Lcy04g008490 (gene) Sponge gourd (P93075) v1

Overview


Name	Lcy04g008490
Type	gene
Organism	Luffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Description	wound-induced protein 1
Location	Chr04: 39483238 .. 39484044 (-)
RNA-Seq Expression	Lcy04g008490
Synteny	Lcy04g008490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGCTTTTCAGCTCAATCCCCTTTTCCTCAAACATGGATTCCAAATCCACCCACATTCCAAACCACTCTGAAATCACCGACTGCACTGATTCAGAGCACCAAAACAGAGCAACCGCCGAGGCCCTCTACAAATCCCTCGCCGCCGGCCGGACCGACGCGGTGGCCAAGTTCCTCGCCGGCGACCTCGAGTGGTGGTTCCACGGGCCGCCGCATTGCCAGTACATGATGCGGGTCCTGACCGGCGAGTCCAGCCACGGCGAGTTCCGGTTCGAGCCGAGGAGCATAACGGCGATCGGCGACTCTGTTATTGTGGCCGAAGGGTGGGAAGGGGCTCAGGCCTATTGGGTTCATGTTTGGACTTTGAAGGATGGGCTGATTACGCAGTTTAGAGAGTATTTCAATACGTGGCTTGTTGTGACGGATCTCCGGCCGGCGGCGTGGGAGGAGGTCCGCCACGATGGGCTGACGGTATGGCGGAGCCACCCCCGGGATCTGTTTCGCCGCTCGTTGCCGGCGATTGTTCTGGCGCTGTAGTTTGTCGAAAGCGTTTGTGGGCGGTGAACAATGTAATGTGTTTTTTAGAACTTTTTTTTTTCTTTAATTGGAAGAAATTTTAGAACTTAATTATCTAAGAGAATTATGGGGGAAATTAAGTTGTGTGGATTATGGATGAGCATTCCAAATCTCAAAGTGTAAATTGCTTTTATGTTGGGAGAAGAAAAAAAAAGAGACATTTCTATGTGAAATAATCCGTTCATGTACCGTTTTTCTTTCTCGAGATGTCTATTTGAGCATACTTCTTCAA

mRNA sequence

CAAAGCTTTTCAGCTCAATCCCCTTTTCCTCAAACATGGATTCCAAATCCACCCACATTCCAAACCACTCTGAAATCACCGACTGCACTGATTCAGAGCACCAAAACAGAGCAACCGCCGAGGCCCTCTACAAATCCCTCGCCGCCGGCCGGACCGACGCGGTGGCCAAGTTCCTCGCCGGCGACCTCGAGTGGTGGTTCCACGGGCCGCCGCATTGCCAGTACATGATGCGGGTCCTGACCGGCGAGTCCAGCCACGGCGAGTTCCGGTTCGAGCCGAGGAGCATAACGGCGATCGGCGACTCTGTTATTGTGGCCGAAGGGTGGGAAGGGGCTCAGGCCTATTGGGTTCATGTTTGGACTTTGAAGGATGGGCTGATTACGCAGTTTAGAGAGTATTTCAATACGTGGCTTGTTGTGACGGATCTCCGGCCGGCGGCGTGGGAGGAGGTCCGCCACGATGGGCTGACGGTATGGCGGAGCCACCCCCGGGATCTGTTTCGCCGCTCGTTGCCGGCGATTGTTCTGGCGCTGTAGTTTGTCGAAAGCGTTTGTGGGCGGTGAACAATGTAATGTGTTTTTTAGAACTTTTTTTTTTCTTTAATTGGAAGAAATTTTAGAACTTAATTATCTAAGAGAATTATGGGGGAAATTAAGTTGTGTGGATTATGGATGAGCATTCCAAATCTCAAAGTGTAAATTGCTTTTATGTTGGGAGAAGAAAAAAAAAGAGACATTTCTATGTGAAATAATCCGTTCATGTACCGTTTTTCTTTCTCGAGATGTCTATTTGAGCATACTTCTTCAA

Coding sequence (CDS)

