Lcy04g004330 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g004330
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr04: 28788781 .. 28789880 (+)
RNA-Seq ExpressionLcy04g004330
SyntenyLcy04g004330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGTAAAGTTCAGTCTTATCTCGTATTCTACTAACCACATAGACGGATGGGTAGATGGGGGGGCGAGCCCATGGAGATTCACAGGGATATACGGGCATCCTCAACCGAAACAAAAGACTAGAACGTGGACACTGATGAAGCATCTCCGAGGGAACAGTGAGACCTCGTGGCTTGTGGGGGAGATTTTAATGCATTGTTGTTTGACAATGAGAATGAGGGTGGAAGGCCAAAGCCGGCTAGGGAGTTGCTTGGTTTCCGAGAGGCGATGGATGTGTGTGAGCTAATGGATCTTGGATTCTGTGGGCCGGTATTTACATGGTGTAATAGGAGGCTAGGGGAGGATATTGTTTGGGAGAGAATTGATAGGTGTGTGGGTAATGTGGCATGGCGAGATATGTTCTCTGGTTATGAGATGAGGCACCTGGATTTTAGTCGGTCGGATCATAGACCTTTACTCGTGACGGGTTCGGTGTGTGCTCGTTTGGTCCAAAATACAGGTCGCAGAATTCAAAGGTTTGAGGAGACGTGGCTCCTATCGTAGGGTTTCAAGGAAGCAGTGTCAGCTAACTGGGATCCTAATGATTCAGTAGGATCGCCGATGGCATTGGCCTCGGCGACGGAAAGGTGCATGTCTGGCCTTAGCAAATGGGGTAGGCCAAGGATGGGTAATTTTAGGCATCATATTCAGGAGGCGACAGATCAGGTTCAGCGGGCGATGGAACGTTTGGGTAGTGTGGGATCTCAGACTAATCTACAAAATGTGGAAGAACGGTTGGAGTCCTTGCTGGTTGAGGAGGAAATGTACAGGAAACAGAGATCCAGAGATAGTTGGTTGAAATGGGGGGACAGGAACACTCGGTGGTTTCATAATCATGCCTCGAGTAGGAGAAGGAAGAATGAGGTGAAGGGGTTGGAGGATGAGGATGGGGTTTGGCAACAGGATCCTAACAGAATCTTGGGACTTATAGAGTGGTACTTCAAGCACTTGTATATGACATCGCACCATTCGAATGAGGAGATAGATCAGGCCCTGTTACATTTGCTTCCCTCGGTTACGAACGAGATGAACAGTAAGCTTCTACGCCCGTTTCAGTAG

mRNA sequence

ATGGAGGTAAAGTTCAGTCTTATCTCGTATTCTACTAACCACATAGACGGATGGGTAGATGGGGGGGCGAGCCCATGGAGATTCACAGGGATATACGGGCATCCTCAACCGAAACAAAAGACTAGAACGTGGACACTGATGAAGCATCTCCGAGGGAACAGTGAGACCTCGTGGCTTGTGGGGGAGATTTTAATGCATTGTTGTTTGACAATGAGAATGAGGGTGGAAGGCCAAAGCCGGCTAGGGAGTTGCTTGGTTTCCGAGAGGCGATGGATGTGTGGTTTCAAGGAAGCAGTGTCAGCTAACTGGGATCCTAATGATTCAGTAGGATCGCCGATGGCATTGGCCTCGGCGACGGAAAGGTGCATGTCTGGCCTTAGCAAATGGGGTAGGCCAAGGATGGGTAATTTTAGGCATCATATTCAGGAGGCGACAGATCAGGTTCAGCGGGCGATGGAACGTTTGGGTAGTGTGGGATCTCAGACTAATCTACAAAATGTGGAAGAACGGTTGGAGTCCTTGCTGGTTGAGGAGGAAATGTACAGGAAACAGAGATCCAGAGATAGTTGGTTGAAATGGGGGGACAGGAACACTCGGTGGTTTCATAATCATGCCTCGAGTAGGAGAAGGAAGAATGAGGTGAAGGGGTTGGAGGATGAGGATGGGGTTTGGCAACAGGATCCTAACAGAATCTTGGGACTTATAGAGTGGTACTTCAAGCACTTGTATATGACATCGCACCATTCGAATGAGGAGATAGATCAGGCCCTGTTACATTTGCTTCCCTCGGTTACGAACGAGATGAACAGTAAGCTTCTACGCCCGTTTCAGTAG

