Lcy03g019490 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCATTCCGGTGGGGCAGACCAACTGGACTCTGTAAATTTCATGGAAGCTTCTCACCTTCTTCCTCACACTTTCTTCCTTCTCTTTCCAATTACCGAACCACCAAATTCAAGACGAAGCAATGATTATTTTATAGAAGACCGATGGAATCAACGCAATCAAACGACATTTGATCACTTCTCTCCGCCTTCTCAGACAAGAAAGCCCTAAATCCGTGCAGAAATTTCAACTCTCGAGGTTTCGCAAGTTTCTCCAATGGCCGGAATGCTTCCAGGTGTAGAGTGTGCTCGAAGAAGACGGTGTCATCAAAACAAAGTATGGTCAGATTCACCGCCCGTCGCCGCTCAGACCTTAACCAGGAGATCCATTCTCTGCTTGTACACAAGCAACCACGAAACGCTCCTCGCTTCAAATCCCTCTCTGGTTCGTAAATCGCGTCTCGCTCTGTCAATAATGATTTCAAAATTTACTCGTTCAATTGAGGATGAAGAACAGAATTGATTCGATTCTATTTGAAAATTTTGCAGCAAAGAAGCCTGTTAGTTGAGGCACAACTACAAGAAGACGATAAACTGGACGGAATTGCGAAAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGATCGCAAAGGAAATCAGAGGATGGAAGGTACTGAAACGACGGCGTTTTCAACACCACCGATGAATTTACATTTCATTAATTAAATCATCGTAAAAATCATCCAAAATTCCTTGTTTCTCATGGTTCAAAAGAATTAAATGTTTGCGATTCGATGTAGAGGGATGATGACGAGAAAATTCAGTTGGACCAAGTTGAATTGGATCGCCGTAGAGCAACAAGATTGTGGTCCGTGCTGGTGATGAAGACGACTTGATTTCAGTTGGTCTGTACTTCTTCTTCTTCTTCTTTTCTTCCAAGGTGCTTGTTTCCATTAGAACTGCCCGTAATTTCCTCCATCGTTAACTTGCGAGGAAAACATTTGTCGTAATATCTGTGCTGATGTATGAGATGTCGTGATACAATCATTCTGGCATGTAAAGACTTTGAATACAGACACCCTTTTGGTTTATTTGAATGATTCTGATCATACTTGTTGTCAGTTCTTTATAAATTTTTGTGCGAAAAGTTGAAGTAGCTGAAACAAAAACCAAACCATTAGAATCGGTTTTTGCAGACGGATTGAAGAACAGTGAGAGGAAATTTGAGAATTTGAATCGAAGGGATGGAATTAAAGTGAATGCATGTAAGAGAGAGTTGTCTTCTAAACTTCT TTCATTCCGGTGGGGCAGACCAACTGGACTCTGTAAATTTCATGGAAGCTTCTCACCTTCTTCCTCACACTTTCTTCCTTCTCTTTCCAATTACCGAACCACCAAATTCAAGACGAAGCAATGATTATTTTATAGAAGACCGATGGAATCAACGCAATCAAACGACATTTGATCACTTCTCTCCGCCTTCTCAGACAAGAAAGCCCTAAATCCGTGCAGAAATTTCAACTCTCGAGGTTTCGCAAGTTTCTCCAATGGCCGGAATGCTTCCAGGTGTAGAGTGTGCTCGAAGAAGACGGTGTCATCAAAACAAAGTATGGTCAGATTCACCGCCCGTCGCCGCTCAGACCTTAACCAGGAGATCCATTCTCTGCTTGTACACAAGCAACCACGAAACGCTCCTCGCTTCAAATCCCTCTCTGCAAAGAAGCCTGTTAGTTGAGGCACAACTACAAGAAGACGATAAACTGGACGGAATTGCGAAAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGATCGCAAAGGAAATCAGAGGATGGAAGAGGGATGATGACGAGAAAATTCAGTTGGACCAAGTTGAATTGGATCGCCGTAGAGCAACAAGATTGTGGTCCGTGCTGGTGATGAAGACGACTTGATTTCAGTTGGTCTGTACTTCTTCTTCTTCTTCTTTTCTTCCAAGGTGCTTGTTTCCATTAGAACTGCCCGTAATTTCCTCCATCGTTAACTTGCGAGGAAAACATTTGTCGTAATATCTGTGCTGATGTATGAGATGTCGTGATACAATCATTCTGGCATGTAAAGACTTTGAATACAGACACCCTTTTGGTTTATTTGAATGATTCTGATCATACTTGTTGTCAGTTCTTTATAAATTTTTGTGCGAAAAGTTGAAGTAGCTGAAACAAAAACCAAACCATTAGAATCGGTTTTTGCAGACGGATTGAAGAACAGTGAGAGGAAATTTGAGAATTTGAATCGAAGGGATGGAATTAAAGTGAATGCATGTAAGAGAGAGTTGTCTTCTAAACTTCT ATGGCCGGAATGCTTCCAGGTGTAGAGTGTGCTCGAAGAAGACGGTGTCATCAAAACAAAGTATGGTCAGATTCACCGCCCGTCGCCGCTCAGACCTTAACCAGGAGATCCATTCTCTGCTTGTACACAAGCAACCACGAAACGCTCCTCGCTTCAAATCCCTCTCTGCAAAGAAGCCTGTTAGTTGAGGCACAACTACAAGAAGACGATAAACTGGACGGAATTGCGAAAGAGGCGAAGAGGAGATTGGACGAGCGATTGAGATCGCAAAGGAAATCAGAGGATGGAAGAGGGATGATGACGAGAAAATTCAGTTGGACCAAGTTGAATTGGATCGCCGTAGAGCAACAAGATTGTGGTCCGTGCTGGTGA MAGMLPGVECARRRRCHQNKVWSDSPPVAAQTLTRRSILCLYTSNHETLLASNPSLQRSLLVEAQLQEDDKLDGIAKEAKRRLDERLRSQRKSEDGRGMMTRKFSWTKLNWIAVEQQDCGPCW Homology
BLAST of Lcy03g019490 vs. ExPASy TrEMBL
Match: A0A6J1E765 (uncharacterized protein LOC111430042 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111430042 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 5.8e-46 Identity = 96/123 (78.05%), Postives = 103/123 (83.74%), Query Frame = 0
BLAST of Lcy03g019490 vs. ExPASy TrEMBL
Match: A0A6J1E1Y4 (uncharacterized protein LOC111430042 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111430042 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 9.8e-46 Identity = 96/123 (78.05%), Postives = 103/123 (83.74%), Query Frame = 0
BLAST of Lcy03g019490 vs. ExPASy TrEMBL
Match: A0A1S3B9W3 (uncharacterized protein LOC103487385 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487385 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 9.8e-46 Identity = 97/125 (77.60%), Postives = 106/125 (84.80%), Query Frame = 0
BLAST of Lcy03g019490 vs. ExPASy TrEMBL
Match: A0A5A7U973 (Putative E3 ubiquitin-protein ligase RHY1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00720 PE=4 SV=1) HSP 1 Score: 188.7 bits (478), Expect = 1.4e-44 Identity = 96/125 (76.80%), Postives = 105/125 (84.00%), Query Frame = 0
BLAST of Lcy03g019490 vs. ExPASy TrEMBL
Match: A0A6J1JME7 (uncharacterized protein LOC111485711 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485711 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 1.9e-44 Identity = 94/123 (76.42%), Postives = 101/123 (82.11%), Query Frame = 0
BLAST of Lcy03g019490 vs. NCBI nr
Match: XP_038876903.1 (uncharacterized protein LOC120069257 [Benincasa hispida]) HSP 1 Score: 211.8 bits (538), Expect = 3.2e-51 Identity = 101/123 (82.11%), Postives = 111/123 (90.24%), Query Frame = 0
BLAST of Lcy03g019490 vs. NCBI nr
Match: XP_023515554.1 (uncharacterized protein LOC111779678 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 196.8 bits (499), Expect = 1.1e-46 Identity = 99/123 (80.49%), Postives = 105/123 (85.37%), Query Frame = 0
BLAST of Lcy03g019490 vs. NCBI nr
Match: XP_022921935.1 (uncharacterized protein LOC111430042 isoform X2 [Cucurbita moschata]) HSP 1 Score: 193.4 bits (490), Expect = 1.2e-45 Identity = 96/123 (78.05%), Postives = 103/123 (83.74%), Query Frame = 0
BLAST of Lcy03g019490 vs. NCBI nr
Match: XP_008443904.1 (PREDICTED: uncharacterized protein LOC103487385 isoform X1 [Cucumis melo]) HSP 1 Score: 192.6 bits (488), Expect = 2.0e-45 Identity = 97/125 (77.60%), Postives = 106/125 (84.80%), Query Frame = 0
BLAST of Lcy03g019490 vs. NCBI nr
Match: XP_022921934.1 (uncharacterized protein LOC111430042 isoform X1 [Cucurbita moschata]) HSP 1 Score: 192.6 bits (488), Expect = 2.0e-45 Identity = 96/123 (78.05%), Postives = 103/123 (83.74%), Query Frame = 0
BLAST of Lcy03g019490 vs. TAIR 10
Match: AT2G15580.2 (RING/U-box superfamily protein ) HSP 1 Score: 79.3 bits (194), Expect = 2.3e-15 Identity = 50/120 (41.67%), Postives = 71/120 (59.17%), Query Frame = 0
BLAST of Lcy03g019490 vs. TAIR 10
Match: AT2G15580.1 (RING/U-box superfamily protein ) HSP 1 Score: 70.1 bits (170), Expect = 1.4e-12 Identity = 46/100 (46.00%), Postives = 60/100 (60.00%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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