ATGGATTCCAAATCCACCCACATTCCAAACCACTCTGAAATCACCGACTGCACTGATTCAGAGCACCAAAACAGAGCAACCGCCGAGGCCCTCTACAAATCCCTCGCCGCCGGCCGGACCGACGCGGTGGCCAAGTTCCTCGCCGGCGACCTCGAGTGGTGGTTCCACGGGCCGCCGCATTGCCAGTACATGATGCGGGTCCTGACCGGCGAGTCCAGCCACGGCGAGTTCCGGTTCGAGCCGAGGAGCATAACGGCGATCGGCGACTCTGTTATTGTGGCCGAAGGGTGGGAAGGGGCTCAGGCCTATTGGGTTCATGTTTGGACTTTGAAGGATGGGCTGATTACGCAGTTTAGAGAGTATTTCAATACGTGGCTTGTTGTGACGGATCTCCGGCCGGCGGCGTGGGAGGAGGTCCGCCACGATGGGCTGACGGTATGGCGGAGCCACCCCCGGGATCTGTTTCGCCGCTCGTTGCCGGCGATTGTTCTGGCGCTGTAG

Protein sequence

MDSKSTHIPNHSEITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHGPPHCQYMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAYWVHVWTLKDGLITQFREYFNTWLVVTDLRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL

Homology

[Close]

BLAST of Lcy04g008490 vs. ExPASy Swiss-Prot
Match: Q94AK6 (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 0


Query: 65  MRVLTG--ESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAY-WVHVWTLKDGLITQFREY 124
           MRVLTG    S   F F P S+ + G S ++AEG + A +  W+H WT+ +G+ITQ REY
Sbjct: 1   MRVLTGGVSPSSSSFEFVPLSVVSFG-STVIAEGCDAATSISWIHAWTVANGIITQVREY 60

Query: 125 FNTWLVVTDL-------RPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
            NT L VT +       R A      H   +VW S       + +P +VLA+
Sbjct: 61  SNTSLTVTRIGNVVAGRRSAEIAPPSHCS-SVWESQFSGRAGKPVPGLVLAI 110

[Close]

BLAST of Lcy04g008490 vs. ExPASy Swiss-Prot
Match: P20144 (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10
Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 0


Query: 65  MRVLTGES--SHGEFRFEPRSITAIGDSVIVAEGWEGAQAY-WVHVWTLKDGLITQFREY 124
           M++LTG +   +  F+F  ++I   G SV++ EG +  ++  WVH WT+ DG+ITQ REY
Sbjct: 1   MQILTGTAKFDNASFQFLHKTIDVFG-SVVLVEGCDPTRSITWVHAWTVTDGVITQVREY 60

Query: 125 FNTWLVVTDLRPAAWEEVRH-DGLTVWRSHPRDLFRRSLPAIVLAL 167
           FNT L VT    +    +      +VW S   +   +S+P +VLAL
Sbjct: 61  FNTSLTVTRFGKSDISSITTLHCPSVWESSLPNRVGKSVPGLVLAL 105

[Close]

BLAST of Lcy04g008490 vs. ExPASy TrEMBL
Match: A0A6J1IMA8 (wound-induced protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111478330 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 148/164 (90.24%), Postives = 152/164 (92.68%), Query Frame = 0


Query: 3   SKSTHIPNHSEITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHGPPHCQ 62
           S STHI  HSEIT  TDSEHQNRATA+ALYKSLAAGRTDAVAKFLA DLEWWFHGPPHCQ
Sbjct: 5   STSTHILKHSEITHSTDSEHQNRATADALYKSLAAGRTDAVAKFLATDLEWWFHGPPHCQ 64

Query: 63  YMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAYWVHVWTLKDGLITQFREYF 122
           YMMRVLTGESSH EFRFEPRSITAIGDSVIVAEGWEGAQ YWVHVWTLKDG+ITQFREYF
Sbjct: 65  YMMRVLTGESSHAEFRFEPRSITAIGDSVIVAEGWEGAQVYWVHVWTLKDGVITQFREYF 124

Query: 123 NTWLVVTDLRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
           NTWLVV DLR  AWEEVRHDGLTVW+SHPRDLF RSLPAI+LAL
Sbjct: 125 NTWLVVADLRQPAWEEVRHDGLTVWQSHPRDLFHRSLPAIMLAL 168

[Close]

BLAST of Lcy04g008490 vs. ExPASy TrEMBL
Match: A0A6J1GE13 (wound-induced protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111453098 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80
Identity = 144/164 (87.80%), Postives = 149/164 (90.85%), Query Frame = 0


Query: 3   SKSTHIPNHSEITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHGPPHCQ 62
           S STHI  HSEIT  T+SEHQNRATA+ALYKSLAAGRTDAVAKFLA DLEWWFHGPPHCQ
Sbjct: 5   STSTHILKHSEITHSTESEHQNRATADALYKSLAAGRTDAVAKFLATDLEWWFHGPPHCQ 64

Query: 63  YMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAYWVHVWTLKDGLITQFREYF 122
           YMMRVLTGESSH EFRFEPRSIT IGDSVIVAEGWEGAQ YWVHVWTLKDG+ITQFREYF
Sbjct: 65  YMMRVLTGESSHAEFRFEPRSITEIGDSVIVAEGWEGAQVYWVHVWTLKDGVITQFREYF 124

Query: 123 NTWLVVTDLRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
           NTWLVV DLR  AWEEVRHDGLTVW+SHPRDLF RSLP I+ AL
Sbjct: 125 NTWLVVADLRQPAWEEVRHDGLTVWQSHPRDLFHRSLPVIMFAL 168

[Close]

BLAST of Lcy04g008490 vs. ExPASy TrEMBL
Match: A0A5D3CHY0 (Wound-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00580 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.5e-78
Identity = 143/169 (84.62%), Postives = 152/169 (89.94%), Query Frame = 0


Query: 1   MDS---KSTHIPNHSEITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHG 60
           MDS    STHI  H++IT  +++E +NRATAE LYKSLAAGRT AVAKFLA DLEWWFHG
Sbjct: 1   MDSTSISSTHIIKHTQIT-LSETEQRNRATAETLYKSLAAGRTHAVAKFLAADLEWWFHG 60

Query: 61  PPHCQYMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAYWVHVWTLKDGLITQ 120
           PPHCQYMMR+LTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQ YWVHVWTLKDGLITQ
Sbjct: 61  PPHCQYMMRILTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQVYWVHVWTLKDGLITQ 120

Query: 121 FREYFNTWLVVTDLRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
           FREYFNTWLVVTDLR  AWEE+RHDG+TVWRS PRDLF RSLPAIVLAL
Sbjct: 121 FREYFNTWLVVTDLRQPAWEEIRHDGMTVWRSQPRDLFHRSLPAIVLAL 168

[Close]

BLAST of Lcy04g008490 vs. ExPASy TrEMBL
Match: A0A1S3CLI3 (wound-induced protein 1 OS=Cucumis melo OX=3656 GN=LOC103502179 PE=4 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 3.5e-78
Identity = 143/169 (84.62%), Postives = 152/169 (89.94%), Query Frame = 0


Query: 1   MDS---KSTHIPNHSEITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHG 60
           MDS    STHI  H++IT  +++E +NRATAE LYKSLAAGRT AVAKFLA DLEWWFHG
Sbjct: 1   MDSTSISSTHIIKHTQIT-LSETEQRNRATAETLYKSLAAGRTHAVAKFLAADLEWWFHG 60

Query: 61  PPHCQYMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAYWVHVWTLKDGLITQ 120
           PPHCQYMMR+LTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQ YWVHVWTLKDGLITQ
Sbjct: 61  PPHCQYMMRILTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQVYWVHVWTLKDGLITQ 120

Query: 121 FREYFNTWLVVTDLRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
           FREYFNTWLVVTDLR  AWEE+RHDG+TVWRS PRDLF RSLPAIVLAL
Sbjct: 121 FREYFNTWLVVTDLRQPAWEEIRHDGMTVWRSQPRDLFHRSLPAIVLAL 168

[Close]

BLAST of Lcy04g008490 vs. ExPASy TrEMBL
Match: A0A0A0L1G7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G325520 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 141/169 (83.43%), Postives = 150/169 (88.76%), Query Frame = 0


Query: 1   MDSKST---HIPNHSEITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHG 60
           MDS ST   HI  H++I   +++E +NRATAE LYKSLA GRT AVAKFLA DLEWWFHG
Sbjct: 1   MDSISTSSAHILKHTQIA-LSETEQRNRATAETLYKSLATGRTHAVAKFLAPDLEWWFHG 60

Query: 61  PPHCQYMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAYWVHVWTLKDGLITQ 120
           PPHCQYMMRVLTG+SSHGEFRFEPRSITAIGDSV+VAEGWEGAQ YWVHVWTLKDGLITQ
Sbjct: 61  PPHCQYMMRVLTGDSSHGEFRFEPRSITAIGDSVVVAEGWEGAQVYWVHVWTLKDGLITQ 120

Query: 121 FREYFNTWLVVTDLRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
           FREYFNTWLVVTDLR  AWEE+RHDGLTVWRS PRDLF RSLPAIVLAL
Sbjct: 121 FREYFNTWLVVTDLRQPAWEEIRHDGLTVWRSQPRDLFHRSLPAIVLAL 168

[Close]

BLAST of Lcy04g008490 vs. NCBI nr
Match: XP_022978301.1 (wound-induced protein 1 [Cucurbita maxima])

HSP 1 Score: 315.5 bits (807), Expect = 2.8e-82
Identity = 148/164 (90.24%), Postives = 152/164 (92.68%), Query Frame = 0


Query: 3   SKSTHIPNHSEITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHGPPHCQ 62
           S STHI  HSEIT  TDSEHQNRATA+ALYKSLAAGRTDAVAKFLA DLEWWFHGPPHCQ
Sbjct: 5   STSTHILKHSEITHSTDSEHQNRATADALYKSLAAGRTDAVAKFLATDLEWWFHGPPHCQ 64

Query: 63  YMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAYWVHVWTLKDGLITQFREYF 122
           YMMRVLTGESSH EFRFEPRSITAIGDSVIVAEGWEGAQ YWVHVWTLKDG+ITQFREYF
Sbjct: 65  YMMRVLTGESSHAEFRFEPRSITAIGDSVIVAEGWEGAQVYWVHVWTLKDGVITQFREYF 124

Query: 123 NTWLVVTDLRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
           NTWLVV DLR  AWEEVRHDGLTVW+SHPRDLF RSLPAI+LAL
Sbjct: 125 NTWLVVADLRQPAWEEVRHDGLTVWQSHPRDLFHRSLPAIMLAL 168

[Close]

BLAST of Lcy04g008490 vs. NCBI nr
Match: XP_023544894.1 (wound-induced protein 1 [Cucurbita pepo subsp. pepo] >KAG6603551.1 Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033740.1 Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.0 bits (798), Expect = 3.1e-81
Identity = 146/164 (89.02%), Postives = 151/164 (92.07%), Query Frame = 0


Query: 3   SKSTHIPNHSEITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHGPPHCQ 62
           S STHI  HSEIT  T+SEHQNRATA+ALYKSLAAGRTDAVAKFLA DLEWWFHGPPHCQ
Sbjct: 5   STSTHILKHSEITHSTESEHQNRATADALYKSLAAGRTDAVAKFLATDLEWWFHGPPHCQ 64

Query: 63  YMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAYWVHVWTLKDGLITQFREYF 122
           YMMRVLTGESSH EFRFEPRSIT IGDSVIVAEGWEGAQ YWVHVWTLKDG+ITQFREYF
Sbjct: 65  YMMRVLTGESSHAEFRFEPRSITEIGDSVIVAEGWEGAQVYWVHVWTLKDGVITQFREYF 124

Query: 123 NTWLVVTDLRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
           NTWLVV DLR  AWEEVRHDGLTVW+SHPRDLF RSLPAI+LAL
Sbjct: 125 NTWLVVADLRQPAWEEVRHDGLTVWQSHPRDLFHRSLPAIMLAL 168

[Close]

BLAST of Lcy04g008490 vs. NCBI nr
Match: XP_038883007.1 (wound-induced protein 1 [Benincasa hispida])

HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80
Identity = 150/169 (88.76%), Postives = 155/169 (91.72%), Query Frame = 0


Query: 1   MDSKS---THIPNHSEITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHG 60
           MDS S   THI  HSEIT  +++E QNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHG
Sbjct: 23  MDSTSPSTTHILKHSEITH-SEAEQQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHG 82

Query: 61  PPHCQYMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAYWVHVWTLKDGLITQ 120
           PPHCQYMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQ YWVHVWTLKDGLITQ
Sbjct: 83  PPHCQYMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQVYWVHVWTLKDGLITQ 142

Query: 121 FREYFNTWLVVTDLRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
           FREYFNTWLVVTDLR  AW+EVRHDGLTVW+SHPRDL  RSLPAIVLAL
Sbjct: 143 FREYFNTWLVVTDLRQPAWQEVRHDGLTVWQSHPRDLLHRSLPAIVLAL 190

[Close]

BLAST of Lcy04g008490 vs. NCBI nr
Match: XP_022949814.1 (wound-induced protein 1 [Cucurbita moschata])

HSP 1 Score: 308.9 bits (790), Expect = 2.6e-80
Identity = 144/164 (87.80%), Postives = 149/164 (90.85%), Query Frame = 0


Query: 3   SKSTHIPNHSEITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHGPPHCQ 62
           S STHI  HSEIT  T+SEHQNRATA+ALYKSLAAGRTDAVAKFLA DLEWWFHGPPHCQ
Sbjct: 5   STSTHILKHSEITHSTESEHQNRATADALYKSLAAGRTDAVAKFLATDLEWWFHGPPHCQ 64

Query: 63  YMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAYWVHVWTLKDGLITQFREYF 122
           YMMRVLTGESSH EFRFEPRSIT IGDSVIVAEGWEGAQ YWVHVWTLKDG+ITQFREYF
Sbjct: 65  YMMRVLTGESSHAEFRFEPRSITEIGDSVIVAEGWEGAQVYWVHVWTLKDGVITQFREYF 124

Query: 123 NTWLVVTDLRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
           NTWLVV DLR  AWEEVRHDGLTVW+SHPRDLF RSLP I+ AL
Sbjct: 125 NTWLVVADLRQPAWEEVRHDGLTVWQSHPRDLFHRSLPVIMFAL 168

[Close]

BLAST of Lcy04g008490 vs. NCBI nr
Match: XP_008464249.1 (PREDICTED: wound-induced protein 1 [Cucumis melo] >KAA0065331.1 wound-induced protein 1 [Cucumis melo var. makuwa] >TYK10970.1 wound-induced protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 300.8 bits (769), Expect = 7.1e-78
Identity = 143/169 (84.62%), Postives = 152/169 (89.94%), Query Frame = 0


Query: 1   MDS---KSTHIPNHSEITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHG 60
           MDS    STHI  H++IT  +++E +NRATAE LYKSLAAGRT AVAKFLA DLEWWFHG
Sbjct: 1   MDSTSISSTHIIKHTQIT-LSETEQRNRATAETLYKSLAAGRTHAVAKFLAADLEWWFHG 60

Query: 61  PPHCQYMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAYWVHVWTLKDGLITQ 120
           PPHCQYMMR+LTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQ YWVHVWTLKDGLITQ
Sbjct: 61  PPHCQYMMRILTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQVYWVHVWTLKDGLITQ 120

Query: 121 FREYFNTWLVVTDLRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
           FREYFNTWLVVTDLR  AWEE+RHDG+TVWRS PRDLF RSLPAIVLAL
Sbjct: 121 FREYFNTWLVVTDLRQPAWEEIRHDGMTVWRSQPRDLFHRSLPAIVLAL 168

[Close]

BLAST of Lcy04g008490 vs. TAIR 10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein )

HSP 1 Score: 172.6 bits (436), Expect = 2.7e-43
Identity = 84/159 (52.83%), Postives = 106/159 (66.67%), Query Frame = 0


