Lcy04g008070 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g008070
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
Descriptionprotein RETICULATA-RELATED 3, chloroplastic
LocationChr04: 38821299 .. 38823323 (+)
RNA-Seq ExpressionLcy04g008070
SyntenyLcy04g008070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCATTCCAACAACAAAACCTCGTTAGGGTTTACAGAGAGAGAAAGAAAAAGCGAAAACAGAGATTTAACAACTGACAATTAACGCTTCATCTATATATACATACATTCACACATATATATATAGATTCCTCTGTTCAACAGTGCCGTTTTTGACCCGTTTCGGCCACCTACGCCACCCTCGATGCCCTCTCCATTTTCGGCTGCGACAATTCTCCACCCTTCTGTTTCTTCGTTTTAGTTCGTGTTTCTTCTCTCTCTCAAGGTATAATTCCAACTTCCCATCATTTGTTTTCATGTATTTTATGTTGATCGTGTGATCTCTGTTCTGTATCTGCCTGTTTCTTCCCCCATTTTGATCCATTTTTCCGCTTCAGATCTGGTGAATACTTGTTGAATTGGGTTCTTTTTCTTTTTGTCCTTGGTGGGTTTGTGATCTTTTCCTGAATTTGTGTTTGTTGCATGTTTTTTCAGATTTGAGGAATTGGGTAGGTTTGTTTTAAGGGATTTTTGTTGAACTATGGCGGCCATGGCTCAGCTGCATTGCTCCATTCGCCCTAGGCATTACTATAATGTTCCCAGTAGCCATGCTTTTAACGACACTCCGGCTTTCTCTTTTCTATCTGATTCGTCGGCGGTTGAATCGAGGAGCCGATCTCTTTCTCTTTTTAATGCGGATTTAACGAGGCCTAGTTTTTTGGCGAAATCTGAACTTTCTCTTGCTGGTGGCGACGGTGGGAATGGCGTTGGCCGCGGCGGAGGAGGCGGCGGTGGTGGTGATAGTGGTGGTTGGAGCGATGATCGGGCTCATGGGGATGATGATTCTTCAAGTTTTGGAGTGTTTGGATTGTTTCTCAAAGGGTGGAGATCCAGAGTTGCTGCGGATCCACAGTTTCCTTTCAAGGTTCTGATGGAGGAACTGGTTGGTGTGAGTGCTTGTGTTCTTGGAGACATGGCGTCCCGCCCCAATTTCGGTCTTAACGAGCTCGACTTCGTCTTCTCCACCCTCGTTGTCGGATCTATACTGAATTTCACTCTCATGTATCTTTTGGCTCCCACTGCATCAGCTGGTGCAGCAGCCAAGCAGCTTCCTGCGATCTTTGCGAGTTGCCCCACCAGCCATATGTTCGAACCTGGTGCATTCACGGTCTTGGATCGATTGGGAACCTTTGTTTACAAAGGAACCGTCTTCGCTGCAGTCGGACTAGCAGCCGGGCTCGTCGGGACTGCACTCTCAAATGGCTTGATCAAACTGAGGAAGAAGATGGATCCCGAATTCGAGACGCCGAACAAGCCACCTCCCACATTGTTGAACGCCATGACTTGGGCAATTCACATGGGGGTCAGCAGTAACTTGAGATACCAAACTTTGAACGGAATTGAATTCGTGTTGGCCAATGGGCTTTCCCCTCTGGCATTCAAGAGCTCTGTGGTGGTGTTGAGATGTTTGAACAATGTTCTCGGAGGCATGTCGTTCGTCATCCTTGCACGAATGACAGGTTCACAGAGCATCGAGGAGCCGAAGCCAGCAGCAGTAGAGTTGGATTCTGCTGATGAGAAAGAGAAGCTGTTGGAGGGAGACAAAGATGAGGAGTTAAGGAGCAACCAGACAGCTTACAAGTGAGAATCTATGAATAATTGAGATTCAAAGTAAGGCCATTCTGCAAGAACTTGGTATCATTTTGGCTGTGTCTCCATTGTTAATATATGCTCCATGCTCTGTGACTAAGGATCATTTTACTTTGTTTGTAACAATAAAGAAGCTCAAGTGGTGTGGGGATTCTGAAATGTTAGGTGTTATTATGAGGCTTTGCTAATAGTTTTCTTGGAAACTCAATGAGTTGCTTTATGGGCCAAAAATGTGTTTGTCAAAAAAGTCTCTCTGGATGTGAATTTTGAGAGCTGACTCTAAAATTTTGTTACCAAGTTTTAGCTGACTAAAGCAACAAATCCCTTTTTTCCTGTAAAGTGAACATGTTGGTTGGAATTCGAACCTGTTAACCTTTGATCGATAATATAATACTTTAA

mRNA sequence

TCATTCCAACAACAAAACCTCGTTAGGGTTTACAGAGAGAGAAAGAAAAAGCGAAAACAGAGATTTAACAACTGACAATTAACGCTTCATCTATATATACATACATTCACACATATATATATAGATTCCTCTGTTCAACAGTGCCGTTTTTGACCCGTTTCGGCCACCTACGCCACCCTCGATGCCCTCTCCATTTTCGGCTGCGACAATTCTCCACCCTTCTGTTTCTTCGTTTTAGTTCGTGTTTCTTCTCTCTCTCAAGATTTGAGGAATTGGGTAGGTTTGTTTTAAGGGATTTTTGTTGAACTATGGCGGCCATGGCTCAGCTGCATTGCTCCATTCGCCCTAGGCATTACTATAATGTTCCCAGTAGCCATGCTTTTAACGACACTCCGGCTTTCTCTTTTCTATCTGATTCGTCGGCGGTTGAATCGAGGAGCCGATCTCTTTCTCTTTTTAATGCGGATTTAACGAGGCCTAGTTTTTTGGCGAAATCTGAACTTTCTCTTGCTGGTGGCGACGGTGGGAATGGCGTTGGCCGCGGCGGAGGAGGCGGCGGTGGTGGTGATAGTGGTGGTTGGAGCGATGATCGGGCTCATGGGGATGATGATTCTTCAAGTTTTGGAGTGTTTGGATTGTTTCTCAAAGGGTGGAGATCCAGAGTTGCTGCGGATCCACAGTTTCCTTTCAAGGTTCTGATGGAGGAACTGGTTGGTGTGAGTGCTTGTGTTCTTGGAGACATGGCGTCCCGCCCCAATTTCGGTCTTAACGAGCTCGACTTCGTCTTCTCCACCCTCGTTGTCGGATCTATACTGAATTTCACTCTCATGTATCTTTTGGCTCCCACTGCATCAGCTGGTGCAGCAGCCAAGCAGCTTCCTGCGATCTTTGCGAGTTGCCCCACCAGCCATATGTTCGAACCTGGTGCATTCACGGTCTTGGATCGATTGGGAACCTTTGTTTACAAAGGAACCGTCTTCGCTGCAGTCGGACTAGCAGCCGGGCTCGTCGGGACTGCACTCTCAAATGGCTTGATCAAACTGAGGAAGAAGATGGATCCCGAATTCGAGACGCCGAACAAGCCACCTCCCACATTGTTGAACGCCATGACTTGGGCAATTCACATGGGGGTCAGCAGTAACTTGAGATACCAAACTTTGAACGGAATTGAATTCGTGTTGGCCAATGGGCTTTCCCCTCTGGCATTCAAGAGCTCTGTGGTGGTGTTGAGATGTTTGAACAATGTTCTCGGAGGCATGTCGTTCGTCATCCTTGCACGAATGACAGGTTCACAGAGCATCGAGGAGCCGAAGCCAGCAGCAGTAGAGTTGGATTCTGCTGATGAGAAAGAGAAGCTGTTGGAGGGAGACAAAGATGAGGAGTTAAGGAGCAACCAGACAGCTTACAAGTGAGAATCTATGAATAATTGAGATTCAAAGTAAGGCCATTCTGCAAGAACTTGGTATCATTTTGGCTGTGTCTCCATTGTTAATATATGCTCCATGCTCTGTGACTAAGGATCATTTTACTTTGTTTGTAACAATAAAGAAGCTCAAGTGGTGTGGGGATTCTGAAATGTTAGGTGTTATTATGAGGCTTTGCTAATAGTTTTCTTGGAAACTCAATGAGTTGCTTTATGGGCCAAAAATGTGTTTGTCAAAAAAGTCTCTCTGGATGTGAATTTTGAGAGCTGACTCTAAAATTTTGTTACCAAGTTTTAGCTGACTAAAGCAACAAATCCCTTTTTTCCTGTAAAGTGAACATGTTGGTTGGAATTCGAACCTGTTAACCTTTGATCGATAATATAATACTTTAA

Coding sequence (CDS)

ATGGCGGCCATGGCTCAGCTGCATTGCTCCATTCGCCCTAGGCATTACTATAATGTTCCCAGTAGCCATGCTTTTAACGACACTCCGGCTTTCTCTTTTCTATCTGATTCGTCGGCGGTTGAATCGAGGAGCCGATCTCTTTCTCTTTTTAATGCGGATTTAACGAGGCCTAGTTTTTTGGCGAAATCTGAACTTTCTCTTGCTGGTGGCGACGGTGGGAATGGCGTTGGCCGCGGCGGAGGAGGCGGCGGTGGTGGTGATAGTGGTGGTTGGAGCGATGATCGGGCTCATGGGGATGATGATTCTTCAAGTTTTGGAGTGTTTGGATTGTTTCTCAAAGGGTGGAGATCCAGAGTTGCTGCGGATCCACAGTTTCCTTTCAAGGTTCTGATGGAGGAACTGGTTGGTGTGAGTGCTTGTGTTCTTGGAGACATGGCGTCCCGCCCCAATTTCGGTCTTAACGAGCTCGACTTCGTCTTCTCCACCCTCGTTGTCGGATCTATACTGAATTTCACTCTCATGTATCTTTTGGCTCCCACTGCATCAGCTGGTGCAGCAGCCAAGCAGCTTCCTGCGATCTTTGCGAGTTGCCCCACCAGCCATATGTTCGAACCTGGTGCATTCACGGTCTTGGATCGATTGGGAACCTTTGTTTACAAAGGAACCGTCTTCGCTGCAGTCGGACTAGCAGCCGGGCTCGTCGGGACTGCACTCTCAAATGGCTTGATCAAACTGAGGAAGAAGATGGATCCCGAATTCGAGACGCCGAACAAGCCACCTCCCACATTGTTGAACGCCATGACTTGGGCAATTCACATGGGGGTCAGCAGTAACTTGAGATACCAAACTTTGAACGGAATTGAATTCGTGTTGGCCAATGGGCTTTCCCCTCTGGCATTCAAGAGCTCTGTGGTGGTGTTGAGATGTTTGAACAATGTTCTCGGAGGCATGTCGTTCGTCATCCTTGCACGAATGACAGGTTCACAGAGCATCGAGGAGCCGAAGCCAGCAGCAGTAGAGTTGGATTCTGCTGATGAGAAAGAGAAGCTGTTGGAGGGAGACAAAGATGAGGAGTTAAGGAGCAACCAGACAGCTTACAAGTGA

Protein sequence

MAAMAQLHCSIRPRHYYNVPSSHAFNDTPAFSFLSDSSAVESRSRSLSLFNADLTRPSFLAKSELSLAGGDGGNGVGRGGGGGGGGDSGGWSDDRAHGDDDSSSFGVFGLFLKGWRSRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALSNGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSPLAFKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVELDSADEKEKLLEGDKDEELRSNQTAYK
Homology
BLAST of Lcy04g008070 vs. ExPASy Swiss-Prot
Match: Q9C9Z2 (Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER3 PE=1 SV=1)

HSP 1 Score: 380.2 bits (975), Expect = 2.7e-104
Identity = 196/267 (73.41%), Postives = 225/267 (84.27%), Query Frame = 0

Query: 68  AGGDGGNGVG-RGGGGGGGGDSGGWSDDRAHGDDDSSSFGVFGLFLKGWRSRVAADPQFP 127
           AGG GG   G  GGG G GG  GG+        ++SS +G  GLF++GWRSRVAADPQFP
Sbjct: 60  AGGGGGGSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVAADPQFP 119

Query: 128 FKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGAA 187
           FKVLMEE+VG+SACVLGDMASRPNFGLNELDFVFSTLVVGSILNF LMY+LAPTA+   +
Sbjct: 120 FKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGS 179

Query: 188 AKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALSNGLIKLR 247
           ++ LP IF +CP+SHMFE G+FTV++R GT VYKG VFA+VGLAAGLVGTA+SNGLI LR
Sbjct: 180 SQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLR 239

Query: 248 KKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSPLAFKSSVVV 307
           KKMDP FETPNKPPPT+LN++TWA HMGVS+N RYQTLNGIEF+LA  L PL FK+SV+V
Sbjct: 240 KKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIV 299

Query: 308 LRCLNNVLGGMSFVILARMTGSQSIEE 334
           LRC NNV GGMSFV+LARMTGSQS+EE
Sbjct: 300 LRCANNVAGGMSFVLLARMTGSQSVEE 326

BLAST of Lcy04g008070 vs. ExPASy Swiss-Prot
Match: Q9C9Z3 (Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER2 PE=2 SV=1)

HSP 1 Score: 370.2 bits (949), Expect = 2.8e-101
Identity = 203/308 (65.91%), Postives = 240/308 (77.92%), Query Frame = 0

Query: 43  RSRSLSLFNADLTRPSFLAKSELSLAGGDGGNGVG-RGGGGGGGGDSGGWSDDRAHGDDD 102
           R+ S+S  + + + P+ +    +  AGG GG  +G  GGG G GG  GG+       +++
Sbjct: 39  RNGSVSSLHTNFSSPNIM----VPCAGGGGGGSIGNHGGGSGSGGGGGGYGGSE---EEE 98

Query: 103 SSSFGVFGLFLKGWRSRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFS 162
           SS +G  GLF++GWRSRVAAD QFPFKVLME LVGVSA VLGDMASRPNFGLNELDFVFS
Sbjct: 99  SSPWGPLGLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFS 158

Query: 163 TLVVGSILNFTLMYLLAPTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKG 222
           TLVVGSILNFTLMYLLAP+A +  ++  LP IF SCP+SHMFE G FT+++R GT VYKG
Sbjct: 159 TLVVGSILNFTLMYLLAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKG 218

Query: 223 TVFAAVGLAAGLVGTALSNGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRY 282
            VFA VGLAAGLVGTA+SNGLI LRKK+DP FETPNKPPPTLLN++TWA HMGVS+N+RY
Sbjct: 219 MVFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRY 278

Query: 283 QTLNGIEFVLANGLSPLAFKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVEL 342
           QTLNG EF+L   L PL FK+SV+ LR +NNVLGGMSFV LARMTGSQS+EE K   +E+
Sbjct: 279 QTLNGAEFLLEKSLPPLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEK--KIEM 337

Query: 343 DSADEKEK 350
               EKEK
Sbjct: 339 SEISEKEK 337

BLAST of Lcy04g008070 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.3e-21
Identity = 101/323 (31.27%), Postives = 147/323 (45.51%), Query Frame = 0

Query: 69  GGDGGNGVGRGGGGGGGGDSGGWSDDRAHGD---------------------------DD 128
           GG+GGNG G GGGG G GD G    D+A                              + 
Sbjct: 113 GGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPEDMLEA 172

Query: 129 SSSFGVFGLFLKGW--------------------RSRVAADPQFPFKVLMEELVGVSACV 188
           + S G+  LFL  +                    R+R+ ADP F FKV  E  +      
Sbjct: 173 AKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDSCCAT 232

Query: 189 LGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGAAA-------KQLPAIF 248
             ++  R     +E +   + L+VG +++  L+ LLAP A  G  +       K L    
Sbjct: 233 FAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRAC 292

Query: 249 ASCPTSHMFE---PGA-FTVLDRLGTFVYKGTVFAAVGLAAGLVGTALSNGLIKLRKKMD 308
           AS P+S +FE   PG  F+V  R+ TF YKG ++ +VG   GL+G  ++N LI   K+  
Sbjct: 293 ASLPSS-VFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIAN-LIMTAKRSV 352

Query: 309 PEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLS----PLAFKSSVVV 330
            + E     PP   +A  W + +G+SSN RYQ +NG+E V+    +    P+   +  V 
Sbjct: 353 KKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFTVG 412

BLAST of Lcy04g008070 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.8e-20
Identity = 99/325 (30.46%), Postives = 154/325 (47.38%), Query Frame = 0

Query: 69  GGDGGNGVGRGGGGGGGGDSGGWSDD-------------------RAHGD---------- 128
           G +G +G G GGGGG GG+  G  +D                    A G           
Sbjct: 114 GFNGSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAA 173

Query: 129 --------------DDSSSFGVFGLFLKGW---RSRVAADPQFPFKVLMEELVGVSACVL 188
                         D  SS G+ G  ++ W   R+R+ ADP F FK+  E ++      +
Sbjct: 174 KNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATV 233

Query: 189 GDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA-------PTASAGAAAKQLPAIFA 248
            ++  R      E +   + L+VG+++N  L+ +LA       P+AS G   + + A + 
Sbjct: 234 AEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFA-YN 293

Query: 249 SCPTSHMFE---PGA-FTVLDRLGTFVYKGTVFAAVGLAAGLVGTALSNGLIKLRKKMDP 308
           + P+S +FE   PG  F+   RL T+ YKG ++ AVG   G+VG  ++N ++  ++ ++ 
Sbjct: 294 ALPSS-VFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINK 353

Query: 309 EFETPNKP-PPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSPLAFK------SSV 330
             E  N P PP + +A  W + + VSSN RYQ +NG+E V+    SP A K      +  
Sbjct: 354 SEE--NIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVE--ASPFAKKFPPAAMAFT 413

BLAST of Lcy04g008070 vs. ExPASy Swiss-Prot
Match: Q94CJ5 (Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.9e-18
Identity = 97/326 (29.75%), Postives = 139/326 (42.64%), Query Frame = 0

Query: 65  LSLAGGDGGNGVGRGG-GGGGGGDSGGWSDDRAHGDDDSS-------------------- 124
           LS + G+GG+    GG  GGGGG  GG +D   HGD+D                      
Sbjct: 60  LSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDRNRNEAMLLLKESGIELESL 119

Query: 125 -------------SFGVFGLFLK--------------GWRSRVAADPQFPFKVLMEELVG 184
                           V   FL+              G+R R+ AD  F  K+ ME  VG
Sbjct: 120 PKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVG 179

Query: 185 VSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAS----AGAAAKQLPA 244
           +      +   R     NEL+ VF+ + +  I +F L+YL APT S        A  +  
Sbjct: 180 IFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISK 239

Query: 245 IFASCPTSHM---FEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALSNGLIKLRKKM 304
            F +CP +         ++T+L RLG     G    AVG  + LVGTA++N  IK RK +
Sbjct: 240 FFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAV 299

Query: 305 DPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSP------LAFKSS 330
           D   E   +  P +  ++ + ++M VSSNLRYQ + G+  +    L P      LA  + 
Sbjct: 300 DQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGV--IEQRLLEPMLHQHKLALSAL 359

BLAST of Lcy04g008070 vs. ExPASy TrEMBL
Match: A0A6J1DQ40 (protein RETICULATA-RELATED 3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023180 PE=3 SV=1)

HSP 1 Score: 637.9 bits (1644), Expect = 2.6e-179
Identity = 333/361 (92.24%), Postives = 350/361 (96.95%), Query Frame = 0

Query: 1   MAAMAQLHCSIRPRHYYNVPSSHAFNDTPAFSFLSDSSAVESRSRSLSLFNADLTRPSFL 60
           MAAMAQLHCS+RPR+YYNVP +HA+N+TPAFSFLSDSS ++SR+RSLSLF+ DLTRPSFL
Sbjct: 1   MAAMAQLHCSLRPRNYYNVPCNHAYNNTPAFSFLSDSSVIQSRTRSLSLFHTDLTRPSFL 60

Query: 61  AKSELSLA-GGDGGNGVGRGGGGGGGGDSGGWSDDRAHGDDDSSSFGVFGLFLKGWRSRV 120
           AKSELSLA GGDGG+GVGRGGGGGGGGDSGGWSDDRAHGDDDSSSFGV GLFLKGWRSRV
Sbjct: 61  AKSELSLAGGGDGGDGVGRGGGGGGGGDSGGWSDDRAHGDDDSSSFGVLGLFLKGWRSRV 120

Query: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180
           AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP
Sbjct: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180

Query: 181 TASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALS 240
           TA+AG AAKQLPAIF+SCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALS
Sbjct: 181 TAAAGVAAKQLPAIFSSCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALS 240

Query: 241 NGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSPLA 300
           NGLIKLRKKMDPEFETPNK PPTLLNA+TWAIHMGVSSNLRYQTLNG+EFVLA GL PLA
Sbjct: 241 NGLIKLRKKMDPEFETPNKAPPTLLNALTWAIHMGVSSNLRYQTLNGVEFVLAKGLPPLA 300

Query: 301 FKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVELDSADEKEKLLEGDKDEEL 360
           FKSSVVVLRCLNNVLGG+SFVILAR TGSQSIE+PK AAVELDSADEKEKLLEGDKDEEL
Sbjct: 301 FKSSVVVLRCLNNVLGGVSFVILARATGSQSIEQPKAAAVELDSADEKEKLLEGDKDEEL 360

BLAST of Lcy04g008070 vs. ExPASy TrEMBL
Match: A0A0A0L080 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337260 PE=3 SV=1)

HSP 1 Score: 624.8 bits (1610), Expect = 2.3e-175
Identity = 330/370 (89.19%), Postives = 348/370 (94.05%), Query Frame = 0

Query: 1   MAAMAQLHCSIRPRHYYNVPSSHAFNDTPAFSFLSDSSAVESRSR--SLSLFNADLTRPS 60
           MAAMAQLHCS+RPR YY+VP++H FN+TPAFSFLS+SSAVESRSR  SLSLFNADLTRPS
Sbjct: 1   MAAMAQLHCSVRPRQYYSVPNNHGFNNTPAFSFLSNSSAVESRSRSLSLSLFNADLTRPS 60

Query: 61  FLAKSELSLAGGDGGNGVGRGGGGGGGGDSGGWSDDRAHG-DDDSSSFGVFGLFLKGWRS 120
           FLAKSELSLAGGDGGNGVG GG GGGGG  GGWSDDR HG DDDSSSFGV GLFLKGWRS
Sbjct: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTA 240
           APTA+AG AA++LP+IFASCPTSHMFEPGAFT+LDR+GTFVYKGTVFAAVGLAAGLVGTA
Sbjct: 181 APTAAAGVAAQRLPSIFASCPTSHMFEPGAFTLLDRVGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSP 300
           LSNGLI LRKKMDP FETPNK PPTLLNAMTWAIHMGVSSNLRYQTLNG+E+VLA GL P
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVELDSADEKEKLLEGDKDE 360
           LAFKSSVVVLRCLNNVLGGMSFV+LARMTGSQS+E PK A VELDS DEKEKLLEGDK+E
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARMTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQTAYK 368
           ELRSNQTA K
Sbjct: 361 ELRSNQTACK 370

BLAST of Lcy04g008070 vs. ExPASy TrEMBL
Match: A0A1S3CIX7 (protein RETICULATA-RELATED 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501484 PE=3 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 5.1e-175
Identity = 330/370 (89.19%), Postives = 346/370 (93.51%), Query Frame = 0

Query: 1   MAAMAQLHCSIRPRHYYNVPSSHAFNDTPAFSFLSDSSAVESRSR--SLSLFNADLTRPS 60
           MAAMAQLHCS+RPR YYNVP++H FN+TPAFSFLS+SS VESRSR  SLSLFNADLTR S
Sbjct: 1   MAAMAQLHCSVRPRQYYNVPNNHGFNNTPAFSFLSNSSVVESRSRSLSLSLFNADLTRRS 60

Query: 61  FLAKSELSLAGGDGGNGVGRGGGGGGGGDSGGWSDDRAHG-DDDSSSFGVFGLFLKGWRS 120
           +LAKSELSLAGGDGGNGVG GG GGGGG  GGWSDDR HG DDDSSSFGV GLFLKGWRS
Sbjct: 61  YLAKSELSLAGGDGGNGVGHGGKGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTA 240
           APTA+AGA AKQLP+IFASCPTSHMFEPGAFT+LDRLGTFVYKGTVFAAVGLAAGLVGTA
Sbjct: 181 APTAAAGAVAKQLPSIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSP 300
           LSNGLI LRKKMDP FETPNK PPTLLNAMTWAIHMGVSSNLRYQTLNG+E+VLA GL P
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVELDSADEKEKLLEGDKDE 360
           LAFKSSVVVLRCLNNVLGGMSFV+LAR+TGSQS+E PK A VELDS DEKEKLLEGDK+E
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQTAYK 368
           ELRSNQTA K
Sbjct: 361 ELRSNQTACK 370

BLAST of Lcy04g008070 vs. ExPASy TrEMBL
Match: A0A5D3C7A3 (Protein RETICULATA-RELATED 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00830 PE=3 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 5.1e-175
Identity = 330/370 (89.19%), Postives = 346/370 (93.51%), Query Frame = 0

Query: 1   MAAMAQLHCSIRPRHYYNVPSSHAFNDTPAFSFLSDSSAVESRSR--SLSLFNADLTRPS 60
           MAAMAQLHCS+RPR YYNVP++H FN+TPAFSFLS+SS VESRSR  SLSLFNADLTR S
Sbjct: 1   MAAMAQLHCSVRPRQYYNVPNNHGFNNTPAFSFLSNSSVVESRSRSLSLSLFNADLTRRS 60

Query: 61  FLAKSELSLAGGDGGNGVGRGGGGGGGGDSGGWSDDRAHG-DDDSSSFGVFGLFLKGWRS 120
           +LAKSELSLAGGDGGNGVG GG GGGGG  GGWSDDR HG DDDSSSFGV GLFLKGWRS
Sbjct: 61  YLAKSELSLAGGDGGNGVGHGGKGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTA 240
           APTA+AGA AKQLP+IFASCPTSHMFEPGAFT+LDRLGTFVYKGTVFAAVGLAAGLVGTA
Sbjct: 181 APTAAAGAVAKQLPSIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSP 300
           LSNGLI LRKKMDP FETPNK PPTLLNAMTWAIHMGVSSNLRYQTLNG+E+VLA GL P
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVELDSADEKEKLLEGDKDE 360
           LAFKSSVVVLRCLNNVLGGMSFV+LAR+TGSQS+E PK A VELDS DEKEKLLEGDK+E
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQTAYK 368
           ELRSNQTA K
Sbjct: 361 ELRSNQTACK 370

BLAST of Lcy04g008070 vs. ExPASy TrEMBL
Match: A0A6J1HTL4 (protein RETICULATA-RELATED 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466041 PE=3 SV=1)

HSP 1 Score: 617.8 bits (1592), Expect = 2.8e-173
Identity = 325/361 (90.03%), Postives = 344/361 (95.29%), Query Frame = 0

Query: 1   MAAMAQLHCSIRPRHYYNVPSSHAFNDTPAFSFLSDSSAVESRSRSLSLFNADLTRPSFL 60
           MA+MAQLHCS+RPR+YYNVPSSHA+N+ PAFSFLS+SSAVESRSRSLSLFNADLTR  FL
Sbjct: 1   MASMAQLHCSVRPRNYYNVPSSHAYNNPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFL 60

Query: 61  AKSELSLAGGDGGNGVGR-GGGGGGGGDSGGWSDDRAHGDDDSSSFGVFGLFLKGWRSRV 120
            KSELSLAGGDGGNGVGR GGGGGGGGD+GGWSDDRA G DDSSSFGVFGLFL+GWR+RV
Sbjct: 61  VKSELSLAGGDGGNGVGRGGGGGGGGGDNGGWSDDRADG-DDSSSFGVFGLFLQGWRTRV 120

Query: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180
           AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP
Sbjct: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180

Query: 181 TASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALS 240
           TASAG AAKQLPAIF SCPTSHMFEPGAFTVL+RLGT VYKGTVFA VGLAAGLVGTALS
Sbjct: 181 TASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALS 240

Query: 241 NGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSPLA 300
           NGLIKLRKKMDPEFETPNK PPTLLNAMTWAIHMGVSSNLRYQ+LNG+EFVLA GL PLA
Sbjct: 241 NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLA 300

Query: 301 FKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVELDSADEKEKLLEGDKDEEL 360
           FKSSVVVLRCLNN+LGGMSFVILARMTGSQS+E+ KPAA++LD+ D KEKLLEGDKDEEL
Sbjct: 301 FKSSVVVLRCLNNILGGMSFVILARMTGSQSVEDAKPAALDLDATDTKEKLLEGDKDEEL 360

BLAST of Lcy04g008070 vs. NCBI nr
Match: XP_022156248.1 (protein RETICULATA-RELATED 3, chloroplastic [Momordica charantia])

HSP 1 Score: 637.9 bits (1644), Expect = 5.4e-179
Identity = 333/361 (92.24%), Postives = 350/361 (96.95%), Query Frame = 0

Query: 1   MAAMAQLHCSIRPRHYYNVPSSHAFNDTPAFSFLSDSSAVESRSRSLSLFNADLTRPSFL 60
           MAAMAQLHCS+RPR+YYNVP +HA+N+TPAFSFLSDSS ++SR+RSLSLF+ DLTRPSFL
Sbjct: 1   MAAMAQLHCSLRPRNYYNVPCNHAYNNTPAFSFLSDSSVIQSRTRSLSLFHTDLTRPSFL 60

Query: 61  AKSELSLA-GGDGGNGVGRGGGGGGGGDSGGWSDDRAHGDDDSSSFGVFGLFLKGWRSRV 120
           AKSELSLA GGDGG+GVGRGGGGGGGGDSGGWSDDRAHGDDDSSSFGV GLFLKGWRSRV
Sbjct: 61  AKSELSLAGGGDGGDGVGRGGGGGGGGDSGGWSDDRAHGDDDSSSFGVLGLFLKGWRSRV 120

Query: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180
           AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP
Sbjct: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180

Query: 181 TASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALS 240
           TA+AG AAKQLPAIF+SCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALS
Sbjct: 181 TAAAGVAAKQLPAIFSSCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALS 240

Query: 241 NGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSPLA 300
           NGLIKLRKKMDPEFETPNK PPTLLNA+TWAIHMGVSSNLRYQTLNG+EFVLA GL PLA
Sbjct: 241 NGLIKLRKKMDPEFETPNKAPPTLLNALTWAIHMGVSSNLRYQTLNGVEFVLAKGLPPLA 300

Query: 301 FKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVELDSADEKEKLLEGDKDEEL 360
           FKSSVVVLRCLNNVLGG+SFVILAR TGSQSIE+PK AAVELDSADEKEKLLEGDKDEEL
Sbjct: 301 FKSSVVVLRCLNNVLGGVSFVILARATGSQSIEQPKAAAVELDSADEKEKLLEGDKDEEL 360

BLAST of Lcy04g008070 vs. NCBI nr
Match: XP_038883563.1 (protein RETICULATA-RELATED 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 634.4 bits (1635), Expect = 6.0e-178
Identity = 332/368 (90.22%), Postives = 348/368 (94.57%), Query Frame = 0

Query: 1   MAAMAQLHCSIRPRHYYNVPSSHAFNDTPAFSFLSDSSAVESRSRSLSLFNADLTRPSFL 60
           MAAMAQLHCS+RPRH+YNVP++ A+N TPAFSFLS+SS VESRSRSLS FNADLTRPSFL
Sbjct: 1   MAAMAQLHCSVRPRHHYNVPNNPAYNSTPAFSFLSNSSVVESRSRSLSFFNADLTRPSFL 60

Query: 61  AKSELSLAGGDGGNGVGRGGGGGGGGDSGGWSDDRAHGDD-DSSSFGVFGLFLKGWRSRV 120
           AKSELSLAGGDGGNGVG GG GGGGG  GGWSDDR HGDD DSSSFGV GLFLKGWRSRV
Sbjct: 61  AKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDNDSSSFGVLGLFLKGWRSRV 120

Query: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180
           AADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP
Sbjct: 121 AADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180

Query: 181 TASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALS 240
           TA+AGAAAKQLPAIFASCPTSHMFEPGAFT+LDRLGTFVYKGTVFAAVGLAAGLVGTALS
Sbjct: 181 TAAAGAAAKQLPAIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTALS 240

Query: 241 NGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSPLA 300
           NGLIKLRKKMDP FETPNK PPTLLNAMTWAIHMGVSSNLRYQTLNG+EF+LA GL PLA
Sbjct: 241 NGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEFLLAKGLPPLA 300

Query: 301 FKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVELDSADEKEKLLEGDKDEEL 360
           FKSSVVVLRCLNNVLGGMSFV+LAR+TGSQS+E PKPA +ELDS DEKEKLLEGDK+EEL
Sbjct: 301 FKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAVMELDSGDEKEKLLEGDKEEEL 360

Query: 361 RSNQTAYK 368
           R NQTA K
Sbjct: 361 RGNQTACK 368

BLAST of Lcy04g008070 vs. NCBI nr
Match: XP_004142670.1 (protein RETICULATA-RELATED 3, chloroplastic [Cucumis sativus] >KGN54469.1 hypothetical protein Csa_012048 [Cucumis sativus])

HSP 1 Score: 624.8 bits (1610), Expect = 4.8e-175
Identity = 330/370 (89.19%), Postives = 348/370 (94.05%), Query Frame = 0

Query: 1   MAAMAQLHCSIRPRHYYNVPSSHAFNDTPAFSFLSDSSAVESRSR--SLSLFNADLTRPS 60
           MAAMAQLHCS+RPR YY+VP++H FN+TPAFSFLS+SSAVESRSR  SLSLFNADLTRPS
Sbjct: 1   MAAMAQLHCSVRPRQYYSVPNNHGFNNTPAFSFLSNSSAVESRSRSLSLSLFNADLTRPS 60

Query: 61  FLAKSELSLAGGDGGNGVGRGGGGGGGGDSGGWSDDRAHG-DDDSSSFGVFGLFLKGWRS 120
           FLAKSELSLAGGDGGNGVG GG GGGGG  GGWSDDR HG DDDSSSFGV GLFLKGWRS
Sbjct: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTA 240
           APTA+AG AA++LP+IFASCPTSHMFEPGAFT+LDR+GTFVYKGTVFAAVGLAAGLVGTA
Sbjct: 181 APTAAAGVAAQRLPSIFASCPTSHMFEPGAFTLLDRVGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSP 300
           LSNGLI LRKKMDP FETPNK PPTLLNAMTWAIHMGVSSNLRYQTLNG+E+VLA GL P
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVELDSADEKEKLLEGDKDE 360
           LAFKSSVVVLRCLNNVLGGMSFV+LARMTGSQS+E PK A VELDS DEKEKLLEGDK+E
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARMTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQTAYK 368
           ELRSNQTA K
Sbjct: 361 ELRSNQTACK 370

BLAST of Lcy04g008070 vs. NCBI nr
Match: XP_008463291.1 (PREDICTED: protein RETICULATA-RELATED 3, chloroplastic [Cucumis melo] >XP_016903009.1 PREDICTED: protein RETICULATA-RELATED 3, chloroplastic [Cucumis melo] >TYK06219.1 protein RETICULATA-RELATED 3 [Cucumis melo var. makuwa])

HSP 1 Score: 623.6 bits (1607), Expect = 1.1e-174
Identity = 330/370 (89.19%), Postives = 346/370 (93.51%), Query Frame = 0

Query: 1   MAAMAQLHCSIRPRHYYNVPSSHAFNDTPAFSFLSDSSAVESRSR--SLSLFNADLTRPS 60
           MAAMAQLHCS+RPR YYNVP++H FN+TPAFSFLS+SS VESRSR  SLSLFNADLTR S
Sbjct: 1   MAAMAQLHCSVRPRQYYNVPNNHGFNNTPAFSFLSNSSVVESRSRSLSLSLFNADLTRRS 60

Query: 61  FLAKSELSLAGGDGGNGVGRGGGGGGGGDSGGWSDDRAHG-DDDSSSFGVFGLFLKGWRS 120
           +LAKSELSLAGGDGGNGVG GG GGGGG  GGWSDDR HG DDDSSSFGV GLFLKGWRS
Sbjct: 61  YLAKSELSLAGGDGGNGVGHGGKGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTA 240
           APTA+AGA AKQLP+IFASCPTSHMFEPGAFT+LDRLGTFVYKGTVFAAVGLAAGLVGTA
Sbjct: 181 APTAAAGAVAKQLPSIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSP 300
           LSNGLI LRKKMDP FETPNK PPTLLNAMTWAIHMGVSSNLRYQTLNG+E+VLA GL P
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVELDSADEKEKLLEGDKDE 360
           LAFKSSVVVLRCLNNVLGGMSFV+LAR+TGSQS+E PK A VELDS DEKEKLLEGDK+E
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQTAYK 368
           ELRSNQTA K
Sbjct: 361 ELRSNQTACK 370

BLAST of Lcy04g008070 vs. NCBI nr
Match: XP_023517477.1 (protein RETICULATA-RELATED 3, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023517478.1 protein RETICULATA-RELATED 3, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 620.9 bits (1600), Expect = 6.9e-174
Identity = 328/361 (90.86%), Postives = 343/361 (95.01%), Query Frame = 0

Query: 1   MAAMAQLHCSIRPRHYYNVPSSHAFNDTPAFSFLSDSSAVESRSRSLSLFNADLTRPSFL 60
           MA+MAQLHCS+RPR YYNVP SHA+ND PAFSFLS+SSAVESRSRSLSLFNADLTR  FL
Sbjct: 1   MASMAQLHCSVRPRDYYNVPRSHAYNDPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFL 60

Query: 61  AKSELSLAGGDGGNGVGR-GGGGGGGGDSGGWSDDRAHGDDDSSSFGVFGLFLKGWRSRV 120
            KSELSLAGGDGGNGVGR GGGGGGGGDSGGWSDDRA G DDSSSFGVFGLFL+GWR+RV
Sbjct: 61  VKSELSLAGGDGGNGVGRGGGGGGGGGDSGGWSDDRADG-DDSSSFGVFGLFLQGWRTRV 120

Query: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180
           AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP
Sbjct: 121 AADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180

Query: 181 TASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALS 240
           TASAG AAKQLPAIF SCPTSHMFEPGAFTVL+RLGT VYKGTVFA VGLAAGLVGTALS
Sbjct: 181 TASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTALS 240

Query: 241 NGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSPLA 300
           NGLIKLRKKMDPEFETPNK PPTLLNAMTWAIHMGVSSNLRYQ+LNG+EFVLA GL PLA
Sbjct: 241 NGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPLA 300

Query: 301 FKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVELDSADEKEKLLEGDKDEEL 360
           FKSSVVVLRCLNN+LGGMSFVILARMTGSQS+EE KPAA++LD+AD KEKLLEGDKDEEL
Sbjct: 301 FKSSVVVLRCLNNILGGMSFVILARMTGSQSVEEAKPAALDLDAADTKEKLLEGDKDEEL 360

BLAST of Lcy04g008070 vs. TAIR 10
Match: AT3G08640.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 380.2 bits (975), Expect = 1.9e-105
Identity = 196/267 (73.41%), Postives = 225/267 (84.27%), Query Frame = 0

Query: 68  AGGDGGNGVG-RGGGGGGGGDSGGWSDDRAHGDDDSSSFGVFGLFLKGWRSRVAADPQFP 127
           AGG GG   G  GGG G GG  GG+        ++SS +G  GLF++GWRSRVAADPQFP
Sbjct: 60  AGGGGGGSTGNNGGGSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVAADPQFP 119

Query: 128 FKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGAA 187
           FKVLMEE+VG+SACVLGDMASRPNFGLNELDFVFSTLVVGSILNF LMY+LAPTA+   +
Sbjct: 120 FKVLMEEIVGLSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGS 179

Query: 188 AKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALSNGLIKLR 247
           ++ LP IF +CP+SHMFE G+FTV++R GT VYKG VFA+VGLAAGLVGTA+SNGLI LR
Sbjct: 180 SQTLPGIFRNCPSSHMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLR 239

Query: 248 KKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSPLAFKSSVVV 307
           KKMDP FETPNKPPPT+LN++TWA HMGVS+N RYQTLNGIEF+LA  L PL FK+SV+V
Sbjct: 240 KKMDPSFETPNKPPPTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIV 299

Query: 308 LRCLNNVLGGMSFVILARMTGSQSIEE 334
           LRC NNV GGMSFV+LARMTGSQS+EE
Sbjct: 300 LRCANNVAGGMSFVLLARMTGSQSVEE 326

BLAST of Lcy04g008070 vs. TAIR 10
Match: AT3G08630.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 370.2 bits (949), Expect = 2.0e-102
Identity = 203/308 (65.91%), Postives = 240/308 (77.92%), Query Frame = 0

Query: 43  RSRSLSLFNADLTRPSFLAKSELSLAGGDGGNGVG-RGGGGGGGGDSGGWSDDRAHGDDD 102
           R+ S+S  + + + P+ +    +  AGG GG  +G  GGG G GG  GG+       +++
Sbjct: 39  RNGSVSSLHTNFSSPNIM----VPCAGGGGGGSIGNHGGGSGSGGGGGGYGGSE---EEE 98

Query: 103 SSSFGVFGLFLKGWRSRVAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFS 162
           SS +G  GLF++GWRSRVAAD QFPFKVLME LVGVSA VLGDMASRPNFGLNELDFVFS
Sbjct: 99  SSPWGPLGLFIQGWRSRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFS 158

Query: 163 TLVVGSILNFTLMYLLAPTASAGAAAKQLPAIFASCPTSHMFEPGAFTVLDRLGTFVYKG 222
           TLVVGSILNFTLMYLLAP+A +  ++  LP IF SCP+SHMFE G FT+++R GT VYKG
Sbjct: 159 TLVVGSILNFTLMYLLAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKG 218

Query: 223 TVFAAVGLAAGLVGTALSNGLIKLRKKMDPEFETPNKPPPTLLNAMTWAIHMGVSSNLRY 282
            VFA VGLAAGLVGTA+SNGLI LRKK+DP FETPNKPPPTLLN++TWA HMGVS+N+RY
Sbjct: 219 MVFATVGLAAGLVGTAISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRY 278

Query: 283 QTLNGIEFVLANGLSPLAFKSSVVVLRCLNNVLGGMSFVILARMTGSQSIEEPKPAAVEL 342
           QTLNG EF+L   L PL FK+SV+ LR +NNVLGGMSFV LARMTGSQS+EE K   +E+
Sbjct: 279 QTLNGAEFLLEKSLPPLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEK--KIEM 337

Query: 343 DSADEKEK 350
               EKEK
Sbjct: 339 SEISEKEK 337

BLAST of Lcy04g008070 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 105.5 bits (262), Expect = 9.1e-23
Identity = 101/323 (31.27%), Postives = 147/323 (45.51%), Query Frame = 0

Query: 69  GGDGGNGVGRGGGGGGGGDSGGWSDDRAHGD---------------------------DD 128
           GG+GGNG G GGGG G GD G    D+A                              + 
Sbjct: 113 GGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPEDMLEA 172

Query: 129 SSSFGVFGLFLKGW--------------------RSRVAADPQFPFKVLMEELVGVSACV 188
           + S G+  LFL  +                    R+R+ ADP F FKV  E  +      
Sbjct: 173 AKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDSCCAT 232

Query: 189 LGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTASAGAAA-------KQLPAIF 248
             ++  R     +E +   + L+VG +++  L+ LLAP A  G  +       K L    
Sbjct: 233 FAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRAC 292

Query: 249 ASCPTSHMFE---PGA-FTVLDRLGTFVYKGTVFAAVGLAAGLVGTALSNGLIKLRKKMD 308
           AS P+S +FE   PG  F+V  R+ TF YKG ++ +VG   GL+G  ++N LI   K+  
Sbjct: 293 ASLPSS-VFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIAN-LIMTAKRSV 352

Query: 309 PEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLS----PLAFKSSVVV 330
            + E     PP   +A  W + +G+SSN RYQ +NG+E V+    +    P+   +  V 
Sbjct: 353 KKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFTVG 412

BLAST of Lcy04g008070 vs. TAIR 10
Match: AT2G37860.3 (Protein of unknown function (DUF3411) )

HSP 1 Score: 101.7 bits (252), Expect = 1.3e-21
Identity = 99/325 (30.46%), Postives = 154/325 (47.38%), Query Frame = 0

Query: 69  GGDGGNGVGRGGGGGGGGDSGGWSDD-------------------RAHGD---------- 128
           G +G +G G GGGGG GG+  G  +D                    A G           
Sbjct: 114 GFNGSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAA 173

Query: 129 --------------DDSSSFGVFGLFLKGW---RSRVAADPQFPFKVLMEELVGVSACVL 188
                         D  SS G+ G  ++ W   R+R+ ADP F FK+  E ++      +
Sbjct: 174 KNYGIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATV 233

Query: 189 GDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA-------PTASAGAAAKQLPAIFA 248
            ++  R      E +   + L+VG+++N  L+ +LA       P+AS G   + + A + 
Sbjct: 234 AEVQKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFA-YN 293

Query: 249 SCPTSHMFE---PGA-FTVLDRLGTFVYKGTVFAAVGLAAGLVGTALSNGLIKLRKKMDP 308
           + P+S +FE   PG  F+   RL T+ YKG ++ AVG   G+VG  ++N ++  ++ ++ 
Sbjct: 294 ALPSS-VFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINK 353

Query: 309 EFETPNKP-PPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSPLAFK------SSV 330
             E  N P PP + +A  W + + VSSN RYQ +NG+E V+    SP A K      +  
Sbjct: 354 SEE--NIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVE--ASPFAKKFPPAAMAFT 413

BLAST of Lcy04g008070 vs. TAIR 10
Match: AT5G12470.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 94.4 bits (233), Expect = 2.1e-19
Identity = 97/326 (29.75%), Postives = 139/326 (42.64%), Query Frame = 0

Query: 65  LSLAGGDGGNGVGRGG-GGGGGGDSGGWSDDRAHGDDDSS-------------------- 124
           LS + G+GG+    GG  GGGGG  GG +D   HGD+D                      
Sbjct: 60  LSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDRNRNEAMLLLKESGIELESL 119

Query: 125 -------------SFGVFGLFLK--------------GWRSRVAADPQFPFKVLMEELVG 184
                           V   FL+              G+R R+ AD  F  K+ ME  VG
Sbjct: 120 PKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVG 179

Query: 185 VSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAS----AGAAAKQLPA 244
           +      +   R     NEL+ VF+ + +  I +F L+YL APT S        A  +  
Sbjct: 180 IFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISK 239

Query: 245 IFASCPTSHM---FEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTALSNGLIKLRKKM 304
            F +CP +         ++T+L RLG     G    AVG  + LVGTA++N  IK RK +
Sbjct: 240 FFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAV 299

Query: 305 DPEFETPNKPPPTLLNAMTWAIHMGVSSNLRYQTLNGIEFVLANGLSP------LAFKSS 330
           D   E   +  P +  ++ + ++M VSSNLRYQ + G+  +    L P      LA  + 
Sbjct: 300 DQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGV--IEQRLLEPMLHQHKLALSAL 359

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9C9Z22.7e-10473.41Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R... [more]
Q9C9Z32.8e-10165.91Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R... [more]
Q9FGP91.3e-2131.27Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R... [more]
B9DFK51.8e-2030.46Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=... [more]
Q94CJ52.9e-1829.75Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R... [more]
Match NameE-valueIdentityDescription
A0A6J1DQ402.6e-17992.24protein RETICULATA-RELATED 3, chloroplastic OS=Momordica charantia OX=3673 GN=LO... [more]
A0A0A0L0802.3e-17589.19Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337260 PE=3 SV=1[more]
A0A1S3CIX75.1e-17589.19protein RETICULATA-RELATED 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501... [more]
A0A5D3C7A35.1e-17589.19Protein RETICULATA-RELATED 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A6J1HTL42.8e-17390.03protein RETICULATA-RELATED 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
Match NameE-valueIdentityDescription
XP_022156248.15.4e-17992.24protein RETICULATA-RELATED 3, chloroplastic [Momordica charantia][more]
XP_038883563.16.0e-17890.22protein RETICULATA-RELATED 3, chloroplastic [Benincasa hispida][more]
XP_004142670.14.8e-17589.19protein RETICULATA-RELATED 3, chloroplastic [Cucumis sativus] >KGN54469.1 hypoth... [more]
XP_008463291.11.1e-17489.19PREDICTED: protein RETICULATA-RELATED 3, chloroplastic [Cucumis melo] >XP_016903... [more]
XP_023517477.16.9e-17490.86protein RETICULATA-RELATED 3, chloroplastic-like [Cucurbita pepo subsp. pepo] >X... [more]
Match NameE-valueIdentityDescription
AT3G08640.11.9e-10573.41Protein of unknown function (DUF3411) [more]
AT3G08630.12.0e-10265.91Protein of unknown function (DUF3411) [more]
AT5G22790.19.1e-2331.27reticulata-related 1 [more]
AT2G37860.31.3e-2130.46Protein of unknown function (DUF3411) [more]
AT5G12470.12.1e-1929.75Protein of unknown function (DUF3411) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021825Protein RETICULATA-relatedPFAMPF11891RETICULATA-likecoord: 118..287
e-value: 4.2E-67
score: 225.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..367
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 71..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 338..367
NoneNo IPR availablePANTHERPTHR31620:SF17PROTEIN RETICULATA-RELATED 3, CHLOROPLASTIC-LIKEcoord: 1..346
NoneNo IPR availablePANTHERPTHR31620PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATEDcoord: 1..346

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g008070.1Lcy04g008070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0016021 integral component of membrane