Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTACCCGGAAGGTTGGATAAACAAAATTATGAAAAACATCTCCTCAGTTAGTTACCCTATCCTTGTTAACGAATCTCAAGTCCGAGTTCAAGCCTAGCAAGGGTCTTAGGCAAGGGGACCTTCTTTCTCCTTACTTGTTTCTCCTATGTGTCGAAGGTTTTTCATTGCTATTAAAAATTGGGAAGAGCTCTCTAACAACCTCAATGGTTTTCGCATTAATAGATTTTGTCCCCCTCTCGCTCATCTCTTTTTTGCAGACGACAACCTTATCTTTATCAAAGCTAATCCAAAGGATAATGTCTCCCTAAAGAACGTGTTGAGTTGGTACGAGGAAGCTTCGAGTCAAACAATTAACACTTACAAATCAGTATTCATGGCAAGCAAAAATGTGGGAAGTGATATATTCTGGAGTTTTGTGTGACTACTCTAGGGATAAAGAGGACGGATTCTCTTGGCCAATATTTGGGGATGTCGTCTCAAACAAGCCGCAATAAACGAAATGTTTTCAACATAATCAAGGAGAAAGTTAGAAAGGTGCTTCAGGGGTGGAAAGAGAAGTGTTTCTCTCAGGGGGGGAAGAAGTGTTGATTAAAGCAGTTGCCCAAGCAATTCCAGTATACAACATGAGTTGTTTCAGAATTCCCTCCACCATATGTAAAGAGATTGACATGATGTGTGCTAAGTTTTAATGGGGATCAGTGGGTGAAAAGAACAAATACCATTGGATTAGTTGGGAGAGATTGTGTTATAGTAAAGATAAGGGAGGCTTGGGATTCAGGAATCTGTCGGCTTTTAACCAGGTAGTGTTTGCTAAACAGAGTTGGAGAATAATAAAAAAAAAACCCGATAGCCTCCTTTTTAAGGTGCTCCGAGGAAAATACTTCAAGGATGAGTGCTTCCTCAAGGTTCCTTTGGGGTCAAACCCATCTTTGACTTGGCGGAGTATCTGTTGGGGTAGAGACTCATTCTCCAAGGGCTATAGATGGAAAGTAGGAAATGAGAACTATATTAAGGTGGATAAGGATCGTTGGATTAACAGGCAGGTAAACTGTACTTCTATATATTGTTCGCCAAACCTACAGGGTTTTACAGTTAATAGCCTTTTAGATGAAAACTTTGCCTGGAAAGAGGAATCTATTCGCCAAAATTTCTCTCCTTTAGATGCTGAAGATATCCTTAACACCGCTCTGGGAAACCGTCTTTCAAAGGATGAGATAATATGGAGCATGGACAAAAAAGGGATTTTTTCCGTCAAGAGTGCCTACCACTTAGCTATGAGCATAAATAATAGTTCTCTGGCATCTCCTTCGAGTATTAGCAATGGTAGGAAGATGTGGAAATGTTTATGGAAGACAAAGGTGGTCCCCAGGGGAAAATTGTGTGTGTGGAATGTTTTGAACAATTCCATTCCCACTAATTCAAACATCATCAAAAAAGGGATTGACATATCTCTACTATGTACCTTCTGCAAAAAAGGGAAGAATCTGTCTCTCATATTATTTGGGAATGTTAAGTTTCTAGGAACATTTGGGAAGATTTGATTCCCACCTGACAATATCTTTTCTCTATGTACAGGCACATTTAGGGCCCTAGGACTATTGGCAATGGCTCATGGAGAATGCAAAGGAAGACGACATGGACATAGCAGTTTTAATAATATGGAGCTTATGAAACGCAAGAAATTTCTCAGCCACAAACAAGACCAGAGCAGACCCAAAGCAAATCAGAATTCAAATCAACACTAG
mRNA sequence
ATGGGGTACCCGGAAGACGACAACCTTATCTTTATCAAAGCTAATCCAAAGGATAATGTCTCCCTAAAGAACGTGTTGAGTTGGTACGAGGAAGCTTCGAGTCAAACAATTAACACTTACAAATCAGTATTCATGGCAAGCAAAAATGTGGGAATGGGTGAAAAGAACAAATACCATTGGATTAGTTGGGAGAGATTGTGTTATAGTAAAGATAAGGGAGGCTTGGGATTCAGGAATCTGTCGGCTTTTAACCAGGTAGTGTTTGCTAAACAGAGTTGGAGAATAATAAAAAAAAAACCCGATAGCCTCCTTTTTAAGGTGCTCCGAGGAAAATACTTCAAGGATGAGTGCTTCCTCAAGGTTCCTTTGGGGTCAAACCCATCTTTGACTTGGCGGAGTATCTGTTGGGGTAGAGACTCATTCTCCAAGGGCTATAGATGGAAAGTAGGAAATGAGAACTATATTAAGGTGGATAAGGATCGTTGGATTAACAGGCAGGTAAACTGTACTTCTATATATTGTTCGCCAAACCTACAGGGTTTTACAGTTAATAGCCTTTTAGATGAAAACTTTGCCTGGAAAGAGGAATCTATTCGCCAAAATTTCTCTCCTTTAGATGCTGAAGATATCCTTAACACCGCTCTGGGAAACCGTCTTTCAAAGGATGAGATAATATGGAGCATGGACAAAAAAGGGATTTTTTCCGTCAAGAGTGCCTACCACTTAGCTATGAGCATAAATAATAGTTCTCTGGCATCTCCTTCGAGTATTAGCAATGGCACATTTAGGGCCCTAGGACTATTGGCAATGGCTCATGGAGAATGCAAAGGAAGACGACATGGACATAGCAGTTTTAATAATATGGAGCTTATGAAACGCAAGAAATTTCTCAGCCACAAACAAGACCAGAGCAGACCCAAAGCAAATCAGAATTCAAATCAACACTAG
Coding sequence (CDS)
ATGGGGTACCCGGAAGACGACAACCTTATCTTTATCAAAGCTAATCCAAAGGATAATGTCTCCCTAAAGAACGTGTTGAGTTGGTACGAGGAAGCTTCGAGTCAAACAATTAACACTTACAAATCAGTATTCATGGCAAGCAAAAATGTGGGAATGGGTGAAAAGAACAAATACCATTGGATTAGTTGGGAGAGATTGTGTTATAGTAAAGATAAGGGAGGCTTGGGATTCAGGAATCTGTCGGCTTTTAACCAGGTAGTGTTTGCTAAACAGAGTTGGAGAATAATAAAAAAAAAACCCGATAGCCTCCTTTTTAAGGTGCTCCGAGGAAAATACTTCAAGGATGAGTGCTTCCTCAAGGTTCCTTTGGGGTCAAACCCATCTTTGACTTGGCGGAGTATCTGTTGGGGTAGAGACTCATTCTCCAAGGGCTATAGATGGAAAGTAGGAAATGAGAACTATATTAAGGTGGATAAGGATCGTTGGATTAACAGGCAGGTAAACTGTACTTCTATATATTGTTCGCCAAACCTACAGGGTTTTACAGTTAATAGCCTTTTAGATGAAAACTTTGCCTGGAAAGAGGAATCTATTCGCCAAAATTTCTCTCCTTTAGATGCTGAAGATATCCTTAACACCGCTCTGGGAAACCGTCTTTCAAAGGATGAGATAATATGGAGCATGGACAAAAAAGGGATTTTTTCCGTCAAGAGTGCCTACCACTTAGCTATGAGCATAAATAATAGTTCTCTGGCATCTCCTTCGAGTATTAGCAATGGCACATTTAGGGCCCTAGGACTATTGGCAATGGCTCATGGAGAATGCAAAGGAAGACGACATGGACATAGCAGTTTTAATAATATGGAGCTTATGAAACGCAAGAAATTTCTCAGCCACAAACAAGACCAGAGCAGACCCAAAGCAAATCAGAATTCAAATCAACACTAG
Protein sequence
MGYPEDDNLIFIKANPKDNVSLKNVLSWYEEASSQTINTYKSVFMASKNVGMGEKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYFKDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIYCSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGIFSVKSAYHLAMSINNSSLASPSSISNGTFRALGLLAMAHGECKGRRHGHSSFNNMELMKRKKFLSHKQDQSRPKANQNSNQH
Homology
BLAST of Lcy06g010140 vs. ExPASy Swiss-Prot
Match:
P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)
HSP 1 Score: 104.8 bits (260), Expect = 1.9e-21
Identity = 51/110 (46.36%), Postives = 72/110 (65.45%), Query Frame = 0
Query: 55 KNKYHWISWERLCYSK-DKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 114
K K W++W++LC SK D GGLGFR+L FNQ + AKQS+RII +P +LL ++LR +YF
Sbjct: 36 KRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRII-HQPHTLLSRLLRSRYF 95
Query: 115 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWI 164
++ +G+ PS WRSI GR+ S+G +G+ + KV DRWI
Sbjct: 96 PHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144
BLAST of Lcy06g010140 vs. ExPASy TrEMBL
Match:
A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1)
HSP 1 Score: 206.5 bits (524), Expect = 1.7e-49
Identity = 104/227 (45.81%), Postives = 138/227 (60.79%), Query Frame = 0
Query: 54 EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
E K HW SW+ LC KD GG+GFR++S FNQ + AKQSWRI+ + PDSLL K LRGKYF
Sbjct: 497 EDRKIHWQSWKLLCIRKDLGGMGFRDISIFNQAMLAKQSWRIL-RHPDSLLAKTLRGKYF 556
Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
K FL+ LG+ PS WRSI WGRD F KGYRWKVGN I + D W+ R N + ++
Sbjct: 557 KTGSFLQAKLGARPSYAWRSILWGRDLFKKGYRWKVGNGFSINLSSDPWLPRDGNFSPVF 616
Query: 174 CSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGI 233
+++ F+V L++ W E +R++F +A+ IL T L ++ DEIIW MDK GI
Sbjct: 617 THIHVRNFSVAWLMEGRGRWDEIKVRESFIVSEADIILQTPLPSQDKDDEIIWGMDKTGI 676
Query: 234 FSVKSAYHLAMSINNSSLASPSSISNGTFRALG--LLAMAHGECKGR 279
FSV+SAYHL + + L ++ R G +L C G+
Sbjct: 677 FSVRSAYHLGIQLMLKLLPQIQTLKLSVGRDFGKLMLPQKSESCAGK 722
BLAST of Lcy06g010140 vs. ExPASy TrEMBL
Match:
A0A1S8ACU2 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1)
HSP 1 Score: 188.7 bits (478), Expect = 3.6e-44
Identity = 96/217 (44.24%), Postives = 130/217 (59.91%), Query Frame = 0
Query: 54 EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
++ HW SWE+LC +K +GGLGFR++++FNQ + AKQSWRII K P+SL+ K+L+ KYF
Sbjct: 77 DRKSTHWASWEKLCQAKGRGGLGFRDITSFNQALVAKQSWRII-KYPESLMAKILQAKYF 136
Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
K FL+ LGS PS WRSI WGR G RW++G + +K+ K WI R I
Sbjct: 137 KGADFLQAKLGSKPSFVWRSIIWGRQVIVNGMRWRIGTGDRVKIYKSHWIPRPQAFKPIS 196
Query: 174 CSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGI 233
TV L+DEN WKE I+Q+F+ DAE I L D+I+W DKKG
Sbjct: 197 APTLGMDCTVAELIDENQKWKESLIQQHFNFEDAELISRIQLPISPKPDQILWHYDKKGN 256
Query: 234 FSVKSAYHLAMSINNSSLASPSSISNGTFRALGLLAM 271
+SVKS Y +AM I + + S SS + G + + L +
Sbjct: 257 YSVKSGYQIAMRIKHPARPSSSSSNLGQWNVIWSLEL 292
BLAST of Lcy06g010140 vs. ExPASy TrEMBL
Match:
A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)
HSP 1 Score: 174.9 bits (442), Expect = 5.4e-40
Identity = 86/212 (40.57%), Postives = 132/212 (62.26%), Query Frame = 0
Query: 54 EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
E K HW++W L K +GG+GFR+L FN+ + AKQ WRI+ P+S+L +VL+G+YF
Sbjct: 625 EDKKIHWVAWNSLYLPKCEGGMGFRDLELFNKALLAKQCWRIL-NHPNSMLSRVLKGRYF 684
Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
KD F++ + NPS WRSI WGRD KG RW++GN + + + D W+ Q I
Sbjct: 685 KDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPT-LKIL 744
Query: 174 CSPNLQGFT-VNSLLD-ENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKK 233
SP L + V+SL+D E W+ + +R F+P +A+ IL+ +G +D +IW+ +K
Sbjct: 745 SSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKT 804
Query: 234 GIFSVKSAYHLAMSINNSSLASPSSISNGTFR 264
G++SV+S Y +A+ +NN + +PSS S+ R
Sbjct: 805 GVYSVRSGYKVAL-LNNPCVQAPSSSSSEEVR 833
BLAST of Lcy06g010140 vs. ExPASy TrEMBL
Match:
A0A803PPP4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 171.4 bits (433), Expect = 6.0e-39
Identity = 100/273 (36.63%), Postives = 138/273 (50.55%), Query Frame = 0
Query: 6 DDNLIFIKANPKDNVSLKNVLSWYEEASSQTINTYKSV---------------------F 65
DD+L+F AN +++K VL Y AS Q +N KS
Sbjct: 226 DDSLLFCHANESSCLAIKKVLDIYHRASGQLLNHDKSAIPTYIMSCFRLPAYVGNQLESM 285
Query: 66 MASKNVGMGEK-NKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSL 125
MA+ G E +K HW +W LC SK GG+GFR+ FNQ + AKQ+WR+++K DSL
Sbjct: 286 MANFWWGSNENGSKIHWRAWHLLCKSKIDGGMGFRSFEQFNQALLAKQAWRLLEKL-DSL 345
Query: 126 LFKVLRGKYFKDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWI 185
K+L+ +YF FL P G +PSLTW+ I WGR+ KG WK+G I+V D WI
Sbjct: 346 RGKLLKSRYFPHNDFLHAPHGHSPSLTWQGIVWGRELLLKGLHWKIGEGRLIRVALDPWI 405
Query: 186 NRQVNCTSIYCSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDE 245
+ T S + + + DE W + Q FSPLD + IL L D
Sbjct: 406 PSRDTFTPTLFSSHANAMVSHLITDER-VWNVPLLEQWFSPLDVDRILTMTLSFLQHSDA 465
Query: 246 IIWSMDKKGIFSVKSAYHLAMSINNSSLASPSS 257
++W G ++V+S YHLA SI ++S + SS
Sbjct: 466 LVWHYTTSGAYTVQSGYHLATSIADTSANNCSS 496
BLAST of Lcy06g010140 vs. ExPASy TrEMBL
Match:
A0A803PEK8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 169.9 bits (429), Expect = 1.7e-38
Identity = 97/269 (36.06%), Postives = 138/269 (51.30%), Query Frame = 0
Query: 6 DDNLIFIKANPKDNVSLKNVLSWYEEASSQTINTYKSVFMASKNVGMGEKN--------- 65
+D+LIF+ A+ K +L Y +AS Q +N +KS +NV G N
Sbjct: 1020 NDSLIFMDADMGSCQRFKGLLDLYSDASGQLVNFHKSEVCFGRNVDRGFSNSLLLFWGSE 1079
Query: 66 -------KYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLR 125
K HW W LC K+KGGLGFR+L FNQ + AKQ WR I + PD+L +VL+
Sbjct: 1080 RLNTMEKKIHWCKWAHLCKPKEKGGLGFRDLGLFNQALLAKQVWRCI-RFPDNLCSQVLK 1139
Query: 126 GKYFKDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNC 185
YF L+ G++ S WRS+ WG+ + GYRW+VGN ++V +D W++R V
Sbjct: 1140 ASYFPTRSILEAKSGAHASFVWRSLMWGKKVIANGYRWRVGNGETVRVLEDPWLSRPVT- 1199
Query: 186 TSIYCSPNL-QGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSM 245
IY P L + V L + W E +R F+ DAE IL+T +D+I+W
Sbjct: 1200 FKIYDKPPLPENLYVADLKHGDGRWDENFVRSVFNMEDAELILSTPSTGWDLEDKIMWHY 1259
Query: 246 DKKGIFSVKSAYHLAMSINNSSLASPSSI 258
K G ++VKS Y +A S+ S +
Sbjct: 1260 SKNGEYTVKSGYKMASSLATEQYQSDDQL 1286
BLAST of Lcy06g010140 vs. NCBI nr
Match:
XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia])
HSP 1 Score: 206.5 bits (524), Expect = 3.5e-49
Identity = 104/227 (45.81%), Postives = 138/227 (60.79%), Query Frame = 0
Query: 54 EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
E K HW SW+ LC KD GG+GFR++S FNQ + AKQSWRI+ + PDSLL K LRGKYF
Sbjct: 497 EDRKIHWQSWKLLCIRKDLGGMGFRDISIFNQAMLAKQSWRIL-RHPDSLLAKTLRGKYF 556
Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
K FL+ LG+ PS WRSI WGRD F KGYRWKVGN I + D W+ R N + ++
Sbjct: 557 KTGSFLQAKLGARPSYAWRSILWGRDLFKKGYRWKVGNGFSINLSSDPWLPRDGNFSPVF 616
Query: 174 CSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGI 233
+++ F+V L++ W E +R++F +A+ IL T L ++ DEIIW MDK GI
Sbjct: 617 THIHVRNFSVAWLMEGRGRWDEIKVRESFIVSEADIILQTPLPSQDKDDEIIWGMDKTGI 676
Query: 234 FSVKSAYHLAMSINNSSLASPSSISNGTFRALG--LLAMAHGECKGR 279
FSV+SAYHL + + L ++ R G +L C G+
Sbjct: 677 FSVRSAYHLGIQLMLKLLPQIQTLKLSVGRDFGKLMLPQKSESCAGK 722
BLAST of Lcy06g010140 vs. NCBI nr
Match:
XP_015388020.1 (uncharacterized protein LOC107177951 [Citrus sinensis])
HSP 1 Score: 201.4 bits (511), Expect = 1.1e-47
Identity = 105/275 (38.18%), Postives = 155/275 (56.36%), Query Frame = 0
Query: 6 DDNLIFIKANPKDNVSLKNVLSWYEEASSQTINTYKSVFMASKNVGMG------------ 65
DD+L+F +A +D +LK + Y AS + N KS S N G
Sbjct: 548 DDSLVFTRATKEDCTNLKQLFDCYAAASGKIFNFEKSFMFFSDNAKQGQIATIKDIFQLQ 607
Query: 66 EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 125
EK HW WER+C +K +G LGFR+LS+FNQ + AKQSWRII + P+SLL +V++ KYF
Sbjct: 608 EKRSIHWSKWERMCQAKKRGDLGFRDLSSFNQALVAKQSWRII-QAPESLLARVMKEKYF 667
Query: 126 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 185
+ F++ +GSNPS WRSI WGR+ KG RW++ + +KV + W+ R I
Sbjct: 668 RHSGFMEAQVGSNPSYIWRSILWGREVIHKGLRWRIRDGKLVKVYQSGWLPRPETFKPIS 727
Query: 186 CSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGI 245
TV+ L+DE+ W++++IR++F DA IL L + S D+++W DKKG
Sbjct: 728 PPSLPLDTTVSVLIDEDHCWRDDAIRKHFHQEDAAQILKIPLPRQPSLDQVLWHYDKKGN 787
Query: 246 FSVKSAYHLAMSINNSSLASPSSISNGTFRALGLL 269
+SVKS Y LA+ + + S S ++ ++ L
Sbjct: 788 YSVKSGYQLALQMKFPNRPSSSKEGKSSWSSIWYL 821
BLAST of Lcy06g010140 vs. NCBI nr
Match:
XP_024038343.1 (uncharacterized protein LOC112097373 [Citrus clementina])
HSP 1 Score: 179.9 bits (455), Expect = 3.5e-41
Identity = 87/218 (39.91%), Postives = 134/218 (61.47%), Query Frame = 0
Query: 54 EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
+K HW W +L +K +GG+GFR+ ++FNQ + AKQ WRI+ + PDSL+ K+L+ +YF
Sbjct: 759 DKKAIHWSRWNKLSQAKCRGGMGFRDFTSFNQALVAKQGWRIL-QFPDSLVAKILQARYF 818
Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
+ + F+ LGSNPS WRSI WGR SKG +W++GN I + K+ W+ R + I
Sbjct: 819 QHKDFMNARLGSNPSFIWRSILWGRQVISKGSKWRIGNGQSIMLHKENWLPRPLTFKPI- 878
Query: 174 CSPNLQG-FTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKG 233
P+L V L++E+ W E I ++F+ +DAE I+ L R KDE+IW DKKG
Sbjct: 879 SKPSLPADALVAELINEDHTWNEGLIHRHFTKIDAEAIVRILLPRRPMKDEVIWHYDKKG 938
Query: 234 IFSVKSAYHLAMSINNSSLASPSSISNGTFRALGLLAM 271
+SVKS Y +A+++ + + S+ + + A+ LL +
Sbjct: 939 QYSVKSGYQIALNLKFPAKPTSSATTENQWNAIWLLTL 974
BLAST of Lcy06g010140 vs. NCBI nr
Match:
XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])
HSP 1 Score: 177.9 bits (450), Expect = 1.3e-40
Identity = 100/252 (39.68%), Postives = 137/252 (54.37%), Query Frame = 0
Query: 54 EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
++ HW WER+ +SK +GG+GFR+LS+FNQ + AKQ WRI+ + P SL+ +VL+ +YF
Sbjct: 631 DRKGIHWARWERISHSKARGGMGFRDLSSFNQALVAKQGWRIM-QFPSSLVARVLKARYF 690
Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
K F+ LGS PS WRSI WGR KG RW++GN + V + WI R I
Sbjct: 691 KHTGFMNAGLGSKPSFVWRSIVWGRQVLHKGARWRIGNGQNVLVYGNNWIPRPTTFKPIS 750
Query: 174 CSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGI 233
TV L+DE W+E+ I Q+F P DAE I+ L R +D++IW DKKG
Sbjct: 751 APSMGTDTTVAELIDEKQQWREDLILQHFRPEDAEAIMQIPLPKRPKEDQLIWHYDKKGY 810
Query: 234 FSVKSAYHLAMSINNSSLASPSSISNGTFRALGLLAMAHG-ECKGRRHGHSSFNNMELMK 293
+SVKS Y +AM I S S+ +R + LA+ + R H E +
Sbjct: 811 YSVKSGYQVAMRIKFPEDPSCSNHDQNLWRFIWKLAIPEKVKIFLWRAAHDLLPTAENLW 870
Query: 294 RKKFLSHKQDQS 305
+KK L QS
Sbjct: 871 KKKVLQEPMCQS 881
BLAST of Lcy06g010140 vs. NCBI nr
Match:
XP_024035599.1 (uncharacterized protein LOC112096407 [Citrus clementina])
HSP 1 Score: 177.2 bits (448), Expect = 2.3e-40
Identity = 83/193 (43.01%), Postives = 118/193 (61.14%), Query Frame = 0
Query: 54 EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
+K HW WE+L Y+K +GGLGFR++S FNQ + AKQ WR++ + P+SL+ KV++ +Y+
Sbjct: 560 DKKGIHWGKWEKLSYAKIRGGLGFRDVSCFNQALLAKQGWRLL-QNPESLVAKVIKARYY 619
Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
K+ FL +GS+PS WRSI WGR KG RW++GN I++ WI R I
Sbjct: 620 KNTDFLNAKVGSSPSFIWRSILWGRQVLQKGTRWRIGNGEKIQIQASNWIPRPTTFKLIV 679
Query: 174 CSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGI 233
G V+ L+ N W E I Q+F+ +DA+ I + L +DEIIW D+KG+
Sbjct: 680 EPSLPTGAKVSELILPNQQWNESMINQSFARMDADIIKSILLPRTPQEDEIIWHYDRKGL 739
Query: 234 FSVKSAYHLAMSI 247
+SVKS Y LA+ I
Sbjct: 740 YSVKSGYQLALKI 751
BLAST of Lcy06g010140 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 108.2 bits (269), Expect = 1.2e-23
Identity = 63/214 (29.44%), Postives = 106/214 (49.53%), Query Frame = 0
Query: 54 EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
E HW +W+ L K +GG+GF+++ AFN + KQ WR++ +P+SL+ KV + +YF
Sbjct: 35 EAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRML-SRPESLMAKVFKSRYF 94
Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
L PLGS PS W+SI ++ +G R VGN I + + +W++ + ++
Sbjct: 95 HKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALR 154
Query: 174 CS--PNLQGFTVNSLL-------DENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEI 233
P + +V+S+L + W+++ I F ++ + I G R D
Sbjct: 155 MQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSY 214
Query: 234 IWSMDKKGIFSVKSAYHLAMSINNSSLASPSSIS 259
W G ++VKS Y + I N +SP +S
Sbjct: 215 TWDYTSSGDYTVKSGYWVLTQIINKR-SSPQEVS 246
BLAST of Lcy06g010140 vs. TAIR 10
Match:
ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 104.8 bits (260), Expect = 1.3e-22
Identity = 51/110 (46.36%), Postives = 72/110 (65.45%), Query Frame = 0
Query: 55 KNKYHWISWERLCYSK-DKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 114
K K W++W++LC SK D GGLGFR+L FNQ + AKQS+RII +P +LL ++LR +YF
Sbjct: 36 KRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRII-HQPHTLLSRLLRSRYF 95
Query: 115 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWI 164
++ +G+ PS WRSI GR+ S+G +G+ + KV DRWI
Sbjct: 96 PHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P93295 | 1.9e-21 | 46.36 | Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1DRA0 | 1.7e-49 | 45.81 | uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022... | [more] |
A0A1S8ACU2 | 3.6e-44 | 44.24 | Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1 | [more] |
A0A6J1DAR4 | 5.4e-40 | 40.57 | uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A803PPP4 | 6.0e-39 | 36.63 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A803PEK8 | 1.7e-38 | 36.06 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT4G29090.1 | 1.2e-23 | 29.44 | Ribonuclease H-like superfamily protein | [more] |
ATMG00310.1 | 1.3e-22 | 46.36 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |