Lcy06g003590 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTTCGTTTCCTTCTTCTTCTTGGAGTTTTGGTCTTCCTCTGCCTTTCACAGGTAAACTTTTCTAGTTTCTCTTTTTCTTCCACTGAAATTTCCAATTACCCTTTGAAGAAAATGCTTCTATTTATTGTCTACTACTAAGTTTTTTGATAGAACAGAGAAGTCTCTTTCTTTCTCTCTCACTTTTCTTGCGGGTAGAAAATTAAACCATCAATATTTAGAATGATAATAGATGGTTTTGTCCACTAAACAATGCTCGAGTGGAGAGACGTTTAAGGGATATCACATGTGGGACAGGCTCCCTACTATTGTGATGAACACAACCAATATCTGCTTCATTATCAGACAGAAGTCAATTTGGGAACGTTTTAACCCAAGTTCTAGAATCATTTTCCTCACAAGCTCTTCGGGCCAGATTATGGGCCCTAGAAATGTGAATAAGAGAAGCATTCTCCCAGAATAAAAGAAGTCGTTTGGTTTCCTTAATGAGGAAACTCCGTTCGGCCGGTCATATATCTTCTTCATTATTAGTTTAGGAAAATAATAATGATAATTATCATTCAAGAAAAGACATAATATAAATAACTTTCTCAAATTTATAGGTTGAAAGCTAATAGAGACCGGAACATGAGCATATCTCAACTGACAAAGAGGTCTGTGATTTTAATCTCCAATCCCCACAAGTTGTCACTTGACCAGACCCTTGAGATCTCTAGAGTAGGCACTCCAAAACCTATTGGAGATTAAAATCAACAAATGTCAAAGCAAGGAATCAAAAGCACGACAAGTATCTTATTCATTGAACTAGGTTCGATTTTATGCAGGTGTCTTCCGATGGACACTCGGAAGAAGAGGAAGGGATGATGGCAATGAAAGATCATGGAGAAGTAGTGAGAGGGCCAAAGAGAAGGCTTATGCAGAACATAGGTGAGAAAATGGAGGAATTGGTTTTGTTTGAAAGAAAAAGGAAATTAGCAAAATTTGAGTGAAATGAATGAATGTAATTTTGCAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGGTGCATAAGGGCGTGCGGGACGTGCTGCTGGCGCTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACGCATGGCAACAGGACCAAGTGCCCTTGATTTCTCTTCCTACTACATTGGATTCTCTCTTTTTCTCTTAATTTTGTGTCTTCTTCTTCATTTCTCCATCTTTCTGTGTTTTTCCATTTAAGTCTATGTTCTTCCAACTTAGATTTTGATAATACCACTTTAACTTTTTATAATTATTTAAGTGAGTTCGAGCACAGTTTATCTTACTGATTATTA ATGGCGGTTCGTTTCCTTCTTCTTCTTGGAGTTTTGGTCTTCCTCTGCCTTTCACAGGTGTCTTCCGATGGACACTCGGAAGAAGAGGAAGGGATGATGGCAATGAAAGATCATGGAGAAGTAGTGAGAGGGCCAAAGAGAAGGCTTATGCAGAACATAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGGTGCATAAGGGCGTGCGGGACGTGCTGCTGGCGCTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACGCATGGCAACAGGACCAAGTGCCCTTGATTTCTCTTCCTACTACATTGGATTCTCTCTTTTTCTCTTAATTTTGTGTCTTCTTCTTCATTTCTCCATCTTTCTGTGTTTTTCCATTTAAGTCTATGTTCTTCCAACTTAGATTTTGATAATACCACTTTAACTTTTTATAATTATTTAAGTGAGTTCGAGCACAGTTTATCTTACTGATTATTA ATGGCGGTTCGTTTCCTTCTTCTTCTTGGAGTTTTGGTCTTCCTCTGCCTTTCACAGGTGTCTTCCGATGGACACTCGGAAGAAGAGGAAGGGATGATGGCAATGAAAGATCATGGAGAAGTAGTGAGAGGGCCAAAGAGAAGGCTTATGCAGAACATAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGGTGCATAAGGGCGTGCGGGACGTGCTGCTGGCGCTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACGCATGGCAACAGGACCAAGTGCCCTTGA MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP Homology
BLAST of Lcy06g003590 vs. ExPASy Swiss-Prot
Match: Q9LFR3 (Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 7.0e-19 Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Lcy06g003590 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 2.7e-18 Identity = 41/64 (64.06%), Postives = 45/64 (70.31%), Query Frame = 0
BLAST of Lcy06g003590 vs. ExPASy Swiss-Prot
Match: P46687 (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.5e-18 Identity = 49/114 (42.98%), Postives = 64/114 (56.14%), Query Frame = 0
BLAST of Lcy06g003590 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 8.6e-17 Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of Lcy06g003590 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.5e-16 Identity = 49/114 (42.98%), Postives = 62/114 (54.39%), Query Frame = 0
BLAST of Lcy06g003590 vs. ExPASy TrEMBL
Match: A0A1S3AVJ9 (snakin-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1) HSP 1 Score: 189.1 bits (479), Expect = 1.0e-44 Identity = 91/118 (77.12%), Postives = 101/118 (85.59%), Query Frame = 0
BLAST of Lcy06g003590 vs. ExPASy TrEMBL
Match: A0A0A0LW79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045890 PE=3 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 7.2e-43 Identity = 90/117 (76.92%), Postives = 100/117 (85.47%), Query Frame = 0
BLAST of Lcy06g003590 vs. ExPASy TrEMBL
Match: A0A1S3AW57 (snakin-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42 Identity = 91/126 (72.22%), Postives = 101/126 (80.16%), Query Frame = 0
BLAST of Lcy06g003590 vs. ExPASy TrEMBL
Match: V7CEP9 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G197400g PE=3 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37 Identity = 76/114 (66.67%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of Lcy06g003590 vs. ExPASy TrEMBL
Match: A0A6J1JZU9 (snakin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111490323 PE=3 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 2.0e-37 Identity = 82/122 (67.21%), Postives = 86/122 (70.49%), Query Frame = 0
BLAST of Lcy06g003590 vs. NCBI nr
Match: XP_008438104.1 (PREDICTED: snakin-2-like isoform X2 [Cucumis melo]) HSP 1 Score: 189.1 bits (479), Expect = 2.1e-44 Identity = 91/118 (77.12%), Postives = 101/118 (85.59%), Query Frame = 0
BLAST of Lcy06g003590 vs. NCBI nr
Match: XP_038895055.1 (snakin-2-like [Benincasa hispida]) HSP 1 Score: 183.7 bits (465), Expect = 8.7e-43 Identity = 91/117 (77.78%), Postives = 98/117 (83.76%), Query Frame = 0
BLAST of Lcy06g003590 vs. NCBI nr
Match: KGN64291.1 (hypothetical protein Csa_013222 [Cucumis sativus]) HSP 1 Score: 183.0 bits (463), Expect = 1.5e-42 Identity = 90/117 (76.92%), Postives = 100/117 (85.47%), Query Frame = 0
BLAST of Lcy06g003590 vs. NCBI nr
Match: XP_008438094.1 (PREDICTED: snakin-2-like isoform X1 [Cucumis melo]) HSP 1 Score: 181.8 bits (460), Expect = 3.3e-42 Identity = 91/126 (72.22%), Postives = 101/126 (80.16%), Query Frame = 0
BLAST of Lcy06g003590 vs. NCBI nr
Match: XP_007155392.1 (hypothetical protein PHAVU_003G197400g [Phaseolus vulgaris] >ESW27386.1 hypothetical protein PHAVU_003G197400g [Phaseolus vulgaris]) HSP 1 Score: 165.2 bits (417), Expect = 3.2e-37 Identity = 76/114 (66.67%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of Lcy06g003590 vs. TAIR 10
Match: AT5G14920.1 (Gibberellin-regulated family protein ) HSP 1 Score: 94.7 bits (234), Expect = 5.0e-20 Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Lcy06g003590 vs. TAIR 10
Match: AT4G09600.1 (GAST1 protein homolog 3 ) HSP 1 Score: 92.0 bits (227), Expect = 3.2e-19 Identity = 49/114 (42.98%), Postives = 64/114 (56.14%), Query Frame = 0
BLAST of Lcy06g003590 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 ) HSP 1 Score: 87.8 bits (216), Expect = 6.1e-18 Identity = 48/115 (41.74%), Postives = 62/115 (53.91%), Query Frame = 0
BLAST of Lcy06g003590 vs. TAIR 10
Match: AT2G18420.1 (Gibberellin-regulated family protein ) HSP 1 Score: 87.8 bits (216), Expect = 6.1e-18 Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0
BLAST of Lcy06g003590 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 ) HSP 1 Score: 87.0 bits (214), Expect = 1.0e-17 Identity = 49/114 (42.98%), Postives = 62/114 (54.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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