Coding sequence (CDS)

ATGGAGGTAAAGTTCAGTCTTATCTCGTATTCTACTAACCACATAGACGGATGGGTAGATGGGGGGGCGAGCCCATGGAGATTCACAGGGATATACGGGCATCCTCAACCGAAACAAAAGACTAGAACGTGGACACTGATGAAGCATCTCCGAGGGAACAGTGAGACCTCGTGGCTTGTGGGGGAGATTTTAATGCATTGTTGTTTGACAATGAGAATGAGGGTGGAAGGCCAAAGCCGGCTAGGGAGTTGCTTGGTTTCCGAGAGGCGATGGATGTGTGGTTTCAAGGAAGCAGTGTCAGCTAACTGGGATCCTAATGATTCAGTAGGATCGCCGATGGCATTGGCCTCGGCGACGGAAAGGTGCATGTCTGGCCTTAGCAAATGGGGTAGGCCAAGGATGGGTAATTTTAGGCATCATATTCAGGAGGCGACAGATCAGGTTCAGCGGGCGATGGAACGTTTGGGTAGTGTGGGATCTCAGACTAATCTACAAAATGTGGAAGAACGGTTGGAGTCCTTGCTGGTTGAGGAGGAAATGTACAGGAAACAGAGATCCAGAGATAGTTGGTTGAAATGGGGGGACAGGAACACTCGGTGGTTTCATAATCATGCCTCGAGTAGGAGAAGGAAGAATGAGGTGAAGGGGTTGGAGGATGAGGATGGGGTTTGGCAACAGGATCCTAACAGAATCTTGGGACTTATAGAGTGGTACTTCAAGCACTTGTATATGACATCGCACCATTCGAATGAGGAGATAGATCAGGCCCTGTTACATTTGCTTCCCTCGGTTACGAACGAGATGAACAGTAAGCTTCTACGCCCGTTTCAGTAG

Protein sequence

MEVKFSLISYSTNHIDGWVDGGASPWRFTGIYGHPQPKQKTRTWTLMKHLRGNSETSWLVGEILMHCCLTMRMRVEGQSRLGSCLVSERRWMCGFKEAVSANWDPNDSVGSPMALASATERCMSGLSKWGRPRMGNFRHHIQEATDQVQRAMERLGSVGSQTNLQNVEERLESLLVEEEMYRKQRSRDSWLKWGDRNTRWFHNHASSRRRKNEVKGLEDEDGVWQQDPNRILGLIEWYFKHLYMTSHHSNEEIDQALLHLLPSVTNEMNSKLLRPFQ
Homology
[Close]
BLAST of Lcy04g004330 vs. ExPASy TrEMBL
Match: A0A803P3X4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 4.6e-27
Identity = 101/367 (27.52%), Postives = 155/367 (42.23%), Query Frame = 0 

Query: 2   EVKFSLISYSTNHIDGWVDG-GASPWRFTGIYGHPQPKQKTRTWTLMKHLRGNSETSWL- 61
           ++   ++S S  HI   V G G SPW FTG YG+P   Q+  +W L++ LR      WL 
Sbjct: 573 DISLKVMSSSPGHILATVVGVGFSPWYFTGFYGNPDTSQRRFSWQLLRDLRKEIWGPWLC 632

Query: 62  VGEILMHCCLTMRMRVEGQSRLGSCL--------------------------------VS 121
           +G+   +  +++  +V G+ RL   +                                + 
Sbjct: 633 IGD--FNEIMSLSEKVGGRDRLPGAMDGFKEVIDDCKPIDFSSFKHELTWCNEHSNSRIM 692

Query: 122 ER--------RWM---------------------------------CG---------FKE 181
           ER         W+                                 CG         F+E
Sbjct: 693 ERLDRGLCTEEWLSQFDGADISLLDWWESNHRALVVDMPVRVDGAKCGKTKRKTRFHFEE 752

Query: 182 A----------VSANWDPNDSVGSPMALASATERCMSGLSKWGRPRMGNFRHHIQEATDQ 241
           A          V   W  +   G P        +C      W + +       I E T +
Sbjct: 753 AWCQEEECVEIVDRVWKDSSGRGRPALFRCKVNKCGKAFHGWNKKKKLGLNSEI-EKTKK 812

Query: 242 VQRAMERLGSVGSQTNLQNVEERLESLLVEEEMYRKQRSRDSWLKWGDRNTRWFHNHASS 274
           +   +      G    +Q +E++L  LL ++E YR+QRSR  WLKWGDRNT++FH+ ASS
Sbjct: 813 ILHELTMQQQPGVWEMIQRMEDKLNGLLEKDEQYRRQRSRALWLKWGDRNTKYFHHKASS 872

[Close]
BLAST of Lcy04g004330 vs. ExPASy TrEMBL
Match: A0A2N9F5Y8 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10420 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 4.6e-27
Identity = 80/269 (29.74%), Postives = 131/269 (48.70%), Query Frame = 0 

Query: 18  WVDGGASPWRFTGIYGHPQPKQKTRTWTLMKHLRGNSETSW-LVGEI-------LMHCCL 77
           W D   +P    GIYG  +  +++ TWT++K L   +   W ++G +         H CL
Sbjct: 418 WDDENQAPNEDGGIYGASETSRRSDTWTMLKRLYRANPLPWCVIGRVEHVNVTNSDHKCL 477

Query: 78  TMRMRVEGQSRLGSCLVSERRWM--CGFKEAVSANWDPNDSVGSPMALASATERCMSGLS 137
            M        R       +  W+   G +E +   W+P+    +   +A+   +C   L 
Sbjct: 478 CMSWDCPTNKRHRKPFHFKEMWLEDMGCEETIRETWNPDPRGTTMFRVATKINQCKKSLG 537

Query: 138 KWGRPRMGNFRHHIQEATDQVQRAMERLGSVGSQTNLQNVEERLESLLVEEEMYRKQRSR 197
            W R   G+ R  + E   Q++ A     + G     +++   +  LL +EE   +QRSR
Sbjct: 538 DWSRRNFGSIRRQLVEKKKQLEDAEIMAMTGGGLEAAKSLRIEINELLKKEEKMWRQRSR 597

Query: 198 DSWLKWGDRNTRWFHNHASSRRRKNEVKGLEDEDGVWQQDPNRILGLIEWYFKHLYMTSH 257
            +WLK GDRNT++FH  AS RRR+N +K + D  G+WQ++ +++  +   YF+ L+ TS+
Sbjct: 598 STWLKEGDRNTKYFHGRASQRRRRNTIKRVRDSAGIWQENEDQVARVFLDYFRTLFTTSN 657

Query: 258 HSNEEIDQALLHLLPSVTNEMNSKLLRPF 277
             N  I++A+    P VT  MN  L R F
Sbjct: 658 PRN--IEEAVESTPPIVTQSMNDSLSRDF 684

[Close]
BLAST of Lcy04g004330 vs. ExPASy TrEMBL
Match: A0A2N9EWI8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6846 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.5e-25
Identity = 97/362 (26.80%), Postives = 151/362 (41.71%), Query Frame = 0 

Query: 9   SYSTNHIDGWVDG-GASPWRFTGIYGHPQPKQKTRTWTLMKHLRGNSETSWLV----GEI 68
           SYS +HID WV+      WRFTG YGHP    +  +W L++ L+G S+  WLV     EI
Sbjct: 525 SYSKHHIDSWVNSHSGEVWRFTGFYGHPITTCRRYSWELLRRLKGMSDRPWLVLGDFNEI 584

Query: 69  L----------------------MHCCLTMRMRVEG------------------------ 128
           +                      ++ CL + +  +G                        
Sbjct: 585 MSSDEKQGKLFRCPAQMAEFREALNDCLLLDLGFQGYEFTWTNNRDPPECVDERLDRGVA 644

Query: 129 --------------------QSRLGSCLVS------------------ERRWMC--GFKE 188
                                  +G  L S                  E  W+   G +E
Sbjct: 645 TEQWMDLFPCSRIQHVVFALSDHMGLVLNSEAVIQGPQRNSRKRRFHFEHAWLREEGCEE 704

Query: 189 AVSANWDPNDSVGSPMALASATERCMSGLSKWGRPRMGNFRHHIQEATDQVQRAMERLGS 248
            +S  W+ +    +   L+   ++C  GL  W +    N R   +   D+ +R  E  G 
Sbjct: 705 TISQAWETHQDGTAMFRLSQKIKQCRMGLISWSK---ANLRQIPKLIVDKRKRLDEIYGG 764

Query: 249 VGSQTNLQN---VEERLESLLVEEEMYRKQRSRDSWLKWGDRNTRWFHNHASSRRRKNEV 277
            GS  N      +   L SLL +EE+Y +QRSR +WL+ GDRNT +FH+ AS R++ N +
Sbjct: 765 DGSHVNYHEGRALRGELRSLLQKEEIYWRQRSRVAWLREGDRNTGYFHSCASQRKKTNTI 824

[Close]
BLAST of Lcy04g004330 vs. ExPASy TrEMBL
Match: A0A2N9EVP1 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6735 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 4.3e-25
Identity = 88/323 (27.24%), Postives = 146/323 (45.20%), Query Frame = 0 

Query: 2   EVKFSLISYSTNHIDGWVDG-GASPWRFTGIYGHPQPKQKTRTWTLMKHLRGNSETSWL- 61
           E +  + ++S +HID  V+      WR TG YG P+  +   +W L+KHL       WL 
Sbjct: 484 EAEIVIQNFSQHHIDAHVESQQVKCWRLTGFYGRPEHHRHKESWALLKHLSTMDSAPWLC 543

Query: 62  ---VGEIL----------------------MHCCLTMRMRVEG---------------QS 121
                E+L                      ++ C  + +   G               Q 
Sbjct: 544 LGDFNELLALHEKRGGNARSLRQILEFQDSVNACNFVDLGYRGASYTWNNNRDDEANIQG 603

Query: 122 RLGSCLVSER--RWMCGF-KEAVSANWDPNDSVGSPM-ALASATERCMSGLSKWGRPRMG 181
           RL   L +     W     K+ + ++W+    VGSPM  L     RC   L  W R   G
Sbjct: 604 RLDRALATSTLLDWFPQLVKKMIRSSWNQQVDVGSPMFQLCQKLSRCRKALVDWSRTVFG 663

Query: 182 NFRHHIQEATDQVQRAMERLGSVGSQTN--LQNVEERLESLLVEEEMYRKQRSRDSWLKW 241
                +Q   + ++   E   + G Q N  ++ +++ +  LL ++E++ +QRSR++WL+ 
Sbjct: 664 ALALQVQHKMEALESLHE--DNYGGQHNPQIRALQDEINMLLHQDELHWRQRSRETWLEA 723

Query: 242 GDRNTRWFHNHASSRRRKNEVKGLEDEDGVWQQDPNRILGLIEWYFKHLYMTSHHSNEEI 277
           GDRNT++FH  A  RR KN +KG+ D  G+W +D N +  +   YF  ++ +S  +  E+
Sbjct: 724 GDRNTKYFHQRAKQRRDKNTIKGILDSQGIWCEDENGMGDIAVQYFNEIFSSS--AGLEV 783

[Close]
BLAST of Lcy04g004330 vs. ExPASy TrEMBL
Match: A0A803PV25 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 3.7e-24
Identity = 93/369 (25.20%), Postives = 153/369 (41.46%), Query Frame = 0 

Query: 2   EVKFSLISYSTNHIDGWVDG-GASPWRFTGIYGHPQPKQKTRTWTLMKHLRGNSETSWL- 61
           +++  ++S S  HI   V G G  PW FTG YG+P   Q+  +W L++ LR   +  WL 
Sbjct: 618 DIQVQVLSSSPGHILATVAGCGFPPWSFTGFYGNPDAGQRRFSWQLLRDLRKEVQGPWLC 677

Query: 62  VGEILMHCCLTMRMRVEGQSRLGSCL--------------------------------VS 121
           +G+   +  +++  +V G+ RL   +                                + 
Sbjct: 678 IGD--FNEIVSLSEKVGGRDRLPGVMDGFKEVLDDCQFIDFSSTKHELTWCNEHSNSRIM 737

Query: 122 ER--------RWM---------------------------------CG---------FKE 181
           ER         W+                                 CG         F+E
Sbjct: 738 ERLDRGLCTEEWLDKFEGADISLLDWWESDHRALVVDIPVRLDGDKCGKAKRKSRFHFEE 797

Query: 182 A----------VSANWDPNDSVGSPMALASATERCMSGLSKWGRPRMGNFRHHIQEATDQ 241
           A          V   W   +  G   +      +C   L  W R +       + E   +
Sbjct: 798 AWCQEEECTEIVDRLWSEENVSGRVGSFRCKINKCGKALQTWNRKKKSKLNSEV-EKLKK 857

Query: 242 VQRAMERLGSVGSQTNLQNVEERLESLLVEEEMYRKQRSRDSWLKWGDRNTRWFHNHASS 277
               +  +   G    +Q +E +L  LL ++E Y +QRSR  WL+WGDRNT++FH+ AS+
Sbjct: 858 ALHELTMMQQPGVWETIQQMEAKLNGLLEKDEQYWRQRSRALWLQWGDRNTKYFHHKASA 917

[Close]
BLAST of Lcy04g004330 vs. NCBI nr
Match: XP_006487889.1 (uncharacterized protein LOC102617714 [Citrus sinensis])

HSP 1 Score: 131.7 bits (330), Expect = 9.6e-27
Identity = 82/284 (28.87%), Postives = 141/284 (49.65%), Query Frame = 0 

Query: 1   MEVKFSLISYSTNHIDGWV-DGGASPWRFTGIYGHPQPKQKTRTWTLMKHLRGNSETSWL 60
           ++V   + SYS +HID  + +   S WR T +YGHP+ +QK  TW+L++ L G S   WL
Sbjct: 74  LDVSLEVKSYSKHHIDAVIHNENGSSWRCTCVYGHPESEQKKHTWSLLRRLAGMSSLPWL 133

Query: 61  -VGEILMHCCLTMRMRVEGQSRLGSCL------VSERRWMCGFKEAVSANWDPNDSVGSP 120
             G+   +    +  +V G  R  S +      V + R +    +     W    +    
Sbjct: 134 CFGD--FNEIFNLNEKVGGNERNPSRVHEFRQAVRDCRLLDLGLKGYPFTWSNRRNEAKI 193

Query: 121 MALASATERCMSGLSKWGRPRMGNFRHHIQEATDQVQRAMERLGSVGSQTNLQNVEERLE 180
           +    A E  +  L  W +   G  +  +++  ++++              L+  E +++
Sbjct: 194 LFNKKARE-SLGELQLWSKKEFGGRQKQLEQLQNKLKSIRHSFSHYDCGDELKKTENQID 253

Query: 181 SLLVEEEMYRKQRSRDSWLKWGDRNTRWFHNHASSRRRKNEVKGLEDEDGVWQQDPNRIL 240
           ++L +EE++ KQRSR  WLK GD+NT++FH  AS+RR+KN + G+ DE G W +D + + 
Sbjct: 254 NILQDEEIFWKQRSRADWLKEGDKNTKFFHAKASARRKKNRIGGILDEQGKWTEDSDEVE 313

Query: 241 GLIEWYFKHLYMTSHHSNEEIDQALLHLLPSVTNEMNSKLLRPF 277
            +   +F  L+ T+  + E++D A       V  EMN +L  PF
Sbjct: 314 RIFCEHFTTLFSTTAPTAEQMDAAFKDTSAKVNEEMNFQLDAPF 354

[Close]
BLAST of Lcy04g004330 vs. NCBI nr
Match: XP_023883747.1 (uncharacterized protein LOC111996043 [Quercus suber])

HSP 1 Score: 129.8 bits (325), Expect = 3.6e-26
Identity = 99/342 (28.95%), Postives = 148/342 (43.27%), Query Frame = 0 

Query: 2   EVKFSLISYSTNHIDGWVDGG-ASPWRFTGIYGHPQPKQKTRTWTLMKHLRGNSETSWLV 61
           +++  + ++S NHID W+DGG    W FTG YGH    ++  +W  +K L+G S   WLV
Sbjct: 23  DLRVDVQTFSQNHIDAWMDGGELGWWHFTGFYGHSNTAKRHESWAKLKQLKGTSSLPWLV 82

Query: 62  ----GEIL-----MHCCLTMRMRVEG-QSRLGSC-------LVSERRWM----CGF---- 121
                EI+        C+  RM++E   S +  C       + S+  W+    CG     
Sbjct: 83  IGDFNEIVGLSEKESGCIHPRMQMEDFVSTIDYCGLCDLGFIGSKFTWIYQTTCGVQIRE 142

Query: 122 -----------------------------------------KEAVSANWDPNDSVGSPMA 181
                                                    ++ V   W+    VGS   
Sbjct: 143 RLDRALANLEWRSLYPMAKLHHLSSSVSDHSPLSLHLDSRCEKVVKDAWECGQLVGSDWV 202

Query: 182 LASATERCMSGLSKWGRPRMGNFRHHIQEATDQVQRAMERLGSVGSQTNLQNVEERLESL 241
           L    ERC   LS W   + G+    I E   +++    +  S      L++    L   
Sbjct: 203 LHDCLERCKVDLSTWNESKFGHVGRTIMELQSKLEWLELQPVSKEIVEALRHTRIELNCW 262

Query: 242 LVEEEMYRKQRSRDSWLKWGDRNTRWFHNHASSRRRKNEVKGLEDEDGVWQQDPNRILGL 277
           L  E+   +QRSR +W + GDRNTR+FH  AS+R+RKN + GL D+DGVWQ + +++  +
Sbjct: 263 LDREDDMWRQRSRINWFQNGDRNTRFFHAKASTRQRKNFMNGLVDDDGVWQVEEDKMAKI 322

[Close]
BLAST of Lcy04g004330 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 128.3 bits (321), Expect = 1.1e-25
Identity = 102/370 (27.57%), Postives = 151/370 (40.81%), Query Frame = 0 

Query: 2   EVKFSLISYSTNHIDGWVDG-GASPWRFTGIYGHPQPKQKTRTWTLMKHLRGNSETSWL- 61
           EV  ++ISYS +HID  + G     WR +GIYGHP+  QK  TWTL++ L G     WL 
Sbjct: 29  EVDVNIISYSNHHIDAVIHGVDGKIWRCSGIYGHPETIQKRHTWTLLRRLAGMFTWPWLC 88

Query: 62  ---VGEIL----------------------MHCCLTMRMRVEG------QSRLGSCLVSE 121
                EIL                      ++ C  + +   G        R G  L+ E
Sbjct: 89  FGDFNEILHPNEKLGGKDRNLDMVAAFRETVNDCNLIDLGCRGYPFTWSNRRFGPQLIEE 148

Query: 122 R-----------------------RWMCGF------------------------------ 181
           R                        W                                  
Sbjct: 149 RLDRFLGSKDWEQSPYNLIVSNLDTWCSDHSPVMLEMQERNKFAWYKKNSSPRVFYEDMW 208

Query: 182 ------KEAVSANW--DPNDSVGSPMALASAT-ERCMSGLSKWGRPRMGNFRHHIQEATD 241
                 K  V   W    + S G P+ +   T   C++ L  W R      +  +++   
Sbjct: 209 SHYEVCKNIVKEEWLKGGSWSQGDPVTIFKKTSNNCLAQLRIWSRNEFDGQKEKLKQLKK 268

Query: 242 QVQRAMERLGSVGSQTNLQNVEERLESLLVEEEMYRKQRSRDSWLKWGDRNTRWFHNHAS 277
           ++             + +++ EE++E +L++EE+Y KQRSR  WLK GD+NT++FH+ AS
Sbjct: 269 KLSEMKHNFTQREEVSEIKSTEEQIEKMLLDEEVYWKQRSRADWLKEGDKNTKYFHSKAS 328

[Close]
BLAST of Lcy04g004330 vs. NCBI nr
Match: XP_031101846.1 (uncharacterized protein LOC116005747 [Ipomoea triloba])

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-25
Identity = 88/284 (30.99%), Postives = 140/284 (49.30%), Query Frame = 0 

Query: 6   SLISYSTNHIDGWVD-GGASPWRFTGIYGHPQPKQKTRTWTLMKHLRGNSETSWLV---- 65
           +L+SYS N+ID  V   G +PWR T  YG+P+  ++  TW L++ L+  S   W+V    
Sbjct: 29  TLMSYSNNYIDITVTLPGETPWRLTCFYGYPERSRRQHTWDLLRELKSRSNLPWIVIGDF 88

Query: 66  GEILMHCCLTMRMR-----VEGQSR-LGSCLVSERRWMCGFKEAVSANWDPNDSVGSPMA 125
            +I  H      +      + G +  L  C + +    C  +E V  +W           
Sbjct: 89  NDIASHAKKRGSVNHLDNLIRGFNEVLQDCELFDLDPQC--REVVETSWFQTLGGDFQYR 148

Query: 126 LASATERCMSGLSKWGRPRMGNFRHHIQEATDQVQRAMERLGSVGSQTNLQNVEERLESL 185
           L S    C   L KWG      F   +Q+  ++++ A+     +       NVE  L +L
Sbjct: 149 LNS----CSQALWKWGSEHFRKFGKKVQQLREKLE-ALRNCSCMRDVEQYHNVERELSTL 208

Query: 186 LVEEEMYRKQRSRDSWLKWGDRNTRWFHNHASSRRRKNEVKGLEDEDGVWQQDPNRILGL 245
           L +EE+Y +QRS+  WLK GD+NT++FH  AS RRR N+++ L+   G W +  +    +
Sbjct: 209 LAQEELYWRQRSKQLWLKEGDQNTKYFHQFASQRRRSNQLRRLKRTSGQWVEGTDMHAEI 268

Query: 246 IEWYFKHLYMTSHHSNEEIDQALLHLLPS-VTNEMNSKLLRPFQ 278
           +  Y+  ++  S  + E     LLH +P  VT+EMN+ LLRP +
Sbjct: 269 MS-YYNFIFQKSGCNPE-----LLHRIPGRVTHEMNTALLRPIE 299

[Close]
BLAST of Lcy04g004330 vs. NCBI nr
Match: XP_023913015.1 (uncharacterized protein LOC112024634 [Quercus suber])

HSP 1 Score: 126.7 bits (317), Expect = 3.1e-25
Identity = 89/298 (29.87%), Postives = 141/298 (47.32%), Query Frame = 0 

Query: 2   EVKFSLISYSTNHIDGWVDGGA-SPWRFTGIYGHPQPKQKTRTWTLMKHLRGNSETSWLV 61
           E+   + +YS +HID +++ G    WRF G YG P    +  +W+L+K L   S   W+V
Sbjct: 75  EISLDIQTYSDHHIDAFINHGVDDAWRFMGFYGDPDTANREDSWSLLKALSQRSSYPWVV 134

Query: 62  ----GEILMHCCLTMRMRVEGQSRLGSCLVSERRWMCGFKEAVS-------------ANW 121
                EIL+            + + G     E + M  F+EA+                W
Sbjct: 135 LGDFNEILL-----------AEEKQGGLDWPEWQ-MLNFREALDFCSLKDLGFNGFPFTW 194

Query: 122 DPNDSVGSPMALASATERC-----MSGLSKWGRPRMGNFRHHIQEATDQVQRAMERLGSV 181
                        S  + C       GL +W R   G+    +Q++  ++++A E  G  
Sbjct: 195 CNRRPGFIEKVALSDLKLCDLRIVPEGLKEWNRNTFGHVLITLQKSLKELKQAEESDGYR 254

Query: 182 GSQTNLQNVEERLESLLVEEEMYRKQRSRDSWLKWGDRNTRWFHNHASSRRRKNEVKGLE 241
            +  ++  ++ R+E L   EE   +QRSR  WLK GD+NTR+FH  A+ R ++N + GLE
Sbjct: 255 NNPGHIFELQNRIEKLKRREECMWRQRSRLDWLKEGDKNTRFFHCKANQRNKRNYIAGLE 314

Query: 242 DEDGVWQQDPNRILGLIEWYFKHLYMTSHHSNEEIDQALLHLLPSVTNEMNSKLLRPF 277
           D+ G WQ + +R+  +IE YF  L+ T   +    D  L  + PS+T+EMN+ L R F
Sbjct: 315 DDTGTWQMEESRMGKIIEKYFGTLFTTLDPTG--FDDILCGIQPSITDEMNATLTREF 358

[Close]
BLAST of Lcy04g004330 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 55.5 bits (132), Expect = 8.1e-08
Identity = 42/155 (27.10%), Postives = 77/155 (49.68%), Query Frame = 0 

Query: 95  FKEAVSANWDPNDSVGSPM----ALASATERCMSGLSKWGRPRMGNFRHHIQEATDQVQR 154
           F  +++  W+    VGS M        A ++C   L++ G    GN +H  +EA D ++ 
Sbjct: 344 FLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQG---FGNIQHKTKEALDSLES 403

Query: 155 AMERLGSVGSQT--NLQNVEERLESLLVEE-EMYRKQRSRDSWLKWGDRNTRWFHNHASS 214
              +L +  S +   +++V  +  +      E + +Q+SR  WL+ GD NTR+FH    +
Sbjct: 404 IQSQLLTNPSDSLFRVEHVARKKWNFFAAALESFYRQKSRIKWLQDGDANTRFFHKVILA 463

Query: 215 RRRKNEVKGLEDEDGVWQQDPNRILGLIEWYFKHL 243
            + KN +K L  +D V  ++  ++  +I  Y+ HL
Sbjct: 464 NQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHL 495

The following BLAST results are available for this feature:
BLAST of Lcy04g004330 vs.
Match NameE-valueIdentityDescription
BLAST of Lcy04g004330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A803P3X44.6e-2727.52Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A2N9F5Y84.6e-2729.74Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A2N9EWI81.5e-2526.80Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS6846 PE=4 SV=1[more]
A0A2N9EVP14.3e-2527.24Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... [more]
A0A803PV253.7e-2425.20Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
BLAST of Lcy04g004330 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_006487889.19.6e-2728.87uncharacterized protein LOC102617714 [Citrus sinensis][more]
XP_023883747.13.6e-2628.95uncharacterized protein LOC111996043 [Quercus suber][more]
XP_024037590.11.1e-2527.57uncharacterized protein LOC112097210 [Citrus clementina][more]
XP_031101846.12.4e-2530.99uncharacterized protein LOC116005747 [Ipomoea triloba][more]
XP_023913015.13.1e-2529.87uncharacterized protein LOC112024634 [Quercus suber][more]
BLAST of Lcy04g004330 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G43760.18.1e-0827.10DNAse I-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 164..184
NoneNo IPR availablePANTHERPTHR33710:SF24SUBFAMILY NOT NAMEDcoord: 127..276
NoneNo IPR availablePANTHERPTHR33710BNAC02G09200D PROTEINcoord: 127..276

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g004330.1Lcy04g004330.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090304 nucleic acid metabolic process
molecular_function GO:0003824 catalytic activity