Lcy04g008490 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAGCTTTTCAGCTCAATCCCCTTTTCCTCAAACATGGATTCCAAATCCACCCACATTCCAAACCACTCTGAAATCACCGACTGCACTGATTCAGAGCACCAAAACAGAGCAACCGCCGAGGCCCTCTACAAATCCCTCGCCGCCGGCCGGACCGACGCGGTGGCCAAGTTCCTCGCCGGCGACCTCGAGTGGTGGTTCCACGGGCCGCCGCATTGCCAGTACATGATGCGGGTCCTGACCGGCGAGTCCAGCCACGGCGAGTTCCGGTTCGAGCCGAGGAGCATAACGGCGATCGGCGACTCTGTTATTGTGGCCGAAGGGTGGGAAGGGGCTCAGGCCTATTGGGTTCATGTTTGGACTTTGAAGGATGGGCTGATTACGCAGTTTAGAGAGTATTTCAATACGTGGCTTGTTGTGACGGATCTCCGGCCGGCGGCGTGGGAGGAGGTCCGCCACGATGGGCTGACGGTATGGCGGAGCCACCCCCGGGATCTGTTTCGCCGCTCGTTGCCGGCGATTGTTCTGGCGCTGTAGTTTGTCGAAAGCGTTTGTGGGCGGTGAACAATGTAATGTGTTTTTTAGAACTTTTTTTTTTCTTTAATTGGAAGAAATTTTAGAACTTAATTATCTAAGAGAATTATGGGGGAAATTAAGTTGTGTGGATTATGGATGAGCATTCCAAATCTCAAAGTGTAAATTGCTTTTATGTTGGGAGAAGAAAAAAAAAGAGACATTTCTATGTGAAATAATCCGTTCATGTACCGTTTTTCTTTCTCGAGATGTCTATTTGAGCATACTTCTTCAA CAAAGCTTTTCAGCTCAATCCCCTTTTCCTCAAACATGGATTCCAAATCCACCCACATTCCAAACCACTCTGAAATCACCGACTGCACTGATTCAGAGCACCAAAACAGAGCAACCGCCGAGGCCCTCTACAAATCCCTCGCCGCCGGCCGGACCGACGCGGTGGCCAAGTTCCTCGCCGGCGACCTCGAGTGGTGGTTCCACGGGCCGCCGCATTGCCAGTACATGATGCGGGTCCTGACCGGCGAGTCCAGCCACGGCGAGTTCCGGTTCGAGCCGAGGAGCATAACGGCGATCGGCGACTCTGTTATTGTGGCCGAAGGGTGGGAAGGGGCTCAGGCCTATTGGGTTCATGTTTGGACTTTGAAGGATGGGCTGATTACGCAGTTTAGAGAGTATTTCAATACGTGGCTTGTTGTGACGGATCTCCGGCCGGCGGCGTGGGAGGAGGTCCGCCACGATGGGCTGACGGTATGGCGGAGCCACCCCCGGGATCTGTTTCGCCGCTCGTTGCCGGCGATTGTTCTGGCGCTGTAGTTTGTCGAAAGCGTTTGTGGGCGGTGAACAATGTAATGTGTTTTTTAGAACTTTTTTTTTTCTTTAATTGGAAGAAATTTTAGAACTTAATTATCTAAGAGAATTATGGGGGAAATTAAGTTGTGTGGATTATGGATGAGCATTCCAAATCTCAAAGTGTAAATTGCTTTTATGTTGGGAGAAGAAAAAAAAAGAGACATTTCTATGTGAAATAATCCGTTCATGTACCGTTTTTCTTTCTCGAGATGTCTATTTGAGCATACTTCTTCAA ATGGATTCCAAATCCACCCACATTCCAAACCACTCTGAAATCACCGACTGCACTGATTCAGAGCACCAAAACAGAGCAACCGCCGAGGCCCTCTACAAATCCCTCGCCGCCGGCCGGACCGACGCGGTGGCCAAGTTCCTCGCCGGCGACCTCGAGTGGTGGTTCCACGGGCCGCCGCATTGCCAGTACATGATGCGGGTCCTGACCGGCGAGTCCAGCCACGGCGAGTTCCGGTTCGAGCCGAGGAGCATAACGGCGATCGGCGACTCTGTTATTGTGGCCGAAGGGTGGGAAGGGGCTCAGGCCTATTGGGTTCATGTTTGGACTTTGAAGGATGGGCTGATTACGCAGTTTAGAGAGTATTTCAATACGTGGCTTGTTGTGACGGATCTCCGGCCGGCGGCGTGGGAGGAGGTCCGCCACGATGGGCTGACGGTATGGCGGAGCCACCCCCGGGATCTGTTTCGCCGCTCGTTGCCGGCGATTGTTCTGGCGCTGTAG MDSKSTHIPNHSEITDCTDSEHQNRATAEALYKSLAAGRTDAVAKFLAGDLEWWFHGPPHCQYMMRVLTGESSHGEFRFEPRSITAIGDSVIVAEGWEGAQAYWVHVWTLKDGLITQFREYFNTWLVVTDLRPAAWEEVRHDGLTVWRSHPRDLFRRSLPAIVLAL Homology
BLAST of Lcy04g008490 vs. ExPASy Swiss-Prot
Match: Q94AK6 (Senescence associated gene 20 OS=Arabidopsis thaliana OX=3702 GN=SAG20 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10 Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 0
BLAST of Lcy04g008490 vs. ExPASy Swiss-Prot
Match: P20144 (Wound-induced protein 1 OS=Solanum tuberosum OX=4113 GN=WUN1 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.7e-10 Identity = 40/106 (37.74%), Postives = 61/106 (57.55%), Query Frame = 0
BLAST of Lcy04g008490 vs. ExPASy TrEMBL
Match: A0A6J1IMA8 (wound-induced protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111478330 PE=4 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82 Identity = 148/164 (90.24%), Postives = 152/164 (92.68%), Query Frame = 0
BLAST of Lcy04g008490 vs. ExPASy TrEMBL
Match: A0A6J1GE13 (wound-induced protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111453098 PE=4 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 1.3e-80 Identity = 144/164 (87.80%), Postives = 149/164 (90.85%), Query Frame = 0
BLAST of Lcy04g008490 vs. ExPASy TrEMBL
Match: A0A5D3CHY0 (Wound-induced protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold107G00580 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.5e-78 Identity = 143/169 (84.62%), Postives = 152/169 (89.94%), Query Frame = 0
BLAST of Lcy04g008490 vs. ExPASy TrEMBL
Match: A0A1S3CLI3 (wound-induced protein 1 OS=Cucumis melo OX=3656 GN=LOC103502179 PE=4 SV=1) HSP 1 Score: 300.8 bits (769), Expect = 3.5e-78 Identity = 143/169 (84.62%), Postives = 152/169 (89.94%), Query Frame = 0
BLAST of Lcy04g008490 vs. ExPASy TrEMBL
Match: A0A0A0L1G7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G325520 PE=4 SV=1) HSP 1 Score: 295.0 bits (754), Expect = 1.9e-76 Identity = 141/169 (83.43%), Postives = 150/169 (88.76%), Query Frame = 0
BLAST of Lcy04g008490 vs. NCBI nr
Match: XP_022978301.1 (wound-induced protein 1 [Cucurbita maxima]) HSP 1 Score: 315.5 bits (807), Expect = 2.8e-82 Identity = 148/164 (90.24%), Postives = 152/164 (92.68%), Query Frame = 0
BLAST of Lcy04g008490 vs. NCBI nr
Match: XP_023544894.1 (wound-induced protein 1 [Cucurbita pepo subsp. pepo] >KAG6603551.1 Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033740.1 Senescence associated protein 20, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 312.0 bits (798), Expect = 3.1e-81 Identity = 146/164 (89.02%), Postives = 151/164 (92.07%), Query Frame = 0
BLAST of Lcy04g008490 vs. NCBI nr
Match: XP_038883007.1 (wound-induced protein 1 [Benincasa hispida]) HSP 1 Score: 310.1 bits (793), Expect = 1.2e-80 Identity = 150/169 (88.76%), Postives = 155/169 (91.72%), Query Frame = 0
BLAST of Lcy04g008490 vs. NCBI nr
Match: XP_022949814.1 (wound-induced protein 1 [Cucurbita moschata]) HSP 1 Score: 308.9 bits (790), Expect = 2.6e-80 Identity = 144/164 (87.80%), Postives = 149/164 (90.85%), Query Frame = 0
BLAST of Lcy04g008490 vs. NCBI nr
Match: XP_008464249.1 (PREDICTED: wound-induced protein 1 [Cucumis melo] >KAA0065331.1 wound-induced protein 1 [Cucumis melo var. makuwa] >TYK10970.1 wound-induced protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 300.8 bits (769), Expect = 7.1e-78 Identity = 143/169 (84.62%), Postives = 152/169 (89.94%), Query Frame = 0
BLAST of Lcy04g008490 vs. TAIR 10
Match: AT5G01740.1 (Nuclear transport factor 2 (NTF2) family protein ) HSP 1 Score: 172.6 bits (436), Expect = 2.7e-43 Identity = 84/159 (52.83%), Postives = 106/159 (66.67%), Query Frame = 0
BLAST of Lcy04g008490 vs. TAIR 10
Match: AT3G10985.1 (senescence associated gene 20 ) HSP 1 Score: 67.8 bits (164), Expect = 9.5e-12 Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
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