Lcy03g008230 (gene) Sponge gourd (P93075) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAGGCAATTCCCTTCCCTCTTTCTGACCACTTTCCCCACCTCAAACCTCCATCAATGGCTTCCTTCTCCAGAGCCCTCTCCCCTTTCTCACTATTCCTTCTAATTCTCGCCATTTCCACTCAAACCCACCTCTCCTTTTCGATAAGGGATACTCCCCTCGAGTCAACAGACATCCACGAACTTCTGCCCCTTTACGGTTTCCCAAAGGGTCTCTTACCCAACAATGTCAAGTCCTACACTCTCTCAGACGACGGCAGTTTCGAAATTGAGCTCGAAAGCGAGTGTTATGTGAAGTTCGATTTGCTAGTCTATTACGATAAGAAAATCAAGGGGAAATTGAGCTATGGGTCTGTGGCGGATGTTTCTGGAATTCAAGCGAAGAAGCTGTTCTTGTGGGTCTCTGTTACTGGGATCAAGGCCAATCAGGGCTCTGAAACGATCGATTTTTATGTTGGGATTTTGTCTGAGACTTTGCCGGCCCAACAGTTCCAGAAGATTCCTGCATGTAGAAGGAAGGCTTGCCTAGAAGAAAGAACAGAGGCCATGTGAGGTAGTTTTGATCTTTCTTGGATTTCATCTTCTTGATTTTCATTTCTGTTTTATAAATGTTTGTGGATCATGGCTCTGGAATTTGAAGTGGTGACAGTCAGTGGCATGTTTGCTGTGATTTGGGTTTTTGTTGACTGAATTAATAGTTATATGGTCTATTTATGTAGTGAAAATGTGGATGGAAAAGAACATTTTATGTTTGGATAAGGGAACAATTTCATTGATAATGTGAAACTATACAAATAGAGGAGAAAATCCCATCCAAAGAAGTTACCAAAAGCTTCTCCTATTAGTTGAGAGAGCTAAAGCTTTAGTTACTGGAAGGGAAAAATTTTAGCAACAAGAAATGGCCAAATAAGATAAGAAATCAGTGAGGGCTTCTGTTGTTTTGGATGGAAAAGAAAATGTGAACTCATCCAAGTGAGATTTTGTTTATTGTTTCTGAAATGATTTGGTAATCTGTAATTTCTTTCAACTCTTTCCAAAAGTTCCAATTAGATCCACTGGGATTCCAACTCTTTTCATAGTGAACTATTGGATCTGATGGAATTTTGAAATGAGTTGAGAGAGGATCTGAATTTCGTTGTTAAACTCACTTCATGGTCAGAGATCACAGGAGGCACTTCTAGTTAGAAAGCTATAACGATTTTGGTTTTTGTTTTCTGTTTTTAGAAGTTAAACTTGTTTTACTGACCATTATTTGTTTCATTTTTGACATTGTGAAGACATTTTTGAAAAACAAATTGTTGGTAAGCAAACTTAATTTCTAAAAACAGAAAAATCAAATTAGAACAACACGGGCTTTGGATCTGAAGTTAAGAGATTTGGCTACAGAGTAGATGGGACTTTGCTGTGATCAGATTGCACTTTAAGACATATTTTGAATAAATATCAAGATAAAATTAACCACATAGACAATTAGCTTTCTTATCTCTGTTCTTTCTTTCTCTCTCTCTCTCAAAGTATCTTGTTTTGAGAAAATTCAGCAGTCAAAGTAGCTAAGTGCCTGTTTAGAATGACTTAATTCTAAGTGCTTAAAAACTTCTATTTTCCACATGAAAGCACTTTTATGAACACTTAGAAAGTCATAGCAAACGGACCCTAAGAGAGCTTCTTTTATAGAATTATGGGATATCCATCTCGTCTTCAGGATCGTATATGCTCTCTAAAGATTTCGACTACTTGTTTATCAGCTACCATTCCATCCCTTCACTTCTGGCTACTAGGGAGAAATGTTATTGTTCTGTCATCTCTTTGGCCCCTCCTCGTGCTCTGTAATGCTTCCTGATTAACAAAAACTCCCTGAGTTAAAAATGAAAGAGAAAAGTTATATTTGGAAGATTATCACTATGGACATATACCTTAACGTTTTAATGCTTAGTCTCTATTTGTAGTTCAATTCCTCTAAAATGGTTTAGAACTTCATTTAGCCCCTAGTTACCTAACATCAGACTTGTTTCATCGGTAGATACTAATGGTCGATAAGTTTCGAAGCCACATAAATGACGGTGAAAAATTAATATCAAAAGACTAGTTAAAGAACTAAACAAAATATTTGAAAGCCAAGAGATTAAGATAGAAGATGATAGAATATTTTAAAGCTGGGAGATCAAAATGATGAAACTCTGAGATTAAATTAGGAATTAAGCCTTGTGAAATATAAGGATATATTCCTTCTATTTCTGGGTCCCTCATGATTGGAAAGTAGTTGTGTTTTGTTTCTGTGATTGCTTAGCAACATAGCATGAAGTTCTTGTCTGTTTATGATTATTTATTATCTTGAGATCTCTTCTAGATATATATCATTGTATCTTGTCTGTTGGTCATGTCTTTTGATTAATCTCTCTGTCTCTCTCTTGCAGGTGGGAATCATAGATTTCCAAGCATCTATCCTTTTCATTTGGAGTGAGAAGCATGTTACATTTGCAGGTGGAATCATGTCTCTTTGTTTATATGTCATAAACCTACAGTGTCCATTGTAAATCTTTTTACTCTATGTTGTTTCTATATCTATGGTAAAAATATTCCGCTTGTTTACTAATGTTTATTATATATATAGTATCTATATCTTTCTAGGTTAGTTTAGTCTAATTGGTCTTTGAATCTTGAAACCTAATTGGTCTTGACACTTTCAATTTTGTGTTTAATAGGTTCTGAG CAGGCAATTCCCTTCCCTCTTTCTGACCACTTTCCCCACCTCAAACCTCCATCAATGGCTTCCTTCTCCAGAGCCCTCTCCCCTTTCTCACTATTCCTTCTAATTCTCGCCATTTCCACTCAAACCCACCTCTCCTTTTCGATAAGGGATACTCCCCTCGAGTCAACAGACATCCACGAACTTCTGCCCCTTTACGGTTTCCCAAAGGGTCTCTTACCCAACAATGTCAAGTCCTACACTCTCTCAGACGACGGCAGTTTCGAAATTGAGCTCGAAAGCGAGTGTTATGTGAAGTTCGATTTGCTAGTCTATTACGATAAGAAAATCAAGGGGAAATTGAGCTATGGGTCTGTGGCGGATGTTTCTGGAATTCAAGCGAAGAAGCTGTTCTTGTGGGTCTCTGTTACTGGGATCAAGGCCAATCAGGGCTCTGAAACGATCGATTTTTATGTTGGGATTTTGTCTGAGACTTTGCCGGCCCAACAGTTCCAGAAGATTCCTGCATGTAGAAGGAAGGCTTGCCTAGAAGAAAGAACAGAGGCCATGTGAGGTGGGAATCATAGATTTCCAAGCATCTATCCTTTTCATTTGGAGTGAGAAGCATGTTACATTTGCAGGTGGAATCATGTCTCTTTGTTTATATGTCATAAACCTACAGTGTCCATTGTAAATCTTTTTACTCTATGTTGTTTCTATATCTATGGTAAAAATATTCCGCTTGTTTACTAATGTTTATTATATATATAGTATCTATATCTTTCTAGGTTAGTTTAGTCTAATTGGTCTTTGAATCTTGAAACCTAATTGGTCTTGACACTTTCAATTTTGTGTTTAATAGGTTCTGAG ATGGCTTCCTTCTCCAGAGCCCTCTCCCCTTTCTCACTATTCCTTCTAATTCTCGCCATTTCCACTCAAACCCACCTCTCCTTTTCGATAAGGGATACTCCCCTCGAGTCAACAGACATCCACGAACTTCTGCCCCTTTACGGTTTCCCAAAGGGTCTCTTACCCAACAATGTCAAGTCCTACACTCTCTCAGACGACGGCAGTTTCGAAATTGAGCTCGAAAGCGAGTGTTATGTGAAGTTCGATTTGCTAGTCTATTACGATAAGAAAATCAAGGGGAAATTGAGCTATGGGTCTGTGGCGGATGTTTCTGGAATTCAAGCGAAGAAGCTGTTCTTGTGGGTCTCTGTTACTGGGATCAAGGCCAATCAGGGCTCTGAAACGATCGATTTTTATGTTGGGATTTTGTCTGAGACTTTGCCGGCCCAACAGTTCCAGAAGATTCCTGCATGTAGAAGGAAGGCTTGCCTAGAAGAAAGAACAGAGGCCATGTGA MASFSRALSPFSLFLLILAISTQTHLSFSIRDTPLESTDIHELLPLYGFPKGLLPNNVKSYTLSDDGSFEIELESECYVKFDLLVYYDKKIKGKLSYGSVADVSGIQAKKLFLWVSVTGIKANQGSETIDFYVGILSETLPAQQFQKIPACRRKACLEERTEAM Homology
BLAST of Lcy03g008230 vs. ExPASy TrEMBL
Match: A0A6J1KX25 (uncharacterized protein LOC111498989 OS=Cucurbita maxima OX=3661 GN=LOC111498989 PE=4 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 1.0e-69 Identity = 136/158 (86.08%), Postives = 145/158 (91.77%), Query Frame = 0
BLAST of Lcy03g008230 vs. ExPASy TrEMBL
Match: A0A6J1F5P9 (uncharacterized protein LOC111441073 OS=Cucurbita moschata OX=3662 GN=LOC111441073 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 3.8e-69 Identity = 136/158 (86.08%), Postives = 143/158 (90.51%), Query Frame = 0
BLAST of Lcy03g008230 vs. ExPASy TrEMBL
Match: A0A6J1H9I3 (uncharacterized protein LOC111461358 OS=Cucurbita moschata OX=3662 GN=LOC111461358 PE=4 SV=1) HSP 1 Score: 249.2 bits (635), Expect = 1.2e-62 Identity = 127/164 (77.44%), Postives = 138/164 (84.15%), Query Frame = 0
BLAST of Lcy03g008230 vs. ExPASy TrEMBL
Match: A0A6J1DIG2 (uncharacterized protein LOC111020803 OS=Momordica charantia OX=3673 GN=LOC111020803 PE=4 SV=1) HSP 1 Score: 248.8 bits (634), Expect = 1.5e-62 Identity = 132/174 (75.86%), Postives = 140/174 (80.46%), Query Frame = 0
BLAST of Lcy03g008230 vs. ExPASy TrEMBL
Match: A0A5A7UJ73 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold319G00410 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 2.3e-58 Identity = 117/164 (71.34%), Postives = 136/164 (82.93%), Query Frame = 0
BLAST of Lcy03g008230 vs. NCBI nr
Match: XP_023006181.1 (uncharacterized protein LOC111498989 [Cucurbita maxima]) HSP 1 Score: 272.7 bits (696), Expect = 2.1e-69 Identity = 136/158 (86.08%), Postives = 145/158 (91.77%), Query Frame = 0
BLAST of Lcy03g008230 vs. NCBI nr
Match: XP_022933750.1 (uncharacterized protein LOC111441073 [Cucurbita moschata]) HSP 1 Score: 270.8 bits (691), Expect = 7.8e-69 Identity = 136/158 (86.08%), Postives = 143/158 (90.51%), Query Frame = 0
BLAST of Lcy03g008230 vs. NCBI nr
Match: KAG7022156.1 (hypothetical protein SDJN02_15885, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 270.4 bits (690), Expect = 1.0e-68 Identity = 136/158 (86.08%), Postives = 143/158 (90.51%), Query Frame = 0
BLAST of Lcy03g008230 vs. NCBI nr
Match: XP_023531629.1 (uncharacterized protein LOC111793813 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 270.0 bits (689), Expect = 1.3e-68 Identity = 136/158 (86.08%), Postives = 144/158 (91.14%), Query Frame = 0
BLAST of Lcy03g008230 vs. NCBI nr
Match: KAG6588240.1 (hypothetical protein SDJN03_16805, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 267.7 bits (683), Expect = 6.6e-68 Identity = 134/158 (84.81%), Postives = 142/158 (89.87%), Query Frame = 0
BLAST of Lcy03g008230 vs. TAIR 10
Match: AT1G55265.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 159.8 bits (403), Expect = 1.8e-39 Identity = 86/172 (50.00%), Postives = 115/172 (66.86%), Query Frame = 0
BLAST of Lcy03g008230 vs. TAIR 10
Match: AT5G19860.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 122.9 bits (307), Expect = 2.5e-28 Identity = 61/147 (41.50%), Postives = 95/147 (64.63%), Query Frame = 0
BLAST of Lcy03g008230 vs. TAIR 10
Match: AT1G61667.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 94.7 bits (234), Expect = 7.2e-20 Identity = 47/132 (35.61%), Postives = 74/132 (56.06%), Query Frame = 0
BLAST of Lcy03g008230 vs. TAIR 10
Match: AT5G54530.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 94.0 bits (232), Expect = 1.2e-19 Identity = 51/147 (34.69%), Postives = 80/147 (54.42%), Query Frame = 0
BLAST of Lcy03g008230 vs. TAIR 10
Match: AT3G07460.1 (Protein of unknown function, DUF538 ) HSP 1 Score: 81.6 bits (200), Expect = 6.3e-16 Identity = 42/125 (33.60%), Postives = 68/125 (54.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
Relationships
The following mRNA feature(s) are a part of this gene:
|