Query: 13  EITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHGPPHCQYMMRVLTGES 72
           EI+     E +N+ T E LYK+L  G T  V K +A D+EWWFHGP  CQ+MMR+LTGE 
Sbjct: 7   EISTRLTPEMKNQGTIELLYKALQQGDTSTVTKVVASDVEWWFHGPHDCQHMMRLLTGEP 66

Query: 73  SHG-EFRFEPRSITAI--GDSVIVAEGWEGAQAYWVHVWTLKDGLITQFREYFNTWLVVT 132
                FRFEP S+  +  G   ++AEGWEG++ YWVHVW LKDG++T+ REYFNTWL VT
Sbjct: 67  PRQVSFRFEPSSVQVVVPGHDCVIAEGWEGSRVYWVHVWKLKDGVVTELREYFNTWLTVT 126

Query: 133 D--LRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
           D  L    W+  R    TVW S PRDL R SLP+++LA+
Sbjct: 127 DYSLGAVGWDMGR---CTVWESVPRDLARGSLPSLLLAI 162

[Close]

BLAST of Lcy04g008490 vs. TAIR 10
Match: AT3G10985.1 (senescence associated gene 20 )

HSP 1 Score: 67.8 bits (164), Expect = 9.5e-12
Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 0


Query: 65  MRVLTG--ESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAY-WVHVWTLKDGLITQFREY 124
           MRVLTG    S   F F P S+ + G S ++AEG + A +  W+H WT+ +G+ITQ REY
Sbjct: 1   MRVLTGGVSPSSSSFEFVPLSVVSFG-STVIAEGCDAATSISWIHAWTVANGIITQVREY 60

Query: 125 FNTWLVVTDL-------RPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL 167
            NT L VT +       R A      H   +VW S       + +P +VLA+
Sbjct: 61  SNTSLTVTRIGNVVAGRRSAEIAPPSHCS-SVWESQFSGRAGKPVPGLVLAI 110

The following BLAST results are available for this feature:

BLAST of Lcy04g008490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94AK6	1.3e-10	38.39	Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1	[more]
P20144	1.7e-10	37.74	Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1	[more]

BLAST of Lcy04g008490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IMA8	1.4e-82	90.24	wound-induced protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111478330 PE=4 SV=1	[more]
A0A6J1GE13	1.3e-80	87.80	wound-induced protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111453098 PE=4 SV=1	[more]
A0A5D3CHY0	3.5e-78	84.62	Wound-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CLI3	3.5e-78	84.62	wound-induced protein 1 OS=Cucumis melo OX=3656 GN=LOC103502179 PE=4 SV=1	[more]
A0A0A0L1G7	1.9e-76	83.43	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G325520 PE=4 SV=1	[more]

BLAST of Lcy04g008490 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978301.1	2.8e-82	90.24	wound-induced protein 1 [Cucurbita maxima]	[more]
XP_023544894.1	3.1e-81	89.02	wound-induced protein 1 [Cucurbita pepo subsp. pepo] >KAG6603551.1 Senescence as...	[more]
XP_038883007.1	1.2e-80	88.76	wound-induced protein 1 [Benincasa hispida]	[more]
XP_022949814.1	2.6e-80	87.80	wound-induced protein 1 [Cucurbita moschata]	[more]
XP_008464249.1	7.1e-78	84.62	PREDICTED: wound-induced protein 1 [Cucumis melo] >KAA0065331.1 wound-induced pr...	[more]

BLAST of Lcy04g008490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01740.1	2.7e-43	52.83	Nuclear transport factor 2 (NTF2) family protein	[more]
AT3G10985.1	9.5e-12	38.39	senescence associated gene 20	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.50		coord: 10..141 e-value: 2.3E-17 score: 65.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR33703:SF16	OS05G0342100 PROTEIN	coord: 20..166
IPR009798	Wound-induced protein Wun1-like	PFAM	PF07107	WI12	coord: 65..166 e-value: 2.8E-31 score: 107.9
IPR009798	Wound-induced protein Wun1-like	PANTHER	PTHR33703	OS07G0691300 PROTEIN	coord: 20..166
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 21..130

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lcy04g008490.1	Lcy04g008490.1	mRNA