Lcy04g004140 (gene) Sponge gourd (P93075) v1

Overview
NameLcy04g004140
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr04: 28037336 .. 28038439 (-)
RNA-Seq ExpressionLcy04g004140
SyntenyLcy04g004140
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTTCTTCGTTCGCTTCCCGTCGTTTGCCACCGTTTATTATTTCCTTCTCCAACGTGTTCCTCCCACCGACGACCCTATCCTTTTCCACCAAAACAATCAATCCCATTTTCGAGTTCGATTTCAAGTTCAACAGCCCGGAGCCTCGTCCGATACAGACTAATTTCGACCCTTCTACTGTTCGTGAGGCGCTCGATTCTTACTGCAATGACTGGAGGCGTTCGTACGAGTTTTTCAACTGGGTTGAATCAAAATGTAAATTCGATCACACCACCGAGACCTATAATCGCATGCTCAACATTCTTGGTAAGTTCTTTGAGTTCGAGCTTTCGTGGGTTTTGATTCAGCGTATGCAACAATCCTTGTTTGCTTCTCCGCATCATGCGACGTTTCGCATTTTGTTTAAGCGTTACGCGTCGGCGCATTTGGTTACTGAAGCGATTGCTACTTATGAGAGATTGCGGGAGTTTAAATTGAGGGATGAGACTTCGTTTTGTAATCTTATTGACGCACTTTGTGAGTATAGACATGTAGTTGAAACTCAGGATTTGTGTTTTGGGAAGAACAAGAGGTTAGATTGTGATGCGAGTACGAAGATTCATAACTTGATTCTTCGTGGTTGGCTTAAGATGGGGTGGTGGAGTAAGTGTAGAGAGTTCTGGGAAGAAATGGATAAGAAGGGCGTTCGCAAGGATTTGCATTCGTATTCGATATATATGGATATACAATGTAAGAGCGAAAAGCCATGGAAGGCTGTTAAATTGTACAAGGAGATGAAAAAGAAGGGAATGAAATTGGATGTAGTCGCGTACAATACGATAATTCATGCCATTGGGATTTCAGAAGGCGTTGATTTTGCCAACCGGGTGTTTCATGAGATGAAGGAAATGGGATGTAAGCCTAATGTCATGACTTGCAATACTATTATTAAGCGATTTTGTGAGAATGGAAGATTCAAGGATGCCCATGTGATGCTTGATCAAATGCTTAAGAAGGACTGTCCACCGAATGTCATCACATATCATTATTTTTTCATTGCTCTTGAAAAGCCCAGAGAGATTCTTATGTTATTTGATACGATGATTAAATTTGGGGTTCATTAA

mRNA sequence

ATGCTTTCTTCGTTCGCTTCCCGTCGTTTGCCACCGTTTATTATTTCCTTCTCCAACGTGTTCCTCCCACCGACGACCCTATCCTTTTCCACCAAAACAATCAATCCCATTTTCGAGTTCGATTTCAAGTTCAACAGCCCGGAGCCTCGTCCGATACAGACTAATTTCGACCCTTCTACTGTTCGTGAGGCGCTCGATTCTTACTGCAATGACTGGAGGCGTTCGTACGAGTTTTTCAACTGGGTTGAATCAAAATGTAAATTCGATCACACCACCGAGACCTATAATCGCATGCTCAACATTCTTGGTAAGTTCTTTGAGTTCGAGCTTTCGTGGGTTTTGATTCAGCGTATGCAACAATCCTTGTTTGCTTCTCCGCATCATGCGACGTTTCGCATTTTGTTTAAGCGTTACGCGTCGGCGCATTTGGTTACTGAAGCGATTGCTACTTATGAGAGATTGCGGGAGTTTAAATTGAGGGATGAGACTTCGTTTTGTAATCTTATTGACGCACTTTGTGAGTATAGACATGTAGTTGAAACTCAGGATTTGTGTTTTGGGAAGAACAAGAGGTTAGATTGTGATGCGAGTACGAAGATTCATAACTTGATTCTTCGTGGTTGGCTTAAGATGGGGTGGTGGAGTAAGTGTAGAGAGTTCTGGGAAGAAATGGATAAGAAGGGCGTTCGCAAGGATTTGCATTCGTATTCGATATATATGGATATACAATGTAAGAGCGAAAAGCCATGGAAGGCTGTTAAATTGTACAAGGAGATGAAAAAGAAGGGAATGAAATTGGATGTAGTCGCGTACAATACGATAATTCATGCCATTGGGATTTCAGAAGGCGTTGATTTTGCCAACCGGGTGTTTCATGAGATGAAGGAAATGGGATGTAAGCCTAATGTCATGACTTGCAATACTATTATTAAGCGATTTTGTGAGAATGGAAGATTCAAGGATGCCCATGTGATGCTTGATCAAATGCTTAAGAAGGACTGTCCACCGAATGTCATCACATATCATTATTTTTTCATTGCTCTTGAAAAGCCCAGAGAGATTCTTATGTTATTTGATACGATGATTAAATTTGGGGTTCATTAA

Coding sequence (CDS)

ATGCTTTCTTCGTTCGCTTCCCGTCGTTTGCCACCGTTTATTATTTCCTTCTCCAACGTGTTCCTCCCACCGACGACCCTATCCTTTTCCACCAAAACAATCAATCCCATTTTCGAGTTCGATTTCAAGTTCAACAGCCCGGAGCCTCGTCCGATACAGACTAATTTCGACCCTTCTACTGTTCGTGAGGCGCTCGATTCTTACTGCAATGACTGGAGGCGTTCGTACGAGTTTTTCAACTGGGTTGAATCAAAATGTAAATTCGATCACACCACCGAGACCTATAATCGCATGCTCAACATTCTTGGTAAGTTCTTTGAGTTCGAGCTTTCGTGGGTTTTGATTCAGCGTATGCAACAATCCTTGTTTGCTTCTCCGCATCATGCGACGTTTCGCATTTTGTTTAAGCGTTACGCGTCGGCGCATTTGGTTACTGAAGCGATTGCTACTTATGAGAGATTGCGGGAGTTTAAATTGAGGGATGAGACTTCGTTTTGTAATCTTATTGACGCACTTTGTGAGTATAGACATGTAGTTGAAACTCAGGATTTGTGTTTTGGGAAGAACAAGAGGTTAGATTGTGATGCGAGTACGAAGATTCATAACTTGATTCTTCGTGGTTGGCTTAAGATGGGGTGGTGGAGTAAGTGTAGAGAGTTCTGGGAAGAAATGGATAAGAAGGGCGTTCGCAAGGATTTGCATTCGTATTCGATATATATGGATATACAATGTAAGAGCGAAAAGCCATGGAAGGCTGTTAAATTGTACAAGGAGATGAAAAAGAAGGGAATGAAATTGGATGTAGTCGCGTACAATACGATAATTCATGCCATTGGGATTTCAGAAGGCGTTGATTTTGCCAACCGGGTGTTTCATGAGATGAAGGAAATGGGATGTAAGCCTAATGTCATGACTTGCAATACTATTATTAAGCGATTTTGTGAGAATGGAAGATTCAAGGATGCCCATGTGATGCTTGATCAAATGCTTAAGAAGGACTGTCCACCGAATGTCATCACATATCATTATTTTTTCATTGCTCTTGAAAAGCCCAGAGAGATTCTTATGTTATTTGATACGATGATTAAATTTGGGGTTCATTAA

Protein sequence

MLSSFASRRLPPFIISFSNVFLPPTTLSFSTKTINPIFEFDFKFNSPEPRPIQTNFDPSTVREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQSLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETSFCNLIDALCEYRHVVETQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCKPNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILMLFDTMIKFGVH
Homology
BLAST of Lcy04g004140 vs. ExPASy Swiss-Prot
Match: Q9M8M3 (Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80550 PE=1 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 6.2e-117
Identity = 204/328 (62.20%), Postives = 252/328 (76.83%), Query Frame = 0

Query: 41  DFKFNSPEPRPIQTNFDPSTVREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLN 100
           D KF S E    Q+++D  TV EAL  Y NDW+++ EFFNWVE +  F HTTET+NR+++
Sbjct: 31  DAKFRSQEEED-QSSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVID 90

Query: 101 ILGKFFEFELSWVLIQRMQQSLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLR 160
           ILGK+FEFE+SW LI RM  +  + P+H TFRI+FKRY +AHLV EAI  Y++L +F LR
Sbjct: 91  ILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR 150

Query: 161 DETSFCNLIDALCEYRHVVETQDLCFGKNKRLD--CDASTKIHNLILRGWLKMGWWSKCR 220
           DETSF NL+DALCE++HVVE ++LCFGKN   +    ++TKIHNLILRGW K+GWW KC+
Sbjct: 151 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 210

Query: 221 EFWEEMDKKGVRKDLHSYSIYMDIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAI 280
           E+W++MD +GV KDL SYSIYMDI CKS KPWKAVKLYKEMK + MKLDVVAYNT+I AI
Sbjct: 211 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 270

Query: 281 GISEGVDFANRVFHEMKEMGCKPNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNV 340
           G S+GV+F  RVF EM+E GC+PNV T NTIIK  CE+GR +DA+ MLD+M K+ C P+ 
Sbjct: 271 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 330

Query: 341 ITYHYFFIALEKPREILMLFDTMIKFGV 367
           ITY   F  LEKP EIL LF  MI+ GV
Sbjct: 331 ITYMCLFSRLEKPSEILSLFGRMIRSGV 357

BLAST of Lcy04g004140 vs. ExPASy Swiss-Prot
Match: Q9LFQ4 (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)

HSP 1 Score: 163.3 bits (412), Expect = 5.2e-39
Identity = 98/308 (31.82%), Postives = 157/308 (50.97%), Query Frame = 0

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           V E L    NDW  ++ FF W   +  +  +   Y+ M++ILGK  +F+ +W LI  M++
Sbjct: 130 VVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK 189

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLR-DETSFCNLIDALCEYRHVV 180
              +  +  T  I+ ++Y + H V +AI T+   + FKL      F +L+ ALC Y++V 
Sbjct: 190 FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVS 249

Query: 181 ETQDLCFGKNKRLDCDASTKIHNLILRGWLK-MGWWSKCREFWEEMDKKGVRKDLHSYSI 240
           +   L F    +   DA  K  N++L GW   +G   +    W EM   GV+ D+ SYS 
Sbjct: 250 DAGHLIFCNKDKYPFDA--KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSS 309

Query: 241 YMDIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEM-KEM 300
            +    K     K +KL+  MKK+ ++ D   YN ++HA+  +  V  A  +   M +E 
Sbjct: 310 MISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK 369

Query: 301 GCKPNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILML 360
           G +PNV+T N++IK  C+  + ++A  + D+ML+K   P + TYH F   L    E+  L
Sbjct: 370 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFEL 429

Query: 361 FDTMIKFG 366
              M K G
Sbjct: 430 LAKMRKMG 435

BLAST of Lcy04g004140 vs. ExPASy Swiss-Prot
Match: Q9LIL5 (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana OX=3702 GN=At3g15200 PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 3.2e-33
Identity = 88/306 (28.76%), Postives = 154/306 (50.33%), Query Frame = 0

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           V E ++   +DW+ +Y     V  +     ++  YN +L++LGK   FE    +   M +
Sbjct: 112 VLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSK 171

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDE-TSFCNLIDALCEYRHVV 180
                 +  T+ +L  RYA+AH V EA+  +ER +EF + D+  +F  L+  LC Y+HV 
Sbjct: 172 R-DGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVE 231

Query: 181 ETQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIY 240
             + L   + +   CD   K  N+IL GW  +G   + + FW+++     R D+ SY   
Sbjct: 232 FAETLFCSRRREFGCD--IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTM 291

Query: 241 MDIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGC 300
           ++   K  K  KA++LY+ M       DV   N +I A+   + +  A  VF E+ E G 
Sbjct: 292 INALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGP 351

Query: 301 KPNVMTCNTIIKRFCENGRFKDAHVMLDQMLKK--DCPPNVITYHYFFIALEKPREILML 360
            PNV+T N+++K  C+  R +    ++++M  K   C PN +T+ Y     ++ +++ ++
Sbjct: 352 DPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIV 411

Query: 361 FDTMIK 364
            + M K
Sbjct: 412 LERMAK 414

BLAST of Lcy04g004140 vs. ExPASy Swiss-Prot
Match: Q9SSR6 (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g52640 PE=2 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.2e-33
Identity = 83/269 (30.86%), Postives = 142/269 (52.79%), Query Frame = 0

Query: 75  SYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQSLFASPHHATFRIL 134
           ++ FF W      F H+ E+Y+ ++ ILG   +F L W  +   ++  +       F I+
Sbjct: 85  AHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIV 144

Query: 135 FKRYASAHLVTEAIATYERLREFKLRD-ETSFCNLIDALCEYRHVVETQDLCFGKNKRLD 194
           F+ Y+ A+L +EA   + R+ EF ++        L+ +LC+ +HV   Q+  FGK K   
Sbjct: 145 FRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEF-FGKAKGFG 204

Query: 195 CDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSEKPWKAV 254
              S K +++++RGW ++   S  R+ ++EM ++    DL +Y+  +D  CKS       
Sbjct: 205 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 264

Query: 255 KLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCKPNVMTCNTIIKRF 314
           K+++EM   G+K D  ++   IHA   +  V  A +V   MK     PNV T N IIK  
Sbjct: 265 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTL 324

Query: 315 CENGRFKDAHVMLDQMLKKDCPPNVITYH 343
           C+N +  DA+++LD+M++K   P+  TY+
Sbjct: 325 CKNEKVDDAYLLLDEMIQKGANPDTWTYN 352

BLAST of Lcy04g004140 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.5e-33
Identity = 86/308 (27.92%), Postives = 155/308 (50.32%), Query Frame = 0

Query: 58  PSTVREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQR 117
           P+ + E L    N    +   F W E++  F HTT  YN ++  LGK  +F+L W L+  
Sbjct: 94  PALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDD 153

Query: 118 MQQSLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETS-FCNLIDALCEYR 177
           M+     S    TF ++ +RYA A  V EAI  + ++ EF  + E+S F  ++D L + R
Sbjct: 154 MKAKKLLSKE--TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSR 213

Query: 178 HVVETQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSY 237
           +V + Q + F K K+   +   K + ++L GW +     +  E   EM  +G   D+ +Y
Sbjct: 214 NVGDAQKV-FDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAY 273

Query: 238 SIYMDIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKE 297
            I ++  CK++K  +A++ + EM+++  K     + ++I+ +G  + ++ A   F   K 
Sbjct: 274 GIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKS 333

Query: 298 MGCKPNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYH---YFFIALEKPRE 357
            G      T N ++  +C + R +DA+  +D+M  K   PN  TY    +  I +++ +E
Sbjct: 334 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 393

Query: 358 ILMLFDTM 362
              ++ TM
Sbjct: 394 AYEVYQTM 398

BLAST of Lcy04g004140 vs. ExPASy TrEMBL
Match: A0A6J1D599 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111017413 PE=4 SV=1)

HSP 1 Score: 688.7 bits (1776), Expect = 1.3e-194
Identity = 326/367 (88.83%), Postives = 341/367 (92.92%), Query Frame = 0

Query: 1   MLSSFASRRLPPFIISFSNVFLPPTTLSFSTKTINPIFEFDFKFNSPEPRPIQTNFDPST 60
           MLSS ASRR PPFI+SFS V LPP  L FSTKT  PI E D KFNSPE RP+QTNFDPST
Sbjct: 1   MLSSLASRRFPPFILSFSEVLLPPGNLLFSTKTAAPISELDCKFNSPERRPVQTNFDPST 60

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           VREALDSYCNDWRRS+EFFNWVES+CKFDHTTETYNRML+ILGKFFEF++SWVL+QRMQQ
Sbjct: 61  VREALDSYCNDWRRSFEFFNWVESECKFDHTTETYNRMLDILGKFFEFDISWVLVQRMQQ 120

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           S FASP HATFRILFKRYASAHLVTEAIA YER REFKLRDETSFCNLIDALCEYRHVVE
Sbjct: 121 SAFASPDHATFRILFKRYASAHLVTEAIAAYERSREFKLRDETSFCNLIDALCEYRHVVE 180

Query: 181 TQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
            QDLCFGKNK++DC+ASTKIHNLILRGWLKMGWWSKCREFWEEMD KGVRKDLHSYSIYM
Sbjct: 181 AQDLCFGKNKKVDCNASTKIHNLILRGWLKMGWWSKCREFWEEMDNKGVRKDLHSYSIYM 240

Query: 241 DIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCK 300
           DIQCKS KPWKAVKLYKEMKKKGMKLDVVAYNT+IHAIGISEGVDFA+RVFHEMKEMGCK
Sbjct: 241 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300

Query: 301 PNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILMLFDT 360
           PNV+TCNTIIK FCENGRFKDAHVMLDQMLKKDCPPNVITYH FF + EKP EILMLFD 
Sbjct: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSFEKPNEILMLFDR 360

Query: 361 MIKFGVH 368
           MIKFGVH
Sbjct: 361 MIKFGVH 367

BLAST of Lcy04g004140 vs. ExPASy TrEMBL
Match: A0A6J1GNU3 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455781 PE=4 SV=1)

HSP 1 Score: 677.2 bits (1746), Expect = 3.9e-191
Identity = 321/366 (87.70%), Postives = 340/366 (92.90%), Query Frame = 0

Query: 1   MLSSFASRRLPPFIISFSNVFLPPTTLSFSTKTINPIFEFDFKFNSPEPRPIQTNFDPST 60
           MLSSFASRR PP I SFS+VFLP   + FSTKT NPI EF F FN+PE RP QTNFDP T
Sbjct: 18  MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNTPEDRPTQTNFDPPT 77

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           VREALDSYCNDWRRSYEFFNWVES+CKFDHTTETYNRML+ILGKFFEF+LSW LIQRM Q
Sbjct: 78  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 137

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           S FASP HATFRI+FKRYASAHLV+EAIA YERLREFKLRDETSFCNLID+LCEYRHVVE
Sbjct: 138 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDSLCEYRHVVE 197

Query: 181 TQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
            QDLCFGKN++L+CDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 198 AQDLCFGKNRKLNCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 257

Query: 241 DIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCK 300
           DIQCKS KPWKAVKLYKEMKKKGMKLDVVAYNT+IHAIGISEGVDFA+RVFHEMKEMGCK
Sbjct: 258 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 317

Query: 301 PNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILMLFDT 360
           PNV+TCNTIIK FCENGRFKDAH+MLDQMLKKDC PNVITYH FF +LEKP+EILMLFD 
Sbjct: 318 PNVVTCNTIIKLFCENGRFKDAHMMLDQMLKKDCLPNVITYHCFFRSLEKPKEILMLFDR 377

Query: 361 MIKFGV 367
           MIK+GV
Sbjct: 378 MIKYGV 383

BLAST of Lcy04g004140 vs. ExPASy TrEMBL
Match: A0A6J1JMZ1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111488358 PE=4 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 8.2e-189
Identity = 319/366 (87.16%), Postives = 336/366 (91.80%), Query Frame = 0

Query: 1   MLSSFASRRLPPFIISFSNVFLPPTTLSFSTKTINPIFEFDFKFNSPEPRPIQTNFDPST 60
           MLSSFASRR  P I SFS+VFLP   + FSTKT NPI  F F FN+PE RP QTNFDP T
Sbjct: 18  MLSSFASRRFSPSIFSFSDVFLPAAAILFSTKTTNPISVFGFNFNTPEDRPTQTNFDPPT 77

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           VREALDSYCNDWRRSYEFFNWVES+CKFDHTTETYNRML+ILGKFFEF+LSW LIQRM Q
Sbjct: 78  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 137

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           S FASP HATFRI+FKRYASAHLV+EAIA YERLREFKLRDETSFCNLIDALCEYRHVVE
Sbjct: 138 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 197

Query: 181 TQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
            QDLCFGKN++L+CDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 198 AQDLCFGKNRKLNCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 257

Query: 241 DIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCK 300
           DIQCKS KPWKAVKLYKEMKKKGMKLDVVAYNT+IHAIGISEGVDFA+RVF EMKEMGCK
Sbjct: 258 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFQEMKEMGCK 317

Query: 301 PNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILMLFDT 360
           PNV+TCNTIIK FCENGRFKDAH ML QMLKKDCPPNVITYH FF +LEKP+EILMLFD 
Sbjct: 318 PNVVTCNTIIKLFCENGRFKDAHKMLHQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 377

Query: 361 MIKFGV 367
           MIK+GV
Sbjct: 378 MIKYGV 383

BLAST of Lcy04g004140 vs. ExPASy TrEMBL
Match: A0A1S3CFA1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499823 PE=4 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 3.9e-183
Identity = 308/367 (83.92%), Postives = 332/367 (90.46%), Query Frame = 0

Query: 1   MLSSFASRRLPPFIISFSNVFLPPTTLSFSTKTINPIFEFDFKFNSPEPRPIQTNFDPST 60
           ML SFASRR           FLPP T+ FSTKTINPI EFDFKFN+ E RP   NFDPST
Sbjct: 1   MLFSFASRR-----------FLPPATIFFSTKTINPIPEFDFKFNTSERRPTHANFDPST 60

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           VREALDSYCNDW+RSYEFFNWVES+CKFDHTTETYNRML+ILGKFFEF+LSWVLI RM+Q
Sbjct: 61  VREALDSYCNDWKRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQ 120

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           S FA P H TFRILFKRYA+AHLVTEAIA YERLREFKLRDETSFCNLIDALCE RHV E
Sbjct: 121 SPFAPPDHTTFRILFKRYAAAHLVTEAIAAYERLREFKLRDETSFCNLIDALCESRHVDE 180

Query: 181 TQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
            Q+LCFGKN+RLDCD+STKIHNLILRGWLKMGWWSKCR+FWEEMDKKGVRKDLHSYSIYM
Sbjct: 181 AQELCFGKNRRLDCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYM 240

Query: 241 DIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCK 300
           DIQCKS KPWKAVKLYKEMK+KGMKLDVVAYNT+IHA+GISEGVDFA+RVFHEMKEMGCK
Sbjct: 241 DIQCKSGKPWKAVKLYKEMKQKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCK 300

Query: 301 PNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILMLFDT 360
           PNV+TCNT+IK FCENGRFKDAH+MLDQMLK+DC PNVITYH FF +LEKP+EIL+LFD 
Sbjct: 301 PNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILILFDR 356

Query: 361 MIKFGVH 368
           MIK+GVH
Sbjct: 361 MIKYGVH 356

BLAST of Lcy04g004140 vs. ExPASy TrEMBL
Match: A0A5A7UVK9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001970 PE=4 SV=1)

HSP 1 Score: 650.2 bits (1676), Expect = 5.1e-183
Identity = 308/367 (83.92%), Postives = 332/367 (90.46%), Query Frame = 0

Query: 1   MLSSFASRRLPPFIISFSNVFLPPTTLSFSTKTINPIFEFDFKFNSPEPRPIQTNFDPST 60
           ML SFASRR           FLPP T+ FSTKTINPI EFDFKFN+ E RP   NFDPST
Sbjct: 1   MLFSFASRR-----------FLPPATIFFSTKTINPIPEFDFKFNTSERRPTHANFDPST 60

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           VREALDSYCNDW+RSYEFFNWVES+CKFDHTTETYNRML+ILGKFFEF+LSWVLI RM+Q
Sbjct: 61  VREALDSYCNDWKRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQ 120

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           S FA P H TFRILFKRYASAHLVTEAIA YERLREFKLRDETSFCNLIDALCE RHV E
Sbjct: 121 SPFAPPDHTTFRILFKRYASAHLVTEAIAAYERLREFKLRDETSFCNLIDALCESRHVDE 180

Query: 181 TQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
            Q+LCFGKN+RLDCD+STKIHNLILRGWLKMGWWSKCR+FWEEMDKKGVRKDLHSYSIYM
Sbjct: 181 AQELCFGKNRRLDCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYM 240

Query: 241 DIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCK 300
           DI+CKS KPWKAVKLYKEMK+KGMKLDVVAYNT+IHA+GISEGVDFA+RVFHEMKEMGCK
Sbjct: 241 DIRCKSGKPWKAVKLYKEMKQKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCK 300

Query: 301 PNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILMLFDT 360
           PNV+TCNT+IK FCENGRFKDAH+MLDQMLK+DC PNVITYH FF +LEKP+EIL+LFD 
Sbjct: 301 PNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILILFDR 356

Query: 361 MIKFGVH 368
           MIK+GVH
Sbjct: 361 MIKYGVH 356

BLAST of Lcy04g004140 vs. NCBI nr
Match: XP_022148858.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Momordica charantia])

HSP 1 Score: 688.7 bits (1776), Expect = 2.7e-194
Identity = 326/367 (88.83%), Postives = 341/367 (92.92%), Query Frame = 0

Query: 1   MLSSFASRRLPPFIISFSNVFLPPTTLSFSTKTINPIFEFDFKFNSPEPRPIQTNFDPST 60
           MLSS ASRR PPFI+SFS V LPP  L FSTKT  PI E D KFNSPE RP+QTNFDPST
Sbjct: 1   MLSSLASRRFPPFILSFSEVLLPPGNLLFSTKTAAPISELDCKFNSPERRPVQTNFDPST 60

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           VREALDSYCNDWRRS+EFFNWVES+CKFDHTTETYNRML+ILGKFFEF++SWVL+QRMQQ
Sbjct: 61  VREALDSYCNDWRRSFEFFNWVESECKFDHTTETYNRMLDILGKFFEFDISWVLVQRMQQ 120

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           S FASP HATFRILFKRYASAHLVTEAIA YER REFKLRDETSFCNLIDALCEYRHVVE
Sbjct: 121 SAFASPDHATFRILFKRYASAHLVTEAIAAYERSREFKLRDETSFCNLIDALCEYRHVVE 180

Query: 181 TQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
            QDLCFGKNK++DC+ASTKIHNLILRGWLKMGWWSKCREFWEEMD KGVRKDLHSYSIYM
Sbjct: 181 AQDLCFGKNKKVDCNASTKIHNLILRGWLKMGWWSKCREFWEEMDNKGVRKDLHSYSIYM 240

Query: 241 DIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCK 300
           DIQCKS KPWKAVKLYKEMKKKGMKLDVVAYNT+IHAIGISEGVDFA+RVFHEMKEMGCK
Sbjct: 241 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300

Query: 301 PNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILMLFDT 360
           PNV+TCNTIIK FCENGRFKDAHVMLDQMLKKDCPPNVITYH FF + EKP EILMLFD 
Sbjct: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSFEKPNEILMLFDR 360

Query: 361 MIKFGVH 368
           MIKFGVH
Sbjct: 361 MIKFGVH 367

BLAST of Lcy04g004140 vs. NCBI nr
Match: XP_022953157.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata] >XP_022953158.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata] >XP_022953159.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata])

HSP 1 Score: 677.2 bits (1746), Expect = 8.1e-191
Identity = 321/366 (87.70%), Postives = 340/366 (92.90%), Query Frame = 0

Query: 1   MLSSFASRRLPPFIISFSNVFLPPTTLSFSTKTINPIFEFDFKFNSPEPRPIQTNFDPST 60
           MLSSFASRR PP I SFS+VFLP   + FSTKT NPI EF F FN+PE RP QTNFDP T
Sbjct: 18  MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNTPEDRPTQTNFDPPT 77

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           VREALDSYCNDWRRSYEFFNWVES+CKFDHTTETYNRML+ILGKFFEF+LSW LIQRM Q
Sbjct: 78  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 137

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           S FASP HATFRI+FKRYASAHLV+EAIA YERLREFKLRDETSFCNLID+LCEYRHVVE
Sbjct: 138 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDSLCEYRHVVE 197

Query: 181 TQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
            QDLCFGKN++L+CDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 198 AQDLCFGKNRKLNCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 257

Query: 241 DIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCK 300
           DIQCKS KPWKAVKLYKEMKKKGMKLDVVAYNT+IHAIGISEGVDFA+RVFHEMKEMGCK
Sbjct: 258 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 317

Query: 301 PNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILMLFDT 360
           PNV+TCNTIIK FCENGRFKDAH+MLDQMLKKDC PNVITYH FF +LEKP+EILMLFD 
Sbjct: 318 PNVVTCNTIIKLFCENGRFKDAHMMLDQMLKKDCLPNVITYHCFFRSLEKPKEILMLFDR 377

Query: 361 MIKFGV 367
           MIK+GV
Sbjct: 378 MIKYGV 383

BLAST of Lcy04g004140 vs. NCBI nr
Match: KAG7014158.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 674.9 bits (1740), Expect = 4.0e-190
Identity = 321/366 (87.70%), Postives = 338/366 (92.35%), Query Frame = 0

Query: 1   MLSSFASRRLPPFIISFSNVFLPPTTLSFSTKTINPIFEFDFKFNSPEPRPIQTNFDPST 60
           MLSSFASRR PP I SFS+VFLP   + FSTKT NPI EF F FNS + RP QTNFDP T
Sbjct: 1   MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPT 60

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           VREALDSYCNDWRRSYEFFNWVES+CKFDHTTETYNRML+ILGKFFEF+LSW LIQRM Q
Sbjct: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           S FASP HATFRI+FKRYASAHLV+EAIA YERLREFKLRDETSFCNLIDALCEYRHVVE
Sbjct: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 180

Query: 181 TQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
            QDLCFGKN+ L+C ASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 181 AQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240

Query: 241 DIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCK 300
           DIQCKS KPWKAVKLYKEMKKKGMKLDVVAYNT+IHAIGISEGVDFA+RVFHEMKEMGCK
Sbjct: 241 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300

Query: 301 PNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILMLFDT 360
           PNV+TCNTIIK FCENGRFKDAH+MLDQMLKKDCPPNVITYH FF +LEKP+EILMLFD 
Sbjct: 301 PNVVTCNTIIKLFCENGRFKDAHMMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360

Query: 361 MIKFGV 367
           MIK+GV
Sbjct: 361 MIKYGV 366

BLAST of Lcy04g004140 vs. NCBI nr
Match: KAG6575615.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 674.9 bits (1740), Expect = 4.0e-190
Identity = 321/366 (87.70%), Postives = 338/366 (92.35%), Query Frame = 0

Query: 1   MLSSFASRRLPPFIISFSNVFLPPTTLSFSTKTINPIFEFDFKFNSPEPRPIQTNFDPST 60
           MLSSFASRR PP I SFS+VFLP   + FSTKT NPI EF F FNS + RP QTNFDP T
Sbjct: 1   MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPT 60

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           VREALDSYCNDWRRSYEFFNWVES+CKFDHTTETYNRML+ILGKFFEF+LSW LIQRM Q
Sbjct: 61  VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           S FASP HATFRI+FKRYASAHLV+EAIA YERLREFKLRDETSFCNLIDALCEYRHVVE
Sbjct: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 180

Query: 181 TQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
            QDLCFGKN+ L+C ASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 181 AQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240

Query: 241 DIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCK 300
           DIQCKS KPWKAVKLYKEMKKKGMKLDVVAYNT+IHAIGISEGVDFA+RVFHEMKEMGCK
Sbjct: 241 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300

Query: 301 PNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILMLFDT 360
           PNV+TCNTIIK FCENGRFKDAH+MLDQMLKKDCPPNVITYH FF +LEKP+EILMLFD 
Sbjct: 301 PNVVTCNTIIKLFCENGRFKDAHMMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360

Query: 361 MIKFGV 367
           MIK+GV
Sbjct: 361 MIKYGV 366

BLAST of Lcy04g004140 vs. NCBI nr
Match: XP_023547614.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023547616.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 672.5 bits (1734), Expect = 2.0e-189
Identity = 320/366 (87.43%), Postives = 337/366 (92.08%), Query Frame = 0

Query: 1   MLSSFASRRLPPFIISFSNVFLPPTTLSFSTKTINPIFEFDFKFNSPEPRPIQTNFDPST 60
           MLSSFASRR PP I SFS+VFLP   + FSTKT NPI EF F FN+PE RP QTNFDP T
Sbjct: 18  MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNTPEDRPTQTNFDPPT 77

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           VREALDSYCNDWR SYEFFNWVES+CKFDHTTETYNRML+ILGKFFEF+LSW LIQRM Q
Sbjct: 78  VREALDSYCNDWRCSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 137

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETSFCNLIDALCEYRHVVE 180
           S FASP HATFRI+FKRYASAHLV+EAIA YERLREFKLRDETSFCNLIDALCEYRHVVE
Sbjct: 138 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 197

Query: 181 TQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
            QDLCFGKN++L+C ASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 198 AQDLCFGKNRKLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 257

Query: 241 DIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCK 300
           DIQCKS KPWKAVKLYKEMKKKGMKLDVVAYNT+IHAIGISEGVDFA+RVF EMKEMGCK
Sbjct: 258 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFQEMKEMGCK 317

Query: 301 PNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILMLFDT 360
           PNV+TCNTIIK FCENGRFKDAH+MLDQMLKKDCPPNVITYH FF +LEKP EILMLFD 
Sbjct: 318 PNVVTCNTIIKLFCENGRFKDAHMMLDQMLKKDCPPNVITYHCFFRSLEKPNEILMLFDR 377

Query: 361 MIKFGV 367
           MIK+GV
Sbjct: 378 MIKYGV 383

BLAST of Lcy04g004140 vs. TAIR 10
Match: AT1G80550.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 422.2 bits (1084), Expect = 4.4e-118
Identity = 204/328 (62.20%), Postives = 252/328 (76.83%), Query Frame = 0

Query: 41  DFKFNSPEPRPIQTNFDPSTVREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLN 100
           D KF S E    Q+++D  TV EAL  Y NDW+++ EFFNWVE +  F HTTET+NR+++
Sbjct: 31  DAKFRSQEEED-QSSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVID 90

Query: 101 ILGKFFEFELSWVLIQRMQQSLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLR 160
           ILGK+FEFE+SW LI RM  +  + P+H TFRI+FKRY +AHLV EAI  Y++L +F LR
Sbjct: 91  ILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLR 150

Query: 161 DETSFCNLIDALCEYRHVVETQDLCFGKNKRLD--CDASTKIHNLILRGWLKMGWWSKCR 220
           DETSF NL+DALCE++HVVE ++LCFGKN   +    ++TKIHNLILRGW K+GWW KC+
Sbjct: 151 DETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCK 210

Query: 221 EFWEEMDKKGVRKDLHSYSIYMDIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAI 280
           E+W++MD +GV KDL SYSIYMDI CKS KPWKAVKLYKEMK + MKLDVVAYNT+I AI
Sbjct: 211 EYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAI 270

Query: 281 GISEGVDFANRVFHEMKEMGCKPNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNV 340
           G S+GV+F  RVF EM+E GC+PNV T NTIIK  CE+GR +DA+ MLD+M K+ C P+ 
Sbjct: 271 GASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDS 330

Query: 341 ITYHYFFIALEKPREILMLFDTMIKFGV 367
           ITY   F  LEKP EIL LF  MI+ GV
Sbjct: 331 ITYMCLFSRLEKPSEILSLFGRMIRSGV 357

BLAST of Lcy04g004140 vs. TAIR 10
Match: AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 3.7e-40
Identity = 98/308 (31.82%), Postives = 157/308 (50.97%), Query Frame = 0

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           V E L    NDW  ++ FF W   +  +  +   Y+ M++ILGK  +F+ +W LI  M++
Sbjct: 130 VVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK 189

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLR-DETSFCNLIDALCEYRHVV 180
              +  +  T  I+ ++Y + H V +AI T+   + FKL      F +L+ ALC Y++V 
Sbjct: 190 FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVS 249

Query: 181 ETQDLCFGKNKRLDCDASTKIHNLILRGWLK-MGWWSKCREFWEEMDKKGVRKDLHSYSI 240
           +   L F    +   DA  K  N++L GW   +G   +    W EM   GV+ D+ SYS 
Sbjct: 250 DAGHLIFCNKDKYPFDA--KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSS 309

Query: 241 YMDIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEM-KEM 300
            +    K     K +KL+  MKK+ ++ D   YN ++HA+  +  V  A  +   M +E 
Sbjct: 310 MISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK 369

Query: 301 GCKPNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYHYFFIALEKPREILML 360
           G +PNV+T N++IK  C+  + ++A  + D+ML+K   P + TYH F   L    E+  L
Sbjct: 370 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFEL 429

Query: 361 FDTMIKFG 366
              M K G
Sbjct: 430 LAKMRKMG 435

BLAST of Lcy04g004140 vs. TAIR 10
Match: AT3G15200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 144.1 bits (362), Expect = 2.3e-34
Identity = 88/306 (28.76%), Postives = 154/306 (50.33%), Query Frame = 0

Query: 61  VREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQ 120
           V E ++   +DW+ +Y     V  +     ++  YN +L++LGK   FE    +   M +
Sbjct: 112 VLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSK 171

Query: 121 SLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDE-TSFCNLIDALCEYRHVV 180
                 +  T+ +L  RYA+AH V EA+  +ER +EF + D+  +F  L+  LC Y+HV 
Sbjct: 172 R-DGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVE 231

Query: 181 ETQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIY 240
             + L   + +   CD   K  N+IL GW  +G   + + FW+++     R D+ SY   
Sbjct: 232 FAETLFCSRRREFGCD--IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTM 291

Query: 241 MDIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGC 300
           ++   K  K  KA++LY+ M       DV   N +I A+   + +  A  VF E+ E G 
Sbjct: 292 INALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGP 351

Query: 301 KPNVMTCNTIIKRFCENGRFKDAHVMLDQMLKK--DCPPNVITYHYFFIALEKPREILML 360
            PNV+T N+++K  C+  R +    ++++M  K   C PN +T+ Y     ++ +++ ++
Sbjct: 352 DPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIV 411

Query: 361 FDTMIK 364
            + M K
Sbjct: 412 LERMAK 414

BLAST of Lcy04g004140 vs. TAIR 10
Match: AT1G52640.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 143.7 bits (361), Expect = 3.0e-34
Identity = 83/269 (30.86%), Postives = 142/269 (52.79%), Query Frame = 0

Query: 75  SYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQRMQQSLFASPHHATFRIL 134
           ++ FF W      F H+ E+Y+ ++ ILG   +F L W  +   ++  +       F I+
Sbjct: 85  AHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIV 144

Query: 135 FKRYASAHLVTEAIATYERLREFKLRD-ETSFCNLIDALCEYRHVVETQDLCFGKNKRLD 194
           F+ Y+ A+L +EA   + R+ EF ++        L+ +LC+ +HV   Q+  FGK K   
Sbjct: 145 FRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEF-FGKAKGFG 204

Query: 195 CDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSEKPWKAV 254
              S K +++++RGW ++   S  R+ ++EM ++    DL +Y+  +D  CKS       
Sbjct: 205 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 264

Query: 255 KLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKEMGCKPNVMTCNTIIKRF 314
           K+++EM   G+K D  ++   IHA   +  V  A +V   MK     PNV T N IIK  
Sbjct: 265 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTL 324

Query: 315 CENGRFKDAHVMLDQMLKKDCPPNVITYH 343
           C+N +  DA+++LD+M++K   P+  TY+
Sbjct: 325 CKNEKVDDAYLLLDEMIQKGANPDTWTYN 352

BLAST of Lcy04g004140 vs. TAIR 10
Match: AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 143.3 bits (360), Expect = 3.9e-34
Identity = 86/308 (27.92%), Postives = 155/308 (50.32%), Query Frame = 0

Query: 58  PSTVREALDSYCNDWRRSYEFFNWVESKCKFDHTTETYNRMLNILGKFFEFELSWVLIQR 117
           P+ + E L    N    +   F W E++  F HTT  YN ++  LGK  +F+L W L+  
Sbjct: 94  PALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDD 153

Query: 118 MQQSLFASPHHATFRILFKRYASAHLVTEAIATYERLREFKLRDETS-FCNLIDALCEYR 177
           M+     S    TF ++ +RYA A  V EAI  + ++ EF  + E+S F  ++D L + R
Sbjct: 154 MKAKKLLSKE--TFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSR 213

Query: 178 HVVETQDLCFGKNKRLDCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSY 237
           +V + Q + F K K+   +   K + ++L GW +     +  E   EM  +G   D+ +Y
Sbjct: 214 NVGDAQKV-FDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAY 273

Query: 238 SIYMDIQCKSEKPWKAVKLYKEMKKKGMKLDVVAYNTIIHAIGISEGVDFANRVFHEMKE 297
            I ++  CK++K  +A++ + EM+++  K     + ++I+ +G  + ++ A   F   K 
Sbjct: 274 GIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKS 333

Query: 298 MGCKPNVMTCNTIIKRFCENGRFKDAHVMLDQMLKKDCPPNVITYH---YFFIALEKPRE 357
            G      T N ++  +C + R +DA+  +D+M  K   PN  TY    +  I +++ +E
Sbjct: 334 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 393

Query: 358 ILMLFDTM 362
              ++ TM
Sbjct: 394 AYEVYQTM 398

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Q9M8M36.2e-11762.20Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidop... [more]
Q9LFQ45.2e-3931.82Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop... [more]
Q9LIL53.2e-3328.76Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis th... [more]
Q9SSR64.2e-3330.86Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidop... [more]
Q9C9A25.5e-3327.92Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A6J1D5991.3e-19488.83pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Momordic... [more]
A0A6J1GNU33.9e-19187.70pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucurbit... [more]
A0A6J1JMZ18.2e-18987.16pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucurbit... [more]
A0A1S3CFA13.9e-18383.92pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucumis ... [more]
A0A5A7UVK95.1e-18383.92Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
XP_022148858.12.7e-19488.83pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Momordica ... [more]
XP_022953157.18.1e-19187.70pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita ... [more]
KAG7014158.14.0e-19087.70Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
KAG6575615.14.0e-19087.70Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... [more]
XP_023547614.12.0e-18987.43pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita ... [more]
Match NameE-valueIdentityDescription
AT1G80550.14.4e-11862.20Pentatricopeptide repeat (PPR) superfamily protein [more]
AT5G15010.13.7e-4031.82Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G15200.12.3e-3428.76Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G52640.13.0e-3430.86Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G71060.13.9e-3427.92Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 255..314
e-value: 3.3E-15
score: 55.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 200..231
e-value: 2.3E-4
score: 19.1
coord: 269..303
e-value: 3.2E-5
score: 21.8
coord: 305..338
e-value: 9.6E-10
score: 36.0
coord: 235..268
e-value: 0.0012
score: 16.9
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 202..229
e-value: 0.0079
score: 16.4
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 232..266
score: 10.117337
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 197..231
score: 9.262356
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 302..336
score: 12.123256
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 267..301
score: 11.191545
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 281..367
e-value: 9.7E-18
score: 66.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 186..280
e-value: 3.1E-18
score: 67.8
coord: 54..185
e-value: 1.9E-12
score: 48.9
NoneNo IPR availablePANTHERPTHR46128:SF230BNAC06G40430D PROTEINcoord: 40..366
NoneNo IPR availablePANTHERPTHR46128MITOCHONDRIAL GROUP I INTRON SPLICING FACTOR CCM1coord: 40..366

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy04g004140.1Lcy04g004140.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding