Lcy04g009420 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g009420
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	CCHC-type domain-containing protein
Location	Chr04: 40608352 .. 40609503 (-)
RNA-Seq Expression	Lcy04g009420
Synteny	Lcy04g009420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGGGGGCAACCAACCGGTTTGCCAGCAAGACCAAGAAGCTGACGTTGATCATCAGGCGATGGAGGAAGCTCTCATCGAGAAGCAGGAAGGAGGAGAATCAGACGAACGACCAGGGATAGATGAAGTTTTTAATCAAATGGAAAAATTGAAACTGGTGGAAGAAGGGAGAGTTGTAGAGGTGGAGGACAATGACATTGATGAGTCTGATAGGGATTTCAAAGGATCCATAGCGTGCAAAATCTTAACTTCAAAATACATAAGCTCGGAGGTGTTTATGCATTTCATGCCCAAGATCTGGGGCCTTGAAGGAGCGGTGAAGATGGAAAAGGCGGAAGCGAATATTTATTTATGCAAGTTCCGGTGAATAAGAGACAAAGAAAGAGTTAGTAGAGGCGGTCCATGGTCTTACGACGATGCAATACTAATCACCGATGAACCAAAAGGGAGTTGTATTGTGGAGGAACTTGAGTTCAAATACGTGTCTTTTTGGATTCACTTCCATAACTTACCACGTGTATGCTTTTGCAGGAAATATGCGGTTGCTCTAGCCAATTCAATAGGAGAATTCGAGACAGCGGAAGTGGATGAGAATGATAAGCTGCAAGGAGAAACGTTACGGGTCAAGGTCAAAATCAACTGCAAAGAGCCATTAGAAAGAGGAACCAACGTGAAGACGGGGTTGATGGCGACGAAAACATGGATTCCAATAACCTACGATAAACTCCCCGATTTCTGTTATTGTTGTGGAAAGCTTGGCCATGTCATCCAAGAGTGTGAAGTTGAGGGAGTCGAAAATAGCAATGAAAAACTGTTTGGGATCGAATTAAGAGAAACCAGAGGCAGTAAAGGAATTTACAAGGGCTGGAAGACTGAAAACAGAGATCAAACTAGTAGAGGAAGAGGCAAGGGAAGATTCCAAACTGAGGAAGAAATTATCAGCCGAATGAAATCAGAGAGAATTAGAGACATCAGCGGTTTTGGTCAAGAGACAGTCCCGAGGGAGTCACGGCCAACTTGGGCGAAAGAGATGACCGGCGCAGGGAAGGGAGTAGAACAGGCGGCGAGCAAACGAAGGAGAGAGGAAAGGACAGAAATTCAGAACGGTCAAATGGATCACGAGGCTACAGGAAATCTGACACTATAG

mRNA sequence

ATGGAAGAAGGGGGCAACCAACCGGTTTGCCAGCAAGACCAAGAAGCTGACGTTGATCATCAGGCGATGGAGGAAGCTCTCATCGAGAAGCAGGAAGGAGGAGAATCAGACGAACGACCAGGGATAGATGAAGTTTTTAATCAAATGGAAAAATTGAAACTGGTGGAAGAAGGGAGAGTTGTAGAGGTGGAGGACAATGACATTGATGAGTCTGATAGGGATTTCAAAGGATCCATAGCGTGCAAAATCTTAACTTCAAAATACATAAGCTCGGAGGTGTTTATGCATTTCATGCCCAAGATCTGGGGCCTTGAAGGAGCGGTGAAGATGGAAAAGGCGGAAGCGAATATTTATTTATGCAAGTTCCGGAAATATGCGGTTGCTCTAGCCAATTCAATAGGAGAATTCGAGACAGCGGAAGTGGATGAGAATGATAAGCTGCAAGGAGAAACGTTACGGGTCAAGGTCAAAATCAACTGCAAAGAGCCATTAGAAAGAGGAACCAACGTGAAGACGGGGTTGATGGCGACGAAAACATGGATTCCAATAACCTACGATAAACTCCCCGATTTCTGTTATTGTTGTGGAAAGCTTGGCCATGTCATCCAAGAGTGTGAAGTTGAGGGAGTCGAAAATAGCAATGAAAAACTGTTTGGGATCGAATTAAGAGAAACCAGAGGCAGTAAAGGAATTTACAAGGGCTGGAAGACTGAAAACAGAGATCAAACTAGTAGAGGAAGAGGCAAGGGAAGATTCCAAACTGAGGAAGAAATTATCAGCCGAATGAAATCAGAGAGAATTAGAGACATCAGCGGTTTTGGTCAAGAGACAGTCCCGAGGGAGTCACGGCCAACTTGGGCGAAAGAGATGACCGGCGCAGGGAAGGGAGTAGAACAGGCGGCGAGCAAACGAAGGAGAGAGGAAAGGACAGAAATTCAGAACGGTCAAATGGATCACGAGGCTACAGGAAATCTGACACTATAG

Coding sequence (CDS)

ATGGAAGAAGGGGGCAACCAACCGGTTTGCCAGCAAGACCAAGAAGCTGACGTTGATCATCAGGCGATGGAGGAAGCTCTCATCGAGAAGCAGGAAGGAGGAGAATCAGACGAACGACCAGGGATAGATGAAGTTTTTAATCAAATGGAAAAATTGAAACTGGTGGAAGAAGGGAGAGTTGTAGAGGTGGAGGACAATGACATTGATGAGTCTGATAGGGATTTCAAAGGATCCATAGCGTGCAAAATCTTAACTTCAAAATACATAAGCTCGGAGGTGTTTATGCATTTCATGCCCAAGATCTGGGGCCTTGAAGGAGCGGTGAAGATGGAAAAGGCGGAAGCGAATATTTATTTATGCAAGTTCCGGAAATATGCGGTTGCTCTAGCCAATTCAATAGGAGAATTCGAGACAGCGGAAGTGGATGAGAATGATAAGCTGCAAGGAGAAACGTTACGGGTCAAGGTCAAAATCAACTGCAAAGAGCCATTAGAAAGAGGAACCAACGTGAAGACGGGGTTGATGGCGACGAAAACATGGATTCCAATAACCTACGATAAACTCCCCGATTTCTGTTATTGTTGTGGAAAGCTTGGCCATGTCATCCAAGAGTGTGAAGTTGAGGGAGTCGAAAATAGCAATGAAAAACTGTTTGGGATCGAATTAAGAGAAACCAGAGGCAGTAAAGGAATTTACAAGGGCTGGAAGACTGAAAACAGAGATCAAACTAGTAGAGGAAGAGGCAAGGGAAGATTCCAAACTGAGGAAGAAATTATCAGCCGAATGAAATCAGAGAGAATTAGAGACATCAGCGGTTTTGGTCAAGAGACAGTCCCGAGGGAGTCACGGCCAACTTGGGCGAAAGAGATGACCGGCGCAGGGAAGGGAGTAGAACAGGCGGCGAGCAAACGAAGGAGAGAGGAAAGGACAGAAATTCAGAACGGTCAAATGGATCACGAGGCTACAGGAAATCTGACACTATAG

Protein sequence

MEEGGNQPVCQQDQEADVDHQAMEEALIEKQEGGESDERPGIDEVFNQMEKLKLVEEGRVVEVEDNDIDESDRDFKGSIACKILTSKYISSEVFMHFMPKIWGLEGAVKMEKAEANIYLCKFRKYAVALANSIGEFETAEVDENDKLQGETLRVKVKINCKEPLERGTNVKTGLMATKTWIPITYDKLPDFCYCCGKLGHVIQECEVEGVENSNEKLFGIELRETRGSKGIYKGWKTENRDQTSRGRGKGRFQTEEEIISRMKSERIRDISGFGQETVPRESRPTWAKEMTGAGKGVEQAASKRRREERTEIQNGQMDHEATGNLTL

Homology

[Close]

BLAST of Lcy04g009420 vs. ExPASy TrEMBL
Match: A0A0A0LNB5 (CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G427330 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.0e-17
Identity = 47/86 (54.65%), Postives = 59/86 (68.60%), Query Frame = 0


Query: 123 RKYAVALANSIGEFETAEVDENDKLQGETLRVKVKINCKEPLERGTNVKTGLMATKTWIP 182
           RKY VAL NSI  FE  E  E  +  GE L+V+ KI+ ++ L   TN+K G MA +  IP
Sbjct: 31  RKYVVALTNSIDSFEEVEESELRRTYGELLKVREKIDVQQSLNHETNIKLGAMAKEKCIP 90

Query: 183 ITYDKLPDFCYCCGKLGHVIQECEVE 209
           +TY+KL DFCY CG LGHV+QECEV+
Sbjct: 91  VTYEKLSDFCYNCGILGHVLQECEVK 116

[Close]

BLAST of Lcy04g009420 vs. ExPASy TrEMBL
Match: A0A5D3C0K2 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68G001040 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.8e-14
Identity = 48/106 (45.28%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 163 PLERGTNVKTGLMATKTWIPITYDKLPDFCYCCGKLGHVIQECEVEGVENSNEKLFGIEL 222
           P   GT  K G+MA + WIP++Y+KLPDFCY CG++GHV+QEC+  G +    + FG+ L
Sbjct: 37  PNVHGTIKKLGVMAKEKWIPVSYEKLPDFCYKCGRVGHVVQECKEVGDDGEEGQRFGVWL 96

Query: 223 RETRGSKGIYKGWKTENRDQ--TSRGRGKGRFQTEEEIISRMKSER 267
           R+++ S+ I KG + E R Q    RGRG+G+     E   R KS R
Sbjct: 97  RKSQTSQSISKGRREEVRSQFTIDRGRGEGK---GIEAFKRDKSSR 139

[Close]

BLAST of Lcy04g009420 vs. ExPASy TrEMBL
Match: A0A6P9EID8 (uncharacterized protein LOC118348856 OS=Juglans regia OX=51240 GN=LOC118348856 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 2.4e-14
Identity = 55/202 (27.23%), Postives = 93/202 (46.04%), Query Frame = 0


Query: 44  EVFNQMEKLKLVEEGRVVEVEDNDIDESDRDFKGSIACKILTSKYISSEVFMHFMPKIWG 103
           E   Q   L   E+G  + VE + ++ +    +  +   +LT +Y + E   + M K+W 
Sbjct: 6   EFLYQHLSLSEKEKGE-IHVESSLLESNITRGERCLVMSLLTDRYYNREALKNMMRKVWQ 65

Query: 104 LEGAVKMEKAEANIYLCKFRK-----------------YAVAL-------------ANSI 163
               V  +   +N++L +F                   Y V L              N I
Sbjct: 66  PACKVPFKDLGSNLFLVEFEDDRDKQRILWEGPWSFDCYLVLLKQLEGNYKGGRLIGNKI 125

Query: 164 GEFETAEVDENDKLQGETLRVKVKINCKEPLERGTNVKTGLMATKTWIPITYDKLPDFCY 216
           G  E  + ++++   GE LR++V++N  +PL RG  VK G   +  WI   Y++LP+FCY
Sbjct: 126 GIVEEVDGEQSEVAWGEYLRIRVRVNISQPLMRGITVKLGQFGS-VWIRFAYERLPNFCY 185

[Close]

BLAST of Lcy04g009420 vs. ExPASy TrEMBL
Match: A0A5E4G034 (PREDICTED: DUF4283 domain-containing OS=Prunus dulcis OX=3755 GN=ALMOND_2B021569 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.4e-13
Identity = 72/277 (25.99%), Postives = 111/277 (40.07%), Query Frame = 0


Query: 42  IDEVFNQMEK-LKLVEEGR-VVEVEDNDIDESDRDFKGSIACKILTSKYISSEVFMHFMP 101
           +DEV N +EK L L E+ R  ++V  NDID+     K S+  K+LT+   + E F   M 
Sbjct: 1   MDEVINSLEKTLILTEDERDAIQVRQNDIDDVGERLKMSLVGKVLTTTAFNREAFKQTML 60

Query: 102 KIWGLEGAVKMEKAEANIYLCKFR------------------------------------ 161
           KIW     V ++    N++L  F                                     
Sbjct: 61  KIWSTVREVVVKDIGENLFLFIFATEGDRLRVLRSGPWNFDKALVLLETPDGSIAPSKML 120

Query: 162 -KYA-------------------VALANSIGEFETAEVDENDKLQGETLRVKVKINCKEP 221
            KYA                     + NS G         + K  G  LR++V ++  +P
Sbjct: 121 LKYADFWIQVHNVPLSCMSTNLGRQIGNSFGRCLDVIEGMDGKCLGRFLRLRVSVDVSKP 180

Query: 222 LERGTNVKTGLMATKTWIPITYDKLPDFCYCCGKLGHVIQECEV--EGVENSNEKLFGIE 259
           L RG  + T       ++   Y++LP+FC+CCG+LGHV +EC    +  + ++EK +G  
Sbjct: 181 LRRGKKM-TLPSGNTVFVEFRYERLPEFCFCCGRLGHVFKECSFVDQAAKQADEKPYGSW 240

[Close]

BLAST of Lcy04g009420 vs. ExPASy TrEMBL
Match: Q2QQV8 (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g29700 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-12
Identity = 53/177 (29.94%), Postives = 84/177 (47.46%), Query Frame = 0


Query: 123 RKYAVALANSIGEFETAEVDENDKLQGETLRVKVKINCKEPLERGTNVKTGLMATKTWIP 182
           ++  +A+   +GEF T +++E+    G+ LR+K++I+ ++PL RG  +  G      W P
Sbjct: 37  KETGMAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCP 96

Query: 183 ITYDKLPDFCYCCGKLGHVIQECEVEGVENSNEKLFGIELRETRGSKGIYKGWKTENRDQ 242
           + Y+ LPDFCY CG +GH  + CE +  E     LF   LR         K W+  + D+
Sbjct: 97  LVYEFLPDFCYICGIVGHTEKLCEKKLAE-GEAPLFNKSLRFIPEQ----KRWEGGSSDK 156

Query: 243 TSRGRGKGRFQTEEEIISRMKSERIRDISGFGQETVPRESRPTWAKEMTGAGKGVEQ 300
           TS      RFQ + +                G  +      P+W KE+T   KG E+
Sbjct: 157 TS----GSRFQVQRK---------------SGASSCKGSDAPSWRKEITDGSKGKEK 189

[Close]

BLAST of Lcy04g009420 vs. NCBI nr
Match: KAA0046998.1 (reverse transcriptase [Cucumis melo var. makuwa] >TYK04784.1 reverse transcriptase [Cucumis melo var. makuwa])

HSP 1 Score: 90.1 bits (222), Expect = 3.8e-14
Identity = 48/106 (45.28%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 163 PLERGTNVKTGLMATKTWIPITYDKLPDFCYCCGKLGHVIQECEVEGVENSNEKLFGIEL 222
           P   GT  K G+MA + WIP++Y+KLPDFCY CG++GHV+QEC+  G +    + FG+ L
Sbjct: 37  PNVHGTIKKLGVMAKEKWIPVSYEKLPDFCYKCGRVGHVVQECKEVGDDGEEGQRFGVWL 96

Query: 223 RETRGSKGIYKGWKTENRDQ--TSRGRGKGRFQTEEEIISRMKSER 267
           R+++ S+ I KG + E R Q    RGRG+G+     E   R KS R
Sbjct: 97  RKSQTSQSISKGRREEVRSQFTIDRGRGEGK---GIEAFKRDKSSR 139

[Close]

BLAST of Lcy04g009420 vs. NCBI nr
Match: XP_035547259.1 (uncharacterized protein LOC118348856 [Juglans regia])

HSP 1 Score: 89.7 bits (221), Expect = 4.9e-14
Identity = 55/202 (27.23%), Postives = 93/202 (46.04%), Query Frame = 0


Query: 44  EVFNQMEKLKLVEEGRVVEVEDNDIDESDRDFKGSIACKILTSKYISSEVFMHFMPKIWG 103
           E   Q   L   E+G  + VE + ++ +    +  +   +LT +Y + E   + M K+W 
Sbjct: 6   EFLYQHLSLSEKEKGE-IHVESSLLESNITRGERCLVMSLLTDRYYNREALKNMMRKVWQ 65

Query: 104 LEGAVKMEKAEANIYLCKFRK-----------------YAVAL-------------ANSI 163
               V  +   +N++L +F                   Y V L              N I
Sbjct: 66  PACKVPFKDLGSNLFLVEFEDDRDKQRILWEGPWSFDCYLVLLKQLEGNYKGGRLIGNKI 125

Query: 164 GEFETAEVDENDKLQGETLRVKVKINCKEPLERGTNVKTGLMATKTWIPITYDKLPDFCY 216
           G  E  + ++++   GE LR++V++N  +PL RG  VK G   +  WI   Y++LP+FCY
Sbjct: 126 GIVEEVDGEQSEVAWGEYLRIRVRVNISQPLMRGITVKLGQFGS-VWIRFAYERLPNFCY 185

[Close]

BLAST of Lcy04g009420 vs. NCBI nr
Match: VVA32948.1 (PREDICTED: DUF4283 domain-containing [Prunus dulcis])

HSP 1 Score: 85.9 bits (211), Expect = 7.1e-13
Identity = 72/277 (25.99%), Postives = 111/277 (40.07%), Query Frame = 0


Query: 42  IDEVFNQMEK-LKLVEEGR-VVEVEDNDIDESDRDFKGSIACKILTSKYISSEVFMHFMP 101
           +DEV N +EK L L E+ R  ++V  NDID+     K S+  K+LT+   + E F   M 
Sbjct: 1   MDEVINSLEKTLILTEDERDAIQVRQNDIDDVGERLKMSLVGKVLTTTAFNREAFKQTML 60

Query: 102 KIWGLEGAVKMEKAEANIYLCKFR------------------------------------ 161
           KIW     V ++    N++L  F                                     
Sbjct: 61  KIWSTVREVVVKDIGENLFLFIFATEGDRLRVLRSGPWNFDKALVLLETPDGSIAPSKML 120

Query: 162 -KYA-------------------VALANSIGEFETAEVDENDKLQGETLRVKVKINCKEP 221
            KYA                     + NS G         + K  G  LR++V ++  +P
Sbjct: 121 LKYADFWIQVHNVPLSCMSTNLGRQIGNSFGRCLDVIEGMDGKCLGRFLRLRVSVDVSKP 180

Query: 222 LERGTNVKTGLMATKTWIPITYDKLPDFCYCCGKLGHVIQECEV--EGVENSNEKLFGIE 259
           L RG  + T       ++   Y++LP+FC+CCG+LGHV +EC    +  + ++EK +G  
Sbjct: 181 LRRGKKM-TLPSGNTVFVEFRYERLPEFCFCCGRLGHVFKECSFVDQAAKQADEKPYGSW 240

[Close]

BLAST of Lcy04g009420 vs. NCBI nr
Match: XP_039815069.1 (uncharacterized protein LOC120677956 [Panicum virgatum])

HSP 1 Score: 85.1 bits (209), Expect = 1.2e-12
Identity = 43/108 (39.81%), Postives = 61/108 (56.48%), Query Frame = 0


Query: 128 ALANSIGEFETAEVDENDKLQGETLRVKVKINCKEPLERGTNVKTGLMATKTWIPITYDK 187
           A+   IG F T ++DE+D   G  LR+KV+++ ++PL RG  V  G      W P+ Y+ 
Sbjct: 118 AIGEEIGTFMTMDLDEDDTAVGRYLRIKVRLDIRKPLMRGVMVYVGKEDKPLWCPVEYEY 177

Query: 188 LPDFCYCCGKLGHVIQECEVEGVENSNEKLFGIELRETRGSKGIYKGW 236
           LPDFCY CG +GH  + CEVE VE    + F   LR     K + +G+
Sbjct: 178 LPDFCYTCGIIGHTDKVCEVE-VERGETQQFSKYLRCMPERKRVEEGF 224

[Close]

BLAST of Lcy04g009420 vs. NCBI nr
Match: XP_015619246.1 (uncharacterized protein LOC107279669 [Oryza sativa Japonica Group])

HSP 1 Score: 84.3 bits (207), Expect = 2.1e-12
Identity = 53/177 (29.94%), Postives = 84/177 (47.46%), Query Frame = 0


Query: 123 RKYAVALANSIGEFETAEVDENDKLQGETLRVKVKINCKEPLERGTNVKTGLMATKTWIP 182
           ++  +A+   +GEF T +++E+    G+ LR+K++I+ ++PL RG  +  G      W P
Sbjct: 37  KETGMAIGREVGEFMTMDLEEDGSAVGQFLRIKIRIDIRKPLMRGVTLFVGADERPLWCP 96

Query: 183 ITYDKLPDFCYCCGKLGHVIQECEVEGVENSNEKLFGIELRETRGSKGIYKGWKTENRDQ 242
           + Y+ LPDFCY CG +GH  + CE +  E     LF   LR         K W+  + D+
Sbjct: 97  LVYEFLPDFCYICGIVGHTEKLCEKKLAE-GEAPLFNKSLRFIPEQ----KRWEGGSSDK 156

Query: 243 TSRGRGKGRFQTEEEIISRMKSERIRDISGFGQETVPRESRPTWAKEMTGAGKGVEQ 300
           TS      RFQ + +                G  +      P+W KE+T   KG E+
Sbjct: 157 TS----GSRFQVQRK---------------SGASSCKGSDAPSWRKEITDGSKGKEK 189

The following BLAST results are available for this feature:

BLAST of Lcy04g009420 vs.


Match Name	E-value	Identity	Description

BLAST of Lcy04g009420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LNB5	3.0e-17	54.65	CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G427330 P...	[more]
A0A5D3C0K2	1.8e-14	45.28	Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold68...	[more]
A0A6P9EID8	2.4e-14	27.23	uncharacterized protein LOC118348856 OS=Juglans regia OX=51240 GN=LOC118348856 P...	[more]
A0A5E4G034	3.4e-13	25.99	PREDICTED: DUF4283 domain-containing OS=Prunus dulcis OX=3755 GN=ALMOND_2B021569...	[more]
Q2QQV8	1.0e-12	29.94	Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica ...	[more]

BLAST of Lcy04g009420 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0046998.1	3.8e-14	45.28	reverse transcriptase [Cucumis melo var. makuwa] >TYK04784.1 reverse transcripta...	[more]
XP_035547259.1	4.9e-14	27.23	uncharacterized protein LOC118348856 [Juglans regia]	[more]
VVA32948.1	7.1e-13	25.99	PREDICTED: DUF4283 domain-containing [Prunus dulcis]	[more]
XP_039815069.1	1.2e-12	39.81	uncharacterized protein LOC120677956 [Panicum virgatum]	[more]
XP_015619246.1	2.1e-12	29.94	uncharacterized protein LOC107279669 [Oryza sativa Japonica Group]	[more]

BLAST of Lcy04g009420 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 161..206 e-value: 9.5E-8 score: 31.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 299..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..327
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 192..205 score: 9.30658

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g009420.1	Lcy04g009420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding