Lcy06g012600 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g012600
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	SWIM-type domain-containing protein
Location	Chr06: 16554356 .. 16555126 (+)
RNA-Seq Expression	Lcy06g012600
Synteny	Lcy06g012600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAACACACTAATCCTGGCACACGAGTAGAGTGGAAAATAAAGACTACACAGAGTGAAGGACATGCCATTCTTACTTCTGTTTTTTGGGCCTTTGGACCTTGCATTGAGGCTTTTAAGTATTGTTGGCCTATCATTCAAATAGATGGCACTCACTTATATGGTAAGTATAGAGGAAAGTTATTGATTGCAACTTCGGTTGACTCTAACAGACATTTGCTCCCACTTGCATTTGCCATAGTTGATGAAGAGTGTCGTGACACGTGGGGATGGTTTCTGAAACACCTTAGACAAATTGTTACACACGATGAGGTATGTTTAATTTCAGATCGACATGGTGGTATAATTTCGGCTGTTAATAATCCAAACAATGGATGGACATGGCCTAAATCTCATCATAGATTTTGCTTAGGACATATTGTTAGCAACTTCAATAAAAAATACAAGTCGAAGCAATTGAAAAATTTTGTTTACCGTGCTGGGTGTCAACACCAAGTTCGAAAGTACAACAAGGTTGTCGAAGAGATTAAAGCAATCAATAGCACTTGTATGAACTTCTTCAGTAATATTGGTATTGAGAAGTGGACTCAATCACATGATGAAGGGGTTAGGTATGGGTGGATGACCACTAACCTATCAGAGTGCATCAACGGTGTTCTCAAAGGCGCTCGTATGTTGCCAATCACTGCACTCGCTCAACTTACCTTCTATAGATGTGTAAAATATTTTGAGAGGAGAAGAGAAGAAACCAGAGGCGCTTTGGCTTGA

mRNA sequence

ATGGTGAAACACACTAATCCTGGCACACGAGTAGAGTGGAAAATAAAGACTACACAGAGTGAAGGACATGCCATTCTTACTTCTGTTTTTTGGGCCTTTGGACCTTGCATTGAGGCTTTTAAGTATTGTTGGCCTATCATTCAAATAGATGGCACTCACTTATATGGTAAGTATAGAGGAAAGTTATTGATTGCAACTTCGGTTGACTCTAACAGACATTTGCTCCCACTTGCATTTGCCATAGTTGATGAAGAGTGTCGTGACACGTGGGGATGGTTTCTGAAACACCTTAGACAAATTGTTACACACGATGAGGTATGTTTAATTTCAGATCGACATGGTGGTATAATTTCGGCTGTTAATAATCCAAACAATGGATGGACATGGCCTAAATCTCATCATAGATTTTGCTTAGGACATATTGTTAGCAACTTCAATAAAAAATACAAGTCGAAGCAATTGAAAAATTTTGTTTACCGTGCTGGGTGTCAACACCAAGTTCGAAAGTACAACAAGGTTGTCGAAGAGATTAAAGCAATCAATAGCACTTGTATGAACTTCTTCAGTAATATTGGTATTGAGAAGTGGACTCAATCACATGATGAAGGGGTTAGGTATGGGTGGATGACCACTAACCTATCAGAGTGCATCAACGGTGTTCTCAAAGGCGCTCGTATGTTGCCAATCACTGCACTCGCTCAACTTACCTTCTATAGATGTGTAAAATATTTTGAGAGGAGAAGAGAAGAAACCAGAGGCGCTTTGGCTTGA

Coding sequence (CDS)

ATGGTGAAACACACTAATCCTGGCACACGAGTAGAGTGGAAAATAAAGACTACACAGAGTGAAGGACATGCCATTCTTACTTCTGTTTTTTGGGCCTTTGGACCTTGCATTGAGGCTTTTAAGTATTGTTGGCCTATCATTCAAATAGATGGCACTCACTTATATGGTAAGTATAGAGGAAAGTTATTGATTGCAACTTCGGTTGACTCTAACAGACATTTGCTCCCACTTGCATTTGCCATAGTTGATGAAGAGTGTCGTGACACGTGGGGATGGTTTCTGAAACACCTTAGACAAATTGTTACACACGATGAGGTATGTTTAATTTCAGATCGACATGGTGGTATAATTTCGGCTGTTAATAATCCAAACAATGGATGGACATGGCCTAAATCTCATCATAGATTTTGCTTAGGACATATTGTTAGCAACTTCAATAAAAAATACAAGTCGAAGCAATTGAAAAATTTTGTTTACCGTGCTGGGTGTCAACACCAAGTTCGAAAGTACAACAAGGTTGTCGAAGAGATTAAAGCAATCAATAGCACTTGTATGAACTTCTTCAGTAATATTGGTATTGAGAAGTGGACTCAATCACATGATGAAGGGGTTAGGTATGGGTGGATGACCACTAACCTATCAGAGTGCATCAACGGTGTTCTCAAAGGCGCTCGTATGTTGCCAATCACTGCACTCGCTCAACTTACCTTCTATAGATGTGTAAAATATTTTGAGAGGAGAAGAGAAGAAACCAGAGGCGCTTTGGCTTGA

Protein sequence

MVKHTNPGTRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGKLLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHDEVCLISDRHGGIISAVNNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAINSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRCVKYFERRREETRGALA

Homology

[Close]

BLAST of Lcy06g012600 vs. ExPASy TrEMBL
Match: A0A6J1CRF1 (uncharacterized protein LOC111013502 OS=Momordica charantia OX=3673 GN=LOC111013502 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 9.1e-94
Identity = 165/219 (75.34%), Postives = 185/219 (84.47%), Query Frame = 0


Query: 38  EAFKYCWPIIQIDGTHLYGKYRGKLLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHL 97
           +AF+   P++QIDGTHLY KY+GKLLIATSVDSN HLLPLAFAIVDEE R TWGWF K+L
Sbjct: 70  KAFQKFRPMLQIDGTHLYIKYKGKLLIATSVDSNGHLLPLAFAIVDEESRQTWGWFFKNL 129

Query: 98  RQIVTHDEVCLISDRHGGIISAVNNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNF 157
           R++VTH+E+CLISDRHGGII AVNN +NGWT PKSHHRFCL H+ SN N KYK  +LK+ 
Sbjct: 130 RKVVTHEEICLISDRHGGIIXAVNNLDNGWTGPKSHHRFCLRHVSSNSNHKYKCTELKDL 189

Query: 158 VYRAGCQHQVRKYNKVVEEIKAINSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECI 217
           VYRAG Q Q+RKYNK VE IK +NS+CMNFF NI IEKWT SHD G RY W TTNLSECI
Sbjct: 190 VYRAGAQFQIRKYNKEVENIKLLNSSCMNFFRNIEIEKWTLSHDGGCRYEWATTNLSECI 249

Query: 218 NGVLKGARMLPITALAQLTFYRCVKYFERRREETRGALA 257
           NGVLK ARMLPITAL +LT YRCVKYFE+RREETR AL+
Sbjct: 250 NGVLKRARMLPITALVELTVYRCVKYFEKRREETRDALS 288

[Close]

BLAST of Lcy06g012600 vs. ExPASy TrEMBL
Match: A0A5D3BS92 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00230 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 2.1e-90
Identity = 155/255 (60.78%), Postives = 192/255 (75.29%), Query Frame = 0


Query: 2   VKHTNPGTRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGK 61
           V H NPGTRV+W    +   G  I   VFWAFGP IE FKYC P+IQIDGTHLYGKY+GK
Sbjct: 234 VVHYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGK 293

Query: 62  LLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVT-HDEVCLISDRHGGIISAV 121
           +L A S+D+N H+ PLAFAIV+ E   +W WFL  LRQ VT  D +CLISDRH GI+SA+
Sbjct: 294 MLTALSIDANGHIFPLAFAIVEGENASSWSWFLYALRQYVTDRDGICLISDRHRGILSAI 353

Query: 122 NNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAI 181
           NN   GW+ P++ HR+CL H+ SNFN KYKSKQLK+ V+RAG QHQ RK+ + ++EIK +
Sbjct: 354 NNEEIGWSEPRAFHRYCLRHVASNFNNKYKSKQLKDLVFRAGNQHQRRKFIRNMKEIKQL 413

Query: 182 NSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRC 241
           N  C+ FF +I ++KWTQSHD G RYGWMT+N +EC+NGV KGARMLP+T+L +LTFYR 
Sbjct: 414 NPECLEFFEDIDLQKWTQSHDNGYRYGWMTSNAAECMNGVFKGARMLPMTSLVRLTFYRT 473

Query: 242 VKYFERRREETRGAL 256
           + YFERRR E   A+
Sbjct: 474 ILYFERRRAEISEAV 488

[Close]

BLAST of Lcy06g012600 vs. ExPASy TrEMBL
Match: A0A5A7TN56 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00290 PE=4 SV=1)

HSP 1 Score: 342.0 bits (876), Expect = 2.1e-90
Identity = 155/255 (60.78%), Postives = 192/255 (75.29%), Query Frame = 0


Query: 2   VKHTNPGTRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGK 61
           V H NPGTRV+W    +   G  I   VFWAFGP IE FKYC P+IQIDGTHLYGKY+GK
Sbjct: 234 VVHYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGK 293

Query: 62  LLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVT-HDEVCLISDRHGGIISAV 121
           +L A S+D+N H+ PLAFAIV+ E   +W WFL  LRQ VT  D +CLISDRH GI+SA+
Sbjct: 294 MLTALSIDANGHIFPLAFAIVEGENASSWSWFLYALRQYVTDRDGICLISDRHRGILSAI 353

Query: 122 NNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAI 181
           NN   GW+ P++ HR+CL H+ SNFN KYKSKQLK+ V+RAG QHQ RK+ + ++EIK +
Sbjct: 354 NNEEIGWSEPRAFHRYCLRHVASNFNNKYKSKQLKDLVFRAGNQHQRRKFIRNMKEIKQL 413

Query: 182 NSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRC 241
           N  C+ FF +I ++KWTQSHD G RYGWMT+N +EC+NGV KGARMLP+T+L +LTFYR 
Sbjct: 414 NPECLEFFEDIDLQKWTQSHDNGYRYGWMTSNAAECMNGVFKGARMLPMTSLVRLTFYRT 473

Query: 242 VKYFERRREETRGAL 256
           + YFERRR E   A+
Sbjct: 474 ILYFERRRAEISEAV 488

[Close]

BLAST of Lcy06g012600 vs. ExPASy TrEMBL
Match: A5BJW1 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_008825 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.9e-89
Identity = 158/254 (62.20%), Postives = 190/254 (74.80%), Query Frame = 0


Query: 5   TNPGTRVEWK-IKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGKLL 64
           TNPGT+V WK I      G+     VFWAFG  +E FK+C PIIQIDGT LYGKY GKLL
Sbjct: 259 TNPGTKVVWKTIPLGGISGNVRFMRVFWAFGASVEGFKHCRPIIQIDGTFLYGKYMGKLL 318

Query: 65  IATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHDE-VCLISDRHGGIISAVNN 124
           IATS+D N H+ PLAFAIV+EE +D+W WFL  LR  VT  E +CLISDRH GI +AV N
Sbjct: 319 IATSIDGNGHVFPLAFAIVEEESQDSWSWFLIALRHHVTQREGICLISDRHAGINAAVRN 378

Query: 125 PNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAINS 184
           P+ GW+ P + HR+CL H+VSNFN K+K+K LK   YRAGCQHQ RKY + +EE+K ++ 
Sbjct: 379 PSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAGCQHQPRKYERYMEELKRLDE 438

Query: 185 TCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRCVK 244
             + +FS +  +KWTQ++D G RYGWMTTN++ECINGVLKGARMLPITAL QLTFYRCV 
Sbjct: 439 KSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLKGARMLPITALVQLTFYRCVS 498

Query: 245 YFERRREETRGALA 257
           YFE RR E R  +A
Sbjct: 499 YFETRRAEIRARMA 512

[Close]

BLAST of Lcy06g012600 vs. ExPASy TrEMBL
Match: A0A438HFK5 (SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_044939 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 3.9e-89
Identity = 158/254 (62.20%), Postives = 190/254 (74.80%), Query Frame = 0


Query: 5   TNPGTRVEWK-IKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGKLL 64
           TNPGT+V WK I      G+     VFWAFG  +E FK+C PIIQIDGT LYGKY GKLL
Sbjct: 413 TNPGTKVVWKTIPLGGISGNVRFMRVFWAFGASVEGFKHCRPIIQIDGTFLYGKYMGKLL 472

Query: 65  IATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHDE-VCLISDRHGGIISAVNN 124
           IATS+D N H+ PLAFAIV+EE +D+W WFL  LR  VT  E +CLISDRH GI +AV N
Sbjct: 473 IATSIDGNGHVFPLAFAIVEEESQDSWSWFLIALRHHVTQREGICLISDRHAGINAAVRN 532

Query: 125 PNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAINS 184
           P+ GW+ P + HR+CL H+VSNFN K+K+K LK   YRAGCQHQ RKY + +EE+K ++ 
Sbjct: 533 PSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAGCQHQPRKYERYMEELKRLDE 592

Query: 185 TCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRCVK 244
             + +FS +  +KWTQ++D G RYGWMTTN++ECINGVLKGARMLPITAL QLTFYRCV 
Sbjct: 593 KSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLKGARMLPITALVQLTFYRCVS 652

Query: 245 YFERRREETRGALA 257
           YFE RR E R  +A
Sbjct: 653 YFETRRAEIRARMA 666

[Close]

BLAST of Lcy06g012600 vs. NCBI nr
Match: XP_022143642.1 (uncharacterized protein LOC111013502 [Momordica charantia])

HSP 1 Score: 353.2 bits (905), Expect = 1.9e-93
Identity = 165/219 (75.34%), Postives = 185/219 (84.47%), Query Frame = 0


Query: 38  EAFKYCWPIIQIDGTHLYGKYRGKLLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHL 97
           +AF+   P++QIDGTHLY KY+GKLLIATSVDSN HLLPLAFAIVDEE R TWGWF K+L
Sbjct: 70  KAFQKFRPMLQIDGTHLYIKYKGKLLIATSVDSNGHLLPLAFAIVDEESRQTWGWFFKNL 129

Query: 98  RQIVTHDEVCLISDRHGGIISAVNNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNF 157
           R++VTH+E+CLISDRHGGII AVNN +NGWT PKSHHRFCL H+ SN N KYK  +LK+ 
Sbjct: 130 RKVVTHEEICLISDRHGGIIXAVNNLDNGWTGPKSHHRFCLRHVSSNSNHKYKCTELKDL 189

Query: 158 VYRAGCQHQVRKYNKVVEEIKAINSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECI 217
           VYRAG Q Q+RKYNK VE IK +NS+CMNFF NI IEKWT SHD G RY W TTNLSECI
Sbjct: 190 VYRAGAQFQIRKYNKEVENIKLLNSSCMNFFRNIEIEKWTLSHDGGCRYEWATTNLSECI 249

Query: 218 NGVLKGARMLPITALAQLTFYRCVKYFERRREETRGALA 257
           NGVLK ARMLPITAL +LT YRCVKYFE+RREETR AL+
Sbjct: 250 NGVLKRARMLPITALVELTVYRCVKYFEKRREETRDALS 288

[Close]

BLAST of Lcy06g012600 vs. NCBI nr
Match: KAA0044308.1 (uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 342.0 bits (876), Expect = 4.3e-90
Identity = 155/255 (60.78%), Postives = 192/255 (75.29%), Query Frame = 0


Query: 2   VKHTNPGTRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGK 61
           V H NPGTRV+W    +   G  I   VFWAFGP IE FKYC P+IQIDGTHLYGKY+GK
Sbjct: 234 VVHYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGK 293

Query: 62  LLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVT-HDEVCLISDRHGGIISAV 121
           +L A S+D+N H+ PLAFAIV+ E   +W WFL  LRQ VT  D +CLISDRH GI+SA+
Sbjct: 294 MLTALSIDANGHIFPLAFAIVEGENASSWSWFLYALRQYVTDRDGICLISDRHRGILSAI 353

Query: 122 NNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAI 181
           NN   GW+ P++ HR+CL H+ SNFN KYKSKQLK+ V+RAG QHQ RK+ + ++EIK +
Sbjct: 354 NNEEIGWSEPRAFHRYCLRHVASNFNNKYKSKQLKDLVFRAGNQHQRRKFIRNMKEIKQL 413

Query: 182 NSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRC 241
           N  C+ FF +I ++KWTQSHD G RYGWMT+N +EC+NGV KGARMLP+T+L +LTFYR 
Sbjct: 414 NPECLEFFEDIDLQKWTQSHDNGYRYGWMTSNAAECMNGVFKGARMLPMTSLVRLTFYRT 473

Query: 242 VKYFERRREETRGAL 256
           + YFERRR E   A+
Sbjct: 474 ILYFERRRAEISEAV 488

[Close]

BLAST of Lcy06g012600 vs. NCBI nr
Match: TYK02543.1 (uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 342.0 bits (876), Expect = 4.3e-90
Identity = 155/255 (60.78%), Postives = 192/255 (75.29%), Query Frame = 0


Query: 2   VKHTNPGTRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGK 61
           V H NPGTRV+W    +   G  I   VFWAFGP IE FKYC P+IQIDGTHLYGKY+GK
Sbjct: 234 VVHYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGK 293

Query: 62  LLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVT-HDEVCLISDRHGGIISAV 121
           +L A S+D+N H+ PLAFAIV+ E   +W WFL  LRQ VT  D +CLISDRH GI+SA+
Sbjct: 294 MLTALSIDANGHIFPLAFAIVEGENASSWSWFLYALRQYVTDRDGICLISDRHRGILSAI 353

Query: 122 NNPNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAI 181
           NN   GW+ P++ HR+CL H+ SNFN KYKSKQLK+ V+RAG QHQ RK+ + ++EIK +
Sbjct: 354 NNEEIGWSEPRAFHRYCLRHVASNFNNKYKSKQLKDLVFRAGNQHQRRKFIRNMKEIKQL 413

Query: 182 NSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRC 241
           N  C+ FF +I ++KWTQSHD G RYGWMT+N +EC+NGV KGARMLP+T+L +LTFYR 
Sbjct: 414 NPECLEFFEDIDLQKWTQSHDNGYRYGWMTSNAAECMNGVFKGARMLPMTSLVRLTFYRT 473

Query: 242 VKYFERRREETRGAL 256
           + YFERRR E   A+
Sbjct: 474 ILYFERRRAEISEAV 488

[Close]

BLAST of Lcy06g012600 vs. NCBI nr
Match: RVW83159.1 (hypothetical protein CK203_044939 [Vitis vinifera])

HSP 1 Score: 337.8 bits (865), Expect = 8.1e-89
Identity = 158/254 (62.20%), Postives = 190/254 (74.80%), Query Frame = 0


Query: 5   TNPGTRVEWK-IKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGKLL 64
           TNPGT+V WK I      G+     VFWAFG  +E FK+C PIIQIDGT LYGKY GKLL
Sbjct: 413 TNPGTKVVWKTIPLGGISGNVRFMRVFWAFGASVEGFKHCRPIIQIDGTFLYGKYMGKLL 472

Query: 65  IATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHDE-VCLISDRHGGIISAVNN 124
           IATS+D N H+ PLAFAIV+EE +D+W WFL  LR  VT  E +CLISDRH GI +AV N
Sbjct: 473 IATSIDGNGHVFPLAFAIVEEESQDSWSWFLIALRHHVTQREGICLISDRHAGINAAVRN 532

Query: 125 PNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAINS 184
           P+ GW+ P + HR+CL H+VSNFN K+K+K LK   YRAGCQHQ RKY + +EE+K ++ 
Sbjct: 533 PSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAGCQHQPRKYERYMEELKRLDE 592

Query: 185 TCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRCVK 244
             + +FS +  +KWTQ++D G RYGWMTTN++ECINGVLKGARMLPITAL QLTFYRCV 
Sbjct: 593 KSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLKGARMLPITALVQLTFYRCVS 652

Query: 245 YFERRREETRGALA 257
           YFE RR E R  +A
Sbjct: 653 YFETRRAEIRARMA 666

[Close]

BLAST of Lcy06g012600 vs. NCBI nr
Match: CAN72427.1 (hypothetical protein VITISV_008825 [Vitis vinifera])

HSP 1 Score: 337.8 bits (865), Expect = 8.1e-89
Identity = 158/254 (62.20%), Postives = 190/254 (74.80%), Query Frame = 0


Query: 5   TNPGTRVEWK-IKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGKLL 64
           TNPGT+V WK I      G+     VFWAFG  +E FK+C PIIQIDGT LYGKY GKLL
Sbjct: 259 TNPGTKVVWKTIPLGGISGNVRFMRVFWAFGASVEGFKHCRPIIQIDGTFLYGKYMGKLL 318

Query: 65  IATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHDE-VCLISDRHGGIISAVNN 124
           IATS+D N H+ PLAFAIV+EE +D+W WFL  LR  VT  E +CLISDRH GI +AV N
Sbjct: 319 IATSIDGNGHVFPLAFAIVEEESQDSWSWFLIALRHHVTQREGICLISDRHAGINAAVRN 378

Query: 125 PNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAINS 184
           P+ GW+ P + HR+CL H+VSNFN K+K+K LK   YRAGCQHQ RKY + +EE+K ++ 
Sbjct: 379 PSVGWSPPHAQHRYCLRHVVSNFNDKFKNKVLKELAYRAGCQHQPRKYERYMEELKRLDE 438

Query: 185 TCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTFYRCVK 244
             + +FS +  +KWTQ++D G RYGWMTTN++ECINGVLKGARMLPITAL QLTFYRCV 
Sbjct: 439 KSVAWFSKLDTQKWTQAYDLGYRYGWMTTNIAECINGVLKGARMLPITALVQLTFYRCVS 498

Query: 245 YFERRREETRGALA 257
           YFE RR E R  +A
Sbjct: 499 YFETRRAEIRARMA 512

[Close]

BLAST of Lcy06g012600 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 157.9 bits (398), Expect = 1.1e-38
Identity = 74/205 (36.10%), Postives = 114/205 (55.61%), Query Frame = 0


Query: 4   HTNPGTRVEWKIKTTQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRGKLL 63
           H++ G  V+W+     +   A    VFW+F   IE F++C P+I +D   L GKY+ KL+
Sbjct: 336 HSSNGLLVDWQYDLFPNPDFASFRGVFWSFSQSIEGFQHCRPLIVVDTKSLNGKYQLKLM 395

Query: 64  IATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVT-HDEVCLISDRHGGIISAVNN 123
           IA+ VD+     PLAFA+  E   D+W WF   +R+ VT   ++CLIS     I++ VN 
Sbjct: 396 IASGVDAANKFFPLAFAVTKEVSTDSWRWFFTKIREKVTQRKDLCLISSPLRDIVAVVNE 455

Query: 124 PNNGWTWPKSHHRFCLGHIVSNFNKKYKSKQLKNFVYRAGCQHQVRKYNKVVEEIKAINS 183
           P + W  P +HH+FCL H+ S F   ++   L++ V +AG  +Q  +++  + +IK  N 
Sbjct: 456 PGSLWQEPWAHHKFCLNHLRSQFLGVFRDYNLESLVEQAGSTNQKEEFDSYMNDIKEKNP 515

Query: 184 TCMNFFSNIGIEKWTQSHDEGVRYG 208
               +   I   KW  +HD G+RYG
Sbjct: 516 EAWKWLDQIPRHKWALAHDSGLRYG 540

[Close]

BLAST of Lcy06g012600 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 83/258 (32.17%), Postives = 132/258 (51.16%), Query Frame = 0


Query: 2   VKHTNPGTRVEWKIKT-TQSEGHAILTSVFWAFGPCIEAFKYCWPIIQIDGTHLYGKYRG 61
           V H++ G  V+W+  + T    HA    +FWAF   I+ F++C P+I +D  +L GKY+ 
Sbjct: 336 VLHSSNGLLVDWQYDSLTHDPEHASFRGLFWAFSQSIQGFQHCRPLIVVDTKNLGGKYKM 395

Query: 62  KLLIATSVDSNRHLLPLAFAIVDEECRDTWGWFLKHLRQIVTHDE-VCLISDRHGGIISA 121
           KL+IA++ D+     PLAFA+  E   D+W WFL  +R+ VT  + +CLIS     I++ 
Sbjct: 396 KLMIASAFDATNQYFPLAFAVTKEVSVDSWRWFLTRIREKVTQRQGICLISSPDPDILAV 455

Query: 122 VNNPNNGWTWPKSHHRFCLGHIVSNFNKKYK--SKQLKNFVYRAGCQHQVRKYNKVVEEI 181
           +N P + W  P ++HRFCL H+ S            +   V  AG   Q  +++  ++EI
Sbjct: 456 INEPGSQWKEPWAYHRFCLYHLCSKLCSVSPGFDYNMHFLVDEAGSSSQKEEFDSYMKEI 515

Query: 182 KAINSTCMNFFSNIGIEKWTQSHDEGVRYGWMTTNLSECINGVLKGARMLPITALAQLTF 241
           K  N     +       +W  +HD+G RYG M  + +E +  V K  R + +     L F
Sbjct: 516 KERNPEAWKWLDQFPPHQWALAHDDGRRYGIMRID-TEALFAVCKRFRKVAMAGGVMLLF 575

Query: 242 YRCVKYFERRREETRGAL 256
            +    F    + +RG+L
Sbjct: 576 GQLKDAFAESFKLSRGSL 592

The following BLAST results are available for this feature:

BLAST of Lcy06g012600 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy06g012600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRF1	9.1e-94	75.34	uncharacterized protein LOC111013502 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A5D3BS92	2.1e-90	60.78	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7TN56	2.1e-90	60.78	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A5BJW1	3.9e-89	62.20	SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_008825 ...	[more]
A0A438HFK5	3.9e-89	62.20	SWIM-type domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_044939 P...	[more]

BLAST of Lcy06g012600 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143642.1	1.9e-93	75.34	uncharacterized protein LOC111013502 [Momordica charantia]	[more]
KAA0044308.1	4.3e-90	60.78	uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa]	[more]
TYK02543.1	4.3e-90	60.78	uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa]	[more]
RVW83159.1	8.1e-89	62.20	hypothetical protein CK203_044939 [Vitis vinifera]	[more]
CAN72427.1	8.1e-89	62.20	hypothetical protein VITISV_008825 [Vitis vinifera]	[more]

BLAST of Lcy06g012600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64260.1	1.1e-38	36.10	MuDR family transposase	[more]
AT1G49920.1	1.3e-36	32.17	MuDR family transposase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018289	MULE transposase domain	PFAM	PF10551	MULE	coord: 46..144 e-value: 1.3E-17 score: 64.0
None	No IPR available	PANTHER	PTHR31973:SF135	SUBFAMILY NOT NAMED	coord: 4..234
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 4..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g012600.1	Lcy06g012600.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048507	meristem development
molecular_function	GO:0008270	zinc ion binding