Lcy04g000850 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGCCAGGTTTTGGTGGGGTTCTATGGAAGGTAAAAAGAAAATTCACTGGAAGAAATGAGAATTTTTATGTTCCCCAAAGGAAGCAGGTGGATTGAATTTTCGTGATCTGGTGAATTTTAATAAAGCCTTGTTGGCAAAACAGGTTTGACGCTTATTCACAAACCCAAATCTTATGGTATCTAGAGTTATTTGTGGTAGGTATGCTTATGGTACAACATTACTCTCAACTCCAATTAAAGCTAATTGTTCATTTTTCTGGCGAAGTTGTGTTTGGGCTCGTGATTTACTTTCCAAGGGATTGCGTAAACAGGTAGGAAACGGAATGAGTATCCACTTCAACAATGATCCATGGATCCCAAAAGAAACCTCTTTAAAGCCAGTTCTTAAGGTGGCATCACAGGATTTTGAGGGTAGGATGGTATCGAACTTTATTACTCCTTCCAAGGCGTGGGATCTAATCAAGTTCAGAGAATATGTATGGGATGAGGATGTGCGGTTAATCTCAACTATTCATATTAGTACGGTAAATGACGAAGATAAAGGGATTTGACATTATTCTAACAATGGCGTTTATTCTGTTAAAAATGGATATAAGTTGGCCATGTTGTCTGCTGCGACTTGCGGTGAGTCAAGCATGAATATTCAAAAGAGTTGGTGGATGGTGCTATGGAAATCACAGCTGTCGTCTAAGGTTAAGCTGTTTATATGGAAAGCCTATCATGGTTGTTTACCGACAAATTACTGCCTGTGGAAAAGGAAGATCGAAATTTCGTCTATGTGCCATATGTGCGAAAAGAAGGTTGAGACAATCGATCATGCTTTATGTGGGTGTAAACGAGCCAAAGCAAGTTGTGATTGTATTTTCTCTCGGATTGATGGTAATATTGTGGTAAACAATAATTTTTCTGACCGTATTGTTTTCTTAGTAGGAAATCTGAGTGTGAACGAATTTGAAAAGGCGTGTATAGCGTTCTGGTCCATATGGAATAATCATAATGATTTTCGAGAGGGAAAGCCTATTGCCGATTGGCATCACCAATGTGAATGAATCATCAAATATTGGGAAGAGACCACTCAAAGACTGAAGGAGGCAGATGTTGTGACACTACTCCCAGATGTTCAACCAAATTCATAGTCTGATTGTGTTAAGGTATATACTGATGCAGCAATGTCTCCTACTTGTGATGGGGCAGGGTATGGTGCTCTTATTGTTGATAACGAGGATAACCTATGTGGAGCCATGGAGATGGTCGATAACGCAGCACTAAACCCCCTAGTTGTGGAGGTTCAAGCTATTTTACATGCTCTTCGATTGTTACGACAAATGGATATCTGAGAAGCTCAAGTATACTCAGATTCTTACAATACTATCAACATGATTAATAAGGTGTTAGATGTGTCGACTGATGTGGCTCATTGGATCATTAGCATACAGGATATGTGCAAAAGTTTTCAGTCTATTTCGTTTCATCATATTTCTAGGAATAGAAATTTTCGAGCGGATATTTTAGCTAAAAAGGCTTTAGCATGCAAGAGTACCATGTTGTGGCTATCAAATTTCCCACCATGGTTAGTGGCTTGGGCAATGCTGCCCATTGTTAATGTATTGATACTTGTGTTTGTTTGAATTAATGAAATCGTTTCCATTTCAGAAAAGAAGAAGAAAAAAAAAAAACTTCTAAAGGTTTGAGCAATCAAACAACTCCAACCATTTAAGAGGATTTAAATTAAAAATTCTAATCTAGAATGTTTTGGAGTTTTGAGCAACCAAAGAGACCCAAACCATGTAAGGGCTCATTCCGAATACTTTTTAGTTGGAGTGTTTTTTAGGAATCTTTTTTTTTTTTTTAAATAAAAATTGTCTATAATTTAAACACTCATATGTTCGGTTATATTTTTTAAAAAATGATTTTATACATAAATTTAATTTTTTTTGGTTTACTTCACATTCAAAATGCTTACACGGATGTCAAATTACTATGAAGGATGATTATTAAATATTATGAACTAGATACTAATAAATTCAAATTTGTATTTAAAATACTGACACTAGGAAAGGATCGTCAGAGTCGTCAGAGTGGTAGTCGGTGGTCGTCGGGAGATGGCAATGGCGGTGGTCATTAGAGGATGTTTGGTGGTGGCGGTGGTTGTTAAAGTGTCGTTGGTTGTGGCGGTGGTTGACGAAGTTTTGAGAGCGATGGTCGTTGAAATTATCGCTAGTGGTGAGTGGTAG ATGATGGCCAGGTATGCTTATGGTACAACATTACTCTCAACTCCAATTAAAGCTAATTGTTCATTTTTCTGGCGAAGTTGTGTTTGGGCTCGTGATTTACTTTCCAAGGGATTGCGTAAACAGGTAGGAAACGGAATGAGTATCCACTTCAACAATGATCCATGGATCCCAAAAGAAACCTCTTTAAAGCCAGTTCTTAAGGTGGCATCACAGGATTTTGAGGGTAGGATGGTATCGAACTTTATTACTCCTTCCAAGGCGTGGGATCTAATCAAGTTCAGAGAATATGTATGGGATGAGGATGTGCGGTTAATCTCAACTATTCATATTAGTACGGTATATACTGATGCAGCAATGTCTCCTACTTGTGATGGGGCAGGGTATGGTGCTCTTATTGTTGATAACGAGGATAACCTATGTGGAGCCATGGAGATGGTCGATAACGCAGCACTAAACCCCCTAGTTGTGGAGGAAAGGATCGTCAGAGTCGTCAGAGTGGTAGTCGGTGGTCGTCGGGAGATGGCAATGGCGGTGGTCATTAGAGGATGTTTGGTGGTGGCGGTGGTTGTTAAAGTGTCGTTGGTTGTGGCGGTGGTTGACGAAGTTTTGAGAGCGATGGTCGTTGAAATTATCGCTAGTGGTGAGTGGTAG ATGATGGCCAGGTATGCTTATGGTACAACATTACTCTCAACTCCAATTAAAGCTAATTGTTCATTTTTCTGGCGAAGTTGTGTTTGGGCTCGTGATTTACTTTCCAAGGGATTGCGTAAACAGGTAGGAAACGGAATGAGTATCCACTTCAACAATGATCCATGGATCCCAAAAGAAACCTCTTTAAAGCCAGTTCTTAAGGTGGCATCACAGGATTTTGAGGGTAGGATGGTATCGAACTTTATTACTCCTTCCAAGGCGTGGGATCTAATCAAGTTCAGAGAATATGTATGGGATGAGGATGTGCGGTTAATCTCAACTATTCATATTAGTACGGTATATACTGATGCAGCAATGTCTCCTACTTGTGATGGGGCAGGGTATGGTGCTCTTATTGTTGATAACGAGGATAACCTATGTGGAGCCATGGAGATGGTCGATAACGCAGCACTAAACCCCCTAGTTGTGGAGGAAAGGATCGTCAGAGTCGTCAGAGTGGTAGTCGGTGGTCGTCGGGAGATGGCAATGGCGGTGGTCATTAGAGGATGTTTGGTGGTGGCGGTGGTTGTTAAAGTGTCGTTGGTTGTGGCGGTGGTTGACGAAGTTTTGAGAGCGATGGTCGTTGAAATTATCGCTAGTGGTGAGTGGTAG MMARYAYGTTLLSTPIKANCSFFWRSCVWARDLLSKGLRKQVGNGMSIHFNNDPWIPKETSLKPVLKVASQDFEGRMVSNFITPSKAWDLIKFREYVWDEDVRLISTIHISTVYTDAAMSPTCDGAGYGALIVDNEDNLCGAMEMVDNAALNPLVVEERIVRVVRVVVGGRREMAMAVVIRGCLVVAVVVKVSLVVAVVDEVLRAMVVEIIASGEW Homology
BLAST of Lcy04g000850 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 1.4e-04 Identity = 21/65 (32.31%), Postives = 37/65 (56.92%), Query Frame = 0
BLAST of Lcy04g000850 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.2e-11 Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of Lcy04g000850 vs. ExPASy TrEMBL
Match: A0A803NTN0 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.2e-11 Identity = 43/108 (39.81%), Postives = 56/108 (51.85%), Query Frame = 0
BLAST of Lcy04g000850 vs. ExPASy TrEMBL
Match: A0A6J1BRN0 (uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004787 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.1e-11 Identity = 39/111 (35.14%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of Lcy04g000850 vs. ExPASy TrEMBL
Match: A0A6D2HV94 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS5103 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.8e-11 Identity = 40/104 (38.46%), Postives = 60/104 (57.69%), Query Frame = 0
BLAST of Lcy04g000850 vs. ExPASy TrEMBL
Match: A0A803NF83 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 2.8e-11 Identity = 43/113 (38.05%), Postives = 60/113 (53.10%), Query Frame = 0
BLAST of Lcy04g000850 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia]) HSP 1 Score: 80.1 bits (196), Expect = 2.6e-11 Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of Lcy04g000850 vs. NCBI nr
Match: XP_022131662.1 (uncharacterized protein LOC111004787 [Momordica charantia]) HSP 1 Score: 79.3 bits (194), Expect = 4.4e-11 Identity = 39/111 (35.14%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of Lcy04g000850 vs. NCBI nr
Match: CAA7017868.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 79.0 bits (193), Expect = 5.7e-11 Identity = 40/104 (38.46%), Postives = 60/104 (57.69%), Query Frame = 0
BLAST of Lcy04g000850 vs. NCBI nr
Match: CAA7055450.1 (unnamed protein product [Microthlaspi erraticum]) HSP 1 Score: 77.4 bits (189), Expect = 1.7e-10 Identity = 39/106 (36.79%), Postives = 62/106 (58.49%), Query Frame = 0
BLAST of Lcy04g000850 vs. NCBI nr
Match: XP_018462059.1 (PREDICTED: uncharacterized protein LOC108833114 [Raphanus sativus]) HSP 1 Score: 75.9 bits (185), Expect = 4.9e-10 Identity = 41/113 (36.28%), Postives = 60/113 (53.10%), Query Frame = 0
BLAST of Lcy04g000850 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein ) HSP 1 Score: 48.1 bits (113), Expect = 1.0e-05 Identity = 21/65 (32.31%), Postives = 37/65 (56.92%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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