Lcy04g013450 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGTTGTGCCGATGCTGCAGGTTTTCAATGATACTGCTCGATATGTTGATCAAGGAGGAGGCAAGAGGAAAGGTAGTGTGCTATTTTGATCCCATTAAGTTTTATATGATCGATATTCATATTCTCACATTATAACTGCCTCTTGCAGGTGCTTTTGCTGTTTACTTGGAGCCATGGCATGCTGATGTATTTGAGGTTTTGGATCTCAGAAAGAACCATGGAAAAGTAATTACTTTTTGCTGATTTATTTAGTGGATATTATGCAACATTTTATTCATTTGATTCTAAAATGAGTATTCAAATATTTTTAGCATACACTTTTAATACATAAGTGCTAAATGTCTTAATATTGCAACTGTTTACAACAACAAATTCACCACTGAAGAACTAACTCCCTGAAAATATATTGCCCATATAAGAAAATACGTAAATCAGCCTGATGATCTAAGAGCTATTTACAAGTATGATTGATCTTCCTTCCTGAAAATATTTTTACAAGTATGATTGATCTCCCTGAAAATATTTTTAGCATACACTTTTAATACATAAGTGCTAAATGTCTCTCTCCATTCCATCCTCCAGTGGTGAATTTGTTGTTGTGAACAAGCATCTCCTGCATGACTTGACAGAGATGGGTTTATGGTCTCCTGCACTGAAGAATAAGATTCTCTATGAGAGTGACTCTGTTCAGAAGATTCAAGAAATCCCTGATGATCTAAGAGCTATTTACAAGTATGATTGATCTTCCTTGCATTTCCCATTCCTTGCCCTTGATGTTGATTTGTCCTTCTGACTTGTTCTTTATATATTTGAACTCAGAACCGTTTGGGAGATCAAGCAAAAGACATAA ATGGGGTTGTGCCGATGCTGCAGGTTTTCAATGATACTGCTCGATATGTTGATCAAGGAGGAGGCAAGAGGAAAGGTGCTTTTGCTGTTTACTTGGAGCCATGGCATGCTGATGTATTTGAGGTTTTGGATCTCAGAAAGAACCATGGAAAATGGTGAATTTGTTGTTGTGAACAAGCATCTCCTGCATGACTTGACAGAGATGGGTTTATGGTCTCCTGCACTGAAGAATAAGATTCTCTATGAGAGTGACTCTGTTCAGAAGATTCAAGAAATCCCTGATGATCTAAGAGCTATTTACAAAACCGTTTGGGAGATCAAGCAAAAGACATAA ATGGGGTTGTGCCGATGCTGCAGGTTTTCAATGATACTGCTCGATATGTTGATCAAGGAGGAGGCAAGAGGAAAGGTGCTTTTGCTGTTTACTTGGAGCCATGGCATGCTGATGTATTTGAGGTTTTGGATCTCAGAAAGAACCATGGAAAATGGTGAATTTGTTGTTGTGAACAAGCATCTCCTGCATGACTTGACAGAGATGGGTTTATGGTCTCCTGCACTGAAGAATAAGATTCTCTATGAGAGTGACTCTGTTCAGAAGATTCAAGAAATCCCTGATGATCTAAGAGCTATTTACAAAACCGTTTGGGAGATCAAGCAAAAGACATAA MGLCRCCRFSMILLDMLIKEEARGKVLLLFTWSHGMLMYLRFWISERTMENGEFVVVNKHLLHDLTEMGLWSPALKNKILYESDSVQKIQEIPDDLRAIYKTVWEIKQKT Homology
BLAST of Lcy04g013450 vs. ExPASy Swiss-Prot
Match: Q9SJ20 (Ribonucleoside-diphosphate reductase large subunit OS=Arabidopsis thaliana OX=3702 GN=RNR1 PE=1 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 4.2e-21 Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 0
BLAST of Lcy04g013450 vs. ExPASy Swiss-Prot
Match: Q9UW15 (Ribonucleoside-diphosphate reductase large chain OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=rnr-1 PE=1 SV=2) HSP 1 Score: 86.7 bits (213), Expect = 1.8e-16 Identity = 40/67 (59.70%), Postives = 51/67 (76.12%), Query Frame = 0
BLAST of Lcy04g013450 vs. ExPASy Swiss-Prot
Match: P79732 (Ribonucleoside-diphosphate reductase large subunit OS=Danio rerio OX=7955 GN=rrm1 PE=2 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 9.1e-16 Identity = 38/67 (56.72%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of Lcy04g013450 vs. ExPASy Swiss-Prot
Match: P07742 (Ribonucleoside-diphosphate reductase large subunit OS=Mus musculus OX=10090 GN=Rrm1 PE=1 SV=2) HSP 1 Score: 84.3 bits (207), Expect = 9.1e-16 Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of Lcy04g013450 vs. ExPASy Swiss-Prot
Match: P23921 (Ribonucleoside-diphosphate reductase large subunit OS=Homo sapiens OX=9606 GN=RRM1 PE=1 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.6e-15 Identity = 39/67 (58.21%), Postives = 49/67 (73.13%), Query Frame = 0
BLAST of Lcy04g013450 vs. ExPASy TrEMBL
Match: A0A6J1HH47 (Ribonucleoside-diphosphate reductase OS=Cucurbita moschata OX=3662 GN=LOC111463501 PE=3 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 2.5e-24 Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of Lcy04g013450 vs. ExPASy TrEMBL
Match: A0A6J1KVF2 (Ribonucleoside-diphosphate reductase OS=Cucurbita maxima OX=3661 GN=LOC111496788 PE=3 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 7.2e-24 Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of Lcy04g013450 vs. ExPASy TrEMBL
Match: A0A6J1BYB7 (Ribonucleoside-diphosphate reductase OS=Momordica charantia OX=3673 GN=LOC111005845 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.1e-23 Identity = 56/67 (83.58%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of Lcy04g013450 vs. ExPASy TrEMBL
Match: A0A6J1D3E8 (Ribonucleoside-diphosphate reductase OS=Momordica charantia OX=3673 GN=LOC111017235 PE=3 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 4.7e-23 Identity = 55/67 (82.09%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of Lcy04g013450 vs. ExPASy TrEMBL
Match: W1PNH7 (Ribonucleoside-diphosphate reductase OS=Amborella trichopoda OX=13333 GN=AMTR_s00017p00232600 PE=3 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 8.0e-23 Identity = 54/67 (80.60%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of Lcy04g013450 vs. NCBI nr
Match: KAG6595105.1 (Ribonucleoside-diphosphate reductase large subunit, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 121.3 bits (303), Expect = 5.1e-24 Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of Lcy04g013450 vs. NCBI nr
Match: KAG7027121.1 (Ribonucleoside-diphosphate reductase large subunit [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 121.3 bits (303), Expect = 5.1e-24 Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of Lcy04g013450 vs. NCBI nr
Match: XP_022963223.1 (ribonucleoside-diphosphate reductase large subunit [Cucurbita moschata]) HSP 1 Score: 121.3 bits (303), Expect = 5.1e-24 Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of Lcy04g013450 vs. NCBI nr
Match: XP_023518693.1 (ribonucleoside-diphosphate reductase large subunit [Cucurbita pepo subsp. pepo]) HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23 Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of Lcy04g013450 vs. NCBI nr
Match: XP_023003073.1 (ribonucleoside-diphosphate reductase large subunit [Cucurbita maxima]) HSP 1 Score: 119.8 bits (299), Expect = 1.5e-23 Identity = 57/67 (85.07%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of Lcy04g013450 vs. TAIR 10
Match: AT2G21790.1 (ribonucleotide reductase 1 ) HSP 1 Score: 102.1 bits (253), Expect = 3.0e-22 Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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