Lcy06g003590 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g003590
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	snakin-2-like
Location	Chr06: 3388158 .. 3389543 (+)
RNA-Seq Expression	Lcy06g003590
Synteny	Lcy06g003590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCGTTTCCTTCTTCTTCTTGGAGTTTTGGTCTTCCTCTGCCTTTCACAGGTAAACTTTTCTAGTTTCTCTTTTTCTTCCACTGAAATTTCCAATTACCCTTTGAAGAAAATGCTTCTATTTATTGTCTACTACTAAGTTTTTTGATAGAACAGAGAAGTCTCTTTCTTTCTCTCTCACTTTTCTTGCGGGTAGAAAATTAAACCATCAATATTTAGAATGATAATAGATGGTTTTGTCCACTAAACAATGCTCGAGTGGAGAGACGTTTAAGGGATATCACATGTGGGACAGGCTCCCTACTATTGTGATGAACACAACCAATATCTGCTTCATTATCAGACAGAAGTCAATTTGGGAACGTTTTAACCCAAGTTCTAGAATCATTTTCCTCACAAGCTCTTCGGGCCAGATTATGGGCCCTAGAAATGTGAATAAGAGAAGCATTCTCCCAGAATAAAAGAAGTCGTTTGGTTTCCTTAATGAGGAAACTCCGTTCGGCCGGTCATATATCTTCTTCATTATTAGTTTAGGAAAATAATAATGATAATTATCATTCAAGAAAAGACATAATATAAATAACTTTCTCAAATTTATAGGTTGAAAGCTAATAGAGACCGGAACATGAGCATATCTCAACTGACAAAGAGGTCTGTGATTTTAATCTCCAATCCCCACAAGTTGTCACTTGACCAGACCCTTGAGATCTCTAGAGTAGGCACTCCAAAACCTATTGGAGATTAAAATCAACAAATGTCAAAGCAAGGAATCAAAAGCACGACAAGTATCTTATTCATTGAACTAGGTTCGATTTTATGCAGGTGTCTTCCGATGGACACTCGGAAGAAGAGGAAGGGATGATGGCAATGAAAGATCATGGAGAAGTAGTGAGAGGGCCAAAGAGAAGGCTTATGCAGAACATAGGTGAGAAAATGGAGGAATTGGTTTTGTTTGAAAGAAAAAGGAAATTAGCAAAATTTGAGTGAAATGAATGAATGTAATTTTGCAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGGTGCATAAGGGCGTGCGGGACGTGCTGCTGGCGCTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACGCATGGCAACAGGACCAAGTGCCCTTGATTTCTCTTCCTACTACATTGGATTCTCTCTTTTTCTCTTAATTTTGTGTCTTCTTCTTCATTTCTCCATCTTTCTGTGTTTTTCCATTTAAGTCTATGTTCTTCCAACTTAGATTTTGATAATACCACTTTAACTTTTTATAATTATTTAAGTGAGTTCGAGCACAGTTTATCTTACTGATTATTA

mRNA sequence

ATGGCGGTTCGTTTCCTTCTTCTTCTTGGAGTTTTGGTCTTCCTCTGCCTTTCACAGGTGTCTTCCGATGGACACTCGGAAGAAGAGGAAGGGATGATGGCAATGAAAGATCATGGAGAAGTAGTGAGAGGGCCAAAGAGAAGGCTTATGCAGAACATAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGGTGCATAAGGGCGTGCGGGACGTGCTGCTGGCGCTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACGCATGGCAACAGGACCAAGTGCCCTTGATTTCTCTTCCTACTACATTGGATTCTCTCTTTTTCTCTTAATTTTGTGTCTTCTTCTTCATTTCTCCATCTTTCTGTGTTTTTCCATTTAAGTCTATGTTCTTCCAACTTAGATTTTGATAATACCACTTTAACTTTTTATAATTATTTAAGTGAGTTCGAGCACAGTTTATCTTACTGATTATTA

Coding sequence (CDS)

ATGGCGGTTCGTTTCCTTCTTCTTCTTGGAGTTTTGGTCTTCCTCTGCCTTTCACAGGTGTCTTCCGATGGACACTCGGAAGAAGAGGAAGGGATGATGGCAATGAAAGATCATGGAGAAGTAGTGAGAGGGCCAAAGAGAAGGCTTATGCAGAACATAGATTGTGGATGGGAGTGCAAGCGGCGGTGTGGGGCGCACTCGAGGCCGAACCGGTGCATAAGGGCGTGCGGGACGTGCTGCTGGCGCTGCAAGTGCGTGCCGCCGGGGACTTCAGGGAACCGTGAGATGTGCGGCACTTGCTACACCACCATGACCACGCATGGCAACAGGACCAAGTGCCCTTGA

Protein sequence

MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP

Homology

[Close]

BLAST of Lcy06g003590 vs. ExPASy Swiss-Prot
Match: Q9LFR3 (Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 7.0e-19
Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 53  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTK 112
           IDC   C  RCG HSR N C+RAC TCC+RCKCVPPGT GN+E CG+CY  M T G ++K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273

Query: 113 CP 115
           CP
Sbjct: 274 CP 275

[Close]

BLAST of Lcy06g003590 vs. ExPASy Swiss-Prot
Match: Q93X17 (Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.7e-18
Identity = 41/64 (64.06%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 51  QNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNR 110
           + IDCG  C  RC   SRP  C RACGTCC RC CVPPGTSGN E C  CY ++TTHGN+
Sbjct: 42  KKIDCGGACAARCRLSSRPRLCNRACGTCCARCNCVPPGTSGNTETC-PCYASLTTHGNK 101

Query: 111 TKCP 115
            KCP
Sbjct: 102 RKCP 104

[Close]

BLAST of Lcy06g003590 vs. ExPASy Swiss-Prot
Match: P46687 (Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.5e-18
Identity = 49/114 (42.98%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 1   MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECK 60
           MA+    L+ +L+  CL+      H+ E+  +      GE V          IDCG  CK
Sbjct: 1   MAIFRSTLVLLLILFCLTTFELHVHAAEDSQV------GEGV--------VKIDCGGRCK 60

Query: 61  RRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP 115
            RC   SRPN C+RAC +CC+RC CVPPGT+GN  +C  CY ++TT G R KCP
Sbjct: 61  GRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKCP 99

[Close]

BLAST of Lcy06g003590 vs. ExPASy Swiss-Prot
Match: F4IQJ4 (Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 8.6e-17
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 53  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTK 112
           IDC   C+ RC   SRPN C RACGTCC RC CV PGTSGN + C  CY ++TTHG R K
Sbjct: 34  IDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKC-PCYGSLTTHGGRRK 93

Query: 113 CP 115
           CP
Sbjct: 94  CP 94

[Close]

BLAST of Lcy06g003590 vs. ExPASy Swiss-Prot
Match: P46688 (Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-16
Identity = 49/114 (42.98%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 1   MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECK 60
           MAV    L+ +L+ +CL+      H+          D  +V  G     +  IDCG  CK
Sbjct: 1   MAVFRSTLVLLLIIVCLTTYELHVHA---------ADGAKVGEG-----VVKIDCGGRCK 60

Query: 61  RRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP 115
            RC   SR   C+RAC +CC RC CVPPGTSGN  +C  CY ++TTHG R KCP
Sbjct: 61  DRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLKCP 99

[Close]

BLAST of Lcy06g003590 vs. ExPASy TrEMBL
Match: A0A1S3AVJ9 (snakin-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.0e-44
Identity = 91/118 (77.12%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 1   MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMK-DHGEVVRGPKRRLMQNIDCG 60
           MAVR    LLLLGV VFLCLSQ+SSDG+ ++E GM  M+ D  +V+RG  RRLMQ IDCG
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60

Query: 61  WECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP 115
            ECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHGN+TKCP
Sbjct: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 118

[Close]

BLAST of Lcy06g003590 vs. ExPASy TrEMBL
Match: A0A0A0LW79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045890 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.2e-43
Identity = 90/117 (76.92%), Postives = 100/117 (85.47%), Query Frame = 0


Query: 1   MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGW 60
           MAVR    LLLLGV VFLCLSQVSS+G+  EEEGM  M+   +++RG  RRLMQ IDCG 
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQVSSNGY--EEEGMKEMEYDEKMMRGANRRLMQYIDCGG 60

Query: 61  ECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP 115
           +C+RRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHGNRTKCP
Sbjct: 61  QCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP 115

[Close]

BLAST of Lcy06g003590 vs. ExPASy TrEMBL
Match: A0A1S3AW57 (snakin-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.6e-42
Identity = 91/126 (72.22%), Postives = 101/126 (80.16%), Query Frame = 0


Query: 1   MAVR---FLLLLGVLVFLCLS--------QVSSDGHSEEEEGMMAMK-DHGEVVRGPKRR 60
           MAVR    LLLLGV VFLCLS        Q+SSDG+ ++E GM  M+ D  +V+RG  RR
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQLRRTHITQISSDGYQDQEAGMKEMEYDEDQVMRGANRR 60

Query: 61  LMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHG 115
           LMQ IDCG ECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHG
Sbjct: 61  LMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHG 120

[Close]

BLAST of Lcy06g003590 vs. ExPASy TrEMBL
Match: V7CEP9 (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G197400g PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.6e-37
Identity = 76/114 (66.67%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 1   MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECK 60
           MA+R LLL+G+ + +CL++VSSD + E+EE  +   D+  +VR   RRLMQ+IDCG  CK
Sbjct: 1   MALRELLLMGIFLLVCLAKVSSDVNIEKEENELPFPDNSLIVRDGNRRLMQDIDCGGLCK 60

Query: 61  RRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP 115
            RCG HSRPN C RACGTCC RCKCVPPGTSGNRE+CGTCYT MTTHGN+TKCP
Sbjct: 61  TRCGVHSRPNLCHRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP 114

[Close]

BLAST of Lcy06g003590 vs. ExPASy TrEMBL
Match: A0A6J1JZU9 (snakin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111490323 PE=3 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 2.0e-37
Identity = 82/122 (67.21%), Postives = 86/122 (70.49%), Query Frame = 0


Query: 1   MAVRFLLLLGVLVFLCLS--------QVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQN 60
           MA RFLLLLGVL FLCLS         V  DG+     G       G  VR P  R+M  
Sbjct: 1   MAARFLLLLGVLAFLCLSPASFLHGGSVGFDGNPGGGGG------GGGTVRRPNERVMTK 60

Query: 61  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTK 115
           IDCGWECKRRCGAHSRPNRC+R CGTCC RC CVPPGTSGNREMCGTCYT MTTHGN+TK
Sbjct: 61  IDCGWECKRRCGAHSRPNRCLRVCGTCCLRCNCVPPGTSGNREMCGTCYTGMTTHGNKTK 116

[Close]

BLAST of Lcy06g003590 vs. NCBI nr
Match: XP_008438104.1 (PREDICTED: snakin-2-like isoform X2 [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 2.1e-44
Identity = 91/118 (77.12%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 1   MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMK-DHGEVVRGPKRRLMQNIDCG 60
           MAVR    LLLLGV VFLCLSQ+SSDG+ ++E GM  M+ D  +V+RG  RRLMQ IDCG
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQISSDGYQDQEAGMKEMEYDEDQVMRGANRRLMQYIDCG 60

Query: 61  WECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP 115
            ECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHGN+TKCP
Sbjct: 61  GECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNKTKCP 118

[Close]

BLAST of Lcy06g003590 vs. NCBI nr
Match: XP_038895055.1 (snakin-2-like [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 8.7e-43
Identity = 91/117 (77.78%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 1   MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGW 60
           MAVR    LLLLG+ V L LSQVSSDG+   EEGMM M+   +V+RG  RRLMQNI+CGW
Sbjct: 1   MAVRNFLLLLLLGLFVILSLSQVSSDGY--PEEGMMEMEYDEKVMRGTNRRLMQNINCGW 60

Query: 61  ECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP 115
           ECKRRCGAHSRPNRCIRACGTCC RCKCVP GTSGNREMCGTCYT MTTHGN+TKCP
Sbjct: 61  ECKRRCGAHSRPNRCIRACGTCCSRCKCVPSGTSGNREMCGTCYTNMTTHGNKTKCP 115

[Close]

BLAST of Lcy06g003590 vs. NCBI nr
Match: KGN64291.1 (hypothetical protein Csa_013222 [Cucumis sativus])

HSP 1 Score: 183.0 bits (463), Expect = 1.5e-42
Identity = 90/117 (76.92%), Postives = 100/117 (85.47%), Query Frame = 0


Query: 1   MAVR---FLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGW 60
           MAVR    LLLLGV VFLCLSQVSS+G+  EEEGM  M+   +++RG  RRLMQ IDCG 
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQVSSNGY--EEEGMKEMEYDEKMMRGANRRLMQYIDCGG 60

Query: 61  ECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP 115
           +C+RRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHGNRTKCP
Sbjct: 61  QCRRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHGNRTKCP 115

[Close]

BLAST of Lcy06g003590 vs. NCBI nr
Match: XP_008438094.1 (PREDICTED: snakin-2-like isoform X1 [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 3.3e-42
Identity = 91/126 (72.22%), Postives = 101/126 (80.16%), Query Frame = 0


Query: 1   MAVR---FLLLLGVLVFLCLS--------QVSSDGHSEEEEGMMAMK-DHGEVVRGPKRR 60
           MAVR    LLLLGV VFLCLS        Q+SSDG+ ++E GM  M+ D  +V+RG  RR
Sbjct: 1   MAVRKFLLLLLLGVFVFLCLSQLRRTHITQISSDGYQDQEAGMKEMEYDEDQVMRGANRR 60

Query: 61  LMQNIDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHG 115
           LMQ IDCG ECKRRCGAHSRPNRCIRACGTCC RC+CVPPGTSGNREMCGTCYT+MTTHG
Sbjct: 61  LMQYIDCGGECKRRCGAHSRPNRCIRACGTCCRRCRCVPPGTSGNREMCGTCYTSMTTHG 120

[Close]

BLAST of Lcy06g003590 vs. NCBI nr
Match: XP_007155392.1 (hypothetical protein PHAVU_003G197400g [Phaseolus vulgaris] >ESW27386.1 hypothetical protein PHAVU_003G197400g [Phaseolus vulgaris])

HSP 1 Score: 165.2 bits (417), Expect = 3.2e-37
Identity = 76/114 (66.67%), Postives = 91/114 (79.82%), Query Frame = 0


Query: 1   MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECK 60
           MA+R LLL+G+ + +CL++VSSD + E+EE  +   D+  +VR   RRLMQ+IDCG  CK
Sbjct: 1   MALRELLLMGIFLLVCLAKVSSDVNIEKEENELPFPDNSLIVRDGNRRLMQDIDCGGLCK 60

Query: 61  RRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP 115
            RCG HSRPN C RACGTCC RCKCVPPGTSGNRE+CGTCYT MTTHGN+TKCP
Sbjct: 61  TRCGVHSRPNLCHRACGTCCVRCKCVPPGTSGNRELCGTCYTDMTTHGNKTKCP 114

[Close]

BLAST of Lcy06g003590 vs. TAIR 10
Match: AT5G14920.1 (Gibberellin-regulated family protein )

HSP 1 Score: 94.7 bits (234), Expect = 5.0e-20
Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0


Query: 53  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTK 112
           IDC   C  RCG HSR N C+RAC TCC+RCKCVPPGT GN+E CG+CY  M T G ++K
Sbjct: 214 IDCVPLCGTRCGQHSRKNVCMRACVTCCYRCKCVPPGTYGNKEKCGSCYANMKTRGGKSK 273

Query: 113 CP 115
           CP
Sbjct: 274 CP 275

[Close]

BLAST of Lcy06g003590 vs. TAIR 10
Match: AT4G09600.1 (GAST1 protein homolog 3 )

HSP 1 Score: 92.0 bits (227), Expect = 3.2e-19
Identity = 49/114 (42.98%), Postives = 64/114 (56.14%), Query Frame = 0


Query: 1   MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECK 60
           MA+    L+ +L+  CL+      H+ E+  +      GE V          IDCG  CK
Sbjct: 1   MAIFRSTLVLLLILFCLTTFELHVHAAEDSQV------GEGV--------VKIDCGGRCK 60

Query: 61  RRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP 115
            RC   SRPN C+RAC +CC+RC CVPPGT+GN  +C  CY ++TT G R KCP
Sbjct: 61  GRCSKSSRPNLCLRACNSCCYRCNCVPPGTAGNHHLC-PCYASITTRGGRLKCP 99

[Close]

BLAST of Lcy06g003590 vs. TAIR 10
Match: AT1G75750.2 (GAST1 protein homolog 1 )

HSP 1 Score: 87.8 bits (216), Expect = 6.1e-18
Identity = 48/115 (41.74%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 1   MAVRFLLLLGVLV-FLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWEC 60
           MA+   L+  +L+  L L  V +D +S+++ G                   + IDCG  C
Sbjct: 1   MAISKALIASLLISLLVLQLVQADENSQKKNG-----------------YAKKIDCGSAC 60

Query: 61  KRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP 115
             RC    RP  C RACGTCC+RC CVPPGT GN + C  CY ++TTHG R KCP
Sbjct: 61  VARCRLSRRPRLCHRACGTCCYRCNCVPPGTYGNYDKC-QCYASLTTHGGRRKCP 97

[Close]

BLAST of Lcy06g003590 vs. TAIR 10
Match: AT2G18420.1 (Gibberellin-regulated family protein )

HSP 1 Score: 87.8 bits (216), Expect = 6.1e-18
Identity = 39/62 (62.90%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 53  IDCGWECKRRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTK 112
           IDC   C+ RC   SRPN C RACGTCC RC CV PGTSGN + C  CY ++TTHG R K
Sbjct: 34  IDCNSRCQERCSLSSRPNLCHRACGTCCARCNCVAPGTSGNYDKC-PCYGSLTTHGGRRK 93

Query: 113 CP 115
           CP
Sbjct: 94  CP 94

[Close]

BLAST of Lcy06g003590 vs. TAIR 10
Match: AT4G09610.1 (GAST1 protein homolog 2 )

HSP 1 Score: 87.0 bits (214), Expect = 1.0e-17
Identity = 49/114 (42.98%), Postives = 62/114 (54.39%), Query Frame = 0


Query: 1   MAVRFLLLLGVLVFLCLSQVSSDGHSEEEEGMMAMKDHGEVVRGPKRRLMQNIDCGWECK 60
           MAV    L+ +L+ +CL+      H+          D  +V  G     +  IDCG  CK
Sbjct: 1   MAVFRSTLVLLLIIVCLTTYELHVHA---------ADGAKVGEG-----VVKIDCGGRCK 60

Query: 61  RRCGAHSRPNRCIRACGTCCWRCKCVPPGTSGNREMCGTCYTTMTTHGNRTKCP 115
            RC   SR   C+RAC +CC RC CVPPGTSGN  +C  CY ++TTHG R KCP
Sbjct: 61  DRCSKSSRTKLCLRACNSCCSRCNCVPPGTSGNTHLC-PCYASITTHGGRLKCP 99

The following BLAST results are available for this feature:

BLAST of Lcy06g003590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFR3	7.0e-19	64.52	Gibberellin-regulated protein 14 OS=Arabidopsis thaliana OX=3702 GN=GASA14 PE=1 ...	[more]
Q93X17	2.7e-18	64.06	Snakin-2 OS=Solanum tuberosum OX=4113 GN=SN2 PE=1 SV=1	[more]
P46687	4.5e-18	42.98	Gibberellin-regulated protein 3 OS=Arabidopsis thaliana OX=3702 GN=GASA3 PE=2 SV...	[more]
F4IQJ4	8.6e-17	62.90	Gibberellin-regulated protein 11 OS=Arabidopsis thaliana OX=3702 GN=GASA11 PE=3 ...	[more]
P46688	1.5e-16	42.98	Gibberellin-regulated protein 2 OS=Arabidopsis thaliana OX=3702 GN=GASA2 PE=2 SV...	[more]

BLAST of Lcy06g003590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3AVJ9	1.0e-44	77.12	snakin-2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1	[more]
A0A0A0LW79	7.2e-43	76.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G045890 PE=3 SV=1	[more]
A0A1S3AW57	1.6e-42	72.22	snakin-2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483303 PE=3 SV=1	[more]
V7CEP9	1.6e-37	66.67	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_003G197400g PE=3 ...	[more]
A0A6J1JZU9	2.0e-37	67.21	snakin-2-like OS=Cucurbita maxima OX=3661 GN=LOC111490323 PE=3 SV=1	[more]

BLAST of Lcy06g003590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008438104.1	2.1e-44	77.12	PREDICTED: snakin-2-like isoform X2 [Cucumis melo]	[more]
XP_038895055.1	8.7e-43	77.78	snakin-2-like [Benincasa hispida]	[more]
KGN64291.1	1.5e-42	76.92	hypothetical protein Csa_013222 [Cucumis sativus]	[more]
XP_008438094.1	3.3e-42	72.22	PREDICTED: snakin-2-like isoform X1 [Cucumis melo]	[more]
XP_007155392.1	3.2e-37	66.67	hypothetical protein PHAVU_003G197400g [Phaseolus vulgaris] >ESW27386.1 hypothet...	[more]

BLAST of Lcy06g003590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14920.1	5.0e-20	64.52	Gibberellin-regulated family protein	[more]
AT4G09600.1	3.2e-19	42.98	GAST1 protein homolog 3	[more]
AT1G75750.2	6.1e-18	41.74	GAST1 protein homolog 1	[more]
AT2G18420.1	6.1e-18	62.90	Gibberellin-regulated family protein	[more]
AT4G09610.1	1.0e-17	42.98	GAST1 protein homolog 2	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003854	Gibberellin regulated protein	PFAM	PF02704	GASA	coord: 54..114 e-value: 9.9E-20 score: 70.5
None	No IPR available	PANTHER	PTHR23201:SF18	GIBBERELLIN-REGULATED PROTEIN 2-RELATED	coord: 4..114
None	No IPR available	PANTHER	PTHR23201	EXTENSIN, PROLINE-RICH PROTEIN	coord: 4..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g003590.1	Lcy06g003590.1	mRNA