Lcy05g012930 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATATTGTTGAGAAACTAAATTCACTCAGGCTCTCCCAAAAGGAGTCTTGTGGGATTAGTAAAGAAGAACTAGGCATACTGGGGAATAACTTGAATCTGGAAAATCGTTTGGCTTGTAAAGTTGCTACGAACCGGATTATCAACACAGATGCGTTCCGAAGAGTAATGTGCAAGGCCTGGAATTTTTGTCGAGACTTAACTATTGATAACGTTGGTGATAATATCTTCCTTGTTAACCCGCAATCAGCTCAAGGGCGCGACAGAATTATCGAGGAAAGTCTTTGGTGTTTTAATAGATGTTTGATCCTCCTTGCAACACCATCAACATTTGACCAGCCGGAAGAAATTGTGTTCGATACGGCAATATACTGGGTTCAATTCCACAACGTTCCAATCGGACTGAGAAACGAAAAGGTGGCTCGAATTTTAGGTGGTCGGATAGGCGAGGTCCTTAAAATCGACACCAACGAAGTTGATGAATGTTGCGGTCGTTTCCTCCGTGTGAGAGTGAAACTGCAATTCAACGAACCACTTTGTCGTGGCTTAACACTAAACGGCGGCCCAACAGGTAAAGTTTTAGTTGGAATAAAGTATGAACGATTACCCGACTTCTGCTATATTTGTGGAATGCTAGGGCACAATGATGGATCTTGTCCGGAGAACAAAAAATCGGAGAAACAGTTCGGATCTTGGCTTCGAGCAGAAACTTACCACATGCCCAGAAGCCCATTCACCGGCGGCCGATCTTATGACTCAGGACGGAGAGGACGCGGACGATTCAGGTATCGTTCAATGGGCAGGCAGAATTGGGGATCTGATGATTCTGAGGAGGAAGAAAACGAAGCAACACTACTGGAAAGAACAGGCCAATCGGATGTCAGAAATAAGCTCGCCGAAGAAGACCAGAACCGACCGGAAAAAGAAGAAACTCAGAGATCACCGGAATCCCATCGACGGAAAAGGAATGAAACTGACCTTCAGCCACAATCAATGTCACCGACGCAATCTATGGAAACCGAATCACCCAAAAACGGTAAAAATTCATTTATTGCAGGCTTATTCCCAAAAACGGCTGAGCAAGATGCTGAAGGGGAGAAATCGATCCTCAAGGAAGCTCCTTTAATGGCTGAAGATTTATTCCCAAATATGGAGGAGAGAGAAGAGAACCCAATCATGAAGAATCTAATGGATCAAATTGAAGAGAGGGCTCAACAACATGAATTTGGGCCTGGCATCCTTATGGGCCAAGTGGATTCTGACTTCCAGGAGAATGAAGGAGACAAAGCCCACACAAAAAATACTAATCACATTGGGCCCTCCAACGAGTTTCACAACATGGAGGTGGATCCCAACTCTTGTCACTCACAGAATGGGGGCCAACGTCAGACTGAAGAAAGGGAAGCGAGCAAAGTCGTGGTGAGGAAAAATGCAAAGTCGTGGAAGCGAGCAAACAGAAAGGGAAGTCAATGGGTAACTAAAAATTCCAATTCACAAACTCTTACGAGCTCTATTGGAAAGAAAAGAGACTCAGATGAACTCCCTTTGAAAGATAGTGAAGGAAAGAAGATCAAATGTATCACATCAGAGATCGATACGATTATATCGGCGGAGCCTGTTAAACAGGCCCGCCGAGAGCCATGA ATGGATATTGTTGAGAAACTAAATTCACTCAGGCTCTCCCAAAAGGAGTCTTGTGGGATTAGTAAAGAAGAACTAGGCATACTGGGGAATAACTTGAATCTGGAAAATCGTTTGGCTTGTAAAGTTGCTACGAACCGGATTATCAACACAGATGCGTTCCGAAGAGTAATGTGCAAGGCCTGGAATTTTTGTCGAGACTTAACTATTGATAACGTTGGTGATAATATCTTCCTTGTTAACCCGCAATCAGCTCAAGGGCGCGACAGAATTATCGAGGAAAGTCTTTGGTGTTTTAATAGATGTTTGATCCTCCTTGCAACACCATCAACATTTGACCAGCCGGAAGAAATTGTGTTCGATACGGCAATATACTGGGTTCAATTCCACAACGTTCCAATCGGACTGAGAAACGAAAAGGTGGCTCGAATTTTAGGTGGTCGGATAGGCGAGGTCCTTAAAATCGACACCAACGAAGTTGATGAATGTTGCGGTCGTTTCCTCCGTGTGAGAGTGAAACTGCAATTCAACGAACCACTTTGTCGTGGCTTAACACTAAACGGCGGCCCAACAGGTAAAGTTTTAGTTGGAATAAAGTATGAACGATTACCCGACTTCTGCTATATTTGTGGAATGCTAGGGCACAATGATGGATCTTGTCCGGAGAACAAAAAATCGGAGAAACAGTTCGGATCTTGGCTTCGAGCAGAAACTTACCACATGCCCAGAAGCCCATTCACCGGCGGCCGATCTTATGACTCAGGACGGAGAGGACGCGGACGATTCAGGTATCGTTCAATGGGCAGGCAGAATTGGGGATCTGATGATTCTGAGGAGGAAGAAAACGAAGCAACACTACTGGAAAGAACAGGCCAATCGGATGTCAGAAATAAGCTCGCCGAAGAAGACCAGAACCGACCGGAAAAAGAAGAAACTCAGAGATCACCGGAATCCCATCGACGGAAAAGGAATGAAACTGACCTTCAGCCACAATCAATGTCACCGACGCAATCTATGGAAACCGAATCACCCAAAAACGGTAAAAATTCATTTATTGCAGGCTTATTCCCAAAAACGGCTGAGCAAGATGCTGAAGGGGAGAAATCGATCCTCAAGGAAGCTCCTTTAATGGCTGAAGATTTATTCCCAAATATGGAGGAGAGAGAAGAGAACCCAATCATGAAGAATCTAATGGATCAAATTGAAGAGAGGGCTCAACAACATGAATTTGGGCCTGGCATCCTTATGGGCCAAGTGGATTCTGACTTCCAGGAGAATGAAGGAGACAAAGCCCACACAAAAAATACTAATCACATTGGGCCCTCCAACGAGTTTCACAACATGGAGGTGGATCCCAACTCTTGTCACTCACAGAATGGGGGCCAACGTCAGACTGAAGAAAGGGAAGCGAGCAAAGTCGTGGTGAGGAAAAATGCAAAGTCGTGGAAGCGAGCAAACAGAAAGGGAAGTCAATGGGTAACTAAAAATTCCAATTCACAAACTCTTACGAGCTCTATTGGAAAGAAAAGAGACTCAGATGAACTCCCTTTGAAAGATAGTGAAGGAAAGAAGATCAAATGTATCACATCAGAGATCGATACGATTATATCGGCGGAGCCTGTTAAACAGGCCCGCCGAGAGCCATGA ATGGATATTGTTGAGAAACTAAATTCACTCAGGCTCTCCCAAAAGGAGTCTTGTGGGATTAGTAAAGAAGAACTAGGCATACTGGGGAATAACTTGAATCTGGAAAATCGTTTGGCTTGTAAAGTTGCTACGAACCGGATTATCAACACAGATGCGTTCCGAAGAGTAATGTGCAAGGCCTGGAATTTTTGTCGAGACTTAACTATTGATAACGTTGGTGATAATATCTTCCTTGTTAACCCGCAATCAGCTCAAGGGCGCGACAGAATTATCGAGGAAAGTCTTTGGTGTTTTAATAGATGTTTGATCCTCCTTGCAACACCATCAACATTTGACCAGCCGGAAGAAATTGTGTTCGATACGGCAATATACTGGGTTCAATTCCACAACGTTCCAATCGGACTGAGAAACGAAAAGGTGGCTCGAATTTTAGGTGGTCGGATAGGCGAGGTCCTTAAAATCGACACCAACGAAGTTGATGAATGTTGCGGTCGTTTCCTCCGTGTGAGAGTGAAACTGCAATTCAACGAACCACTTTGTCGTGGCTTAACACTAAACGGCGGCCCAACAGGTAAAGTTTTAGTTGGAATAAAGTATGAACGATTACCCGACTTCTGCTATATTTGTGGAATGCTAGGGCACAATGATGGATCTTGTCCGGAGAACAAAAAATCGGAGAAACAGTTCGGATCTTGGCTTCGAGCAGAAACTTACCACATGCCCAGAAGCCCATTCACCGGCGGCCGATCTTATGACTCAGGACGGAGAGGACGCGGACGATTCAGGTATCGTTCAATGGGCAGGCAGAATTGGGGATCTGATGATTCTGAGGAGGAAGAAAACGAAGCAACACTACTGGAAAGAACAGGCCAATCGGATGTCAGAAATAAGCTCGCCGAAGAAGACCAGAACCGACCGGAAAAAGAAGAAACTCAGAGATCACCGGAATCCCATCGACGGAAAAGGAATGAAACTGACCTTCAGCCACAATCAATGTCACCGACGCAATCTATGGAAACCGAATCACCCAAAAACGGTAAAAATTCATTTATTGCAGGCTTATTCCCAAAAACGGCTGAGCAAGATGCTGAAGGGGAGAAATCGATCCTCAAGGAAGCTCCTTTAATGGCTGAAGATTTATTCCCAAATATGGAGGAGAGAGAAGAGAACCCAATCATGAAGAATCTAATGGATCAAATTGAAGAGAGGGCTCAACAACATGAATTTGGGCCTGGCATCCTTATGGGCCAAGTGGATTCTGACTTCCAGGAGAATGAAGGAGACAAAGCCCACACAAAAAATACTAATCACATTGGGCCCTCCAACGAGTTTCACAACATGGAGGTGGATCCCAACTCTTGTCACTCACAGAATGGGGGCCAACGTCAGACTGAAGAAAGGGAAGCGAGCAAAGTCGTGGTGAGGAAAAATGCAAAGTCGTGGAAGCGAGCAAACAGAAAGGGAAGTCAATGGGTAACTAAAAATTCCAATTCACAAACTCTTACGAGCTCTATTGGAAAGAAAAGAGACTCAGATGAACTCCCTTTGAAAGATAGTGAAGGAAAGAAGATCAAATGTATCACATCAGAGATCGATACGATTATATCGGCGGAGCCTGTTAAACAGGCCCGCCGAGAGCCATGA MDIVEKLNSLRLSQKESCGISKEELGILGNNLNLENRLACKVATNRIINTDAFRRVMCKAWNFCRDLTIDNVGDNIFLVNPQSAQGRDRIIEESLWCFNRCLILLATPSTFDQPEEIVFDTAIYWVQFHNVPIGLRNEKVARILGGRIGEVLKIDTNEVDECCGRFLRVRVKLQFNEPLCRGLTLNGGPTGKVLVGIKYERLPDFCYICGMLGHNDGSCPENKKSEKQFGSWLRAETYHMPRSPFTGGRSYDSGRRGRGRFRYRSMGRQNWGSDDSEEEENEATLLERTGQSDVRNKLAEEDQNRPEKEETQRSPESHRRKRNETDLQPQSMSPTQSMETESPKNGKNSFIAGLFPKTAEQDAEGEKSILKEAPLMAEDLFPNMEEREENPIMKNLMDQIEERAQQHEFGPGILMGQVDSDFQENEGDKAHTKNTNHIGPSNEFHNMEVDPNSCHSQNGGQRQTEEREASKVVVRKNAKSWKRANRKGSQWVTKNSNSQTLTSSIGKKRDSDELPLKDSEGKKIKCITSEIDTIISAEPVKQARREP Homology
BLAST of Lcy05g012930 vs. ExPASy TrEMBL
Match: A0A1R3K847 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_10561 PE=4 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 6.8e-38 Identity = 74/210 (35.24%), Postives = 118/210 (56.19%), Query Frame = 0
BLAST of Lcy05g012930 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.3e-36 Identity = 84/271 (31.00%), Postives = 141/271 (52.03%), Query Frame = 0
BLAST of Lcy05g012930 vs. ExPASy TrEMBL
Match: A0A6J5TXP7 (CCHC-type domain-containing protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS13519 PE=4 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 1.1e-35 Identity = 86/263 (32.70%), Postives = 137/263 (52.09%), Query Frame = 0
BLAST of Lcy05g012930 vs. ExPASy TrEMBL
Match: A0A5C7HBM7 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019557 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 1.4e-35 Identity = 90/279 (32.26%), Postives = 156/279 (55.91%), Query Frame = 0
BLAST of Lcy05g012930 vs. ExPASy TrEMBL
Match: A0A7N2KYZ3 (CCHC-type domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 2.0e-34 Identity = 81/220 (36.82%), Postives = 118/220 (53.64%), Query Frame = 0
BLAST of Lcy05g012930 vs. NCBI nr
Match: OMP03234.1 (hypothetical protein COLO4_10561 [Corchorus olitorius]) HSP 1 Score: 168.7 bits (426), Expect = 1.4e-37 Identity = 74/210 (35.24%), Postives = 118/210 (56.19%), Query Frame = 0
BLAST of Lcy05g012930 vs. NCBI nr
Match: XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia]) HSP 1 Score: 164.5 bits (415), Expect = 2.6e-36 Identity = 84/271 (31.00%), Postives = 141/271 (52.03%), Query Frame = 0
BLAST of Lcy05g012930 vs. NCBI nr
Match: CAB4268866.1 (unnamed protein product [Prunus armeniaca]) HSP 1 Score: 161.4 bits (407), Expect = 2.2e-35 Identity = 86/263 (32.70%), Postives = 137/263 (52.09%), Query Frame = 0
BLAST of Lcy05g012930 vs. NCBI nr
Match: XP_024035600.1 (uncharacterized protein LOC112096408 [Citrus clementina]) HSP 1 Score: 161.0 bits (406), Expect = 2.9e-35 Identity = 76/240 (31.67%), Postives = 136/240 (56.67%), Query Frame = 0
BLAST of Lcy05g012930 vs. NCBI nr
Match: TXG54301.1 (hypothetical protein EZV62_019557 [Acer yangbiense]) HSP 1 Score: 161.0 bits (406), Expect = 2.9e-35 Identity = 90/279 (32.26%), Postives = 156/279 (55.91%), Query Frame = 0
BLAST of Lcy05g012930 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding ) HSP 1 Score: 73.2 bits (178), Expect = 7.4e-13 Identity = 35/125 (28.00%), Postives = 56/125 (44.80%), Query Frame = 0
BLAST of Lcy05g012930 vs. TAIR 10
Match: AT3G31430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18636.1); Has 295 Blast hits to 291 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 295; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-12 Identity = 41/141 (29.08%), Postives = 60/141 (42.55%), Query Frame = 0
BLAST of Lcy05g012930 vs. TAIR 10
Match: AT2G01050.1 (zinc ion binding;nucleic acid binding ) HSP 1 Score: 63.5 bits (153), Expect = 5.9e-10 Identity = 34/114 (29.82%), Postives = 54/114 (47.37%), Query Frame = 0
BLAST of Lcy05g012930 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding ) HSP 1 Score: 43.9 bits (102), Expect = 4.8e-04 Identity = 22/56 (39.29%), Postives = 28/56 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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