Lcy05g004210 (gene) Sponge gourd (P93075) v1

Overview
NameLcy05g004210
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionUnknown protein
LocationChr05: 3762777 .. 3764337 (+)
RNA-Seq ExpressionLcy05g004210
SyntenyLcy05g004210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCACTTCTCACACACTGGACCTGACCATATCGAGTCTTCCAGACTAAGCGGTCAACGGTGATTTTTTTACTCTCAACAATTGATCTATTTTTTCAACTAAAATGTAAGAAGTTTGGATATTCCCATCTAAAATTTTGTTGAATAAATAAAAGGCTTGTTTGTTTGTATAGATTTATTTAGAATGTAAAATTTTAAAAGGAAGACTCACCTTCAATCTTTTATTTCTCTCAGTCAAACTCTTTTTTCTTTGTGCTCTTGATATTTCCAATTTTGATATTCTTGATATAATAATATTTGTAATAGTCACTCAGAGCATAATCGATAGCTCGACTGATTAACATATACACTCTCAATCAATATATAATTTCAAATCATGTTTTAAAAAAATGTAATCACCTAATTTGAAATACTATAAATTAGAGTAATTTCTTTAAAGTTTTAGTTTGAAGAGAGAAATATTTGATGTGGATGTTGTTTGTTACTGTTACGATGAGGTTATAATACCATTTTGATCAATGTACTTTAGTTTTGTTCCATTTTAGTCTTTGTAATTTCAATAAAGCTTAAAATTGCTAAGTTATCTTTTTACGATAAATAAGAATAATAATTTTCATACAAGAAAAAACACAATATGAAAATATTTCATATAATTTATAGAAGAAAGGTTAATAGATACCATTTTTATAGAAAAAATAACAAAATTGGATATTTAAAAGTACATGGATTAAAATAAATCAAAATCCAAAGTACACGACCTTGATGATATTTAATTTAAAACAAAATGGCCCTAATGATATTTTAACCTCAAGTCATACTTTTTGGAACTGCAAGCATGGATTCGATATGGGACTCAATAACAGACGGAATGAATATCAAGGATATTGAAAAAGTAACGATCATGTTATGGTCAATATGGAACTTCAGAAACAAGATAAATTCTAGCAATGAGAGAGCAAATTTCCACCAGCTATCAAGAACAAGCAAGAGGAACTTAGAAGAGCAAAGAAAGCGTCATGACTCAGACCTGGAGTCTATCAACTCGGAGAGTCTGCGGAATCAGGATAAGTGGACCCCCCTTGCCAAATTGCCTGAAGTTGAATACATATGCTTCATGGAATGTGGATCGGGCGTGTGGTGGAATCGGTTGGATTCTCCGTGATTCTACAGGGTCTCCAAGGGGCTTCGACTACAAGAAGATCAATGGGTAATGGTCTATCAAATCCCTGGAGATGTTAGCAATTAAAGAAGGAATCAAAGCTTGTCTGTCATCTAATCGGGTTGGAGTTACTCCAATGGTGGTGGAGGCTGATGCTTTAGAAGTAATCAAATCCCTGAACTATGAAAGTGAAGATATATCAGACACGAAATTGGTGTTGAATGAAGTTGAATCCTTGGTAGCTAATGTTGGGGTAATCACGTTCGTAAAATGCCCAAGGGCAGGAAATAAAATCGCACACTCCCTCACGCAAATGGCAGCGGGATTCGCTCCGACGTCTTCCCCTTCGATTGAAGCTATCAGGGGGCATTTTGATATTTCTAGTTTTTGTGATTCTTCC

mRNA sequence

ATGGGCCACTTCTCACACACTGGACCTGACCATATCGAGTCTTCCAGACTAAGCGGTCAACGAAACAAGATAAATTCTAGCAATGAGAGAGCAAATTTCCACCAGCTATCAAGAACAAGCAAGAGGAACTTAGAAGAGCAAAGAAAGCGTCATGACTCAGACCTGGAGTCTATCAACTCGGAGAGTCTGCGGAATCAGGATAAGTGGACCCCCCTTGCCAAATTGCCTGAAGTTGAATACATATGCTTCATGGAATGTGGATCGGGCGTGTGGTGGAATCGGTTGGATTCTCCGTGATTCTACAGGGTCTCCAAGGGGCTTCGACTACAAGAAGATCAATGGGTAATGGTCTATCAAATCCCTGGAGATGTTAGCAATTAAAGAAGGAATCAAAGCTTGTCTGTCATCTAATCGGGTTGGAGTTACTCCAATGGTGGTGGAGGCTGATGCTTTAGAAGTAATCAAATCCCTGAACTATGAAAGTGAAGATATATCAGACACGAAATTGGTGTTGAATGAAGTTGAATCCTTGGTAGCTAATGTTGGGGTAATCACGTTCGTAAAATGCCCAAGGGCAGGAAATAAAATCGCACACTCCCTCACGCAAATGGCAGCGGGATTCGCTCCGACGTCTTCCCCTTCGATTGAAGCTATCAGGGGGCATTTTGATATTTCTAGTTTTTGTGATTCTTCC

Coding sequence (CDS)

ATGGGCCACTTCTCACACACTGGACCTGACCATATCGAGTCTTCCAGACTAAGCGGTCAACGAAACAAGATAAATTCTAGCAATGAGAGAGCAAATTTCCACCAGCTATCAAGAACAAGCAAGAGGAACTTAGAAGAGCAAAGAAAGCGTCATGACTCAGACCTGGAGTCTATCAACTCGGAGAGTCTGCGGAATCAGGATAAGTGGACCCCCCTTGCCAAATTGCCTGAAGTTGAATACATATGCTTCATGGAATGTGGATCGGGCGTGTGGTGGAATCGGTTGGATTCTCCGTGA

Protein sequence

MGHFSHTGPDHIESSRLSGQRNKINSSNERANFHQLSRTSKRNLEEQRKRHDSDLESINSESLRNQDKWTPLAKLPEVEYICFMECGSGVWWNRLDSP
Homology
The following BLAST results are available for this feature:
BLAST of Lcy05g004210 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy05g004210 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy05g004210 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy05g004210 vs.
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..34
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..66
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..58

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy05g004210.1Lcy05g004210.1mRNA