Lcy05g012190 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy05g012190
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	Cold regulated protein 27, putative isoform 2
Location	Chr05: 14021543 .. 14025853 (+)
RNA-Seq Expression	Lcy05g012190
Synteny	Lcy05g012190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACCACCACCATTCACCGCTTCTCTCTCCTCTTCTTCTTCCTCCTCTCTCTCTCTCTTCATTTCATTTCTGCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCGCCCACGATTCCTTTTTCTTCTCTCTTTTTCCTTCATTTCATCTTCTATATTTGCTTTCTCCCAGCGATTTCCCCTTGTTTTTGATCCATCAATAATGGGAGACCATCTGCCGTCGTCCGTATCGCCGCCGGTTGCTGATCGACAACCACCCTCGGCGGCCTCTGCTAGCTACTTGACTCGCTTGAACTCCGAATCCTACTCTTCTTCCATTACTCTTGACGGCTTCAAGGATTTGCCTGCTCATCGTTGTCTGGAACTGGATGCGGTAAAATTGCGACTCTTCTGCCTTTTGTTTGTTTGCTTTTTCCTGTTTCTTGGAAGTATGATTTGGGTTTTCCTCGGTATGGACGAGTTGTTGTTTGCTGATTGTACTTTGTTTTCTCTTTGAACGTAGCACTAGGAGATCGTGTGACCTATTTTTTGTGCACTCGAAACTAATATGTCTGATTATGTGTGGTTTTTATTCTTTTCGTGGTGCCTTTCCAAATTTTTAATGGTAAAGTGGTCTTGGTACCTCCCATTTGGGTTTATTTTAAACTTGCAAGACAGGGGAGATATGTACTTGTATATAATTGCAGTTTCAGTGCCTTGTCTTCACCATTTTTCTGTTTTCCCTTTTTTCCTTTGTGCTTTAATGGGTGTGGAAGAGAAATCCTTTTGCAATGCTTGATTTCGTTGTTATACTAAATTTCTTTATTTTTCCATCTGTATCAGTGTTTAGTTTTAGGGCATATTCAAGTTAAATCACGGATGGATTTTGAATTAAGTCTCTGAGATTCACTTTTCTTTTTTTGAAAAAAAAAAAAAAACATTTTATTCTTGGAATTTCCCAAGTGTTAGCAGTTCTGTTTGTAAAGGATCCATTTTATTTGTAGCAAATGTTTTTGCTGAAAAGTCTAGCCCTATATTGGGGAACAATCTGAAAATTTCACATGAATAAAATTAGGTATGGTTTCATTAATTGTCGATCAAAGTCATGTGTTCCAAATTTTTAGTTAAAAACTTTTGACCGAACTTTAGGGACATTTCTTTGAGGTGCATATTTTCAAATTTATGGAAATGGGTTTCTCAATTGAAAATATGTGAACAGGTGCATACACATTGGACAGATGAGAAACACAGATCATATCTTGATTCTTTAGAGGCATCTTTTGTCCAAGAGTTACATCAATATAGACACTTGCATGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCATAATATATCTACTTCAGAGGTGAGGCAATACATCCACAGCAAGAGTGGTAGTGAGTTGCCTATCTCATTCCTCTTCCTCCTTAATGATTTCCTCTTGTTGTATTTTTTTAGTTGATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGATGAATGATCCTTTATTGGATAGGACTGCCGATTCTCCTGCTATTTTAGAGGATGTATGGATAAATCATTTTCCTTCTGCAGGAAAACAGTGTGCTCTGGATTCTCCTGATCTCCTTGAAGAATGTGGAACTTGTAGTGATAGGAGACACTTAAGAAACACGAAAAGCTCCTGTGGATCTGCCAGAAGTTCACAGCAGATCCCTCCATGCTGTCGTGATTCTTATGCAGTCATTACAGGTAATTTTGATTGATGTCATGTGTTCTTGAAAGTTTCCCTTTCTAGAACTTATGTCTCTTTTATGTTGTTGGTTCTTTATATATTCTTTTCTGTTGTCTACGTAGTACATCTTCTACCCCCCAAGTTCCTCTGACAGTGTCGAACCTGAACACATCGATCATGTTTTTCAAACCCCTAAGTTTCAGTTTTCATTGATTCTTCCTTGTAATTTATACTTAAAATTTGTAACTTATATCATTATTTTGCATATACACTAACGACATTGATTGATCATACACTTCATGTTTTGTTGTGATCTTCCAATCGTATTTTGTTATGGAGAAGGTGTTTGCAATATTTGCTTTAGTAGTCAGTATTCACCTTTAGAAGCCTTTTGATGGCATTCGTTTTTCTGATTTAAGTTCGTGATTGGTGTAGTAATATGATGATTACTCTGTAGTGTTCCCACTAGTTTGCCTTTTTGCCTACACCATTGAAGTCCTGCAAATCTTCTTTCCAATCTTATCACGTGTTTGTTTGAATTTTGTGTTCGTCAAATGTATTGCCTCCAGAGGAAAGAAGAATGTGAGAGGGGTTCTGGAATTAAAGATATTACTTAATGCATGTTAGTTGTAAAATTGGTATGTTAAGCTTAAGATTTTGTGTTAATCTCTTAGTAATGGAAGATCTCTATATTCTGATTTTATAATTGGTTAGTTTTAAGATGGTTTTCAGTGTGGTGATAACTTTGTTTCCATAGCATGATTTTTAGTGTTTACGCTAGGGGAACACTGAAGATTTCTTCATGCTATTTCAATTTCACAATTAAGAATTCATGGATTAGCTGATGGCATATCTTATCTTTGAGATTTGATGTATATTTGTAAGTGAAAAAGTAGAAGTTTGTTTGAAGTTAGATGACCATTGCCGTCCTATGTATTAGTGGTAAAAATGAGTAAAACTGAGTAGACACCACTAGGATGGACTGCATTCTGATATTGTTGAACTGCTAAAAGAAGCCAGGCTGATGGTACTAGTTCTAGAACAGTAGCTGATTAGGAATGAATCAAAGCAGAAATTCTTCGACATTGGAGTTGAAGGAAGAGAAAAGAGCAGTCATGTTGACACTTTAATGGGTCTCAATTTATGAAGTTCACATAAAGGTCTTTTTCTCCACTTTGAATATATATAAACGTTCCTGTGGAGTAGAAAACCCTGCTGAAGAATAGTTTTATTAACATAGGTCAAATAAATGACAAAATAATTTGAATCTTAAGCATAAGGAGACTTAAAAAGCTACCTTTTACAAAGCTGAATGACTCGTGGATTCACAATTCAGCAAGAAAGAACAAATTAAGGTTTCTTCTCTTAGAGGGTTCAATCCTGTTTGTTAAGTTTAATGATCAAATACCTAGGCTGAGATGTTAAAGGGTGAATTCTTCCCGTCTCATCTTAAGGTGTATGCTACAATACTCTCTGTTAAAGAAGTTAATTTGAAAGTATCAATTTAACAAGATTCATAATTTGGAAATTGTGGATGCTCCAGAGTTCATCTTCTTTTTTTATTTTTATTTTGTTTATTATTATTTTATTTTTATTTTTTTAAAATCTTTTAATTTTTGGGAAGGCTTGTGGTGAAAACATTGCGGAATGGTTTTATGTGATTTGCCTGTTGTCATACTAACTTGGTGTCTTTTTCTTTTCATTTTGTCTTTTGCGTAGAAGTTTCAGATCAAAACTTTGTGGATAATCATTCAGGAGAGTTGTCTGATGGCATGTTTATTGCAAAAAGACTAAAGAAAACTACTTCTGATTCTTTGAGCGACAACCAGGTAAACTCAGGATTGCCCTTGATATCTCTTTGGAAAACTTATCATTGCATTGTACAAATTATCTGAGACTAATTTGCTGCTATTTGATCTCTTAGGTTGTATCATATAAGAATAAGAGATTATCATCAGAAAGATAAAAGCCAGACGCCAAATTGTCTTCAGAACATCCTCAAAACTTTGTGCCTCGAAATTCAGATTTGTGTTACTTTGTAAAAGGGAGCTGACAACAATTCGTTCCAACATGTGAAAACATTAGCTTTCCAAGCTCATTAACCAAATGCCACACGGTTTTGTTTTCCATTCGAGAGAGCATTGTAAAGAAACTCAATAAGGGAAGTGGCAGCAATAATTCTTGACCAGAAGATCTGCGGCAGGAAGGAGAAAATATGTTTGTATATGGTACAAACTAAACTTTTTCCTAGTTCAAATATTGAGTGAAATATACGTTAACCTTTTCTTTTCTCCAGTTTCCTTTTCCTTAGAGGTTGAAAAAAATGGAAATTCTAATAGCTCAATATACATGTTATAGAGAAGCTAGACACCCTGATAGTGAGATAGAATACATACCTTTTCTGATTTGTTTTAAATAGTGTCATTTTGAAGTTCTGTTAGAAATCTCAAGTGTAAATTATTACATAAAACAAAGTGCCATTCTTTTGTGACACTGAGAAAGAATTGAACGAGCTTGTTGATTTTCTTTAGGGGGTAAAGTTTCATTATATTGTATCCTGAGATTGATTAATTTTCTTTAGGGGGTGAAGAT

mRNA sequence

ACCACCACCATTCACCGCTTCTCTCTCCTCTTCTTCTTCCTCCTCTCTCTCTCTCTTCATTTCATTTCTGCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCGCCCACGATTCCTTTTTCTTCTCTCTTTTTCCTTCATTTCATCTTCTATATTTGCTTTCTCCCAGCGATTTCCCCTTGTTTTTGATCCATCAATAATGGGAGACCATCTGCCGTCGTCCGTATCGCCGCCGGTTGCTGATCGACAACCACCCTCGGCGGCCTCTGCTAGCTACTTGACTCGCTTGAACTCCGAATCCTACTCTTCTTCCATTACTCTTGACGGCTTCAAGGATTTGCCTGCTCATCGTTGTCTGGAACTGGATGCGGTGCATACACATTGGACAGATGAGAAACACAGATCATATCTTGATTCTTTAGAGGCATCTTTTGTCCAAGAGTTACATCAATATAGACACTTGCATGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCATAATATATCTACTTCAGAGTTGATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGATGAATGATCCTTTATTGGATAGGACTGCCGATTCTCCTGCTATTTTAGAGGATGTATGGATAAATCATTTTCCTTCTGCAGGAAAACAGTGTGCTCTGGATTCTCCTGATCTCCTTGAAGAATGTGGAACTTGTAGTGATAGGAGACACTTAAGAAACACGAAAAGCTCCTGTGGATCTGCCAGAAGTTCACAGCAGATCCCTCCATGCTGTCGTGATTCTTATGCAGTCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCATTCAGGAGAGTTGTCTGATGGCATGTTTATTGCAAAAAGACTAAAGAAAACTACTTCTGATTCTTTGAGCGACAACCAGGTTGTATCATATAAGAATAAGAGATTATCATCAGAAAGATAAAAGCCAGACGCCAAATTGTCTTCAGAACATCCTCAAAACTTTGTGCCTCGAAATTCAGATTTGTGTTACTTTGTAAAAGGGAGCTGACAACAATTCGTTCCAACATGTGAAAACATTAGCTTTCCAAGCTCATTAACCAAATGCCACACGGTTTTGTTTTCCATTCGAGAGAGCATTGTAAAGAAACTCAATAAGGGAAGTGGCAGCAATAATTCTTGACCAGAAGATCTGCGGCAGGAAGGAGAAAATATGTTTGTATATGGTACAAACTAAACTTTTTCCTAGTTCAAATATTGAGTGAAATATACGTTAACCTTTTCTTTTCTCCAGTTTCCTTTTCCTTAGAGGTTGAAAAAAATGGAAATTCTAATAGCTCAATATACATGTTATAGAGAAGCTAGACACCCTGATAGTGAGATAGAATACATACCTTTTCTGATTTGTTTTAAATAGTGTCATTTTGAAGTTCTGTTAGAAATCTCAAGTGTAAATTATTACATAAAACAAAGTGCCATTCTTTTGTGACACTGAGAAAGAATTGAACGAGCTTGTTGATTTTCTTTAGGGGGTAAAGTTTCATTATATTGTATCCTGAGATTGATTAATTTTCTTTAGGGGGTGAAGAT

Coding sequence (CDS)

ATGGGAGACCATCTGCCGTCGTCCGTATCGCCGCCGGTTGCTGATCGACAACCACCCTCGGCGGCCTCTGCTAGCTACTTGACTCGCTTGAACTCCGAATCCTACTCTTCTTCCATTACTCTTGACGGCTTCAAGGATTTGCCTGCTCATCGTTGTCTGGAACTGGATGCGGTGCATACACATTGGACAGATGAGAAACACAGATCATATCTTGATTCTTTAGAGGCATCTTTTGTCCAAGAGTTACATCAATATAGACACTTGCATGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCATAATATATCTACTTCAGAGTTGATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGATGAATGATCCTTTATTGGATAGGACTGCCGATTCTCCTGCTATTTTAGAGGATGTATGGATAAATCATTTTCCTTCTGCAGGAAAACAGTGTGCTCTGGATTCTCCTGATCTCCTTGAAGAATGTGGAACTTGTAGTGATAGGAGACACTTAAGAAACACGAAAAGCTCCTGTGGATCTGCCAGAAGTTCACAGCAGATCCCTCCATGCTGTCGTGATTCTTATGCAGTCATTACAGAAGTTTCAGATCAAAACTTTGTGGATAATCATTCAGGAGAGTTGTCTGATGGCATGTTTATTGCAAAAAGACTAAAGAAAACTACTTCTGATTCTTTGAGCGACAACCAGGTTGTATCATATAAGAATAAGAGATTATCATCAGAAAGATAA

Protein sequence

MGDHLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKDLPAHRCLELDAVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNISTSELMVLQDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNTKSSCGSARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSDNQVVSYKNKRLSSER

Homology

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BLAST of Lcy05g012190 vs. ExPASy Swiss-Prot
Match: Q8L8T7 (Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 8.6e-09
Identity = 63/201 (31.34%), Postives = 93/201 (46.27%), Query Frame = 0


Query: 58  VHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMR--------RKPIMHNISTS 117
           + T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  
Sbjct: 44  METEWTNEKHSLYLKSMEASFVDQL--YNSLGALGKNENVSESTRFGSGRKP-----SQE 103

Query: 118 ELMVLQDASWQKANIGMNDPLLD--RTADSPAILEDVWINHF-PSAGKQCALDSPDLLEE 177
           +  VL D  WQK N+   +  ++     +S   L   WI H+ P    Q  +      + 
Sbjct: 104 QFKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQV 163

Query: 178 CGTCSDRRHLRNTKSSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVDNHSGELSDGM 237
             + + ++ +     S GSA S +Q+    RD   +     EVSDQNFV N   +  +G 
Sbjct: 164 VSSSNGKKGI----CSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFV-NEGIKGENGS 223

Query: 238 FIAKRLKKT-TSDSLSDNQVV 244
             +K++K    S+S S +QVV
Sbjct: 224 --SKKMKTVMMSESSSTDQVV 230

[Close]

BLAST of Lcy05g012190 vs. ExPASy Swiss-Prot
Match: Q8L983 (Cold-regulated protein 28 OS=Arabidopsis thaliana OX=3702 GN=COR28 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 38/124 (30.65%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 15  DRQPPSAASASYLTRLNSESYSSSITLDGFKDLPAHRCLELDAVHTHWTDEKHRSYLDSL 74
           DR    A++ S      S S  S +T +  +     +  E     T WT+EKH SYLD L
Sbjct: 15  DRDVSEASAESQSESTLSNSLDSGVTAETSRSDADSKLDEC----TAWTNEKHNSYLDYL 74

Query: 75  EASFVQELHQYRHLHALSSKQKMRRKPIMHNI--STSELMVLQDASWQKANIGMNDPLLD 134
           E+SFV++L+    L    +++  R + +  N   S  +  VLQ+  WQK N G     L+
Sbjct: 75  ESSFVRQLYS---LLGGGTQRLSRTRDVQSNSHKSADQFTVLQNGCWQKVNFGKKQSCLE 131

Query: 135 RTAD 137
            +++
Sbjct: 135 TSSE 131

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BLAST of Lcy05g012190 vs. ExPASy TrEMBL
Match: A0A6J1GJA3 (uncharacterized protein LOC111454842 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111454842 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.0e-97
Identity = 185/255 (72.55%), Postives = 212/255 (83.14%), Query Frame = 0


Query: 4   HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVH 63
           H PSS+SPPVADR+ P + SAS LTRLNSESYSSS T+D  +     +P+H C +LDAV 
Sbjct: 5   HTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQ 64

Query: 64  THWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNISTSELMVLQDASW 123
           THWT+EKHR +LDSLEASFVQ+LH+YRHL ALSSKQKMRRKPIM NIS+SE MVLQDASW
Sbjct: 65  THWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMVLQDASW 124

Query: 124 QKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNT 183
           QKAN+G  DPLLD+TADSPAILEDVWINHFPSAG QC L++ D+LEECG+CSDR H+RN 
Sbjct: 125 QKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNK 184

Query: 184 KSSCGSARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSD 243
            +S  SARSSQQIPPCCRDS+ ++TEVSDQNFVD H GELSDG  I KRLKK +SDS  +
Sbjct: 185 TNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGN 244

Query: 244 NQVVSYKNKRLSSER 255
           N+V  Y  KRLSSER
Sbjct: 245 NRVAPY--KRLSSER 257

[Close]

BLAST of Lcy05g012190 vs. ExPASy TrEMBL
Match: A0A6J1GKR5 (uncharacterized protein LOC111454842 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454842 PE=4 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 3.6e-95
Identity = 177/243 (72.84%), Postives = 204/243 (83.95%), Query Frame = 0


Query: 4   HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVH 63
           H PSS+SPPVADR+ P + SAS LTRLNSESYSSS T+D  +     +P+H C +LDAV 
Sbjct: 5   HTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQ 64

Query: 64  THWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNISTSELMVLQDASW 123
           THWT+EKHR +LDSLEASFVQ+LH+YRHL ALSSKQKMRRKPIM NIS+SE MVLQDASW
Sbjct: 65  THWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMVLQDASW 124

Query: 124 QKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNT 183
           QKAN+G  DPLLD+TADSPAILEDVWINHFPSAG QC L++ D+LEECG+CSDR H+RN 
Sbjct: 125 QKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNK 184

Query: 184 KSSCGSARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSD 243
            +S  SARSSQQIPPCCRDS+ ++TEVSDQNFVD H GELSDG  I KRLKK +SDS  +
Sbjct: 185 TNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGN 244

[Close]

BLAST of Lcy05g012190 vs. ExPASy TrEMBL
Match: A0A6J1I9R8 (uncharacterized protein LOC111470946 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111470946 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 1.2e-93
Identity = 180/255 (70.59%), Postives = 207/255 (81.18%), Query Frame = 0


Query: 4   HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVH 63
           H PSS+SPPVADR+   + SAS LTRLNSESYSSS T+D  +     +P+H C +LDAV 
Sbjct: 5   HTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQ 64

Query: 64  THWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNISTSELMVLQDASW 123
           THWTDEKHR +LD+LEASFVQ+LH+YRHL A SSKQKMRRKPIM NIS+SE MVLQDASW
Sbjct: 65  THWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMRRKPIMPNISSSESMVLQDASW 124

Query: 124 QKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNT 183
           QKANIG  DPLL +TADSPAILEDVWINHFPSAG Q   ++ D+LEECG+CSDR H+RN 
Sbjct: 125 QKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQRTPETTDVLEECGSCSDRSHIRNK 184

Query: 184 KSSCGSARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSD 243
            +SC SARSSQQIPPCCRDS+ ++ EVSDQNFVD H GELS G  I KRLKK +SDSL +
Sbjct: 185 TNSCQSARSSQQIPPCCRDSHTIVAEVSDQNFVDTHPGELSGGTPITKRLKKASSDSLGN 244

Query: 244 NQVVSYKNKRLSSER 255
           ++V  Y  KRLSSER
Sbjct: 245 DRVAPY--KRLSSER 257

[Close]

BLAST of Lcy05g012190 vs. ExPASy TrEMBL
Match: A0A1S3BZU8 (uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495241 PE=4 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 3.4e-93
Identity = 182/250 (72.80%), Postives = 208/250 (83.20%), Query Frame = 0


Query: 1   MGD-HLPSSVSPPVADRQP--PSAASASYLTRLNSESYSSSITLDGFKD-LPAHRCLELD 60
           MGD H PS VS P+ADRQ   P A+S +  T  NSES+SSSIT+DG K  L +H CL+LD
Sbjct: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60

Query: 61  AVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNISTSELMVLQD 120
           A  THWTDEKHRSYLDSLEASFVQ LHQ+R +HALSSKQKMRRKPIM + S+SELMVLQD
Sbjct: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120

Query: 121 ASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHL 180
           ASWQKANIG NDPLLD+TADSPAILED+WINHFPSAGKQC+L++PDLLEECG+CSDRRH+
Sbjct: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180

Query: 181 RNTKSSCGSARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDS 240
           R+  +SCGSAR+SQQ  PCC +SY +ITEVSDQNFVDN  GELS GM  AKRLKK +S  
Sbjct: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASSGF 240

Query: 241 LSDNQVVSYK 247
           L + QVV +K
Sbjct: 241 LDNAQVVPFK 250

[Close]

BLAST of Lcy05g012190 vs. ExPASy TrEMBL
Match: A0A5D3C4A3 (Cold regulated protein 27, putative isoform 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00540 PE=4 SV=1)

HSP 1 Score: 345.5 bits (885), Expect = 1.9e-91
Identity = 179/245 (73.06%), Postives = 204/245 (83.27%), Query Frame = 0


Query: 1   MGD-HLPSSVSPPVADRQP--PSAASASYLTRLNSESYSSSITLDGFKD-LPAHRCLELD 60
           MGD H PS VS P+ADRQ   P A+S +  T  NSES+SSSIT+DG K  L +H CL+LD
Sbjct: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSKRFLDSHHCLQLD 60

Query: 61  AVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNISTSELMVLQD 120
           A  THWTDEKHRSYLDSLEASFVQ LHQ+R +HALSSKQKMRRKPIM + S+SELMVLQD
Sbjct: 61  AEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSELMVLQD 120

Query: 121 ASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHL 180
           ASWQKANIG NDPLLD+TADSPAILED+WINHFPSAGKQC+L++PDLLEECG+CSDRRH+
Sbjct: 121 ASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGKQCSLETPDLLEECGSCSDRRHI 180

Query: 181 RNTKSSCGSARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDS 240
           R+  +SCGSAR+SQQ  PCC +SY +ITEVSDQNFVDN  GELS GM  AKRLKK +S  
Sbjct: 181 RHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDNQPGELSGGMPTAKRLKKASSGF 240

Query: 241 LSDNQ 242
           L + Q
Sbjct: 241 LDNAQ 245

[Close]

BLAST of Lcy05g012190 vs. NCBI nr
Match: XP_023529516.1 (uncharacterized protein LOC111792349 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 375.6 bits (963), Expect = 3.5e-100
Identity = 192/256 (75.00%), Postives = 216/256 (84.38%), Query Frame = 0


Query: 1   MGDHL------PSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKDLPAHRCLE 60
           MGDHL      PSS+SPPV DRQPPS +SAS LT LNS+SYSSS+T+D FKD P+HRCL+
Sbjct: 1   MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQ 60

Query: 61  LDAVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNISTSELMVL 120
           LDAV THWTDEKHRSYL SLEASFVQELHQYR L ALSSKQKMR +P M +IS+SELMVL
Sbjct: 61  LDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRPSMPHISSSELMVL 120

Query: 121 QDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRR 180
           QDASWQKANIG NDPLL+R AD PAIL+DVWIN FPSAGKQC  ++PDLLEE G+ SDRR
Sbjct: 121 QDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRR 180

Query: 181 HLRNTKSSCGSARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTS 240
           HLRNTK+S  SARSSQQ+PPCCR+SY +ITEVSDQNFVDNH GE+S GM  AKRLKK +S
Sbjct: 181 HLRNTKNSYRSARSSQQVPPCCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASS 240

Query: 241 DSLSDNQVVSYKNKRL 251
           DS +++QVV YK   L
Sbjct: 241 DSSANDQVVPYKRPSL 256

[Close]

BLAST of Lcy05g012190 vs. NCBI nr
Match: KAG7022450.1 (hypothetical protein SDJN02_16181, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-98
Identity = 191/256 (74.61%), Postives = 213/256 (83.20%), Query Frame = 0


Query: 1   MGDHL------PSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKDLPAHRCLE 60
           MGDHL      PSS+SPPV DRQPPS +SAS LT LNS+SYSSS T+D FKD P+HRCL+
Sbjct: 1   MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSFTVDRFKDFPSHRCLQ 60

Query: 61  LDAVHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNISTSELMVL 120
           LDAV THWTDEKHRSYL SLEASFVQELHQYR L ALSSKQKMR +P M +IS+SELMVL
Sbjct: 61  LDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRPSMPHISSSELMVL 120

Query: 121 QDASWQKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRR 180
           QDASWQKANIG NDPLL+R ADSPAIL+DVWIN FPSAGK C  ++PDLLEE G+ SD R
Sbjct: 121 QDASWQKANIGRNDPLLERIADSPAILDDVWINRFPSAGKPCTSETPDLLEESGSFSDGR 180

Query: 181 HLRNTKSSCGSARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTS 240
           HLRNTK+S  SARSSQQIPPCCR+SY +ITEVSDQNFVDN  GE+S GM  AKRLKK +S
Sbjct: 181 HLRNTKNSYQSARSSQQIPPCCRESYTIITEVSDQNFVDNRPGEVSGGMPTAKRLKKASS 240

Query: 241 DSLSDNQVVSYKNKRL 251
           DS +++QVV YK   L
Sbjct: 241 DSSANDQVVPYKRPSL 256

[Close]

BLAST of Lcy05g012190 vs. NCBI nr
Match: XP_022952081.1 (uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata])

HSP 1 Score: 366.3 bits (939), Expect = 2.1e-97
Identity = 185/255 (72.55%), Postives = 212/255 (83.14%), Query Frame = 0


Query: 4   HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVH 63
           H PSS+SPPVADR+ P + SAS LTRLNSESYSSS T+D  +     +P+H C +LDAV 
Sbjct: 5   HTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQ 64

Query: 64  THWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNISTSELMVLQDASW 123
           THWT+EKHR +LDSLEASFVQ+LH+YRHL ALSSKQKMRRKPIM NIS+SE MVLQDASW
Sbjct: 65  THWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMVLQDASW 124

Query: 124 QKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNT 183
           QKAN+G  DPLLD+TADSPAILEDVWINHFPSAG QC L++ D+LEECG+CSDR H+RN 
Sbjct: 125 QKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNK 184

Query: 184 KSSCGSARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSD 243
            +S  SARSSQQIPPCCRDS+ ++TEVSDQNFVD H GELSDG  I KRLKK +SDS  +
Sbjct: 185 TNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGN 244

Query: 244 NQVVSYKNKRLSSER 255
           N+V  Y  KRLSSER
Sbjct: 245 NRVAPY--KRLSSER 257

[Close]

BLAST of Lcy05g012190 vs. NCBI nr
Match: XP_022952080.1 (uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata])

HSP 1 Score: 357.8 bits (917), Expect = 7.5e-95
Identity = 177/243 (72.84%), Postives = 204/243 (83.95%), Query Frame = 0


Query: 4   HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVH 63
           H PSS+SPPVADR+ P + SAS LTRLNSESYSSS T+D  +     +P+H C +LDAV 
Sbjct: 5   HTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQ 64

Query: 64  THWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNISTSELMVLQDASW 123
           THWT+EKHR +LDSLEASFVQ+LH+YRHL ALSSKQKMRRKPIM NIS+SE MVLQDASW
Sbjct: 65  THWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSESMVLQDASW 124

Query: 124 QKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNT 183
           QKAN+G  DPLLD+TADSPAILEDVWINHFPSAG QC L++ D+LEECG+CSDR H+RN 
Sbjct: 125 QKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNK 184

Query: 184 KSSCGSARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSD 243
            +S  SARSSQQIPPCCRDS+ ++TEVSDQNFVD H GELSDG  I KRLKK +SDS  +
Sbjct: 185 TNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGN 244

[Close]

BLAST of Lcy05g012190 vs. NCBI nr
Match: XP_023553839.1 (uncharacterized protein LOC111811294 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357.8 bits (917), Expect = 7.5e-95
Identity = 182/255 (71.37%), Postives = 209/255 (81.96%), Query Frame = 0


Query: 4   HLPSSVSPPVADRQPPSAASASYLTRLNSESYSSSITLDGFKD----LPAHRCLELDAVH 63
           H PSS+SPPVADR+ P + SAS LTRLNSESYSSS T+D  +     +P+H C +LDAV 
Sbjct: 5   HTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQ 64

Query: 64  THWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMRRKPIMHNISTSELMVLQDASW 123
           THWTDEKHR +LDSLEASFVQ+LH+YRHL A SSKQK+RRK IM NIS+SE +VLQDASW
Sbjct: 65  THWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSESLVLQDASW 124

Query: 124 QKANIGMNDPLLDRTADSPAILEDVWINHFPSAGKQCALDSPDLLEECGTCSDRRHLRNT 183
           QKANIG  DPLL +TADSPAILEDVWINHFPSAGK C L++ D+LEECG+CSDRRH+RN 
Sbjct: 125 QKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNK 184

Query: 184 KSSCGSARSSQQIPPCCRDSYAVITEVSDQNFVDNHSGELSDGMFIAKRLKKTTSDSLSD 243
            +SC SARSSQQIP CCRDS+ + TEVSDQNFVD H GELSDG  I KRLKK +SDS  +
Sbjct: 185 TNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGN 244

Query: 244 NQVVSYKNKRLSSER 255
           ++V  Y  KRLSSER
Sbjct: 245 DRVAPY--KRLSSER 257

[Close]

BLAST of Lcy05g012190 vs. TAIR 10
Match: AT5G42900.3 (cold regulated gene 27 )

HSP 1 Score: 63.9 bits (154), Expect = 2.1e-10
Identity = 64/200 (32.00%), Postives = 94/200 (47.00%), Query Frame = 0


Query: 58  VHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMR--------RKPIMHNISTS 117
           + T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  
Sbjct: 44  METEWTNEKHSLYLKSMEASFVDQL--YNSLGALGKNENVSESTRFGSGRKP-----SQE 103

Query: 118 ELMVLQDASWQKANIGMNDPLLD--RTADSPAILEDVWINHF-PSAGKQCALDSPDLLEE 177
           +  VL D  WQK N+   +  ++     +S   L   WI H+ P    Q  +      + 
Sbjct: 104 QFKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQV 163

Query: 178 CGTCSDRRHLRNTKSSCGSARSSQQIPPCCR--DSYAVITEVSDQNFVDNHSGELSDGMF 237
             + + ++ +     S GSA S +Q+    R  D  +V  EVSDQNFV N   +  +G  
Sbjct: 164 VSSSNGKKGI----CSSGSASSLKQLSSHSRDHDQISVGEEVSDQNFV-NEGIKGENGS- 223

Query: 238 IAKRLKKT-TSDSLSDNQVV 244
            +K++K    S+S S +QVV
Sbjct: 224 -SKKMKTVMMSESSSTDQVV 229

[Close]

BLAST of Lcy05g012190 vs. TAIR 10
Match: AT5G42900.1 (cold regulated gene 27 )

HSP 1 Score: 62.4 bits (150), Expect = 6.1e-10
Identity = 63/201 (31.34%), Postives = 93/201 (46.27%), Query Frame = 0


Query: 58  VHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMR--------RKPIMHNISTS 117
           + T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  
Sbjct: 44  METEWTNEKHSLYLKSMEASFVDQL--YNSLGALGKNENVSESTRFGSGRKP-----SQE 103

Query: 118 ELMVLQDASWQKANIGMNDPLLD--RTADSPAILEDVWINHF-PSAGKQCALDSPDLLEE 177
           +  VL D  WQK N+   +  ++     +S   L   WI H+ P    Q  +      + 
Sbjct: 104 QFKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQV 163

Query: 178 CGTCSDRRHLRNTKSSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVDNHSGELSDGM 237
             + + ++ +     S GSA S +Q+    RD   +     EVSDQNFV N   +  +G 
Sbjct: 164 VSSSNGKKGI----CSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFV-NEGIKGENGS 223

Query: 238 FIAKRLKKT-TSDSLSDNQVV 244
             +K++K    S+S S +QVV
Sbjct: 224 --SKKMKTVMMSESSSTDQVV 230

[Close]

BLAST of Lcy05g012190 vs. TAIR 10
Match: AT5G42900.2 (cold regulated gene 27 )

HSP 1 Score: 62.4 bits (150), Expect = 6.1e-10
Identity = 63/201 (31.34%), Postives = 93/201 (46.27%), Query Frame = 0


Query: 58  VHTHWTDEKHRSYLDSLEASFVQELHQYRHLHALSSKQKMR--------RKPIMHNISTS 117
           + T WT+EKH  YL S+EASFV +L  Y  L AL   + +         RKP     S  
Sbjct: 44  METEWTNEKHSLYLKSMEASFVDQL--YNSLGALGKNENVSESTRFGSGRKP-----SQE 103

Query: 118 ELMVLQDASWQKANIGMNDPLLD--RTADSPAILEDVWINHF-PSAGKQCALDSPDLLEE 177
           +  VL D  WQK N+   +  ++     +S   L   WI H+ P    Q  +      + 
Sbjct: 104 QFKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQIPVTDEPENQV 163

Query: 178 CGTCSDRRHLRNTKSSCGSARSSQQIPPCCRDSYAVI---TEVSDQNFVDNHSGELSDGM 237
             + + ++ +     S GSA S +Q+    RD   +     EVSDQNFV N   +  +G 
Sbjct: 164 VSSSNGKKGI----CSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFV-NEGIKGENGS 223

Query: 238 FIAKRLKKT-TSDSLSDNQVV 244
             +K++K    S+S S +QVV
Sbjct: 224 --SKKMKTVMMSESSSTDQVV 230

[Close]

BLAST of Lcy05g012190 vs. TAIR 10
Match: AT4G33980.1 (BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 52.0 bits (123), Expect = 8.2e-07
Identity = 38/124 (30.65%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 15  DRQPPSAASASYLTRLNSESYSSSITLDGFKDLPAHRCLELDAVHTHWTDEKHRSYLDSL 74
           DR    A++ S      S S  S +T +  +     +  E     T WT+EKH SYLD L
Sbjct: 15  DRDVSEASAESQSESTLSNSLDSGVTAETSRSDADSKLDEC----TAWTNEKHNSYLDYL 74

Query: 75  EASFVQELHQYRHLHALSSKQKMRRKPIMHNI--STSELMVLQDASWQKANIGMNDPLLD 134
           E+SFV++L+    L    +++  R + +  N   S  +  VLQ+  WQK N G     L+
Sbjct: 75  ESSFVRQLYS---LLGGGTQRLSRTRDVQSNSHKSADQFTVLQNGCWQKVNFGKKQSCLE 131

Query: 135 RTAD 137
            +++
Sbjct: 135 TSSE 131

[Close]

BLAST of Lcy05g012190 vs. TAIR 10
Match: AT4G33980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.3). )

HSP 1 Score: 52.0 bits (123), Expect = 8.2e-07
Identity = 38/124 (30.65%), Postives = 60/124 (48.39%), Query Frame = 0


Query: 15  DRQPPSAASASYLTRLNSESYSSSITLDGFKDLPAHRCLELDAVHTHWTDEKHRSYLDSL 74
           DR    A++ S      S S  S +T +  +     +  E     T WT+EKH SYLD L
Sbjct: 15  DRDVSEASAESQSESTLSNSLDSGVTAETSRSDADSKLDEC----TAWTNEKHNSYLDYL 74

Query: 75  EASFVQELHQYRHLHALSSKQKMRRKPIMHNI--STSELMVLQDASWQKANIGMNDPLLD 134
           E+SFV++L+    L    +++  R + +  N   S  +  VLQ+  WQK N G     L+
Sbjct: 75  ESSFVRQLYS---LLGGGTQRLSRTRDVQSNSHKSADQFTVLQNGCWQKVNFGKKQSCLE 131

Query: 135 RTAD 137
            +++
Sbjct: 135 TSSE 131

The following BLAST results are available for this feature:

BLAST of Lcy05g012190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L8T7	8.6e-09	31.34	Cold-regulated protein 27 OS=Arabidopsis thaliana OX=3702 GN=COR27 PE=1 SV=1	[more]
Q8L983	1.2e-05	30.65	Cold-regulated protein 28 OS=Arabidopsis thaliana OX=3702 GN=COR28 PE=1 SV=1	[more]

BLAST of Lcy05g012190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GJA3	1.0e-97	72.55	uncharacterized protein LOC111454842 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GKR5	3.6e-95	72.84	uncharacterized protein LOC111454842 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1I9R8	1.2e-93	70.59	uncharacterized protein LOC111470946 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A1S3BZU8	3.4e-93	72.80	uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A5D3C4A3	1.9e-91	73.06	Cold regulated protein 27, putative isoform 2 OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of Lcy05g012190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529516.1	3.5e-100	75.00	uncharacterized protein LOC111792349 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
KAG7022450.1	1.1e-98	74.61	hypothetical protein SDJN02_16181, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022952081.1	2.1e-97	72.55	uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]	[more]
XP_022952080.1	7.5e-95	72.84	uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]	[more]
XP_023553839.1	7.5e-95	71.37	uncharacterized protein LOC111811294 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lcy05g012190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42900.3	2.1e-10	32.00	cold regulated gene 27	[more]
AT5G42900.1	6.1e-10	31.34	cold regulated gene 27	[more]
AT5G42900.2	6.1e-10	31.34	cold regulated gene 27	[more]
AT4G33980.1	8.2e-07	30.65	BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G429...	[more]
AT4G33980.2	8.2e-07	30.65	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; LOC...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR33676:SF17	REGULATED GENE 27, PUTATIVE ISOFORM 2-RELATED	coord: 16..248
IPR044678	Cold-regulated protein 27/28	PANTHER	PTHR33676	COLD REGULATED PROTEIN 27	coord: 16..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy05g012190.1	Lcy05g012190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042752	regulation of circadian rhythm
biological_process	GO:0009409	response to cold