Lcy06g010140 (gene) Sponge gourd (P93075) v1

Overview
NameLcy06g010140
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionRibonuclease H-like superfamily protein
LocationChr06: 10851399 .. 10853148 (+)
RNA-Seq ExpressionLcy06g010140
SyntenyLcy06g010140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTACCCGGAAGGTTGGATAAACAAAATTATGAAAAACATCTCCTCAGTTAGTTACCCTATCCTTGTTAACGAATCTCAAGTCCGAGTTCAAGCCTAGCAAGGGTCTTAGGCAAGGGGACCTTCTTTCTCCTTACTTGTTTCTCCTATGTGTCGAAGGTTTTTCATTGCTATTAAAAATTGGGAAGAGCTCTCTAACAACCTCAATGGTTTTCGCATTAATAGATTTTGTCCCCCTCTCGCTCATCTCTTTTTTGCAGACGACAACCTTATCTTTATCAAAGCTAATCCAAAGGATAATGTCTCCCTAAAGAACGTGTTGAGTTGGTACGAGGAAGCTTCGAGTCAAACAATTAACACTTACAAATCAGTATTCATGGCAAGCAAAAATGTGGGAAGTGATATATTCTGGAGTTTTGTGTGACTACTCTAGGGATAAAGAGGACGGATTCTCTTGGCCAATATTTGGGGATGTCGTCTCAAACAAGCCGCAATAAACGAAATGTTTTCAACATAATCAAGGAGAAAGTTAGAAAGGTGCTTCAGGGGTGGAAAGAGAAGTGTTTCTCTCAGGGGGGGAAGAAGTGTTGATTAAAGCAGTTGCCCAAGCAATTCCAGTATACAACATGAGTTGTTTCAGAATTCCCTCCACCATATGTAAAGAGATTGACATGATGTGTGCTAAGTTTTAATGGGGATCAGTGGGTGAAAAGAACAAATACCATTGGATTAGTTGGGAGAGATTGTGTTATAGTAAAGATAAGGGAGGCTTGGGATTCAGGAATCTGTCGGCTTTTAACCAGGTAGTGTTTGCTAAACAGAGTTGGAGAATAATAAAAAAAAAACCCGATAGCCTCCTTTTTAAGGTGCTCCGAGGAAAATACTTCAAGGATGAGTGCTTCCTCAAGGTTCCTTTGGGGTCAAACCCATCTTTGACTTGGCGGAGTATCTGTTGGGGTAGAGACTCATTCTCCAAGGGCTATAGATGGAAAGTAGGAAATGAGAACTATATTAAGGTGGATAAGGATCGTTGGATTAACAGGCAGGTAAACTGTACTTCTATATATTGTTCGCCAAACCTACAGGGTTTTACAGTTAATAGCCTTTTAGATGAAAACTTTGCCTGGAAAGAGGAATCTATTCGCCAAAATTTCTCTCCTTTAGATGCTGAAGATATCCTTAACACCGCTCTGGGAAACCGTCTTTCAAAGGATGAGATAATATGGAGCATGGACAAAAAAGGGATTTTTTCCGTCAAGAGTGCCTACCACTTAGCTATGAGCATAAATAATAGTTCTCTGGCATCTCCTTCGAGTATTAGCAATGGTAGGAAGATGTGGAAATGTTTATGGAAGACAAAGGTGGTCCCCAGGGGAAAATTGTGTGTGTGGAATGTTTTGAACAATTCCATTCCCACTAATTCAAACATCATCAAAAAAGGGATTGACATATCTCTACTATGTACCTTCTGCAAAAAAGGGAAGAATCTGTCTCTCATATTATTTGGGAATGTTAAGTTTCTAGGAACATTTGGGAAGATTTGATTCCCACCTGACAATATCTTTTCTCTATGTACAGGCACATTTAGGGCCCTAGGACTATTGGCAATGGCTCATGGAGAATGCAAAGGAAGACGACATGGACATAGCAGTTTTAATAATATGGAGCTTATGAAACGCAAGAAATTTCTCAGCCACAAACAAGACCAGAGCAGACCCAAAGCAAATCAGAATTCAAATCAACACTAG

mRNA sequence

ATGGGGTACCCGGAAGACGACAACCTTATCTTTATCAAAGCTAATCCAAAGGATAATGTCTCCCTAAAGAACGTGTTGAGTTGGTACGAGGAAGCTTCGAGTCAAACAATTAACACTTACAAATCAGTATTCATGGCAAGCAAAAATGTGGGAATGGGTGAAAAGAACAAATACCATTGGATTAGTTGGGAGAGATTGTGTTATAGTAAAGATAAGGGAGGCTTGGGATTCAGGAATCTGTCGGCTTTTAACCAGGTAGTGTTTGCTAAACAGAGTTGGAGAATAATAAAAAAAAAACCCGATAGCCTCCTTTTTAAGGTGCTCCGAGGAAAATACTTCAAGGATGAGTGCTTCCTCAAGGTTCCTTTGGGGTCAAACCCATCTTTGACTTGGCGGAGTATCTGTTGGGGTAGAGACTCATTCTCCAAGGGCTATAGATGGAAAGTAGGAAATGAGAACTATATTAAGGTGGATAAGGATCGTTGGATTAACAGGCAGGTAAACTGTACTTCTATATATTGTTCGCCAAACCTACAGGGTTTTACAGTTAATAGCCTTTTAGATGAAAACTTTGCCTGGAAAGAGGAATCTATTCGCCAAAATTTCTCTCCTTTAGATGCTGAAGATATCCTTAACACCGCTCTGGGAAACCGTCTTTCAAAGGATGAGATAATATGGAGCATGGACAAAAAAGGGATTTTTTCCGTCAAGAGTGCCTACCACTTAGCTATGAGCATAAATAATAGTTCTCTGGCATCTCCTTCGAGTATTAGCAATGGCACATTTAGGGCCCTAGGACTATTGGCAATGGCTCATGGAGAATGCAAAGGAAGACGACATGGACATAGCAGTTTTAATAATATGGAGCTTATGAAACGCAAGAAATTTCTCAGCCACAAACAAGACCAGAGCAGACCCAAAGCAAATCAGAATTCAAATCAACACTAG

Coding sequence (CDS)

ATGGGGTACCCGGAAGACGACAACCTTATCTTTATCAAAGCTAATCCAAAGGATAATGTCTCCCTAAAGAACGTGTTGAGTTGGTACGAGGAAGCTTCGAGTCAAACAATTAACACTTACAAATCAGTATTCATGGCAAGCAAAAATGTGGGAATGGGTGAAAAGAACAAATACCATTGGATTAGTTGGGAGAGATTGTGTTATAGTAAAGATAAGGGAGGCTTGGGATTCAGGAATCTGTCGGCTTTTAACCAGGTAGTGTTTGCTAAACAGAGTTGGAGAATAATAAAAAAAAAACCCGATAGCCTCCTTTTTAAGGTGCTCCGAGGAAAATACTTCAAGGATGAGTGCTTCCTCAAGGTTCCTTTGGGGTCAAACCCATCTTTGACTTGGCGGAGTATCTGTTGGGGTAGAGACTCATTCTCCAAGGGCTATAGATGGAAAGTAGGAAATGAGAACTATATTAAGGTGGATAAGGATCGTTGGATTAACAGGCAGGTAAACTGTACTTCTATATATTGTTCGCCAAACCTACAGGGTTTTACAGTTAATAGCCTTTTAGATGAAAACTTTGCCTGGAAAGAGGAATCTATTCGCCAAAATTTCTCTCCTTTAGATGCTGAAGATATCCTTAACACCGCTCTGGGAAACCGTCTTTCAAAGGATGAGATAATATGGAGCATGGACAAAAAAGGGATTTTTTCCGTCAAGAGTGCCTACCACTTAGCTATGAGCATAAATAATAGTTCTCTGGCATCTCCTTCGAGTATTAGCAATGGCACATTTAGGGCCCTAGGACTATTGGCAATGGCTCATGGAGAATGCAAAGGAAGACGACATGGACATAGCAGTTTTAATAATATGGAGCTTATGAAACGCAAGAAATTTCTCAGCCACAAACAAGACCAGAGCAGACCCAAAGCAAATCAGAATTCAAATCAACACTAG

Protein sequence

MGYPEDDNLIFIKANPKDNVSLKNVLSWYEEASSQTINTYKSVFMASKNVGMGEKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYFKDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIYCSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGIFSVKSAYHLAMSINNSSLASPSSISNGTFRALGLLAMAHGECKGRRHGHSSFNNMELMKRKKFLSHKQDQSRPKANQNSNQH
Homology
BLAST of Lcy06g010140 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.9e-21
Identity = 51/110 (46.36%), Postives = 72/110 (65.45%), Query Frame = 0

Query: 55  KNKYHWISWERLCYSK-DKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 114
           K K  W++W++LC SK D GGLGFR+L  FNQ + AKQS+RII  +P +LL ++LR +YF
Sbjct: 36  KRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRII-HQPHTLLSRLLRSRYF 95

Query: 115 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWI 164
                ++  +G+ PS  WRSI  GR+  S+G    +G+  + KV  DRWI
Sbjct: 96  PHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144

BLAST of Lcy06g010140 vs. ExPASy TrEMBL
Match: A0A6J1DRA0 (uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022423 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 1.7e-49
Identity = 104/227 (45.81%), Postives = 138/227 (60.79%), Query Frame = 0

Query: 54  EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
           E  K HW SW+ LC  KD GG+GFR++S FNQ + AKQSWRI+ + PDSLL K LRGKYF
Sbjct: 497 EDRKIHWQSWKLLCIRKDLGGMGFRDISIFNQAMLAKQSWRIL-RHPDSLLAKTLRGKYF 556

Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
           K   FL+  LG+ PS  WRSI WGRD F KGYRWKVGN   I +  D W+ R  N + ++
Sbjct: 557 KTGSFLQAKLGARPSYAWRSILWGRDLFKKGYRWKVGNGFSINLSSDPWLPRDGNFSPVF 616

Query: 174 CSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGI 233
              +++ F+V  L++    W E  +R++F   +A+ IL T L ++   DEIIW MDK GI
Sbjct: 617 THIHVRNFSVAWLMEGRGRWDEIKVRESFIVSEADIILQTPLPSQDKDDEIIWGMDKTGI 676

Query: 234 FSVKSAYHLAMSINNSSLASPSSISNGTFRALG--LLAMAHGECKGR 279
           FSV+SAYHL + +    L    ++     R  G  +L      C G+
Sbjct: 677 FSVRSAYHLGIQLMLKLLPQIQTLKLSVGRDFGKLMLPQKSESCAGK 722

BLAST of Lcy06g010140 vs. ExPASy TrEMBL
Match: A0A1S8ACU2 (Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 3.6e-44
Identity = 96/217 (44.24%), Postives = 130/217 (59.91%), Query Frame = 0

Query: 54  EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
           ++   HW SWE+LC +K +GGLGFR++++FNQ + AKQSWRII K P+SL+ K+L+ KYF
Sbjct: 77  DRKSTHWASWEKLCQAKGRGGLGFRDITSFNQALVAKQSWRII-KYPESLMAKILQAKYF 136

Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
           K   FL+  LGS PS  WRSI WGR     G RW++G  + +K+ K  WI R      I 
Sbjct: 137 KGADFLQAKLGSKPSFVWRSIIWGRQVIVNGMRWRIGTGDRVKIYKSHWIPRPQAFKPIS 196

Query: 174 CSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGI 233
                   TV  L+DEN  WKE  I+Q+F+  DAE I    L      D+I+W  DKKG 
Sbjct: 197 APTLGMDCTVAELIDENQKWKESLIQQHFNFEDAELISRIQLPISPKPDQILWHYDKKGN 256

Query: 234 FSVKSAYHLAMSINNSSLASPSSISNGTFRALGLLAM 271
           +SVKS Y +AM I + +  S SS + G +  +  L +
Sbjct: 257 YSVKSGYQIAMRIKHPARPSSSSSNLGQWNVIWSLEL 292

BLAST of Lcy06g010140 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 5.4e-40
Identity = 86/212 (40.57%), Postives = 132/212 (62.26%), Query Frame = 0

Query: 54  EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
           E  K HW++W  L   K +GG+GFR+L  FN+ + AKQ WRI+   P+S+L +VL+G+YF
Sbjct: 625 EDKKIHWVAWNSLYLPKCEGGMGFRDLELFNKALLAKQCWRIL-NHPNSMLSRVLKGRYF 684

Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
           KD  F++  +  NPS  WRSI WGRD   KG RW++GN + + +  D W+  Q     I 
Sbjct: 685 KDCSFMEAKISGNPSYIWRSILWGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPT-LKIL 744

Query: 174 CSPNLQGFT-VNSLLD-ENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKK 233
            SP L   + V+SL+D E   W+ + +R  F+P +A+ IL+  +G    +D +IW+ +K 
Sbjct: 745 SSPRLPLVSRVSSLVDHEEGGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKT 804

Query: 234 GIFSVKSAYHLAMSINNSSLASPSSISNGTFR 264
           G++SV+S Y +A+ +NN  + +PSS S+   R
Sbjct: 805 GVYSVRSGYKVAL-LNNPCVQAPSSSSSEEVR 833

BLAST of Lcy06g010140 vs. ExPASy TrEMBL
Match: A0A803PPP4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 6.0e-39
Identity = 100/273 (36.63%), Postives = 138/273 (50.55%), Query Frame = 0

Query: 6   DDNLIFIKANPKDNVSLKNVLSWYEEASSQTINTYKSV---------------------F 65
           DD+L+F  AN    +++K VL  Y  AS Q +N  KS                       
Sbjct: 226 DDSLLFCHANESSCLAIKKVLDIYHRASGQLLNHDKSAIPTYIMSCFRLPAYVGNQLESM 285

Query: 66  MASKNVGMGEK-NKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSL 125
           MA+   G  E  +K HW +W  LC SK  GG+GFR+   FNQ + AKQ+WR+++K  DSL
Sbjct: 286 MANFWWGSNENGSKIHWRAWHLLCKSKIDGGMGFRSFEQFNQALLAKQAWRLLEKL-DSL 345

Query: 126 LFKVLRGKYFKDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWI 185
             K+L+ +YF    FL  P G +PSLTW+ I WGR+   KG  WK+G    I+V  D WI
Sbjct: 346 RGKLLKSRYFPHNDFLHAPHGHSPSLTWQGIVWGRELLLKGLHWKIGEGRLIRVALDPWI 405

Query: 186 NRQVNCTSIYCSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDE 245
             +   T    S +      + + DE   W    + Q FSPLD + IL   L      D 
Sbjct: 406 PSRDTFTPTLFSSHANAMVSHLITDER-VWNVPLLEQWFSPLDVDRILTMTLSFLQHSDA 465

Query: 246 IIWSMDKKGIFSVKSAYHLAMSINNSSLASPSS 257
           ++W     G ++V+S YHLA SI ++S  + SS
Sbjct: 466 LVWHYTTSGAYTVQSGYHLATSIADTSANNCSS 496

BLAST of Lcy06g010140 vs. ExPASy TrEMBL
Match: A0A803PEK8 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 1.7e-38
Identity = 97/269 (36.06%), Postives = 138/269 (51.30%), Query Frame = 0

Query: 6    DDNLIFIKANPKDNVSLKNVLSWYEEASSQTINTYKSVFMASKNVGMGEKN--------- 65
            +D+LIF+ A+       K +L  Y +AS Q +N +KS     +NV  G  N         
Sbjct: 1020 NDSLIFMDADMGSCQRFKGLLDLYSDASGQLVNFHKSEVCFGRNVDRGFSNSLLLFWGSE 1079

Query: 66   -------KYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLR 125
                   K HW  W  LC  K+KGGLGFR+L  FNQ + AKQ WR I + PD+L  +VL+
Sbjct: 1080 RLNTMEKKIHWCKWAHLCKPKEKGGLGFRDLGLFNQALLAKQVWRCI-RFPDNLCSQVLK 1139

Query: 126  GKYFKDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNC 185
              YF     L+   G++ S  WRS+ WG+   + GYRW+VGN   ++V +D W++R V  
Sbjct: 1140 ASYFPTRSILEAKSGAHASFVWRSLMWGKKVIANGYRWRVGNGETVRVLEDPWLSRPVT- 1199

Query: 186  TSIYCSPNL-QGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSM 245
              IY  P L +   V  L   +  W E  +R  F+  DAE IL+T       +D+I+W  
Sbjct: 1200 FKIYDKPPLPENLYVADLKHGDGRWDENFVRSVFNMEDAELILSTPSTGWDLEDKIMWHY 1259

Query: 246  DKKGIFSVKSAYHLAMSINNSSLASPSSI 258
             K G ++VKS Y +A S+      S   +
Sbjct: 1260 SKNGEYTVKSGYKMASSLATEQYQSDDQL 1286

BLAST of Lcy06g010140 vs. NCBI nr
Match: XP_022155286.1 (uncharacterized protein LOC111022423 [Momordica charantia])

HSP 1 Score: 206.5 bits (524), Expect = 3.5e-49
Identity = 104/227 (45.81%), Postives = 138/227 (60.79%), Query Frame = 0

Query: 54  EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
           E  K HW SW+ LC  KD GG+GFR++S FNQ + AKQSWRI+ + PDSLL K LRGKYF
Sbjct: 497 EDRKIHWQSWKLLCIRKDLGGMGFRDISIFNQAMLAKQSWRIL-RHPDSLLAKTLRGKYF 556

Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
           K   FL+  LG+ PS  WRSI WGRD F KGYRWKVGN   I +  D W+ R  N + ++
Sbjct: 557 KTGSFLQAKLGARPSYAWRSILWGRDLFKKGYRWKVGNGFSINLSSDPWLPRDGNFSPVF 616

Query: 174 CSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGI 233
              +++ F+V  L++    W E  +R++F   +A+ IL T L ++   DEIIW MDK GI
Sbjct: 617 THIHVRNFSVAWLMEGRGRWDEIKVRESFIVSEADIILQTPLPSQDKDDEIIWGMDKTGI 676

Query: 234 FSVKSAYHLAMSINNSSLASPSSISNGTFRALG--LLAMAHGECKGR 279
           FSV+SAYHL + +    L    ++     R  G  +L      C G+
Sbjct: 677 FSVRSAYHLGIQLMLKLLPQIQTLKLSVGRDFGKLMLPQKSESCAGK 722

BLAST of Lcy06g010140 vs. NCBI nr
Match: XP_015388020.1 (uncharacterized protein LOC107177951 [Citrus sinensis])

HSP 1 Score: 201.4 bits (511), Expect = 1.1e-47
Identity = 105/275 (38.18%), Postives = 155/275 (56.36%), Query Frame = 0

Query: 6   DDNLIFIKANPKDNVSLKNVLSWYEEASSQTINTYKSVFMASKNVGMG------------ 65
           DD+L+F +A  +D  +LK +   Y  AS +  N  KS    S N   G            
Sbjct: 548 DDSLVFTRATKEDCTNLKQLFDCYAAASGKIFNFEKSFMFFSDNAKQGQIATIKDIFQLQ 607

Query: 66  EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 125
           EK   HW  WER+C +K +G LGFR+LS+FNQ + AKQSWRII + P+SLL +V++ KYF
Sbjct: 608 EKRSIHWSKWERMCQAKKRGDLGFRDLSSFNQALVAKQSWRII-QAPESLLARVMKEKYF 667

Query: 126 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 185
           +   F++  +GSNPS  WRSI WGR+   KG RW++ +   +KV +  W+ R      I 
Sbjct: 668 RHSGFMEAQVGSNPSYIWRSILWGREVIHKGLRWRIRDGKLVKVYQSGWLPRPETFKPIS 727

Query: 186 CSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGI 245
                   TV+ L+DE+  W++++IR++F   DA  IL   L  + S D+++W  DKKG 
Sbjct: 728 PPSLPLDTTVSVLIDEDHCWRDDAIRKHFHQEDAAQILKIPLPRQPSLDQVLWHYDKKGN 787

Query: 246 FSVKSAYHLAMSINNSSLASPSSISNGTFRALGLL 269
           +SVKS Y LA+ +   +  S S     ++ ++  L
Sbjct: 788 YSVKSGYQLALQMKFPNRPSSSKEGKSSWSSIWYL 821

BLAST of Lcy06g010140 vs. NCBI nr
Match: XP_024038343.1 (uncharacterized protein LOC112097373 [Citrus clementina])

HSP 1 Score: 179.9 bits (455), Expect = 3.5e-41
Identity = 87/218 (39.91%), Postives = 134/218 (61.47%), Query Frame = 0

Query: 54  EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
           +K   HW  W +L  +K +GG+GFR+ ++FNQ + AKQ WRI+ + PDSL+ K+L+ +YF
Sbjct: 759 DKKAIHWSRWNKLSQAKCRGGMGFRDFTSFNQALVAKQGWRIL-QFPDSLVAKILQARYF 818

Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
           + + F+   LGSNPS  WRSI WGR   SKG +W++GN   I + K+ W+ R +    I 
Sbjct: 819 QHKDFMNARLGSNPSFIWRSILWGRQVISKGSKWRIGNGQSIMLHKENWLPRPLTFKPI- 878

Query: 174 CSPNLQG-FTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKG 233
             P+L     V  L++E+  W E  I ++F+ +DAE I+   L  R  KDE+IW  DKKG
Sbjct: 879 SKPSLPADALVAELINEDHTWNEGLIHRHFTKIDAEAIVRILLPRRPMKDEVIWHYDKKG 938

Query: 234 IFSVKSAYHLAMSINNSSLASPSSISNGTFRALGLLAM 271
            +SVKS Y +A+++   +  + S+ +   + A+ LL +
Sbjct: 939 QYSVKSGYQIALNLKFPAKPTSSATTENQWNAIWLLTL 974

BLAST of Lcy06g010140 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 177.9 bits (450), Expect = 1.3e-40
Identity = 100/252 (39.68%), Postives = 137/252 (54.37%), Query Frame = 0

Query: 54  EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
           ++   HW  WER+ +SK +GG+GFR+LS+FNQ + AKQ WRI+ + P SL+ +VL+ +YF
Sbjct: 631 DRKGIHWARWERISHSKARGGMGFRDLSSFNQALVAKQGWRIM-QFPSSLVARVLKARYF 690

Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
           K   F+   LGS PS  WRSI WGR    KG RW++GN   + V  + WI R      I 
Sbjct: 691 KHTGFMNAGLGSKPSFVWRSIVWGRQVLHKGARWRIGNGQNVLVYGNNWIPRPTTFKPIS 750

Query: 174 CSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGI 233
                   TV  L+DE   W+E+ I Q+F P DAE I+   L  R  +D++IW  DKKG 
Sbjct: 751 APSMGTDTTVAELIDEKQQWREDLILQHFRPEDAEAIMQIPLPKRPKEDQLIWHYDKKGY 810

Query: 234 FSVKSAYHLAMSINNSSLASPSSISNGTFRALGLLAMAHG-ECKGRRHGHSSFNNMELMK 293
           +SVKS Y +AM I      S S+     +R +  LA+    +    R  H      E + 
Sbjct: 811 YSVKSGYQVAMRIKFPEDPSCSNHDQNLWRFIWKLAIPEKVKIFLWRAAHDLLPTAENLW 870

Query: 294 RKKFLSHKQDQS 305
           +KK L     QS
Sbjct: 871 KKKVLQEPMCQS 881

BLAST of Lcy06g010140 vs. NCBI nr
Match: XP_024035599.1 (uncharacterized protein LOC112096407 [Citrus clementina])

HSP 1 Score: 177.2 bits (448), Expect = 2.3e-40
Identity = 83/193 (43.01%), Postives = 118/193 (61.14%), Query Frame = 0

Query: 54  EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
           +K   HW  WE+L Y+K +GGLGFR++S FNQ + AKQ WR++ + P+SL+ KV++ +Y+
Sbjct: 560 DKKGIHWGKWEKLSYAKIRGGLGFRDVSCFNQALLAKQGWRLL-QNPESLVAKVIKARYY 619

Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
           K+  FL   +GS+PS  WRSI WGR    KG RW++GN   I++    WI R      I 
Sbjct: 620 KNTDFLNAKVGSSPSFIWRSILWGRQVLQKGTRWRIGNGEKIQIQASNWIPRPTTFKLIV 679

Query: 174 CSPNLQGFTVNSLLDENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEIIWSMDKKGI 233
                 G  V+ L+  N  W E  I Q+F+ +DA+ I +  L     +DEIIW  D+KG+
Sbjct: 680 EPSLPTGAKVSELILPNQQWNESMINQSFARMDADIIKSILLPRTPQEDEIIWHYDRKGL 739

Query: 234 FSVKSAYHLAMSI 247
           +SVKS Y LA+ I
Sbjct: 740 YSVKSGYQLALKI 751

BLAST of Lcy06g010140 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-23
Identity = 63/214 (29.44%), Postives = 106/214 (49.53%), Query Frame = 0

Query: 54  EKNKYHWISWERLCYSKDKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 113
           E    HW +W+ L   K +GG+GF+++ AFN  +  KQ WR++  +P+SL+ KV + +YF
Sbjct: 35  EAKGMHWKAWDHLSCYKAEGGIGFKDIEAFNLALLGKQMWRML-SRPESLMAKVFKSRYF 94

Query: 114 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWINRQVNCTSIY 173
                L  PLGS PS  W+SI   ++   +G R  VGN   I + + +W++ +    ++ 
Sbjct: 95  HKSDPLNAPLGSRPSFVWKSIHASQEILRQGARAVVGNGEDIIIWRHKWLDSKPASAALR 154

Query: 174 CS--PNLQGFTVNSLL-------DENFAWKEESIRQNFSPLDAEDILNTALGNRLSKDEI 233
               P  +  +V+S+L       +    W+++ I   F  ++ + I     G R   D  
Sbjct: 155 MQRVPPQEYASVSSILKVSDLIDESGREWRKDVIEMLFPEVERKLIGELRPGGRRILDSY 214

Query: 234 IWSMDKKGIFSVKSAYHLAMSINNSSLASPSSIS 259
            W     G ++VKS Y +   I N   +SP  +S
Sbjct: 215 TWDYTSSGDYTVKSGYWVLTQIINKR-SSPQEVS 246

BLAST of Lcy06g010140 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-22
Identity = 51/110 (46.36%), Postives = 72/110 (65.45%), Query Frame = 0

Query: 55  KNKYHWISWERLCYSK-DKGGLGFRNLSAFNQVVFAKQSWRIIKKKPDSLLFKVLRGKYF 114
           K K  W++W++LC SK D GGLGFR+L  FNQ + AKQS+RII  +P +LL ++LR +YF
Sbjct: 36  KRKISWVAWQKLCKSKEDDGGLGFRDLGWFNQALLAKQSFRII-HQPHTLLSRLLRSRYF 95

Query: 115 KDECFLKVPLGSNPSLTWRSICWGRDSFSKGYRWKVGNENYIKVDKDRWI 164
                ++  +G+ PS  WRSI  GR+  S+G    +G+  + KV  DRWI
Sbjct: 96  PHSSMMECSVGTRPSYAWRSIIHGRELLSRGLLRTIGDGIHTKVWLDRWI 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
P932951.9e-2146.36Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
Match NameE-valueIdentityDescription
A0A6J1DRA01.7e-4945.81uncharacterized protein LOC111022423 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A1S8ACU23.6e-4444.24Ribonuclease H-like superfamily protein OS=Citrus limon OX=2708 PE=4 SV=1[more]
A0A6J1DAR45.4e-4040.57uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A803PPP46.0e-3936.63Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803PEK81.7e-3836.06Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022155286.13.5e-4945.81uncharacterized protein LOC111022423 [Momordica charantia][more]
XP_015388020.11.1e-4738.18uncharacterized protein LOC107177951 [Citrus sinensis][more]
XP_024038343.13.5e-4139.91uncharacterized protein LOC112097373 [Citrus clementina][more]
XP_024037590.11.3e-4039.68uncharacterized protein LOC112097210 [Citrus clementina][more]
XP_024035599.12.3e-4043.01uncharacterized protein LOC112096407 [Citrus clementina][more]
Match NameE-valueIdentityDescription
AT4G29090.11.2e-2329.44Ribonuclease H-like superfamily protein [more]
ATMG00310.11.3e-2246.36RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..315
NoneNo IPR availablePANTHERPTHR33116:SF41SUBFAMILY NOT NAMEDcoord: 58..245
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 58..245

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy06g010140.1Lcy06g010140.1mRNA