Lcy04g018930 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g018930
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	DUF295 domain-containing protein
Location	Chr04: 50747288 .. 50749730 (-)
RNA-Seq Expression	Lcy04g018930
Synteny	Lcy04g018930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGTTGGGTTTCGTTATCTAAGGATCATTAGAAACAGTGTTGTGCAGGAAGAAGTTATCTACTGGAACTCTATTAGCAGTCGAGCCTCGAATGTTTCTGGACTGCATTGGTAGATTGATGAGCAAAATACTTGTACTGAAGAATTACTTGGGGATTACTGATGACTGATAATGTGTGGGCTGGCTTTGAGAAGGAGAATTTCATACCATTCCTGGTTGTTCTTGTCCATCTCAAATGGGAAACATTACCAGTCTGAATCTGGGAAAAATTTTGGCCAGGAACAAAGGAAGATTGCAAATTGTTTGAGTGAACTCTTCAGAAATTAAAGGAGACAGATTGGGTGTTTCTGTTTGATCCATTTAGGCAAGGGGGTTTGATCATGGGGCTGTGCGTTTGTTCTTCAATGGAAGAGAGAGAGATTTGGTTGAAAACTTGATGTTTCGATGTGTTTTTGGCCAAAATTAAGGTAGATGATGTTTTTGTAAGTAAAGCAGAAGGAATCCCAAGTCCGGTTTTCTAAGAATGGAAATTAATGTCTACGAATGAGTTGAATTGAGTATAAATTTGAATCATCTAGCAAAGAGATTAGACATTTGCCAAAACAAGCATAGGTCATGGTCAACGGTAATTGGTATATATCCTAACCCTCAATGGTTGTTGAACTACAAAAAAAAAAAAAAAAATTTGTAAGTTATATTTATCACTATTTTCATATATATATATATATATATATATTTATATTTCTAGATGCAAGATAAGATTAGATAATATCTAATTCCATTTTTAATTTACTAATTCATTTTAGATTTTTTACCCTTTCTCAATAAGATTACACAATATCCAATTATTTTATTTATTTATTTATTTATTTTTGAGTTCTTAATTTCCAATTCTATTATTAGATGCAAGATAAGATCACACACGTATATATAAGAAAAAAAAAATCATTTGGAAAAAGAAATGAAAAGAAATCGTGCACTTAATTCAAAACCAAATTATTTAAAGATAAAAAAAATTCAAAACCAAATTTGACCAAATCAAAGGCATGGAAAGTGAAACTAAAACAACAATATATAAAATATAACTAAAAAAACTCAAAATCATAAATATTTACCGATTTAGGATGCTTTCTTTGTTTTAAATTGGTGGTTCTCTCATCTTCTCCAGTGCCGCGAAACAGGTTCTTCTCCTCCGATGGACAAAAGCTCTGTACAGTGGTCCGATCTCCCTCCTGAACTTTGGACGGTCGTCACAAAGCACCTCCATACCTACATCGACGTCCTCCGGTGTCGCGCCGTCTGTCGATCATGGCGTGCTTCTCTTCCTCCGTTCAACGCCTTTTCTCCTCTTCTACCTCTCCACGTCCCTTGCCCTCCCAACGACGACGCCCATTACCGAATCAAAGACACTGTACTCATCCGAAAGATAATCTATCGCCTCAGTCCCCTTCAGGATCATCAAACTCCTAACTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATCGGGCGAAGGGCTGGTTTGCGATGGTGCGGATTGTAAAGAAAGGTAAATTGCGATTTCTGCGTCCGCTTTATCGGTCTTATCTTAGAAACACCTACGATTCCCTTCGTAAGCAAGTGAACTTGCACGATTTTCGAATTCACGAAGTGGCTAAATTGTATGAGCTTGTAGATACCAATGGCATTTTTGTTTCTGGAATAAAAAAGGTCGTAATGTTCCCCGATTCTCCCAGGATCGACGCGAACAACTGCACCGTTTTAGCAATGTACGAAGACGGAAAATTAGGGTTTGCTAAAGTTAGGGATCATGAATGGACGCTGATTCGCAAACCAAATTTTAACTGCGGCGATGTGATTGCGTGCAGGGGACATTTCTATGTAGTTGATAGAAGGGCAAAAGTTTTCCGGATGGATTCATCGACGATGGAATTGGTTCAGATTTCTCCTCGAATGCGTGGTTCTGGTAAACAGAAACATCTGGTGGAATGCGAGGGCGAAGTTTATGTGGTCGATCAATTTGATAAAAACAGTGAAGTTCCTGAGGATTCCGATAAACTATCAAGAGTTGATTTCAAAGTGTACAGGGTTTGTTTGGATGGAACTGGAAGATTGGAGGAGGTGAAGAATTTGGGGAAGAAAGCGTTTGTTTTGGGGGCGGAGGGCAGTTTCTCAGTTTCAGAAAGAGATTTTGAAGGAATTAAAGGGAATTGCATATATTATCCTCGAGCATTGAGTGGCGTGATGAGCTCTATTGTTCATGTATTCGATGTTGAGGAAAGGATTTTGAAATGTGATAATGATGAAGAGATTTTCAGGCTACCGCTGATGTTGCTCGATCACAACGCCTCTCATGGATATGGTATCACTCACAATCTGGCTGTTTCTTGTACAGGTTTGCCATTTGGAAATCTCAAGCCTCGCGTGGATACATAA

mRNA sequence

ATGTCTGTTGGGTTTCGTTATCTAAGGATCATTAGAAACAGTGTTGTGCAGGAAGAAGTTATCTACTGGAACTCTATTAGCAGTCGAGCCTCGAATGATCATCAAACTCCTAACTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATCGGGCGAAGGGCTGGTTTGCGATGGTGCGGATTGTAAAGAAAGGTAAATTGCGATTTCTGCGTCCGCTTTATCGGTCTTATCTTAGAAACACCTACGATTCCCTTCGTAAGCAAGTGAACTTGCACGATTTTCGAATTCACGAAGTGGCTAAATTGTATGAGCTTGTAGATACCAATGGCATTTTTGTTTCTGGAATAAAAAAGGTCGTAATGTTCCCCGATTCTCCCAGGATCGACGCGAACAACTGCACCGTTTTAGCAATGTACGAAGACGGAAAATTAGGTGAAGTTCCTGAGGATTCCGATAAACTATCAAGAGTTGATTTCAAAGTGTACAGGGTTTGTTTGGATGGAACTGGAAGATTGGAGGAGGTGAAGAATTTGGGGAAGAAAGCGTTTGTTTTGGGGGCGGAGGGCAGTTTCTCAGTTTCAGAAAGAGATTTTGAAGGAATTAAAGGGAATTGCATATATTATCCTCGAGCATTGAGTGGCGTGATGAGCTCTATTGTTCATGTATTCGATGTTGAGGAAAGGATTTTGAAATGTGATAATGATGAAGAGATTTTCAGGCTACCGCTGATGTTGCTCGATCACAACGCCTCTCATGGATATGGTATCACTCACAATCTGGCTGTTTCTTGTACAGGTTTGCCATTTGGAAATCTCAAGCCTCGCGTGGATACATAA

Coding sequence (CDS)

ATGTCTGTTGGGTTTCGTTATCTAAGGATCATTAGAAACAGTGTTGTGCAGGAAGAAGTTATCTACTGGAACTCTATTAGCAGTCGAGCCTCGAATGATCATCAAACTCCTAACTCTGTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTATCGGGCGAAGGGCTGGTTTGCGATGGTGCGGATTGTAAAGAAAGGTAAATTGCGATTTCTGCGTCCGCTTTATCGGTCTTATCTTAGAAACACCTACGATTCCCTTCGTAAGCAAGTGAACTTGCACGATTTTCGAATTCACGAAGTGGCTAAATTGTATGAGCTTGTAGATACCAATGGCATTTTTGTTTCTGGAATAAAAAAGGTCGTAATGTTCCCCGATTCTCCCAGGATCGACGCGAACAACTGCACCGTTTTAGCAATGTACGAAGACGGAAAATTAGGTGAAGTTCCTGAGGATTCCGATAAACTATCAAGAGTTGATTTCAAAGTGTACAGGGTTTGTTTGGATGGAACTGGAAGATTGGAGGAGGTGAAGAATTTGGGGAAGAAAGCGTTTGTTTTGGGGGCGGAGGGCAGTTTCTCAGTTTCAGAAAGAGATTTTGAAGGAATTAAAGGGAATTGCATATATTATCCTCGAGCATTGAGTGGCGTGATGAGCTCTATTGTTCATGTATTCGATGTTGAGGAAAGGATTTTGAAATGTGATAATGATGAAGAGATTTTCAGGCTACCGCTGATGTTGCTCGATCACAACGCCTCTCATGGATATGGTATCACTCACAATCTGGCTGTTTCTTGTACAGGTTTGCCATTTGGAAATCTCAAGCCTCGCGTGGATACATAA

Protein sequence

MSVGFRYLRIIRNSVVQEEVIYWNSISSRASNDHQTPNSVSSSSSSSSSSYRAKGWFAMVRIVKKGKLRFLRPLYRSYLRNTYDSLRKQVNLHDFRIHEVAKLYELVDTNGIFVSGIKKVVMFPDSPRIDANNCTVLAMYEDGKLGEVPEDSDKLSRVDFKVYRVCLDGTGRLEEVKNLGKKAFVLGAEGSFSVSERDFEGIKGNCIYYPRALSGVMSSIVHVFDVEERILKCDNDEEIFRLPLMLLDHNASHGYGITHNLAVSCTGLPFGNLKPRVDT

Homology

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BLAST of Lcy04g018930 vs. ExPASy Swiss-Prot
Match: Q9SHX9 (Putative F-box protein At1g65770 OS=Arabidopsis thaliana OX=3702 GN=At1g65770 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 5.4e-04
Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 0


Query: 158 VDFKVYRVCLDGTGRLEEVKNLGKKAFVLGAEGSFSVSERDFEGIKGNCIYY 210
           V FKVY+   D  G++ EVK+LG KAFV+  +  FSV   +F G   N IY+
Sbjct: 271 VGFKVYKFD-DEQGKMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYF 321

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BLAST of Lcy04g018930 vs. ExPASy TrEMBL
Match: A0A0A0KHE7 (DUF295 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507410 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 6.3e-32
Identity = 91/203 (44.83%), Postives = 113/203 (55.67%), Query Frame = 0


Query: 53  AKGWFAMVRIVKKGKLRFLRPLYRSYLRNTYDSLRKQVNLHDFRIHEVAKLYELVDTNGI 112
           AK WFAM    K+G LRFLRPLY S  + T+++L  ++N  +FRI E+AKLY LV+T G+
Sbjct: 21  AKIWFAMADSAKEGILRFLRPLYLSNFKFTFEALPHEINSLEFRIRELAKLYMLVNTEGV 80

Query: 113 FVSGIKKVVMFPDSPRIDANNCTVLAMYEDGKLGEVPEDSDK--------LSRVDFKVYR 172
            VS I+KVVMFPDSP ID  NC V A++ DGKLG      +K         +R D  VYR
Sbjct: 81  CVSEIRKVVMFPDSPWIDTKNCIVFAIFVDGKLGFTKLTDEKWTMIEKHNFARGDVIVYR 140

Query: 173 --------------------------VCLDGTGRL--------EEVKNLGKKAFVLG--A 212
                                     + + G G+         EEVKNLG  A VLG   
Sbjct: 141 GKFYAVDRRGEVFSVDSSSMELSQISLPMSGFGKQKHLVECGGEEVKNLGNDAIVLGNKR 200

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BLAST of Lcy04g018930 vs. ExPASy TrEMBL
Match: A0A5A7SHJ7 (Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00810 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.0e-29
Identity = 106/306 (34.64%), Postives = 137/306 (44.77%), Query Frame = 0


Query: 41  SSSSSSSSSSY-RAKGWFAMVRIVKKGKLRFLRPLYRSYLRNTYDSLRKQVNLHDFRIHE 100
           SS+SSSSSSSY  A+GW A V   K GK+RFL PL   Y +   D  RK+VNL DF I+E
Sbjct: 94  SSTSSSSSSSYCAAEGWLAKVESTKLGKMRFLHPLSTRYAKCNSDLFRKEVNLLDFGIYE 153

Query: 101 VAKLYELVDTNGIFVSGIKKVVMFPDSPRIDANNCTVLAMYEDGKLGEVPEDSDKLSR-- 160
           VAK Y L  TNG  V  I KVVMFPDSP ID   CT+LA+Y  GKLG      DK +   
Sbjct: 154 VAKSYTLGYTNGSPVPRITKVVMFPDSPWIDVKKCTILAVYAGGKLGFAKHGDDKWTLID 213

Query: 161 ------------------------------------------------------------ 220
                                                                       
Sbjct: 214 HRNFHYDDVIVYKGQFYAVDRWGTVFWIDSSMRLVQFSPPLCGFGNQKHLVECNGELYVV 273

Query: 221 --------------------------------VDFKVYRVCLDGTGRLEEVKNLGKKAFV 249
                                           +DFK++R+  +  GR  EVKNLG ++F+
Sbjct: 274 DRFLDKEPLLWNADIFHIHWLNNLIEDSPPKVIDFKLHRLDQE-WGRWVEVKNLGNQSFI 333

[Close]

BLAST of Lcy04g018930 vs. ExPASy TrEMBL
Match: A0A1S4DT77 (putative F-box protein At1g65770 OS=Cucumis melo OX=3656 GN=LOC103485361 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 1.0e-29
Identity = 106/306 (34.64%), Postives = 137/306 (44.77%), Query Frame = 0


Query: 41  SSSSSSSSSSY-RAKGWFAMVRIVKKGKLRFLRPLYRSYLRNTYDSLRKQVNLHDFRIHE 100
           SS+SSSSSSSY  A+GW A V   K GK+RFL PL   Y +   D  RK+VNL DF I+E
Sbjct: 94  SSTSSSSSSSYCAAEGWLAKVESTKLGKMRFLHPLSTRYAKCNSDLFRKEVNLLDFGIYE 153

Query: 101 VAKLYELVDTNGIFVSGIKKVVMFPDSPRIDANNCTVLAMYEDGKLGEVPEDSDKLSR-- 160
           VAK Y L  TNG  V  I KVVMFPDSP ID   CT+LA+Y  GKLG      DK +   
Sbjct: 154 VAKSYTLGYTNGSPVPRITKVVMFPDSPWIDVKKCTILAVYAGGKLGFAKHGDDKWTLID 213

Query: 161 ------------------------------------------------------------ 220
                                                                       
Sbjct: 214 HRNFHYDDVIVYKGQFYAVDRWGTVFWIDSSMRLVQFSPPLCGFGNQKHLVECNGELYVV 273

Query: 221 --------------------------------VDFKVYRVCLDGTGRLEEVKNLGKKAFV 249
                                           +DFK++R+  +  GR  EVKNLG ++F+
Sbjct: 274 DRFLDKEPLLWNADIFHIHWLNNLIEDSPPKVIDFKLHRLDQE-WGRWVEVKNLGNQSFI 333

[Close]

BLAST of Lcy04g018930 vs. ExPASy TrEMBL
Match: A0A0A0KJJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507420 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.2e-28
Identity = 107/317 (33.75%), Postives = 139/317 (43.85%), Query Frame = 0


Query: 33  DHQTPNSVSSSSSSSSSSYRAKGWFAMVRIVKKGKLRFLRPLYRSYLRNTYDSLRKQVNL 92
           D  + +S SSSSSSSS S  A+GW A V   K GK+RFL PL   Y +   D LRK+VNL
Sbjct: 90  DFASSSSSSSSSSSSSFSCPAEGWLAKVESTKLGKMRFLHPLSTRYAKCNSDLLRKEVNL 149

Query: 93  HDFRIHEVAKLYELVDTNGIFVSGIKKVVMFPDSPRIDANNCTVLAMYEDGKLGEVPEDS 152
            DF I+EVAK Y L  TNG  V  I KVVMFPDSP ID   CT+LA+Y  GKLG      
Sbjct: 150 LDFGIYEVAKSYTLGYTNGSLVPRITKVVMFPDSPWIDVKKCTILAIYAGGKLGFAKHGD 209

Query: 153 DKLSR------------------------------------------------------- 212
           +K +                                                        
Sbjct: 210 NKWTLIDHCNFHYDDVIVYKGQFYAVDRWGTIFWIDSSMKLVQFSPPLCGFGNQKHLVEC 269

Query: 213 ---------------------------------------VDFKVYRVCLDGTGRLEEVKN 253
                                                  +DFK++R+  +  GR  EVKN
Sbjct: 270 NGELYVVDRFLDKEPLLWNADIFHIHWLNNLIEDSSPKVIDFKLHRLDQE-WGRWVEVKN 329

[Close]

BLAST of Lcy04g018930 vs. ExPASy TrEMBL
Match: A0A6J1EGF3 (putative F-box protein At1g65770 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433939 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.6e-27
Identity = 103/317 (32.49%), Postives = 139/317 (43.85%), Query Frame = 0


Query: 33  DHQTPNSVSSSSSSSSSSYRAKGWFAMVRIVKKGKLRFLRPLYRSYLRNTYDSLRKQVNL 92
           DHQ      SS S+SSSS+ A+GW A V   K G +RFL PL   Y++   +  RK+VNL
Sbjct: 84  DHQ-----HSSDSASSSSFAAEGWLAKVESTKLGTMRFLHPLSTRYVKYDNEVFRKEVNL 143

Query: 93  HDFRIHEVAKLYELVDTNGIFVSGIKKVVMFPDSPRIDANNCTVLAMYEDGKLG------ 152
            DFRI+EVAK Y L  TNG  V  I KVVMFPD P ID   CT++A+Y  GKLG      
Sbjct: 144 LDFRIYEVAKSYTLGYTNGALVPRITKVVMFPDCPWIDVKYCTIVAVYAGGKLGFAKHGD 203

Query: 153 -------------------------------------------------------EVPED 212
                                                                   + E 
Sbjct: 204 YKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTIFWIDSSMRLVQFSPPLCGFGNQKHLVES 263

Query: 213 SDKL---------------------------------SRVDFKVYRVCLDGTGRLEEVKN 253
            D+L                                   +DFKV+R+  +  GR  EV+N
Sbjct: 264 DDELYVVDRFLDKEPLLWNADIFHIHWLNNLIEDSPPKVIDFKVHRLDQE-WGRWVEVRN 323

[Close]

BLAST of Lcy04g018930 vs. NCBI nr
Match: XP_038883219.1 (putative F-box protein At1g65770 [Benincasa hispida])

HSP 1 Score: 156.0 bits (393), Expect = 4.8e-34
Identity = 114/314 (36.31%), Postives = 149/314 (47.45%), Query Frame = 0


Query: 11  IRNSVVQEEVIYWNSISSRASNDHQTPNSVSSSSSSSSSSYRAKGWFAMVRIVKKGKLRF 70
           +++ ++  ++IY  S   R    HQT N+ SSSSS+++++  AK WFA+V    +GKLR 
Sbjct: 70  VKDILLARKIIYRFSPLDR----HQTTNAASSSSSAAAAA-AAKVWFAIVDSTNEGKLRI 129

Query: 71  LRPLYRSYLRNTYDSLRKQVNLHDFRIHEVAKLYELVDTNGIFVSGIKKVVMFPDSPRID 130
           LRPLY S L+ TY++LR ++NL +FRIHE+AK Y +V+T G++VS I+KVVMFPDSP ID
Sbjct: 130 LRPLYLSNLKFTYEALRDEMNLLEFRIHELAKSYTIVNTEGVYVSDIRKVVMFPDSPWID 189

Query: 131 ANNCTVLAMYEDGKLG-------------------------------------------- 190
             NC VLA++ DGKLG                                            
Sbjct: 190 KKNCAVLAIFRDGKLGFAKLRDNKWTMFEKHNFAGGDVIVYRGKFYAVDRRGRIFSIDSW 249

Query: 191 --------------------------------------------------------EVPE 212
                                                                   +V  
Sbjct: 250 SMELSQISPPMSVFGKQKHLVECGGEVYVVDRFDDFSDSEDDVDDGGDNFNYNYNDDVDS 309

[Close]

BLAST of Lcy04g018930 vs. NCBI nr
Match: XP_038881861.1 (putative F-box protein At1g65770 [Benincasa hispida])

HSP 1 Score: 143.3 bits (360), Expect = 3.2e-30
Identity = 113/343 (32.94%), Postives = 151/343 (44.02%), Query Frame = 0


Query: 10  IIRNSVVQEEVIYWNSISSRASNDHQTPNSVSSSSSSSSSSYRAKGWFAMVRIVKKGKLR 69
           +IR  + +   ++    S  AS+   + +S SSSSSSSSSS  A+GW A V   K GK+R
Sbjct: 72  LIRRIIYRLSPLHHRQTSDSASS---SSSSSSSSSSSSSSSCAAEGWLAKVESTKLGKMR 131

Query: 70  FLRPLYRSYLRNTYDSLRKQVNLHDFRIHEVAKLYELVDTNGIFVSGIKKVVMFPDSPRI 129
           FL PL   Y +   +  RK+VNL DF I+EVAK Y L  TNG  V  I KVVMFPDSP I
Sbjct: 132 FLHPLSTRYAKYNNELFRKEVNLLDFGIYEVAKSYTLGYTNGALVPRITKVVMFPDSPWI 191

Query: 130 DANNCTVLAMYEDGKLGEVPEDSDKLSR-------------------------------- 189
           D  NCT+LA+Y  GKLG      DK +                                 
Sbjct: 192 DVKNCTILAVYAGGKLGFAKHGDDKWTLIDDRNFHYDDVIVYKGQFYAVDRWGTVFWIDS 251

Query: 190 ------------------------------------------------------------ 249
                                                                       
Sbjct: 252 SMKLVQFSPPLCGFGNQKHLVESGGELYVVDRFLDKEPSLWNADIFHIHWLNNLIEDSPP 311

Query: 250 --VDFKVYRVCLDGTGRLEEVKNLGKKAFVLGAEGSFSVSERDFEGIKGNCIYYPRALSG 254
             +DFK++R+  +  GR  EVK+LG ++FVLG +  FSVS   FEG+KG+CIY+      
Sbjct: 312 KVIDFKLHRLDQE-WGRWVEVKSLGNQSFVLGNDCCFSVSSPHFEGVKGSCIYFTHTPKC 371

[Close]

BLAST of Lcy04g018930 vs. NCBI nr
Match: XP_016899202.1 (PREDICTED: putative F-box protein At1g65770 [Cucumis melo] >KAA0025628.1 putative F-box protein [Cucumis melo var. makuwa] >TYK12503.1 putative F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-29
Identity = 106/306 (34.64%), Postives = 137/306 (44.77%), Query Frame = 0


Query: 41  SSSSSSSSSSY-RAKGWFAMVRIVKKGKLRFLRPLYRSYLRNTYDSLRKQVNLHDFRIHE 100
           SS+SSSSSSSY  A+GW A V   K GK+RFL PL   Y +   D  RK+VNL DF I+E
Sbjct: 94  SSTSSSSSSSYCAAEGWLAKVESTKLGKMRFLHPLSTRYAKCNSDLFRKEVNLLDFGIYE 153

Query: 101 VAKLYELVDTNGIFVSGIKKVVMFPDSPRIDANNCTVLAMYEDGKLGEVPEDSDKLSR-- 160
           VAK Y L  TNG  V  I KVVMFPDSP ID   CT+LA+Y  GKLG      DK +   
Sbjct: 154 VAKSYTLGYTNGSPVPRITKVVMFPDSPWIDVKKCTILAVYAGGKLGFAKHGDDKWTLID 213

Query: 161 ------------------------------------------------------------ 220
                                                                       
Sbjct: 214 HRNFHYDDVIVYKGQFYAVDRWGTVFWIDSSMRLVQFSPPLCGFGNQKHLVECNGELYVV 273

Query: 221 --------------------------------VDFKVYRVCLDGTGRLEEVKNLGKKAFV 249
                                           +DFK++R+  +  GR  EVKNLG ++F+
Sbjct: 274 DRFLDKEPLLWNADIFHIHWLNNLIEDSPPKVIDFKLHRLDQE-WGRWVEVKNLGNQSFI 333

[Close]

BLAST of Lcy04g018930 vs. NCBI nr
Match: KAG6603876.1 (putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 135.6 bits (340), Expect = 6.7e-28
Identity = 108/314 (34.39%), Postives = 139/314 (44.27%), Query Frame = 0


Query: 11  IRNSVVQEEVIYWNSISSRASNDHQTPNSVSSSSSSSSSSYRAKGWFAMVRIVKKGKLRF 70
           IR S++  ++IY  S      + HQT N+VSSS++       AK WFA+V   +KGK RF
Sbjct: 69  IRYSILTRKIIYRLS----PLDFHQT-NAVSSSAA-------AKRWFAVVETTQKGKFRF 128

Query: 71  LRPLYRSYLRNTYDSLRKQVNLHDFRIHEVAKLYELVDTNGIFVSGIKKVVMFPDSPRID 130
           L P   S LR T++S +K+VNL +FRIHE+AK Y LV+T+G+ V  I KVVMFPDSP ID
Sbjct: 129 LAPANLSNLRLTFESFQKEVNLLEFRIHELAKSYVLVNTDGVCVPEISKVVMFPDSPWID 188

Query: 131 ANNCTVLAMYEDGKLG-------------------------------------------- 190
           A NCTVLAMY++GKLG                                            
Sbjct: 189 AKNCTVLAMYKNGKLGFAKLGDEKWTLIEEHNFDRGDVIACRGQFYAVDRKGIVFSINSS 248

Query: 191 ------------------------------------------------------------ 212
                                                                       
Sbjct: 249 SMKLVLMSPPLCSSGKQKHMVECGGEVYVVDRFDDVSDTDTGSSESESGSESEEEEEEEE 308

[Close]

BLAST of Lcy04g018930 vs. NCBI nr
Match: XP_004134837.2 (putative F-box protein At1g65770 [Cucumis sativus] >KGN48969.1 hypothetical protein Csa_003175 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 6.7e-28
Identity = 107/317 (33.75%), Postives = 139/317 (43.85%), Query Frame = 0


Query: 33  DHQTPNSVSSSSSSSSSSYRAKGWFAMVRIVKKGKLRFLRPLYRSYLRNTYDSLRKQVNL 92
           D  + +S SSSSSSSS S  A+GW A V   K GK+RFL PL   Y +   D LRK+VNL
Sbjct: 90  DFASSSSSSSSSSSSSFSCPAEGWLAKVESTKLGKMRFLHPLSTRYAKCNSDLLRKEVNL 149

Query: 93  HDFRIHEVAKLYELVDTNGIFVSGIKKVVMFPDSPRIDANNCTVLAMYEDGKLGEVPEDS 152
            DF I+EVAK Y L  TNG  V  I KVVMFPDSP ID   CT+LA+Y  GKLG      
Sbjct: 150 LDFGIYEVAKSYTLGYTNGSLVPRITKVVMFPDSPWIDVKKCTILAIYAGGKLGFAKHGD 209

Query: 153 DKLSR------------------------------------------------------- 212
           +K +                                                        
Sbjct: 210 NKWTLIDHCNFHYDDVIVYKGQFYAVDRWGTIFWIDSSMKLVQFSPPLCGFGNQKHLVEC 269

Query: 213 ---------------------------------------VDFKVYRVCLDGTGRLEEVKN 253
                                                  +DFK++R+  +  GR  EVKN
Sbjct: 270 NGELYVVDRFLDKEPLLWNADIFHIHWLNNLIEDSSPKVIDFKLHRLDQE-WGRWVEVKN 329

[Close]

BLAST of Lcy04g018930 vs. TAIR 10
Match: AT1G65770.1 (ascorbic acid mannose pathway regulator 1 )

HSP 1 Score: 46.6 bits (109), Expect = 3.8e-05
Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 0


Query: 158 VDFKVYRVCLDGTGRLEEVKNLGKKAFVLGAEGSFSVSERDFEGIKGNCIYY 210
           V FKVY+   D  G++ EVK+LG KAFV+  +  FSV   +F G   N IY+
Sbjct: 271 VGFKVYKFD-DEQGKMMEVKSLGDKAFVIATDTCFSVLAHEFYGCLENAIYF 321

The following BLAST results are available for this feature:

BLAST of Lcy04g018930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHX9	5.4e-04	46.15	Putative F-box protein At1g65770 OS=Arabidopsis thaliana OX=3702 GN=At1g65770 PE...	[more]

BLAST of Lcy04g018930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHE7	6.3e-32	44.83	DUF295 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507410 PE=4...	[more]
A0A5A7SHJ7	1.0e-29	34.64	Putative F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2...	[more]
A0A1S4DT77	1.0e-29	34.64	putative F-box protein At1g65770 OS=Cucumis melo OX=3656 GN=LOC103485361 PE=4 SV...	[more]
A0A0A0KJJ1	3.2e-28	33.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507420 PE=4 SV=1	[more]
A0A6J1EGF3	1.6e-27	32.49	putative F-box protein At1g65770 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Lcy04g018930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883219.1	4.8e-34	36.31	putative F-box protein At1g65770 [Benincasa hispida]	[more]
XP_038881861.1	3.2e-30	32.94	putative F-box protein At1g65770 [Benincasa hispida]	[more]
XP_016899202.1	2.1e-29	34.64	PREDICTED: putative F-box protein At1g65770 [Cucumis melo] >KAA0025628.1 putativ...	[more]
KAG6603876.1	6.7e-28	34.39	putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_004134837.2	6.7e-28	33.75	putative F-box protein At1g65770 [Cucumis sativus] >KGN48969.1 hypothetical prot...	[more]

BLAST of Lcy04g018930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G65770.1	3.8e-05	46.15	ascorbic acid mannose pathway regulator 1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005174	Domain unknown function DUF295	PFAM	PF03478	DUF295	coord: 174..209 e-value: 4.5E-10 score: 39.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..50
None	No IPR available	PANTHER	PTHR47123:SF6	ASCORBIC ACID MANNOSE PATHWAY REGULATOR-RELATED	coord: 45..147 coord: 157..232
None	No IPR available	PANTHER	PTHR47123	F-BOX PROTEIN SKIP23	coord: 157..232
None	No IPR available	PANTHER	PTHR47123	F-BOX PROTEIN SKIP23	coord: 45..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g018930.1	Lcy04g018930.1	mRNA