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Lcy06g001820 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACTTCAACCTGCTTTCTGCAATTCCTTCAATCCCTTCTCTCTGATGGCGGTTTAATTAAAACCCTAATTCTTCTATCTTTCTTTCTTCTTCCATGGAAAATTGCTCCGAGAACAACAAGCGACTTCGCCACGAGTTCGACGACTCGCTTGCCGATTCGGCCGAGTCCAAGCTCAGACGACTCAACTCAGCCGAATCGAGATTTCTGAAGCCATGCACCAAGGCAAACTGGAATGTTGTTAACTCGTCGAAGTTGCAGCAGGGAGGTTCCGATGGAGATGATTTGAGGATCGATTTGGCGGAGTCGGAGGAGATTCAGGATGAGTTGCTTAACATCCTTGAAGATTCCGACGCTGCAACGGAGCGCGATGAGAGTATTCAAGGCCTCGAACTCGATTCTTTCATCAAAAGCTTCGAGGAGGAGATTCAAGCGCTTCCGCCGGCGGAAACGGCGTCGGATCAGAATGAGACTCCTCAGGCGGAACTCGGATATCTTTACGAGGCGTCGGATGATGAACTAGGCCTGCCGCCGACGGGCGGCTCGAGTACTGAAGGAAAGATCGAGGCGATCGATTTTATGCCGGCTTGTTCCTCGCCTGATGCGTTCGAGTTGGACGGGAACTTAGGGTTTGAAGATGAGATACCGTGTTACGACTCGTTCGAGATCGGGATCGGCATTGATTCCGGCGCGGCGGAGGAGAGTGGTTTGGGCGGGGAGTTTGTTGCATTGGGCGGTTTGTTTGATTATTCGGACGTGCCGTTTCGGCCGGAGTCGTTGTCGGCTTTGTAGAGACGGTTTTGGTTTTTTTGGAGTTGGGTTCGACGTGTTGGTGTGGACCCGACGTCGTTTCGAGTCTGTAGGTTGTAAATCTGAAAGGACAAAAACACAATTAGAATAGAAATGCAGAAATTAAAAAAAAAAATGTAGAAAAGGTTTTGTTTTGCTTTTTCTAAAAAAAAAACGATTATTAATTTTTACCGTTGTAAAAACCCTGTGTATCTGTCGGTTTTGGTTTTTTCCCTCTTTTGTCCTCACTTTTATTGCGTTACTTATCGATTGGGGAGGGGTAGTTTTGGGAAATTAATTAAAAGATAAAAAGGTTGAACCAGTTTCGAGTTGA CACTTCAACCTGCTTTCTGCAATTCCTTCAATCCCTTCTCTCTGATGGCGGTTTAATTAAAACCCTAATTCTTCTATCTTTCTTTCTTCTTCCATGGAAAATTGCTCCGAGAACAACAAGCGACTTCGCCACGAGTTCGACGACTCGCTTGCCGATTCGGCCGAGTCCAAGCTCAGACGACTCAACTCAGCCGAATCGAGATTTCTGAAGCCATGCACCAAGGCAAACTGGAATGTTGTTAACTCGTCGAAGTTGCAGCAGGGAGGTTCCGATGGAGATGATTTGAGGATCGATTTGGCGGAGTCGGAGGAGATTCAGGATGAGTTGCTTAACATCCTTGAAGATTCCGACGCTGCAACGGAGCGCGATGAGAGTATTCAAGGCCTCGAACTCGATTCTTTCATCAAAAGCTTCGAGGAGGAGATTCAAGCGCTTCCGCCGGCGGAAACGGCGTCGGATCAGAATGAGACTCCTCAGGCGGAACTCGGATATCTTTACGAGGCGTCGGATGATGAACTAGGCCTGCCGCCGACGGGCGGCTCGAGTACTGAAGGAAAGATCGAGGCGATCGATTTTATGCCGGCTTGTTCCTCGCCTGATGCGTTCGAGTTGGACGGGAACTTAGGGTTTGAAGATGAGATACCGTGTTACGACTCGTTCGAGATCGGGATCGGCATTGATTCCGGCGCGGCGGAGGAGAGTGGTTTGGGCGGGGAGTTTGTTGCATTGGGCGGTTTGTTTGATTATTCGGACGTGCCGTTTCGGCCGGAGTCGTTGTCGGCTTTGTAGAGACGGTTTTGGTTTTTTTGGAGTTGGGTTCGACGTGTTGGTGTGGACCCGACGTCGTTTCGAGTCTGTAGGTTGTAAATCTGAAAGGACAAAAACACAATTAGAATAGAAATGCAGAAATTAAAAAAAAAAATGTAGAAAAGGTTTTGTTTTGCTTTTTCTAAAAAAAAAACGATTATTAATTTTTACCGTTGTAAAAACCCTGTGTATCTGTCGGTTTTGGTTTTTTCCCTCTTTTGTCCTCACTTTTATTGCGTTACTTATCGATTGGGGAGGGGTAGTTTTGGGAAATTAATTAAAAGATAAAAAGGTTGAACCAGTTTCGAGTTGA ATGGAAAATTGCTCCGAGAACAACAAGCGACTTCGCCACGAGTTCGACGACTCGCTTGCCGATTCGGCCGAGTCCAAGCTCAGACGACTCAACTCAGCCGAATCGAGATTTCTGAAGCCATGCACCAAGGCAAACTGGAATGTTGTTAACTCGTCGAAGTTGCAGCAGGGAGGTTCCGATGGAGATGATTTGAGGATCGATTTGGCGGAGTCGGAGGAGATTCAGGATGAGTTGCTTAACATCCTTGAAGATTCCGACGCTGCAACGGAGCGCGATGAGAGTATTCAAGGCCTCGAACTCGATTCTTTCATCAAAAGCTTCGAGGAGGAGATTCAAGCGCTTCCGCCGGCGGAAACGGCGTCGGATCAGAATGAGACTCCTCAGGCGGAACTCGGATATCTTTACGAGGCGTCGGATGATGAACTAGGCCTGCCGCCGACGGGCGGCTCGAGTACTGAAGGAAAGATCGAGGCGATCGATTTTATGCCGGCTTGTTCCTCGCCTGATGCGTTCGAGTTGGACGGGAACTTAGGGTTTGAAGATGAGATACCGTGTTACGACTCGTTCGAGATCGGGATCGGCATTGATTCCGGCGCGGCGGAGGAGAGTGGTTTGGGCGGGGAGTTTGTTGCATTGGGCGGTTTGTTTGATTATTCGGACGTGCCGTTTCGGCCGGAGTCGTTGTCGGCTTTGTAG MENCSENNKRLRHEFDDSLADSAESKLRRLNSAESRFLKPCTKANWNVVNSSKLQQGGSDGDDLRIDLAESEEIQDELLNILEDSDAATERDESIQGLELDSFIKSFEEEIQALPPAETASDQNETPQAELGYLYEASDDELGLPPTGGSSTEGKIEAIDFMPACSSPDAFELDGNLGFEDEIPCYDSFEIGIGIDSGAAEESGLGGEFVALGGLFDYSDVPFRPESLSAL Homology
BLAST of Lcy06g001820 vs. ExPASy TrEMBL
Match: A0A6J1GR95 (uncharacterized protein LOC111456805 OS=Cucurbita moschata OX=3662 GN=LOC111456805 PE=4 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 6.3e-94 Identity = 186/231 (80.52%), Postives = 200/231 (86.58%), Query Frame = 0
BLAST of Lcy06g001820 vs. ExPASy TrEMBL
Match: A0A6J1K097 (uncharacterized protein LOC111489916 OS=Cucurbita maxima OX=3661 GN=LOC111489916 PE=4 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 5.9e-92 Identity = 182/231 (78.79%), Postives = 197/231 (85.28%), Query Frame = 0
BLAST of Lcy06g001820 vs. ExPASy TrEMBL
Match: A0A6J1E811 (uncharacterized protein LOC111431577 OS=Cucurbita moschata OX=3662 GN=LOC111431577 PE=4 SV=1) HSP 1 Score: 322.0 bits (824), Expect = 2.0e-84 Identity = 174/233 (74.68%), Postives = 190/233 (81.55%), Query Frame = 0
BLAST of Lcy06g001820 vs. ExPASy TrEMBL
Match: A0A0A0LQD5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042270 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 7.4e-71 Identity = 169/244 (69.26%), Postives = 193/244 (79.10%), Query Frame = 0
BLAST of Lcy06g001820 vs. ExPASy TrEMBL
Match: A0A5E4F0J5 (PREDICTED: AT1G13360 OS=Prunus dulcis OX=3755 GN=ALMOND_2B007874 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 4.0e-40 Identity = 124/245 (50.61%), Postives = 148/245 (60.41%), Query Frame = 0
BLAST of Lcy06g001820 vs. NCBI nr
Match: XP_022954576.1 (uncharacterized protein LOC111456805 [Cucurbita moschata]) HSP 1 Score: 353.6 bits (906), Expect = 1.3e-93 Identity = 186/231 (80.52%), Postives = 200/231 (86.58%), Query Frame = 0
BLAST of Lcy06g001820 vs. NCBI nr
Match: XP_023541956.1 (uncharacterized protein LOC111801944 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 351.7 bits (901), Expect = 4.9e-93 Identity = 185/231 (80.09%), Postives = 198/231 (85.71%), Query Frame = 0
BLAST of Lcy06g001820 vs. NCBI nr
Match: KAG6572935.1 (hypothetical protein SDJN03_26822, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 349.0 bits (894), Expect = 3.2e-92 Identity = 184/231 (79.65%), Postives = 198/231 (85.71%), Query Frame = 0
BLAST of Lcy06g001820 vs. NCBI nr
Match: XP_022994085.1 (uncharacterized protein LOC111489916 [Cucurbita maxima]) HSP 1 Score: 347.1 bits (889), Expect = 1.2e-91 Identity = 182/231 (78.79%), Postives = 197/231 (85.28%), Query Frame = 0
BLAST of Lcy06g001820 vs. NCBI nr
Match: KAG6584364.1 (hypothetical protein SDJN03_20296, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 323.9 bits (829), Expect = 1.1e-84 Identity = 175/233 (75.11%), Postives = 191/233 (81.97%), Query Frame = 0
BLAST of Lcy06g001820 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 82.0 bits (201), Expect = 6.8e-16 Identity = 67/185 (36.22%), Postives = 96/185 (51.89%), Query Frame = 0
BLAST of Lcy06g001820 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 75.1 bits (183), Expect = 8.3e-14 Identity = 59/166 (35.54%), Postives = 87/166 (52.41%), Query Frame = 0
BLAST of Lcy06g001820 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). ) HSP 1 Score: 72.4 bits (176), Expect = 5.4e-13 Identity = 58/162 (35.80%), Postives = 85/162 (52.47%), Query Frame = 0
BLAST of Lcy06g001820 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.5 bits (114), Expect = 8.3e-06 Identity = 57/178 (32.02%), Postives = 82/178 (46.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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