDLCLISSPLRDIVAVVNE 455
Query: 124 PNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAINS 183
P + W P +HH+FCL H+ S F ++ L++ V +AG +Q +++ + +IK N
Sbjct: 456 PGSLWQEPWAHHKFCLNHLRSQFLGVFRDYNLESLVEQAGSTNQKEEFDSYMNDIKEKNP 515
Query: 184 TCMNFFSNIGIEKWTQSHDEGVRYG 208
+ I KW +HD G+RYG
Sbjct: 516 EAWKWLDQIPRHKWALAHDSGLRYG 540
BLAST of Lcy06g012600 vs. TAIR 10
Match:
AT1G49920.1 (MuDR family transposase )
HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 83/258 (32.17%), Postives = 132/258 (51.16%), Query Frame = 0
Query: 2 VKHTNPGTRVEWKIKT-TQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRG 61
V H++ G V+W+ + T HA +FWAF I+ F++C P+I +D +L GKY+
Sbjct: 336 VLHSSNGLLVDWQYDSLTHDPEHASFRGLFWAFSQSIQGFQHCRPLIVVDTKNLGGKYKM 395
Query: 62 KLLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHDE-VCLISDRHGGIISA 121
KL+IA++ D+ PLAFA+ E D+W WFL +R+ VT + +CLIS I++
Sbjct: 396 KLMIASAFDATNQYFPLAFAVTKEVSVDSWRWFLTRIREKVTQRQGICLISSPDPDILAV 455
Query: 122 VNNPNNGWTWPKSHHRFCLGHIVSNFNKKYK--SKQLKNFVYRAGCQHQVRKYNKVVEEI 181
+N P + W P ++HRFCL H+ S + V AG Q +++ ++EI
Sbjct: 456 INEPGSQWKEPWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVDEAGSSSQKEEFDSYMKEI 515
Query: 182 KAINSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTF 241
K N + +W +HD+G RYG M + +E + V K R + + L F
Sbjct: 516 KERNPEAWKWLDQFPPHQWALAHDDGRRYGIMRID-TEALFAVCKRFRKVAMAGGVMLLF 575
Query: 242 YRCVKYFERRREETRGAL 256
+ F + +RG+L
Sbjct: 576 GQLKDAFAESFKLSRGSL 592
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CRF1 | 9.1e-94 | 75.34 | uncharacterized protein LOC111013502 OS=Momordica charantia OX=3673 GN=LOC111013... | [more] |
A0A5D3BS92 | 2.1e-90 | 60.78 | SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... | [more] |
A0A5A7TN56 | 2.1e-90 | 60.78 | SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... | [more] |
A5BJW1 | 3.9e-89 | 62.20 | SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_008825 ... | [more] |
A0A438HFK5 | 3.9e-89 | 62.20 | SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_044939 P... | [more] |
Match Name | E-value | Identity | Description | |
XP_022143642.1 | 1.9e-93 | 75.34 | uncharacterized protein LOC111013502 [Momordica charantia] | [more] |
KAA0044308.1 | 4.3e-90 | 60.78 | uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa] | [more] |
TYK02543.1 | 4.3e-90 | 60.78 | uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa] | [more] |
RVW83159.1 | 8.1e-89 | 62.20 | hypothetical protein CK203_044939 [Vitis vinifera] | [more] |
CAN72427.1 | 8.1e-89 | 62.20 | hypothetical protein VITISV_008825 [Vitis vinifera] | [more] |