Lcy05g012930 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g012930
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionCCHC-type domain-containing protein
LocationChr05: 15153595 .. 15155238 (+)
RNA-Seq ExpressionLcy05g012930
SyntenyLcy05g012930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATATTGTTGAGAAACTAAATTCACTCAGGCTCTCCCAAAAGGAGTCTTGTGGGATTAGTAAAGAAGAACTAGGCATACTGGGGAATAACTTGAATCTGGAAAATCGTTTGGCTTGTAAAGTTGCTACGAACCGGATTATCAACACAGATGCGTTCCGAAGAGTAATGTGCAAGGCCTGGAATTTTTGTCGAGACTTAACTATTGATAACGTTGGTGATAATATCTTCCTTGTTAACCCGCAATCAGCTCAAGGGCGCGACAGAATTATCGAGGAAAGTCTTTGGTGTTTTAATAGATGTTTGATCCTCCTTGCAACACCATCAACATTTGACCAGCCGGAAGAAATTGTGTTCGATACGGCAATATACTGGGTTCAATTCCACAACGTTCCAATCGGACTGAGAAACGAAAAGGTGGCTCGAATTTTAGGTGGTCGGATAGGCGAGGTCCTTAAAATCGACACCAACGAAGTTGATGAATGTTGCGGTCGTTTCCTCCGTGTGAGAGTGAAACTGCAATTCAACGAACCACTTTGTCGTGGCTTAACACTAAACGGCGGCCCAACAGGTAAAGTTTTAGTTGGAATAAAGTATGAACGATTACCCGACTTCTGCTATATTTGTGGAATGCTAGGGCACAATGATGGATCTTGTCCGGAGAACAAAAAATCGGAGAAACAGTTCGGATCTTGGCTTCGAGCAGAAACTTACCACATGCCCAGAAGCCCATTCACCGGCGGCCGATCTTATGACTCAGGACGGAGAGGACGCGGACGATTCAGGTATCGTTCAATGGGCAGGCAGAATTGGGGATCTGATGATTCTGAGGAGGAAGAAAACGAAGCAACACTACTGGAAAGAACAGGCCAATCGGATGTCAGAAATAAGCTCGCCGAAGAAGACCAGAACCGACCGGAAAAAGAAGAAACTCAGAGATCACCGGAATCCCATCGACGGAAAAGGAATGAAACTGACCTTCAGCCACAATCAATGTCACCGACGCAATCTATGGAAACCGAATCACCCAAAAACGGTAAAAATTCATTTATTGCAGGCTTATTCCCAAAAACGGCTGAGCAAGATGCTGAAGGGGAGAAATCGATCCTCAAGGAAGCTCCTTTAATGGCTGAAGATTTATTCCCAAATATGGAGGAGAGAGAAGAGAACCCAATCATGAAGAATCTAATGGATCAAATTGAAGAGAGGGCTCAACAACATGAATTTGGGCCTGGCATCCTTATGGGCCAAGTGGATTCTGACTTCCAGGAGAATGAAGGAGACAAAGCCCACACAAAAAATACTAATCACATTGGGCCCTCCAACGAGTTTCACAACATGGAGGTGGATCCCAACTCTTGTCACTCACAGAATGGGGGCCAACGTCAGACTGAAGAAAGGGAAGCGAGCAAAGTCGTGGTGAGGAAAAATGCAAAGTCGTGGAAGCGAGCAAACAGAAAGGGAAGTCAATGGGTAACTAAAAATTCCAATTCACAAACTCTTACGAGCTCTATTGGAAAGAAAAGAGACTCAGATGAACTCCCTTTGAAAGATAGTGAAGGAAAGAAGATCAAATGTATCACATCAGAGATCGATACGATTATATCGGCGGAGCCTGTTAAACAGGCCCGCCGAGAGCCATGA

mRNA sequence

ATGGATATTGTTGAGAAACTAAATTCACTCAGGCTCTCCCAAAAGGAGTCTTGTGGGATTAGTAAAGAAGAACTAGGCATACTGGGGAATAACTTGAATCTGGAAAATCGTTTGGCTTGTAAAGTTGCTACGAACCGGATTATCAACACAGATGCGTTCCGAAGAGTAATGTGCAAGGCCTGGAATTTTTGTCGAGACTTAACTATTGATAACGTTGGTGATAATATCTTCCTTGTTAACCCGCAATCAGCTCAAGGGCGCGACAGAATTATCGAGGAAAGTCTTTGGTGTTTTAATAGATGTTTGATCCTCCTTGCAACACCATCAACATTTGACCAGCCGGAAGAAATTGTGTTCGATACGGCAATATACTGGGTTCAATTCCACAACGTTCCAATCGGACTGAGAAACGAAAAGGTGGCTCGAATTTTAGGTGGTCGGATAGGCGAGGTCCTTAAAATCGACACCAACGAAGTTGATGAATGTTGCGGTCGTTTCCTCCGTGTGAGAGTGAAACTGCAATTCAACGAACCACTTTGTCGTGGCTTAACACTAAACGGCGGCCCAACAGGTAAAGTTTTAGTTGGAATAAAGTATGAACGATTACCCGACTTCTGCTATATTTGTGGAATGCTAGGGCACAATGATGGATCTTGTCCGGAGAACAAAAAATCGGAGAAACAGTTCGGATCTTGGCTTCGAGCAGAAACTTACCACATGCCCAGAAGCCCATTCACCGGCGGCCGATCTTATGACTCAGGACGGAGAGGACGCGGACGATTCAGGTATCGTTCAATGGGCAGGCAGAATTGGGGATCTGATGATTCTGAGGAGGAAGAAAACGAAGCAACACTACTGGAAAGAACAGGCCAATCGGATGTCAGAAATAAGCTCGCCGAAGAAGACCAGAACCGACCGGAAAAAGAAGAAACTCAGAGATCACCGGAATCCCATCGACGGAAAAGGAATGAAACTGACCTTCAGCCACAATCAATGTCACCGACGCAATCTATGGAAACCGAATCACCCAAAAACGGTAAAAATTCATTTATTGCAGGCTTATTCCCAAAAACGGCTGAGCAAGATGCTGAAGGGGAGAAATCGATCCTCAAGGAAGCTCCTTTAATGGCTGAAGATTTATTCCCAAATATGGAGGAGAGAGAAGAGAACCCAATCATGAAGAATCTAATGGATCAAATTGAAGAGAGGGCTCAACAACATGAATTTGGGCCTGGCATCCTTATGGGCCAAGTGGATTCTGACTTCCAGGAGAATGAAGGAGACAAAGCCCACACAAAAAATACTAATCACATTGGGCCCTCCAACGAGTTTCACAACATGGAGGTGGATCCCAACTCTTGTCACTCACAGAATGGGGGCCAACGTCAGACTGAAGAAAGGGAAGCGAGCAAAGTCGTGGTGAGGAAAAATGCAAAGTCGTGGAAGCGAGCAAACAGAAAGGGAAGTCAATGGGTAACTAAAAATTCCAATTCACAAACTCTTACGAGCTCTATTGGAAAGAAAAGAGACTCAGATGAACTCCCTTTGAAAGATAGTGAAGGAAAGAAGATCAAATGTATCACATCAGAGATCGATACGATTATATCGGCGGAGCCTGTTAAACAGGCCCGCCGAGAGCCATGA

Coding sequence (CDS)

ATGGATATTGTTGAGAAACTAAATTCACTCAGGCTCTCCCAAAAGGAGTCTTGTGGGATTAGTAAAGAAGAACTAGGCATACTGGGGAATAACTTGAATCTGGAAAATCGTTTGGCTTGTAAAGTTGCTACGAACCGGATTATCAACACAGATGCGTTCCGAAGAGTAATGTGCAAGGCCTGGAATTTTTGTCGAGACTTAACTATTGATAACGTTGGTGATAATATCTTCCTTGTTAACCCGCAATCAGCTCAAGGGCGCGACAGAATTATCGAGGAAAGTCTTTGGTGTTTTAATAGATGTTTGATCCTCCTTGCAACACCATCAACATTTGACCAGCCGGAAGAAATTGTGTTCGATACGGCAATATACTGGGTTCAATTCCACAACGTTCCAATCGGACTGAGAAACGAAAAGGTGGCTCGAATTTTAGGTGGTCGGATAGGCGAGGTCCTTAAAATCGACACCAACGAAGTTGATGAATGTTGCGGTCGTTTCCTCCGTGTGAGAGTGAAACTGCAATTCAACGAACCACTTTGTCGTGGCTTAACACTAAACGGCGGCCCAACAGGTAAAGTTTTAGTTGGAATAAAGTATGAACGATTACCCGACTTCTGCTATATTTGTGGAATGCTAGGGCACAATGATGGATCTTGTCCGGAGAACAAAAAATCGGAGAAACAGTTCGGATCTTGGCTTCGAGCAGAAACTTACCACATGCCCAGAAGCCCATTCACCGGCGGCCGATCTTATGACTCAGGACGGAGAGGACGCGGACGATTCAGGTATCGTTCAATGGGCAGGCAGAATTGGGGATCTGATGATTCTGAGGAGGAAGAAAACGAAGCAACACTACTGGAAAGAACAGGCCAATCGGATGTCAGAAATAAGCTCGCCGAAGAAGACCAGAACCGACCGGAAAAAGAAGAAACTCAGAGATCACCGGAATCCCATCGACGGAAAAGGAATGAAACTGACCTTCAGCCACAATCAATGTCACCGACGCAATCTATGGAAACCGAATCACCCAAAAACGGTAAAAATTCATTTATTGCAGGCTTATTCCCAAAAACGGCTGAGCAAGATGCTGAAGGGGAGAAATCGATCCTCAAGGAAGCTCCTTTAATGGCTGAAGATTTATTCCCAAATATGGAGGAGAGAGAAGAGAACCCAATCATGAAGAATCTAATGGATCAAATTGAAGAGAGGGCTCAACAACATGAATTTGGGCCTGGCATCCTTATGGGCCAAGTGGATTCTGACTTCCAGGAGAATGAAGGAGACAAAGCCCACACAAAAAATACTAATCACATTGGGCCCTCCAACGAGTTTCACAACATGGAGGTGGATCCCAACTCTTGTCACTCACAGAATGGGGGCCAACGTCAGACTGAAGAAAGGGAAGCGAGCAAAGTCGTGGTGAGGAAAAATGCAAAGTCGTGGAAGCGAGCAAACAGAAAGGGAAGTCAATGGGTAACTAAAAATTCCAATTCACAAACTCTTACGAGCTCTATTGGAAAGAAAAGAGACTCAGATGAACTCCCTTTGAAAGATAGTGAAGGAAAGAAGATCAAATGTATCACATCAGAGATCGATACGATTATATCGGCGGAGCCTGTTAAACAGGCCCGCCGAGAGCCATGA

Protein sequence

MDIVEKLNSLRLSQKESCGISKEELGILGNNLNLENRLACKVATNRIINTDAFRRVMCKAWNFCRDLTIDNVGDNIFLVNPQSAQGRDRIIEESLWCFNRCLILLATPSTFDQPEEIVFDTAIYWVQFHNVPIGLRNEKVARILGGRIGEVLKIDTNEVDECCGRFLRVRVKLQFNEPLCRGLTLNGGPTGKVLVGIKYERLPDFCYICGMLGHNDGSCPENKKSEKQFGSWLRAETYHMPRSPFTGGRSYDSGRRGRGRFRYRSMGRQNWGSDDSEEEENEATLLERTGQSDVRNKLAEEDQNRPEKEETQRSPESHRRKRNETDLQPQSMSPTQSMETESPKNGKNSFIAGLFPKTAEQDAEGEKSILKEAPLMAEDLFPNMEEREENPIMKNLMDQIEERAQQHEFGPGILMGQVDSDFQENEGDKAHTKNTNHIGPSNEFHNMEVDPNSCHSQNGGQRQTEEREASKVVVRKNAKSWKRANRKGSQWVTKNSNSQTLTSSIGKKRDSDELPLKDSEGKKIKCITSEIDTIISAEPVKQARREP
Homology
BLAST of Lcy05g012930 vs. ExPASy TrEMBL
Match: A0A1R3K847 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 6.8e-38
Identity = 74/210 (35.24%), Postives = 118/210 (56.19%), Query Frame = 0

Query: 41  KVATNRIINTDAFRRVMCKAWNFCRDLTIDNVGDNIFLVNPQSAQGRDRIIEESLWCFNR 100
           K+ + R +N D  R V+   W     L +  +G+ +++   +S   ++R+ ++  W FN+
Sbjct: 43  KLLSRRAVNIDVMRNVLHMVWKLSGGLQVREIGEKLYIFQFESEVEKERVYQQGPWNFNK 102

Query: 101 CLILLATPSTFDQPEEIVFDTAIYWVQFHNVPIGLRNEKVARILGGRIGEVLKIDTNEVD 160
            L++L     F   EEI  +   +W+Q H++P+G   E V + +G   GEV++IDT    
Sbjct: 103 ALLVLKNYDAFISVEEIKLEWCAFWIQVHDLPLGFMTESVGKAIGDSFGEVIEIDTCGDK 162

Query: 161 ECCGRFLRVRVKLQFNEPLCRGLTLNGGPTGKVLVGIKYERLPDFCYICGMLGHNDGSCP 220
              G+FLR+R  L  N+PL RG+ L     GK+LV  +YE+LPDFCY+CG L H +  C 
Sbjct: 163 VAWGKFLRIRACLNVNKPLRRGMILTAPNGGKILVSFRYEKLPDFCYVCGCLNHTENECE 222

Query: 221 -------ENKKSEKQFGSWLRAETYHMPRS 244
                  ++ K +K++G WLRAE   +PRS
Sbjct: 223 KAVIMRRDSGKVKKEYGPWLRAE---VPRS 249

BLAST of Lcy05g012930 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.3e-36
Identity = 84/271 (31.00%), Postives = 141/271 (52.03%), Query Frame = 0

Query: 33  NLENRLACKVATNRIINTDAFRRVMCKAWNFCRDLTIDNVGDNIFLVNPQSAQGRDRIIE 92
           N++  +  K+ T++ I+ +A R VM   W        + +G NI+++  +S   + R++ 
Sbjct: 34  NVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLS 93

Query: 93  ESLWCFNRCLILLATPSTFDQPEEIVFDTAIYWVQFHNVPIGLRNEKVARILGGRIGEVL 152
              W FN+ L++L +P+  +QP ++ F+   +W+Q HN+P    + ++A ILG ++G+V 
Sbjct: 94  SGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVE 153

Query: 153 KIDTNEVDECCGRFLRVRVKLQFNEPLCRGLTLNGGPTGKVLVGIKYERLPDFCYICGML 212
           +I+ +  D   G F+RVRVK+  ++PL RG+ L       +   ++YE+LPDFCY CG +
Sbjct: 154 EIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKI 213

Query: 213 GHNDGSCPENKK-----SEKQFGSWLRA-----------ETYHMPRSPFTGGRSYDSGRR 272
           GH+   C +  K     S +Q+G WLRA           E        F  G   + GR 
Sbjct: 214 GHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQVNGGRG 273

Query: 273 GRGRFRYRSMGRQNWGSDDSEEEENEATLLE 288
           GRG +R R    +NW   D  E  +   + E
Sbjct: 274 GRGDWRRRD---ENWRDIDGPESSHRRAVEE 301

BLAST of Lcy05g012930 vs. ExPASy TrEMBL
Match: A0A6J5TXP7 (CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS13519 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.1e-35
Identity = 86/263 (32.70%), Postives = 137/263 (52.09%), Query Frame = 0

Query: 10  LRLSQKESCGISKEELGILGNNLNLENRLACKVATNRIINTDAFRRVMCKAWNFCRDLTI 69
           L L+ KE  G+  E       N  L   L   V T++  N +AF++ M +AW   R++ +
Sbjct: 18  LSLTNKEQDGLHIESDDTTTMNERLHLCLVGTVLTDQGFNGEAFKQTMLRAWGTMREVGV 77

Query: 70  DNVGDNIFLVNPQSAQGRDRIIEESLWCFNRCLILLATPSTFDQPEEIVFDTAIYWVQFH 129
            ++ DN+FL    + + ++ +I    W F++ L+LL TP     P  +V   A +WVQ H
Sbjct: 78  KDLRDNLFLFTFTTMRDKEMVIRRGPWNFDKQLVLLETPYGNRAPNRMVLQNADFWVQAH 137

Query: 130 NVPIGLRNEKVARILGGRIGEVLKIDTNEVDECCGRFLRVRVKLQFNEPLCRGLTLNGGP 189
           N+P+        R +G R+G+ + +      EC G++L +RV+L   +PL R + L    
Sbjct: 138 NLPLNRMTVTTGRQIGNRLGQCIDVMEGAYGECLGKYLHIRVRLDVTKPLRRVMKLQFDH 197

Query: 190 TGKVLVGIKYERLPDFCYICGMLGHNDGSCP-----ENKKSEKQFGSWLRAETYHMPRSP 249
           + K ++  KYERLPDFCY CG +GH    C      E +  EK +GSWL ++ + + R  
Sbjct: 198 SLKAVIEFKYERLPDFCYACGRIGHVVKECKFVGAMEKEAKEKPYGSWLHSK-FEVGR-- 257

Query: 250 FTGGRSYDSGRRGRGRFRYRSMG 268
              GR+ + G++  GR   RS G
Sbjct: 258 ---GRTINPGKQEEGRNSQRSFG 274

BLAST of Lcy05g012930 vs. ExPASy TrEMBL
Match: A0A5C7HBM7 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019557 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-35
Identity = 90/279 (32.26%), Postives = 156/279 (55.91%), Query Frame = 0

Query: 23  EELGILGNNLNLENRLACKVATNRIINTDAFRRVMCKAWNFCRDLTIDNVGDNIFLVNPQ 82
           EE+G +G   ++ + L  K+ + R +N +AFR V+   W+   ++ I+ V +N+FL    
Sbjct: 27  EEVGRVGEE-DVNHCLVGKILSGRRVNREAFRMVIESLWSPFGNVDIEMVSENVFLFFFN 86

Query: 83  SAQGRDRIIEESLWCFNRCLILLATPSTFDQPEEIVFDTAIYWVQFHNVPIGLRNEKVAR 142
             + R+++ +   W F++CL++L  P    +  ++ F+ A +W+Q H++PI   N + A+
Sbjct: 87  KPEDRNKVWDRGPWHFDKCLLVLEKPEGTGEISKLKFNKADFWIQIHDIPIMCMNRRTAK 146

Query: 143 ILGGRIGEVLKIDTNEVDECCGRFLRVRVKLQFNEPLCRGLTLNGGPTGK-VLVGIKYER 202
            L  +IGEV++I T+  D C G+FLRV+V++  ++PL R L L    +G  V+VG+KYER
Sbjct: 147 WLAEQIGEVIEIPTDSRD-CWGKFLRVKVRIDISKPLKRWLRLGLDRSGNIVVVGLKYER 206

Query: 203 LPDFCYICGMLGHNDGSCPENKKSEK-------QFGSWLRA---ETYHMPRSPFTG---- 262
           LP+FCY CG LGH    CP+ +  ++       +FG W+RA       +   P TG    
Sbjct: 207 LPEFCYACGWLGHGISECPDTEAKKEAMEGATLRFGPWMRAPIQRNRKISHHPSTGIPKE 266

Query: 263 ---GRSYDSGRRGRGR----FRYRSMGRQNWGSDDSEEE 280
              G ++ + R G+ R    FR+++      G D + ++
Sbjct: 267 AASGETFYNLRGGKARRIDVFRWQNQNSTERGVDHNIQQ 303

BLAST of Lcy05g012930 vs. ExPASy TrEMBL
Match: A0A7N2KYZ3 (CCHC-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.0e-34
Identity = 81/220 (36.82%), Postives = 118/220 (53.64%), Query Frame = 0

Query: 36  NRLACKVATNRIINTDAFRRVMCKAWNFCRDLTIDNVGDNIFLVNPQSAQGRDRIIEESL 95
           +RLA +  T R +N D+  R     W    +L I ++GDNI L   +    R+R++E   
Sbjct: 32  HRLAGRFFTKRTVNVDSVARTFKPLWKPVGELKIRDIGDNILLFEFEDNLDRERVLEYEP 91

Query: 96  WCFNRCLILLATPSTFDQPEEIVFDTAIYWVQFHNVPIGLRNEKVARILGGRIGEVLKID 155
           W F++ +++    ST ++   + F  AI+WVQFHN+P    N+     +G  IG+V+++ 
Sbjct: 92  WTFDKHIVIFERVSTVEEISSLEFLRAIFWVQFHNIPEKSLNQATGEAVGNTIGKVIEVA 151

Query: 156 TNEVDECCGRFLRVRVKLQFNEPL--CRGLTLNGGPTGKVLVGIKYERLPDFCYICGMLG 215
             E D   G FLRVR+ +  ++PL  CR L   G   G   VG+KYERLP+FCY CG L 
Sbjct: 152 DPEDDGNGGEFLRVRISIDISKPLPRCRKLWYEGKQIG--WVGLKYERLPNFCYWCGRLS 211

Query: 216 HNDGSC------PEN-KKSEKQFGSWLRAETYHMPRSPFT 247
           H +  C       EN KK  +QFG W+RA+     R   T
Sbjct: 212 HVERDCELWIRGKENLKKENQQFGEWMRADMIRPTRKTVT 249

BLAST of Lcy05g012930 vs. NCBI nr
Match: OMP03234.1 (hypothetical protein COLO4_10561 [Corchorus olitorius])

HSP 1 Score: 168.7 bits (426), Expect = 1.4e-37
Identity = 74/210 (35.24%), Postives = 118/210 (56.19%), Query Frame = 0

Query: 41  KVATNRIINTDAFRRVMCKAWNFCRDLTIDNVGDNIFLVNPQSAQGRDRIIEESLWCFNR 100
           K+ + R +N D  R V+   W     L +  +G+ +++   +S   ++R+ ++  W FN+
Sbjct: 43  KLLSRRAVNIDVMRNVLHMVWKLSGGLQVREIGEKLYIFQFESEVEKERVYQQGPWNFNK 102

Query: 101 CLILLATPSTFDQPEEIVFDTAIYWVQFHNVPIGLRNEKVARILGGRIGEVLKIDTNEVD 160
            L++L     F   EEI  +   +W+Q H++P+G   E V + +G   GEV++IDT    
Sbjct: 103 ALLVLKNYDAFISVEEIKLEWCAFWIQVHDLPLGFMTESVGKAIGDSFGEVIEIDTCGDK 162

Query: 161 ECCGRFLRVRVKLQFNEPLCRGLTLNGGPTGKVLVGIKYERLPDFCYICGMLGHNDGSCP 220
              G+FLR+R  L  N+PL RG+ L     GK+LV  +YE+LPDFCY+CG L H +  C 
Sbjct: 163 VAWGKFLRIRACLNVNKPLRRGMILTAPNGGKILVSFRYEKLPDFCYVCGCLNHTENECE 222

Query: 221 -------ENKKSEKQFGSWLRAETYHMPRS 244
                  ++ K +K++G WLRAE   +PRS
Sbjct: 223 KAVIMRRDSGKVKKEYGPWLRAE---VPRS 249

BLAST of Lcy05g012930 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])

HSP 1 Score: 164.5 bits (415), Expect = 2.6e-36
Identity = 84/271 (31.00%), Postives = 141/271 (52.03%), Query Frame = 0

Query: 33  NLENRLACKVATNRIINTDAFRRVMCKAWNFCRDLTIDNVGDNIFLVNPQSAQGRDRIIE 92
           N++  +  K+ T++ I+ +A R VM   W        + +G NI+++  +S   + R++ 
Sbjct: 34  NVKLCVVAKLHTSKRISAEAIRSVMKSVWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLS 93

Query: 93  ESLWCFNRCLILLATPSTFDQPEEIVFDTAIYWVQFHNVPIGLRNEKVARILGGRIGEVL 152
              W FN+ L++L +P+  +QP ++ F+   +W+Q HN+P    + ++A ILG ++G+V 
Sbjct: 94  SGPWTFNKSLLVLTSPTATNQPLDMNFNFCAFWIQIHNIPFECISTEMANILGAKLGDVE 153

Query: 153 KIDTNEVDECCGRFLRVRVKLQFNEPLCRGLTLNGGPTGKVLVGIKYERLPDFCYICGML 212
           +I+ +  D   G F+RVRVK+  ++PL RG+ L       +   ++YE+LPDFCY CG +
Sbjct: 154 EIEGDGADGWAGPFIRVRVKIDVSKPLRRGIKLKNSDGKDIWCPLRYEKLPDFCYECGKI 213

Query: 213 GHNDGSCPENKK-----SEKQFGSWLRA-----------ETYHMPRSPFTGGRSYDSGRR 272
           GH+   C +  K     S +Q+G WLRA           E        F  G   + GR 
Sbjct: 214 GHSGRECEQRSKVVTTNSPEQYGDWLRATLLKKSVSHPEEEVFWRGGRFGRGHQVNGGRG 273

Query: 273 GRGRFRYRSMGRQNWGSDDSEEEENEATLLE 288
           GRG +R R    +NW   D  E  +   + E
Sbjct: 274 GRGDWRRRD---ENWRDIDGPESSHRRAVEE 301

BLAST of Lcy05g012930 vs. NCBI nr
Match: CAB4268866.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 161.4 bits (407), Expect = 2.2e-35
Identity = 86/263 (32.70%), Postives = 137/263 (52.09%), Query Frame = 0

Query: 10  LRLSQKESCGISKEELGILGNNLNLENRLACKVATNRIINTDAFRRVMCKAWNFCRDLTI 69
           L L+ KE  G+  E       N  L   L   V T++  N +AF++ M +AW   R++ +
Sbjct: 18  LSLTNKEQDGLHIESDDTTTMNERLHLCLVGTVLTDQGFNGEAFKQTMLRAWGTMREVGV 77

Query: 70  DNVGDNIFLVNPQSAQGRDRIIEESLWCFNRCLILLATPSTFDQPEEIVFDTAIYWVQFH 129
            ++ DN+FL    + + ++ +I    W F++ L+LL TP     P  +V   A +WVQ H
Sbjct: 78  KDLRDNLFLFTFTTMRDKEMVIRRGPWNFDKQLVLLETPYGNRAPNRMVLQNADFWVQAH 137

Query: 130 NVPIGLRNEKVARILGGRIGEVLKIDTNEVDECCGRFLRVRVKLQFNEPLCRGLTLNGGP 189
           N+P+        R +G R+G+ + +      EC G++L +RV+L   +PL R + L    
Sbjct: 138 NLPLNRMTVTTGRQIGNRLGQCIDVMEGAYGECLGKYLHIRVRLDVTKPLRRVMKLQFDH 197

Query: 190 TGKVLVGIKYERLPDFCYICGMLGHNDGSCP-----ENKKSEKQFGSWLRAETYHMPRSP 249
           + K ++  KYERLPDFCY CG +GH    C      E +  EK +GSWL ++ + + R  
Sbjct: 198 SLKAVIEFKYERLPDFCYACGRIGHVVKECKFVGAMEKEAKEKPYGSWLHSK-FEVGR-- 257

Query: 250 FTGGRSYDSGRRGRGRFRYRSMG 268
              GR+ + G++  GR   RS G
Sbjct: 258 ---GRTINPGKQEEGRNSQRSFG 274

BLAST of Lcy05g012930 vs. NCBI nr
Match: XP_024035600.1 (uncharacterized protein LOC112096408 [Citrus clementina])

HSP 1 Score: 161.0 bits (406), Expect = 2.9e-35
Identity = 76/240 (31.67%), Postives = 136/240 (56.67%), Query Frame = 0

Query: 2   DIVEKLNSLRLSQKESCGIS-KEELGILGNNLNLENRLACKVATNRIINTDAFRRVMCKA 61
           +++ K  ++ L  +E   IS    + + G  L + + L  K+   R +  +  R  M +A
Sbjct: 21  ELIRKCEAITLQSEEDNIISFGRNMKVRGERL-VAHCLVGKILQTRSVPREGLRAAMQQA 80

Query: 62  WNFCRDLTIDNVGDNIFLVNPQSAQGRDRIIEESLWCFNRCLILLATPSTFDQPEEIVFD 121
           W   ++  ++++GDNIFL    S   + RI+    W F+R L+++  P      ++  F 
Sbjct: 81  WRTTKETKVESLGDNIFLFKFASESEKKRILFGGPWHFDRSLMVVTEPMGIGDVKKQDFT 140

Query: 122 TAIYWVQFHNVPIGLRNEKVARILGGRIGEVLKIDTNEVDECCGRFLRVRVKLQFNEPLC 181
            A++WVQ HN+PI   ++++ + +GGRIG+V +++T++  EC G F+RVR+ +    PL 
Sbjct: 141 HALFWVQIHNIPIMCMDKEIIQEIGGRIGKVQEVETDDAGECMGSFVRVRIMVNVTRPLP 200

Query: 182 RGLTLNGGPTGKVLVGIKYERLPDFCYICGMLGHNDGSCPENK---KSEKQFGSWLRAET 238
           + L L     G++ + I YE+LPDFC+ CG++GH    C + K   K +  +G+W+RA+T
Sbjct: 201 KRLLLKLEDRGQISLRIAYEKLPDFCFCCGLIGHQYRECLDYKGQSKDDLTYGAWMRAQT 259

BLAST of Lcy05g012930 vs. NCBI nr
Match: TXG54301.1 (hypothetical protein EZV62_019557 [Acer yangbiense])

HSP 1 Score: 161.0 bits (406), Expect = 2.9e-35
Identity = 90/279 (32.26%), Postives = 156/279 (55.91%), Query Frame = 0

Query: 23  EELGILGNNLNLENRLACKVATNRIINTDAFRRVMCKAWNFCRDLTIDNVGDNIFLVNPQ 82
           EE+G +G   ++ + L  K+ + R +N +AFR V+   W+   ++ I+ V +N+FL    
Sbjct: 27  EEVGRVGEE-DVNHCLVGKILSGRRVNREAFRMVIESLWSPFGNVDIEMVSENVFLFFFN 86

Query: 83  SAQGRDRIIEESLWCFNRCLILLATPSTFDQPEEIVFDTAIYWVQFHNVPIGLRNEKVAR 142
             + R+++ +   W F++CL++L  P    +  ++ F+ A +W+Q H++PI   N + A+
Sbjct: 87  KPEDRNKVWDRGPWHFDKCLLVLEKPEGTGEISKLKFNKADFWIQIHDIPIMCMNRRTAK 146

Query: 143 ILGGRIGEVLKIDTNEVDECCGRFLRVRVKLQFNEPLCRGLTLNGGPTGK-VLVGIKYER 202
            L  +IGEV++I T+  D C G+FLRV+V++  ++PL R L L    +G  V+VG+KYER
Sbjct: 147 WLAEQIGEVIEIPTDSRD-CWGKFLRVKVRIDISKPLKRWLRLGLDRSGNIVVVGLKYER 206

Query: 203 LPDFCYICGMLGHNDGSCPENKKSEK-------QFGSWLRA---ETYHMPRSPFTG---- 262
           LP+FCY CG LGH    CP+ +  ++       +FG W+RA       +   P TG    
Sbjct: 207 LPEFCYACGWLGHGISECPDTEAKKEAMEGATLRFGPWMRAPIQRNRKISHHPSTGIPKE 266

Query: 263 ---GRSYDSGRRGRGR----FRYRSMGRQNWGSDDSEEE 280
              G ++ + R G+ R    FR+++      G D + ++
Sbjct: 267 AASGETFYNLRGGKARRIDVFRWQNQNSTERGVDHNIQQ 303

BLAST of Lcy05g012930 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 73.2 bits (178), Expect = 7.4e-13
Identity = 35/125 (28.00%), Postives = 56/125 (44.80%), Query Frame = 0

Query: 96  WCFNRCLILLATPSTFDQPEEIVFDTAIYWVQFHNVPIGLRNEKVARILGGRIGEVLKID 155
           W FN   I L     F   + + F     WV    +P+   +E+   I+   +GEV+ +D
Sbjct: 97  WVFNEWFIALQRWEDFPTEDFLTFIDV--WVHIRGIPLPYVSERTVEIIASTLGEVVAMD 156

Query: 156 TNEVDECCGRFLRVRVKLQFNEPLCRGLTLNGGPTGKVLVGIKYERLPDFCYICGMLGHN 215
            NE       F+RV+V++ F EPL     +      + ++G +YE+L   C  C  + H 
Sbjct: 157 FNEETTSQITFIRVKVRMDFTEPLRFFRRVRFASRERAMIGFEYEKLQRVCTNCCRVNHQ 216

Query: 216 DGSCP 221
              CP
Sbjct: 217 VSHCP 219

BLAST of Lcy05g012930 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12
Identity = 41/141 (29.08%), Postives = 60/141 (42.55%), Query Frame = 0

Query: 88  DRIIEESLWCFNRCLILLATPSTFDQPEEIVFDTAIYWVQFHNVPIGLRNEKVARILGGR 147
           + ++    W FN  +ILL       +P+  +F    +WVQ   +P    N  V   +G  
Sbjct: 184 ETVLRRGPWAFNDWMILLQR----WEPQIPLFPFIPFWVQIRGIPFQFLNRGVVEHIGRA 243

Query: 148 IGEVLKIDTNEVDECCGRFLRVRVKLQFNEPLCRGLTLNGGPTGKVLVGIKYERLPDFCY 207
           +G+VL  D N        F RV +      PL              L+  +YERL  FC 
Sbjct: 244 LGQVLDTDFNVEVVARMDFARVLLHWDITHPLRFQRHFQFTAGVNTLLRFRYERLRGFCE 303

Query: 208 ICGMLGHNDGSCPENKKSEKQ 229
           +CGML H+ G+C      E+Q
Sbjct: 304 VCGMLTHDFGACLIQNGGEEQ 320

BLAST of Lcy05g012930 vs. TAIR 10
Match: AT2G01050.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 63.5 bits (153), Expect = 5.9e-10
Identity = 34/114 (29.82%), Postives = 54/114 (47.37%), Query Frame = 0

Query: 109 STFDQPEEIVFDTAIYWVQFHNVPIGLRNEKVARILGGRIGEVLKIDTNEVDECCGRFLR 168
           S FD   + +  T + WV+  N+P    +  +   +   +G  LK+D N ++   GRF R
Sbjct: 152 SRFDPLRDDIVTTPV-WVRLSNIPYNYYHRCLLMEIARGLGRPLKVDMNTINFDKGRFAR 211

Query: 169 VRVKLQFNEPLCRGLTLNGGPTGKVLVGIKYERLPDFCYICGMLGHNDGSCPEN 223
           V +++   +PL   + +NG         + YE L   C  CG+ GH   SCP N
Sbjct: 212 VCIEVNLAKPLKGTVLINGD-----RYFVAYEGLSKICSSCGIYGHLVHSCPRN 259

BLAST of Lcy05g012930 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 43.9 bits (102), Expect = 4.8e-04
Identity = 22/56 (39.29%), Postives = 28/56 (50.00%), Query Frame = 0

Query: 165 RFLRVRVKLQFNEPLCRGLTLNGGPTGKVLVGIKYERLPDFCYICGMLGHNDGSCP 221
           RFL  R+     E +   L  N G    VL   +YE+L +FC  CGML H+   CP
Sbjct: 117 RFLTARIITSIGERMGLFLETNLGRDVSVL-KFQYEKLKNFCTTCGMLSHDASECP 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A1R3K8476.8e-3835.24Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1[more]
A0A6J1D7651.3e-3631.00uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
A0A6J5TXP71.1e-3532.70CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS... [more]
A0A5C7HBM71.4e-3532.26CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01955... [more]
A0A7N2KYZ32.0e-3436.82CCHC-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
OMP03234.11.4e-3735.24hypothetical protein COLO4_10561 [Corchorus olitorius][more]
XP_022149484.12.6e-3631.00uncharacterized protein LOC111017902 [Momordica charantia][more]
CAB4268866.12.2e-3532.70unnamed protein product [Prunus armeniaca][more]
XP_024035600.12.9e-3531.67uncharacterized protein LOC112096408 [Citrus clementina][more]
TXG54301.12.9e-3532.26hypothetical protein EZV62_019557 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
AT5G36228.17.4e-1328.00nucleic acid binding;zinc ion binding [more]
AT3G31430.11.7e-1229.08unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G01050.15.9e-1029.82zinc ion binding;nucleic acid binding [more]
AT3G42140.14.8e-0439.29zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 30..171
e-value: 9.2E-22
score: 77.1
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 185..220
e-value: 1.5E-11
score: 43.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..347
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 434..460
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..259
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 506..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..351
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 461..475
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..505
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 424..521
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..326
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 35..298
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 35..298
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 206..221
score: 8.713199

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g012930.1Lcy05g012930.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding