Lcy05g011230 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g011230
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr05: 12812724 .. 12815611 (+)
RNA-Seq ExpressionLcy05g011230
SyntenyLcy05g011230
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCACAAATTCGCAATCAAGCAGACGAAATCCAAGTCGGTGCCTCTCGCCGCCGGCCGATTCGCCACCGCCGGCAATGTTACTGTCGTCGCGCAGCCGCAGAAGCCGCCTCCACCTCCGCCGCCTCCGCAGCTTCTTCGCCAGAATCGTGATTGGGACGATGACGATGTGAGTGCTTATGAACCAATCTCTTTTTATTTGTTGTGTTTGTTAATAAGTTGGAATATATTTAATTTCACTTTTTTTTTTCCCCCGGTTTATTCATTGTTTTGTTTTTGTTTTTAGTTCGGTCTATTCATTGATTTAATATTATTTTGTTGATATTGAGATTCTTATATTGAATGATTTATTATGCAAGTTTGTGCTTTGAAGTTAGAATTTTTAGATTTTAAATTTAGTGATGATTTGAGATTGTGTTATTGTAGAGAATTTTGAAGTTTGAATGTTGTAATGTTTTTTTTTTTTTTTTTTAGTCTTCCAAGTTAAAACAATGTTTGTAGAGAATTTAGTCATCGATATTTTTTTTACTTCCACTGTTATGATAGTAGAGATTTTTAGTTCAACTATATTCCAAAGGTTGATGGTTCGATTCTCACTCCACAAATTTGAACTACAAAAGAATAATAGAGATTTTGACTTCCACGTTTTTTTTTTTGACCTATAAACTTTAGGAAGTTAAGTAATATGTTATTGACCTTCCGACCGGGAGGGATTTTTTTTTTTTTTTAATCTTTGAACCCAATACGAATATAGATTAAAATTGCTTTAATTATGTTTTTTGTTTTGTTTTGTTTTTTTTTTTTTATCTTTTAATGAACACAAGGGTTTTTCTAAATAATTATATTTTCTAAACATAAATAACTCTATTTTTTCTAGTTTATAGATTTTTATGGCATTTGAAAAACATTTTCTAAAATAAGAATACTAATGTTTGATAATGGTTTTATTTAAAAAAGTTGTTTAGAAATTATTTTAACTTTTCTCCCCGTTTCTTTTTAACGCGAATTATTTTTTCAAAGATGCCTTTAATTTTAAGACAAATTTTAAAATCGAGAAAAGACTTTCGATTTATTTTTTATTTTTTTTTGAAAGTAGACTACAACGATTCAATTTGATAATATTTTTATTTTTTAATAGAAAATTAATTATTTTATTTTGAAAATCAAGTTGGTTTGTACAAATTTAACTGTTTTGTTTTTTCACGTTATTTTTTATTTATTTATTTTGAAGCTGACATTAAAAAATGAAAAAGATATACGGACACTATATATATATATATAGCTTCTCAATTTGTTTAATTTTTTTAAAAAAGCATATTTCATTTTTATTTACTTTTAAAATTTCAAACATATTCTATAGCTATACTTTTCTTTTCTTTTTCTTTTTTTTTGAAAAAAATTCTATAGCTATACTTTAGACTTTATTTACTCCATCAATTTTATTTAAATTAAAGTAATAATCACACTCTAGAATTAAAATAAATCACACTAAATCACAAAGAAAATTTTGAAATCCTAATAAAATTTTAGAAAAACAAAAAAAAACCTACATTTCGTTCTCAATTTGTCTAAGGTTTCAAAAACGAAAAAAATCTGAAACAAAAACCTACACTAAAAAAATTGTAATATTTTATTAAAAATAACACATCCCAAATGCAAGATTATTTTTGAAATAATACCGAAAATTTGGTTAAAATACAAGTGTAGTTACTGAATTTTCATATATGTGTTTAGTAAGCCTCTGAATTTTAAAAATGTCTAAATAGATCATCAAACTTTCAATTTTGTGTCTAATAGATTTCTTATTTTTATTTGAAAATTTTAGAAAATAACAATAATATTATATATTTCTTAAGTTCAAAACACGTTGGAGCGTGGATTCGAACCTCTAACTGTTTAATCGAAGATAGTATACTTCAGTAGTTGAATTATGTTTAGGTTGGCAAAATATCTACTAGAAAAATAGGAAATTAAAAATCAAAAGCATATTCTGATTTTAAATTCGTAGAGAATCGGGTCGGGTCAACAGTGGATCCGAGTTCAATTTCATCGACGGCCCAACAAGGGCCCTACAAATCGACGGCCCACGAAAGCCCTAGCTGAGGCCATGCACTCTCTCTTCCGTCTTCCCCGTAGAAAATTTTTTTTCTTGTTATTCTCCTCAACGCCAGCAGGTTCGATCTTCCCCCCAGTCTTCTTCGTCGTCTTCCTCCTCCCACCAAGCTTCTTCACTCAAATGCAATTTCCACCAATTGAATCTCTCTACAACACCCACCATCGGTACCTTCTTCACTCTCCTCCTCTCCCCTTTTCTTCCCATGTTTCAATTCTTCCTCTTTTTCTTTCACCTCTGAGAATGCTTGCTCTTTGCTGAAAATTTTGATCAGAGTGTCTTGATTGTTGACGCCTGCGATATCTTTCGTTCTGGGGCAGCACCAGGCGAGAGCGTGGCCAAACGAGCTGAGGTTTGTTTCTATAACATGCAATGCAATTACTTAATGTCTGCCTTTTTTGGTTGCTCTTATCTTGTGCATAAGTCAGGCCCGGTGCTTGGTTTCGATGTTTTTCACTCATAATTAGATTCTTCTCCCTGGAATATATGTTTTTCATAGCGAGAGAGTGACAAGACGTTTGCCATTTAGGAGGTGATCATACAAGGCCATGAGAATTATTAAGGAAGTAATGTAGTTTTCACCTTACGTATTTGTGCGGAATGTGTCATATACAGATGCATATAATTACATTTGGGCATATTTCTTTTCTAGAGGGGATACTACTGTTGTATTTCAATTCAATGATCATGTCTACAACTTTACCTCTGATAACCATTGTCTTTACAATAAGATTGACCAAACCATGGTTAGGAATGCGGGTTTTGTGAAATAA

mRNA sequence

ATGGATCACAAATTCGCAATCAAGCAGACGAAATCCAAGTCGGTGCCTCTCGCCGCCGGCCGATTCGCCACCGCCGGCAATGTTACTGTCGTCGCGCAGCCGCAGAAGCCGCCTCCACCTCCGCCGCCTCCGCAGCTTCTTCGCCAGAATCGTGATTGGGACGATGACGATAGTGTCTTGATTGTTGACGCCTGCGATATCTTTCGTTCTGGGGCAGCACCAGGCGAGAGCGTGGCCAAACGAGCTGAGATTGACCAAACCATGGTTAGGAATGCGGGTTTTGTGAAATAA

Coding sequence (CDS)

ATGGATCACAAATTCGCAATCAAGCAGACGAAATCCAAGTCGGTGCCTCTCGCCGCCGGCCGATTCGCCACCGCCGGCAATGTTACTGTCGTCGCGCAGCCGCAGAAGCCGCCTCCACCTCCGCCGCCTCCGCAGCTTCTTCGCCAGAATCGTGATTGGGACGATGACGATAGTGTCTTGATTGTTGACGCCTGCGATATCTTTCGTTCTGGGGCAGCACCAGGCGAGAGCGTGGCCAAACGAGCTGAGATTGACCAAACCATGGTTAGGAATGCGGGTTTTGTGAAATAA

Protein sequence

MDHKFAIKQTKSKSVPLAAGRFATAGNVTVVAQPQKPPPPPPPPQLLRQNRDWDDDDSVLIVDACDIFRSGAAPGESVAKRAEIDQTMVRNAGFVK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..47

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g011230.1Lcy05g011230.1mRNA