Lcy06g002080 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy06g002080
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Reticulon-like protein
Location	Chr06: 2005287 .. 2007303 (+)
RNA-Seq Expression	Lcy06g002080
Synteny	Lcy06g002080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCATATCCCACAAGCCATTCCTTCCTTTAACTTGGCTTTCTTTACTACCAAGCTTAGAACCCTTATCTCTTTCATATACACCTCATGAATTTAACCTAGTTCCCACAGCCATTCCAAAATCTCAAAACAAAACTCTACCTCGTATTCGACCCGTATCCCGACTTCCGAAGCATATCATGCCGACCTACTCCTCCGACTCCGACGATGATTTGGTACCTCCATCGAAGCTCTTCGGACGCCGCCGTCCCATACATGATATTCTTGGAGGAGGGAAAGGTAAGAGCTTTAGCAACTAATTAACTAATTTACTCGCTCGTTCTTATTTGTGATATTTAAAGTGAGAAAAATTGAAGCCTGCAACCAATGGCGGGTAATAAAGTAATTAATCGATAGGCTCGAGATTTGGTTTTTTTTATTACAATGAACTTTTTTTGTGAGGAAATATTGTTGCTTTTCTATGCTAAATCTATTGGAGAGGGGTTTCAATTCTTGATGTTTTGTTGATGAAGTTGCGGACATCTTGTTGTGGAAAGACACAAAGCTGTCGGCTGCATTGCTGTTTGGGGCGACAGTGGTATGGTTTCTGTTTGAGGTTGTTGAATACAACTTTGTCACCCTCATCTGCCACCTCTCTATCACCTCCATGCTCATCTTCTTCATTTGGTGCACAGGAGCTGAAATTTTCAAATGGTATGTTTCCGCTCCGCCGTTACTGCTTAACGATCTTCTCTAATACACATCCGTGCAATCGAAATATTACTCCGTCTCATTGTTTAAAAGTCAGCACAATATCTTCATTGATACAAATACTTTTAATCTTTTGGTTGTAGATATAAAATCTTAACTAGTTGTCGTTTGCTTGATTATATATTTGTTGATAAATTTGGGATGATGATCAGGAATGCTCCACAGTTGCCTGAAGTGATATTAAAAGCATCAGCATTCAATGAAGTTGCCTCCACTTTCCACAGAAAAATCAACCAATTCTTATCTAAGATTTTCGACATCGCTTATGGAAAAGATCTCCCGCTCTTCTTTCTGGTATATATACATATGTTCAAATTTAGTCTTCGTATTACTAATAAATTTTTAAAGAGAAATTATTTACACACCGAACAAGTAGAGCTCGTAACTTTCTAACGTGGGTTATTTGTAGTAGCTCTTAAAACTACTCGTGAAATTCACTTACCAATTAAATGCAATAAAAATAGATCAATAAAAGCAACTAACTCAAGATAAAATTAGATTAATTTAGTTGAAGAGTGAAGTGGAGGATATTTAATTTTCTTGCTACTTTCAGGCAATCGTTTCTCTGTATCTTTTGTCGGTGATTGGATCGTACGTTAGCTTTCTGAATCTCCTTTATTTCGGTAAGAAATTAGAGATCTCATTCTCACTCAAAGAATTGTTAACATTTTCACTTTCTCAGACATTAAATCTTTAAATTAACTTTTTGGTGGTCTTTAATTTATTTTGTGTTGAAAAATCAAATTAAATGAAGGATTTGTGGCGTTGGAAACTCTGCCATTTCTGTACGAAAAGTATGAAGAAGAAGTTGATCATTTTGCTGGAAAGGCCATTTATCAGACCAAGAAATCTTACAGAGATTTCGATGCCAAGTTCCTCAATAAGATCCCAAGAGGACCTGTCAAAGATAAGAAACTCAGATGATCGAAGAACAAAAGGATAATTTGGATGAATAATTGCTTTGTTACTATAAATAATGCGTTTTCAATGTAATAAATTCTCTCTAAATAATCGAAGAACAGAAGGGAATATCGGTTTTTATTGTTTGTTTATAAGCTCTTTCTTTGGCTTGTTATGAATGGTTGTTTGTGATTTTTTTTTTTTTCAGTTCAACAACATTTGAGAGTGGTGGAATAAACGATGATACGTGTCAATTTGTGGGGAATGTTAATGTTACAATAAGAGTAGTTAATTATTGATTAAAAAAATGTGTGAAGAAGCTTGGGATATGTTTATGTAGTGATGGGTGTTCCTCTCTAGAGTTAAATTT

mRNA sequence

CCATATCCCACAAGCCATTCCTTCCTTTAACTTGGCTTTCTTTACTACCAAGCTTAGAACCCTTATCTCTTTCATATACACCTCATGAATTTAACCTAGTTCCCACAGCCATTCCAAAATCTCAAAACAAAACTCTACCTCGTATTCGACCCGTATCCCGACTTCCGAAGCATATCATGCCGACCTACTCCTCCGACTCCGACGATGATTTGGTACCTCCATCGAAGCTCTTCGGACGCCGCCGTCCCATACATGATATTCTTGGAGGAGGGAAAGTTGCGGACATCTTGTTGTGGAAAGACACAAAGCTGTCGGCTGCATTGCTGTTTGGGGCGACAGTGGTATGGTTTCTGTTTGAGGTTGTTGAATACAACTTTGTCACCCTCATCTGCCACCTCTCTATCACCTCCATGCTCATCTTCTTCATTTGGTGCACAGGAGCTGAAATTTTCAAATGGAATGCTCCACAGTTGCCTGAAGTGATATTAAAAGCATCAGCATTCAATGAAGTTGCCTCCACTTTCCACAGAAAAATCAACCAATTCTTATCTAAGATTTTCGACATCGCTTATGGAAAAGATCTCCCGCTCTTCTTTCTGGCAATCGTTTCTCTGTATCTTTTGTCGGTGATTGGATCGTACGTTAGCTTTCTGAATCTCCTTTATTTCGGATTTGTGGCGTTGGAAACTCTGCCATTTCTGTACGAAAAGTATGAAGAAGAAGTTGATCATTTTGCTGGAAAGGCCATTTATCAGACCAAGAAATCTTACAGAGATTTCGATGCCAAGTTCCTCAATAAGATCCCAAGAGGACCTGTCAAAGATAAGAAACTCAGATGATCGAAGAACAAAAGGATAATTTGGATGAATAATTGCTTTGTTACTATAAATAATGCGTTTTCAATGTAATAAATTCTCTCTAAATAATCGAAGAACAGAAGGGAATATCGGTTTTTATTGTTTGTTTATAAGCTCTTTCTTTGGCTTGTTATGAATGGTTGTTTGTGATTTTTTTTTTTTTCAGTTCAACAACATTTGAGAGTGGTGGAATAAACGATGATACGTGTCAATTTGTGGGGAATGTTAATGTTACAATAAGAGTAGTTAATTATTGATTAAAAAAATGTGTGAAGAAGCTTGGGATATGTTTATGTAGTGATGGGTGTTCCTCTCTAGAGTTAAATTT

Coding sequence (CDS)

ATGCCGACCTACTCCTCCGACTCCGACGATGATTTGGTACCTCCATCGAAGCTCTTCGGACGCCGCCGTCCCATACATGATATTCTTGGAGGAGGGAAAGTTGCGGACATCTTGTTGTGGAAAGACACAAAGCTGTCGGCTGCATTGCTGTTTGGGGCGACAGTGGTATGGTTTCTGTTTGAGGTTGTTGAATACAACTTTGTCACCCTCATCTGCCACCTCTCTATCACCTCCATGCTCATCTTCTTCATTTGGTGCACAGGAGCTGAAATTTTCAAATGGAATGCTCCACAGTTGCCTGAAGTGATATTAAAAGCATCAGCATTCAATGAAGTTGCCTCCACTTTCCACAGAAAAATCAACCAATTCTTATCTAAGATTTTCGACATCGCTTATGGAAAAGATCTCCCGCTCTTCTTTCTGGCAATCGTTTCTCTGTATCTTTTGTCGGTGATTGGATCGTACGTTAGCTTTCTGAATCTCCTTTATTTCGGATTTGTGGCGTTGGAAACTCTGCCATTTCTGTACGAAAAGTATGAAGAAGAAGTTGATCATTTTGCTGGAAAGGCCATTTATCAGACCAAGAAATCTTACAGAGATTTCGATGCCAAGTTCCTCAATAAGATCCCAAGAGGACCTGTCAAAGATAAGAAACTCAGATGA

Protein sequence

MPTYSSDSDDDLVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLFEVVEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKINQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDHFAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKKLR

Homology

[Close]

BLAST of Lcy06g002080 vs. ExPASy Swiss-Prot
Match: Q9LJQ5 (Reticulon-like protein B9 OS=Arabidopsis thaliana OX=3702 GN=RTNLB9 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 9.5e-65
Identity = 117/216 (54.17%), Postives = 164/216 (75.93%), Query Frame = 0


Query: 5   SSDSDDD--LVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLFEV 64
           SSDS+D+  +   +KLF R+R IH I GGGKVADILLW++ K++A L+ G +++WFL EV
Sbjct: 8   SSDSEDERTIHKTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEV 67

Query: 65  VEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKINQ 124
           VEYNF+TLICH S+TSML FFIW T ++   W  P +PEV+L  S+F ++A +FH + NQ
Sbjct: 68  VEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQ 127

Query: 125 FLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEE 184
            L+K+ D+A G+D PLFFL  +SLY++S+IG+Y +F+NLL+ GFV+++TLP +YE YE++
Sbjct: 128 ILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDD 187

Query: 185 VDHFAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKK 219
           VD  AGK + + KK Y+  D   L+KIPRG VK+KK
Sbjct: 188 VDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKK 223

[Close]

BLAST of Lcy06g002080 vs. ExPASy Swiss-Prot
Match: Q9SUT9 (Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.0e-46
Identity = 90/202 (44.55%), Postives = 132/202 (65.35%), Query Frame = 0


Query: 17  KLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLFEVVEYNFVTLICHLSI 76
           +LFGR RP+H +LGGGK ADI +WKD K+S  +  GATV W LFE++EY+ +TL+CH+ I
Sbjct: 68  RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMI 127

Query: 77  TSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKINQFLSKIFDIAYGKDL 136
            ++ + F+W         + P++PEV +      ++AS    +IN+ +S + +IA G+D+
Sbjct: 128 VALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDI 187

Query: 137 PLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDHFAGKAIYQTKK 196
             F  AI  L++LS++G   SFL L Y   V L T+P  Y+KYE++VD +  KA+ + KK
Sbjct: 188 KKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247

Query: 197 SYRDFDAKFLNKIPRGPVKDKK 219
            Y   DAK  +KIPRGP+KDKK
Sbjct: 248 QYAVLDAKVFSKIPRGPLKDKK 269

[Close]

BLAST of Lcy06g002080 vs. ExPASy Swiss-Prot
Match: O82352 (Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.4e-44
Identity = 88/201 (43.78%), Postives = 135/201 (67.16%), Query Frame = 0


Query: 17  KLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLFEVVEYNFVTLICHLSI 76
           ++FGR +P+H +LGGGK AD+ LW+D KLS A+L  AT +W LFE+VEY+ ++L+CH+SI
Sbjct: 51  RMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISI 110

Query: 77  TSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKINQFLSKIFDIAYGKDL 136
            ++   F+W     +    +PQ+PE+ +   AF  VAS+   ++NQ    +  IA G+DL
Sbjct: 111 LALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDL 170

Query: 137 PLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDHFAGKAIYQTKK 196
             F + +V L+++SV+G++ +FL L+Y  FV L T+P LYEK+E++VD  A KA+ + +K
Sbjct: 171 KKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQK 230

Query: 197 SYRDFDAKFLNKIPRGPVKDK 218
            Y  FD K L+KIP   +K K
Sbjct: 231 QYVVFDEKVLSKIPIASLKAK 251

[Close]

BLAST of Lcy06g002080 vs. ExPASy Swiss-Prot
Match: Q9SUR3 (Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 6.0e-43
Identity = 85/202 (42.08%), Postives = 129/202 (63.86%), Query Frame = 0


Query: 17  KLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLFEVVEYNFVTLICHLSI 76
           +LFGR +P+H +LGGGK ADI +WK+ K+S  +L GAT  W +FE++EY+ +TL+CH+ I
Sbjct: 72  RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131

Query: 77  TSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKINQFLSKIFDIAYGKDL 136
             + + F+W         + P++PEV +      ++AS    +IN+  S + +IA G+DL
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191

Query: 137 PLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDHFAGKAIYQTKK 196
             F +AI  L++LS++G   +FL L Y   V L T+P  Y+KYE++VD    KA+ + KK
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251

Query: 197 SYRDFDAKFLNKIPRGPVKDKK 219
            Y   D K L+KIP GP+K+KK
Sbjct: 252 QYAVLDEKVLSKIPLGPLKNKK 273

[Close]

BLAST of Lcy06g002080 vs. ExPASy Swiss-Prot
Match: Q9SH59 (Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1)

HSP 1 Score: 170.2 bits (430), Expect = 2.5e-41
Identity = 94/218 (43.12%), Postives = 135/218 (61.93%), Query Frame = 0


Query: 5   SSDSDDDLVPPS------KLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWF 64
           SSDSDDD    S      +LFGR +P+H + GGGK ADI LW++ K+S  +L  ATV W 
Sbjct: 29  SSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWI 88

Query: 65  LFEVVEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHR 124
           LFE++EYN +TL  H+SI ++ + F+W + +     +   +PEV +      ++AS    
Sbjct: 89  LFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRI 148

Query: 125 KINQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEK 184
           +IN+  + + DIA G+DL  F L I  L++LS +GS  +FL L+Y   V L T+P LYEK
Sbjct: 149 EINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEK 208

Query: 185 YEEEVDHFAGKAIYQTKKSYRDFDAKFL----NKIPRG 213
           YE++VD F  KA+ + KK Y +FD K L    +KIP+G
Sbjct: 209 YEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKG 246

[Close]

BLAST of Lcy06g002080 vs. ExPASy TrEMBL
Match: A0A6J1C7F6 (Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111008946 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 189/220 (85.91%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MPTYSSDSDDDLVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLF 60
           MP YS   DD   PPSKLFGRRRPI +ILGGG+VAD+LLWK+TKLSAALL G TVVWFLF
Sbjct: 1   MPIYSDSDDDSAPPPSKLFGRRRPIREILGGGRVADMLLWKNTKLSAALLLGMTVVWFLF 60

Query: 61  EVVEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKI 120
           EVVEYNFVTLICHLSITSML+FFIWCTGAEIFKW+ P+LPEVILK SAF EVASTFH +I
Sbjct: 61  EVVEYNFVTLICHLSITSMLVFFIWCTGAEIFKWDPPRLPEVILKESAFKEVASTFHTRI 120

Query: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYE 180
           NQFL+K+FDIAYG+DLPLFFLAIV LYLLSVIGSY+SFLNLLYFGFVA+ETLPFLYEKYE
Sbjct: 121 NQFLAKLFDIAYGRDLPLFFLAIVCLYLLSVIGSYISFLNLLYFGFVAMETLPFLYEKYE 180

Query: 181 EEVDHFAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKKLR 221
           EEVDHFAGKAIYQTKKSYR+FD+KFLNKIPRGPVKDKK+R
Sbjct: 181 EEVDHFAGKAIYQTKKSYRNFDSKFLNKIPRGPVKDKKVR 220

[Close]

BLAST of Lcy06g002080 vs. ExPASy TrEMBL
Match: A0A6J1GT81 (Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456766 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 1.4e-103
Identity = 193/220 (87.73%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MPTYSSDSDDDLVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLF 60
           M TY +DSDDD   PSKLFGRRRP+H+ILGGGKVADILLW+DTK+S ALL G T +WFLF
Sbjct: 1   MSTY-TDSDDDSAAPSKLFGRRRPVHEILGGGKVADILLWRDTKMSGALLLGMTTLWFLF 60

Query: 61  EVVEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKI 120
           EVVEY FVTL+CHLSITSMLIFFIWCTGAEIFKWN P+LPEVILK SAF EVASTFHR+I
Sbjct: 61  EVVEYKFVTLVCHLSITSMLIFFIWCTGAEIFKWNPPRLPEVILKDSAFKEVASTFHRRI 120

Query: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYE 180
           NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNL+YFGFVALETLPFLY KYE
Sbjct: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLVYFGFVALETLPFLYVKYE 180

Query: 181 EEVDHFAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKKLR 221
           EEVDH AGKAIY TKKSYR+FDAKFLNKIPRGPVKDKKLR
Sbjct: 181 EEVDHLAGKAIYHTKKSYRNFDAKFLNKIPRGPVKDKKLR 219

[Close]

BLAST of Lcy06g002080 vs. ExPASy TrEMBL
Match: A0A6J1K5V9 (Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111490348 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 3.2e-103
Identity = 193/220 (87.73%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MPTYSSDSDDDLVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLF 60
           M TY +DSDDD   PSKLFGRRRP+H+ILGGGKVADILLW+D+K+S ALL G T +WFLF
Sbjct: 1   MSTY-TDSDDDSAAPSKLFGRRRPVHEILGGGKVADILLWRDSKMSGALLLGMTTLWFLF 60

Query: 61  EVVEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKI 120
           EVVEY FVTLICHLSITSMLIFFIWCTGAEIFKWN P+LPEVILK SAF EVASTFHR+I
Sbjct: 61  EVVEYKFVTLICHLSITSMLIFFIWCTGAEIFKWNPPRLPEVILKDSAFKEVASTFHRRI 120

Query: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYE 180
           NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNL+YFGFVALETLPFLY KYE
Sbjct: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLVYFGFVALETLPFLYVKYE 180

Query: 181 EEVDHFAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKKLR 221
           EEVDH AGKAIY TKKSYR+FDAKFLNKIPRGPVKDKKLR
Sbjct: 181 EEVDHLAGKAIYHTKKSYRNFDAKFLNKIPRGPVKDKKLR 219

[Close]

BLAST of Lcy06g002080 vs. ExPASy TrEMBL
Match: A0A1S3CEE6 (Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103499764 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.0e-101
Identity = 188/215 (87.44%), Postives = 197/215 (91.63%), Query Frame = 0


Query: 6   SDSDDDLVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLFEVVEY 65
           SDSDDD VP SKLFGRRRPIHDI GGG+VADILLWKD K+SA LL G TV+WFLFEVVEY
Sbjct: 5   SDSDDDSVPRSKLFGRRRPIHDIFGGGRVADILLWKDKKMSAGLLLGMTVLWFLFEVVEY 64

Query: 66  NFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKINQFLS 125
           NFVTLICH+SITSMLIFFIWCTGAE FKWN P+ PE ILK S F +VAST HR+INQFL 
Sbjct: 65  NFVTLICHISITSMLIFFIWCTGAEFFKWNPPRFPEAILKESTFKDVASTLHRRINQFLI 124

Query: 126 KIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDH 185
           KIFDIAYGKDLPLFFLAIVSLYLLSVIGSY+SFLNLLYFGFVALETLPFLYEKYEEEVD 
Sbjct: 125 KIFDIAYGKDLPLFFLAIVSLYLLSVIGSYISFLNLLYFGFVALETLPFLYEKYEEEVDQ 184

Query: 186 FAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKKLR 221
           FAGKAI QTKKSYR+FDAKFLNKIPRGPVKDKKLR
Sbjct: 185 FAGKAISQTKKSYRNFDAKFLNKIPRGPVKDKKLR 219

[Close]

BLAST of Lcy06g002080 vs. ExPASy TrEMBL
Match: A0A0A0LTQ2 (Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G042570 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 5.6e-100
Identity = 186/215 (86.51%), Postives = 196/215 (91.16%), Query Frame = 0


Query: 6   SDSDDDLVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLFEVVEY 65
           SDSDDD VP SKLFGRRRP++DI GGG+VADILLWKD K SA LL G TV+WFLFE+VEY
Sbjct: 5   SDSDDDSVPRSKLFGRRRPVYDIFGGGRVADILLWKDKKKSAGLLLGMTVLWFLFEIVEY 64

Query: 66  NFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKINQFLS 125
           NFVTLICHLSITSMLIFFIWCTGAE FKWN P+LPE ILK S F +VAST HR+INQF +
Sbjct: 65  NFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRLPEAILKESTFKDVASTLHRRINQFFT 124

Query: 126 KIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDH 185
           KIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVD 
Sbjct: 125 KIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDQ 184

Query: 186 FAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKKLR 221
            AG AIYQTKKSYR+FDAKFLNKIPRGPVKDKKLR
Sbjct: 185 LAGMAIYQTKKSYRNFDAKFLNKIPRGPVKDKKLR 219

[Close]

BLAST of Lcy06g002080 vs. NCBI nr
Match: XP_038895119.1 (reticulon-like protein B9 [Benincasa hispida])

HSP 1 Score: 386.7 bits (992), Expect = 1.3e-103
Identity = 195/220 (88.64%), Postives = 203/220 (92.27%), Query Frame = 0


Query: 1   MPTYSSDSDDDLVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLF 60
           M TY SDSDDD VPPSKLFGRRRPIH+I GGG+VADILLWKDTKLSA LL G TV+WFLF
Sbjct: 1   MSTY-SDSDDDSVPPSKLFGRRRPIHEIFGGGRVADILLWKDTKLSAGLLLGMTVLWFLF 60

Query: 61  EVVEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKI 120
           EVVEYNFVTLICHLSITSMLIFFIWCTGAE FKWN P+ PE ILK S F EVASTFH++I
Sbjct: 61  EVVEYNFVTLICHLSITSMLIFFIWCTGAEFFKWNPPRFPEAILKESTFKEVASTFHKRI 120

Query: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYE 180
           NQFL+KIFDIAYGKDLPLFFLAIVSLYLLSVIGSY SFLNLLYFGFVALETLPFLYEKYE
Sbjct: 121 NQFLTKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYFSFLNLLYFGFVALETLPFLYEKYE 180

Query: 181 EEVDHFAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKKLR 221
           EEVD FAGKAI QTKKSYR+FDAKFLNKIPRGPVKDKKLR
Sbjct: 181 EEVDQFAGKAISQTKKSYRNFDAKFLNKIPRGPVKDKKLR 219

[Close]

BLAST of Lcy06g002080 vs. NCBI nr
Match: XP_022137519.1 (reticulon-like protein B9 [Momordica charantia])

HSP 1 Score: 386.0 bits (990), Expect = 2.2e-103
Identity = 189/220 (85.91%), Postives = 205/220 (93.18%), Query Frame = 0


Query: 1   MPTYSSDSDDDLVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLF 60
           MP YS   DD   PPSKLFGRRRPI +ILGGG+VAD+LLWK+TKLSAALL G TVVWFLF
Sbjct: 1   MPIYSDSDDDSAPPPSKLFGRRRPIREILGGGRVADMLLWKNTKLSAALLLGMTVVWFLF 60

Query: 61  EVVEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKI 120
           EVVEYNFVTLICHLSITSML+FFIWCTGAEIFKW+ P+LPEVILK SAF EVASTFH +I
Sbjct: 61  EVVEYNFVTLICHLSITSMLVFFIWCTGAEIFKWDPPRLPEVILKESAFKEVASTFHTRI 120

Query: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYE 180
           NQFL+K+FDIAYG+DLPLFFLAIV LYLLSVIGSY+SFLNLLYFGFVA+ETLPFLYEKYE
Sbjct: 121 NQFLAKLFDIAYGRDLPLFFLAIVCLYLLSVIGSYISFLNLLYFGFVAMETLPFLYEKYE 180

Query: 181 EEVDHFAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKKLR 221
           EEVDHFAGKAIYQTKKSYR+FD+KFLNKIPRGPVKDKK+R
Sbjct: 181 EEVDHFAGKAIYQTKKSYRNFDSKFLNKIPRGPVKDKKVR 220

[Close]

BLAST of Lcy06g002080 vs. NCBI nr
Match: XP_022954524.1 (reticulon-like protein B9 [Cucurbita moschata])

HSP 1 Score: 385.6 bits (989), Expect = 2.9e-103
Identity = 193/220 (87.73%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MPTYSSDSDDDLVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLF 60
           M TY +DSDDD   PSKLFGRRRP+H+ILGGGKVADILLW+DTK+S ALL G T +WFLF
Sbjct: 1   MSTY-TDSDDDSAAPSKLFGRRRPVHEILGGGKVADILLWRDTKMSGALLLGMTTLWFLF 60

Query: 61  EVVEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKI 120
           EVVEY FVTL+CHLSITSMLIFFIWCTGAEIFKWN P+LPEVILK SAF EVASTFHR+I
Sbjct: 61  EVVEYKFVTLVCHLSITSMLIFFIWCTGAEIFKWNPPRLPEVILKDSAFKEVASTFHRRI 120

Query: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYE 180
           NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNL+YFGFVALETLPFLY KYE
Sbjct: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLVYFGFVALETLPFLYVKYE 180

Query: 181 EEVDHFAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKKLR 221
           EEVDH AGKAIY TKKSYR+FDAKFLNKIPRGPVKDKKLR
Sbjct: 181 EEVDHLAGKAIYHTKKSYRNFDAKFLNKIPRGPVKDKKLR 219

[Close]

BLAST of Lcy06g002080 vs. NCBI nr
Match: XP_022994698.1 (reticulon-like protein B9 [Cucurbita maxima])

HSP 1 Score: 384.4 bits (986), Expect = 6.5e-103
Identity = 193/220 (87.73%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MPTYSSDSDDDLVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLF 60
           M TY +DSDDD   PSKLFGRRRP+H+ILGGGKVADILLW+D+K+S ALL G T +WFLF
Sbjct: 1   MSTY-TDSDDDSAAPSKLFGRRRPVHEILGGGKVADILLWRDSKMSGALLLGMTTLWFLF 60

Query: 61  EVVEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKI 120
           EVVEY FVTLICHLSITSMLIFFIWCTGAEIFKWN P+LPEVILK SAF EVASTFHR+I
Sbjct: 61  EVVEYKFVTLICHLSITSMLIFFIWCTGAEIFKWNPPRLPEVILKDSAFKEVASTFHRRI 120

Query: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYE 180
           NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNL+YFGFVALETLPFLY KYE
Sbjct: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLVYFGFVALETLPFLYVKYE 180

Query: 181 EEVDHFAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKKLR 221
           EEVDH AGKAIY TKKSYR+FDAKFLNKIPRGPVKDKKLR
Sbjct: 181 EEVDHLAGKAIYHTKKSYRNFDAKFLNKIPRGPVKDKKLR 219

[Close]

BLAST of Lcy06g002080 vs. NCBI nr
Match: XP_023541357.1 (reticulon-like protein B9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383.3 bits (983), Expect = 1.5e-102
Identity = 192/220 (87.27%), Postives = 204/220 (92.73%), Query Frame = 0


Query: 1   MPTYSSDSDDDLVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLF 60
           M TY +D+DDD   PSKLFGRRRP+H+ILGGGKVADILLW+D+K+S ALL G T +WFLF
Sbjct: 1   MSTY-TDTDDDSAAPSKLFGRRRPVHEILGGGKVADILLWRDSKMSGALLLGMTTLWFLF 60

Query: 61  EVVEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKI 120
           EVVEY FVTLICHLSITSMLIFFIWCTGAEIFKWN P+LPEVILK SAF EVASTFHR+I
Sbjct: 61  EVVEYKFVTLICHLSITSMLIFFIWCTGAEIFKWNPPRLPEVILKDSAFKEVASTFHRRI 120

Query: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYE 180
           NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNL+YFGFVALETLPFLY KYE
Sbjct: 121 NQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLVYFGFVALETLPFLYVKYE 180

Query: 181 EEVDHFAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKKLR 221
           EEVDH AGKAIY TKKSYR+FDAKFLNKIPRGPVKDKKLR
Sbjct: 181 EEVDHLAGKAIYHTKKSYRNFDAKFLNKIPRGPVKDKKLR 219

[Close]

BLAST of Lcy06g002080 vs. TAIR 10
Match: AT3G18260.1 (Reticulon family protein )

HSP 1 Score: 248.1 bits (632), Expect = 6.8e-66
Identity = 117/216 (54.17%), Postives = 164/216 (75.93%), Query Frame = 0


Query: 5   SSDSDDD--LVPPSKLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLFEV 64
           SSDS+D+  +   +KLF R+R IH I GGGKVADILLW++ K++A L+ G +++WFL EV
Sbjct: 8   SSDSEDERTIHKTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEV 67

Query: 65  VEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKINQ 124
           VEYNF+TLICH S+TSML FFIW T ++   W  P +PEV+L  S+F ++A +FH + NQ
Sbjct: 68  VEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQ 127

Query: 125 FLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEE 184
            L+K+ D+A G+D PLFFL  +SLY++S+IG+Y +F+NLL+ GFV+++TLP +YE YE++
Sbjct: 128 ILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDD 187

Query: 185 VDHFAGKAIYQTKKSYRDFDAKFLNKIPRGPVKDKK 219
           VD  AGK + + KK Y+  D   L+KIPRG VK+KK
Sbjct: 188 VDTAAGKLMRKMKKLYKKVDTNVLSKIPRGTVKNKK 223

[Close]

BLAST of Lcy06g002080 vs. TAIR 10
Match: AT4G11220.1 (VIRB2-interacting protein 2 )

HSP 1 Score: 187.2 bits (474), Expect = 1.4e-47
Identity = 90/202 (44.55%), Postives = 132/202 (65.35%), Query Frame = 0


Query: 17  KLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLFEVVEYNFVTLICHLSI 76
           +LFGR RP+H +LGGGK ADI +WKD K+S  +  GATV W LFE++EY+ +TL+CH+ I
Sbjct: 68  RLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMI 127

Query: 77  TSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKINQFLSKIFDIAYGKDL 136
            ++ + F+W         + P++PEV +      ++AS    +IN+ +S + +IA G+D+
Sbjct: 128 VALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDI 187

Query: 137 PLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDHFAGKAIYQTKK 196
             F  AI  L++LS++G   SFL L Y   V L T+P  Y+KYE++VD +  KA+ + KK
Sbjct: 188 KKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKK 247

Query: 197 SYRDFDAKFLNKIPRGPVKDKK 219
            Y   DAK  +KIPRGP+KDKK
Sbjct: 248 QYAVLDAKVFSKIPRGPLKDKK 269

[Close]

BLAST of Lcy06g002080 vs. TAIR 10
Match: AT2G46170.1 (Reticulon family protein )

HSP 1 Score: 180.3 bits (456), Expect = 1.7e-45
Identity = 88/201 (43.78%), Postives = 135/201 (67.16%), Query Frame = 0


Query: 17  KLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLFEVVEYNFVTLICHLSI 76
           ++FGR +P+H +LGGGK AD+ LW+D KLS A+L  AT +W LFE+VEY+ ++L+CH+SI
Sbjct: 51  RMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISI 110

Query: 77  TSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKINQFLSKIFDIAYGKDL 136
            ++   F+W     +    +PQ+PE+ +   AF  VAS+   ++NQ    +  IA G+DL
Sbjct: 111 LALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDL 170

Query: 137 PLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDHFAGKAIYQTKK 196
             F + +V L+++SV+G++ +FL L+Y  FV L T+P LYEK+E++VD  A KA+ + +K
Sbjct: 171 KKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQK 230

Query: 197 SYRDFDAKFLNKIPRGPVKDK 218
            Y  FD K L+KIP   +K K
Sbjct: 231 QYVVFDEKVLSKIPIASLKAK 251

[Close]

BLAST of Lcy06g002080 vs. TAIR 10
Match: AT4G23630.1 (VIRB2-interacting protein 1 )

HSP 1 Score: 175.6 bits (444), Expect = 4.3e-44
Identity = 85/202 (42.08%), Postives = 129/202 (63.86%), Query Frame = 0


Query: 17  KLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWFLFEVVEYNFVTLICHLSI 76
           +LFGR +P+H +LGGGK ADI +WK+ K+S  +L GAT  W +FE++EY+ +TL+CH+ I
Sbjct: 72  RLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMI 131

Query: 77  TSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHRKINQFLSKIFDIAYGKDL 136
             + + F+W         + P++PEV +      ++AS    +IN+  S + +IA G+DL
Sbjct: 132 VVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDL 191

Query: 137 PLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEKYEEEVDHFAGKAIYQTKK 196
             F +AI  L++LS++G   +FL L Y   V L T+P  Y+KYE++VD    KA+ + KK
Sbjct: 192 KKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKK 251

Query: 197 SYRDFDAKFLNKIPRGPVKDKK 219
            Y   D K L+KIP GP+K+KK
Sbjct: 252 QYAVLDEKVLSKIPLGPLKNKK 273

[Close]

BLAST of Lcy06g002080 vs. TAIR 10
Match: AT1G64090.1 (Reticulan like protein B3 )

HSP 1 Score: 170.2 bits (430), Expect = 1.8e-42
Identity = 94/218 (43.12%), Postives = 135/218 (61.93%), Query Frame = 0


Query: 5   SSDSDDDLVPPS------KLFGRRRPIHDILGGGKVADILLWKDTKLSAALLFGATVVWF 64
           SSDSDDD    S      +LFGR +P+H + GGGK ADI LW++ K+S  +L  ATV W 
Sbjct: 29  SSDSDDDKNSASLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWI 88

Query: 65  LFEVVEYNFVTLICHLSITSMLIFFIWCTGAEIFKWNAPQLPEVILKASAFNEVASTFHR 124
           LFE++EYN +TL  H+SI ++ + F+W + +     +   +PEV +      ++AS    
Sbjct: 89  LFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRI 148

Query: 125 KINQFLSKIFDIAYGKDLPLFFLAIVSLYLLSVIGSYVSFLNLLYFGFVALETLPFLYEK 184
           +IN+  + + DIA G+DL  F L I  L++LS +GS  +FL L+Y   V L T+P LYEK
Sbjct: 149 EINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEK 208

Query: 185 YEEEVDHFAGKAIYQTKKSYRDFDAKFL----NKIPRG 213
           YE++VD F  KA+ + KK Y +FD K L    +KIP+G
Sbjct: 209 YEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPKG 246

The following BLAST results are available for this feature:

BLAST of Lcy06g002080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJQ5	9.5e-65	54.17	Reticulon-like protein B9 OS=Arabidopsis thaliana OX=3702 GN=RTNLB9 PE=2 SV=1	[more]
Q9SUT9	2.0e-46	44.55	Reticulon-like protein B2 OS=Arabidopsis thaliana OX=3702 GN=RTNLB2 PE=1 SV=1	[more]
O82352	2.4e-44	43.78	Reticulon-like protein B5 OS=Arabidopsis thaliana OX=3702 GN=RTNLB5 PE=1 SV=1	[more]
Q9SUR3	6.0e-43	42.08	Reticulon-like protein B1 OS=Arabidopsis thaliana OX=3702 GN=RTNLB1 PE=1 SV=1	[more]
Q9SH59	2.5e-41	43.12	Reticulon-like protein B3 OS=Arabidopsis thaliana OX=3702 GN=RTNLB3 PE=2 SV=1	[more]

BLAST of Lcy06g002080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C7F6	1.1e-103	85.91	Reticulon-like protein OS=Momordica charantia OX=3673 GN=LOC111008946 PE=4 SV=1	[more]
A0A6J1GT81	1.4e-103	87.73	Reticulon-like protein OS=Cucurbita moschata OX=3662 GN=LOC111456766 PE=4 SV=1	[more]
A0A6J1K5V9	3.2e-103	87.73	Reticulon-like protein OS=Cucurbita maxima OX=3661 GN=LOC111490348 PE=4 SV=1	[more]
A0A1S3CEE6	5.0e-101	87.44	Reticulon-like protein OS=Cucumis melo OX=3656 GN=LOC103499764 PE=4 SV=1	[more]
A0A0A0LTQ2	5.6e-100	86.51	Reticulon-like protein OS=Cucumis sativus OX=3659 GN=Csa_1G042570 PE=4 SV=1	[more]

BLAST of Lcy06g002080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895119.1	1.3e-103	88.64	reticulon-like protein B9 [Benincasa hispida]	[more]
XP_022137519.1	2.2e-103	85.91	reticulon-like protein B9 [Momordica charantia]	[more]
XP_022954524.1	2.9e-103	87.73	reticulon-like protein B9 [Cucurbita moschata]	[more]
XP_022994698.1	6.5e-103	87.73	reticulon-like protein B9 [Cucurbita maxima]	[more]
XP_023541357.1	1.5e-102	87.27	reticulon-like protein B9 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy06g002080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18260.1	6.8e-66	54.17	Reticulon family protein	[more]
AT4G11220.1	1.4e-47	44.55	VIRB2-interacting protein 2	[more]
AT2G46170.1	1.7e-45	43.78	Reticulon family protein	[more]
AT4G23630.1	4.3e-44	42.08	VIRB2-interacting protein 1	[more]
AT1G64090.1	1.8e-42	43.12	Reticulan like protein B3	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 34..190 e-value: 4.2E-49 score: 166.5
IPR003388	Reticulon	PROSITE	PS50845	RETICULON	coord: 34..220 score: 34.825821
None	No IPR available	PANTHER	PTHR10994:SF85	RETICULON-LIKE PROTEIN B9	coord: 5..218
IPR045064	Reticulon-like protein, plant	PANTHER	PTHR10994	RETICULON	coord: 5..218

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy06g002080.1	Lcy06g002080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009617	response to bacterium
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane