Lcy03g007990 (gene) Sponge gourd (P93075) v1

Overview
NameLcy03g007990
Typegene
OrganismLuffa cylindrica cv. P93075 (Sponge gourd (P93075) v1)
DescriptionReverse transcriptase domain-containing protein
LocationChr03: 39464040 .. 39465446 (-)
RNA-Seq ExpressionLcy03g007990
SyntenyLcy03g007990
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGAAAGTCAGTGTATATGGATCTAACTGGATTCCAGATGATACCTGCCTTGAGGTACGGTCCTCGGTTACTTTGGATCTGGATACTCGAGTGGCTGATCTTCTTACTGTCTCGGGCTAGTGGAATGAGGAACTCCTTCAGCATCACTTTAGTCCTTGCGAGGTACGCTCTATCCTTACTATCCCCTTGCGGCATATATCGGCTGAGGATAAAGTCATATGGCATTCTGAGAAGTGTGGGATCTATACGATTAAGAGTGGGTACCGGCTTGGCCAGGTGACTTTGCTTGCCCAAACCCCATTTTCGTCTTCGTGTGAGACGTTGTCCAGTTGGTGGAAGGGGTGTTGGAAAATGAGGATCCCAAACAAAATTAAGATTTTCTTTTGGAGGCTTTGCTTGGAGCGACTTCCTACTGTTGACAACTTGAGTGTCAGGGGCATTGATGTTTTGAATGTGTGTGTGCATTGTGGTTGGCATGGGGAGTCATGCATGCATTTGTTTTGGCAGTGCAAATTTTTTCGTGAAGTATTGATGGGATCTGAGTGGGAGGTTCTGCTGCAGAGTGTCCAGGCGAACTCTATGCTTAATCTGCTTAGGGGTGTGAAGGACAAGGTCGATTGGGCTAAGTTTGAAGAGCTTGTTGTGGTGTTGTGGGTTGTGTGGTGTTGTCGAAACCAACAGAAGTTTAGAGGGTGGGTTCCTTCAGTAGGGCTTGTGGATTGGACGGTGAATTATCTTGCTGTTTTTCGAGGGGCCTCTCGGACCTATTGTGAGGGGATTAGAGGAGTGCCTCGGAGTGCAGTAAAATGGTTCCCGCTGGAGGAGGGATGGTATAAGGTGAACGTGGATGCTGCATATTGTGAGGATCTATCTCAGGCGGGTGCTGGAGTTGTTGTTCGGGATGAGGTAGGGCGAGTCATGCTGTCAGCTACTGTTAGTCATGATCATGTGGGGAATTCAGATTTGGCAGAGGGTCTGACGGTGGTGGACGGGATGAGGCTTGTGGTGGAGATGGATTTAGTTCTGGTAATCCTTGAGATTGACTCTATGCGGGTTTATTCGTTGCTGCAAGAGCCTGCGATGGTGGATCTGTCTGAGTTAGATGTGTTGGTTTCTGAGGCTCGAAAGGAGGTGCCTGGGCACATTTAGCTCGGGTTCAGCTTTACAAGAAGGGAAGGAAACCGTGTCGCCCATGAGTTAGCCCGCTTTGCTTTGAAAGAGAGTGATTGTGAGTATTGGATGGAATCAGTTCCTGCGTGTGCCTATCCTCTGGTTGAGGAAGATATTTTATCCCTGTAATTGCTTTTCTTTCCTAAGTGCTATTGTCAGGTAGGTGGCGGTCGAGCTAGTGAAGATCGAGAATGGAAAGCGAACCAGAAAACCATCTAAACTGGAAGGGTGA

mRNA sequence

ATGGGGAGAAAGTCAGTGTATATGGATCTAACTGGATTCCAGATGATACCTGCCTTGAGGTACGGTCCTCGGTTACTTTGGATCTGGATACTCGAGTGGCTGATCTTCTTACTGTCTCGGGCTAGTGGAATGAGGAACTCCTTCAGCATCACTTTAGTCCTTGCGAGGTACGCTCTATCCTTACTATCCCCTTGCGGCATATATCGGCTGAGGATAAAGTCATATGGCATTCTGAGAAGTGTGGGATCTATACGATTAAGAGTGGGTACCGGCTTGGCCAGGGGCATTGATGTTTTGAATGTGTGTGTGCATTGTGGTTGGCATGGGGAGTCATGCATGCATTTGTTTTGGCAGTGCAAATTTTTTCGTGAAGTATTGATGGGATCTGAGTGGGAGGTTCTGCTGCAGAGTGTCCAGGCGAACTCTATGCTTAATCTGCTTAGGGGTGTGAAGGACAAGGTCGATTGGGCTAAGTTTGAAGAGCTTGTTGTGGTGTTGTGGGTTGTGTGGTGTTGTCGAAACCAACAGAAGTTTAGAGGGTGGGTTCCTTCAGTAGGGCTTGTGGATTGGACGGTGAATTATCTTGCTGTTTTTCGAGGGGCCTCTCGGACCTATTGTGAGGGGATTAGAGGAGTGCCTCGGAGTGCAGTAAAATGGTTCCCGCTGGAGGAGGGATGGTATAAGGTGAACGTGGATGCTGCATATTGTGAGGATCTATCTCAGGCGGGTGCTGGAGTTGTTGTTCGGGATGAGGTAGGGCGAGTCATGCTGTCAGCTACTGTTAGTCATGATCATGTGGGGAATTCAGATTTGGCAGAGGGTCTGACGGTGGTGGACGGGATGAGGCTTGTGGTGGAGATGGATTTAGTTCTGGTAATCCTTGAGATTGACTCTATGCGGGTTTATTCGTTGCTGCAAGAGCCTGCGATGGTGGATCTGTCTGAGTTAGATGTGTTGGTTTCTGAGGCTCGAAAGGAGGTGGCGGTCGAGCTAGTGAAGATCGAGAATGGAAAGCGAACCAGAAAACCATCTAAACTGGAAGGGTGA

Coding sequence (CDS)

ATGGGGAGAAAGTCAGTGTATATGGATCTAACTGGATTCCAGATGATACCTGCCTTGAGGTACGGTCCTCGGTTACTTTGGATCTGGATACTCGAGTGGCTGATCTTCTTACTGTCTCGGGCTAGTGGAATGAGGAACTCCTTCAGCATCACTTTAGTCCTTGCGAGGTACGCTCTATCCTTACTATCCCCTTGCGGCATATATCGGCTGAGGATAAAGTCATATGGCATTCTGAGAAGTGTGGGATCTATACGATTAAGAGTGGGTACCGGCTTGGCCAGGGGCATTGATGTTTTGAATGTGTGTGTGCATTGTGGTTGGCATGGGGAGTCATGCATGCATTTGTTTTGGCAGTGCAAATTTTTTCGTGAAGTATTGATGGGATCTGAGTGGGAGGTTCTGCTGCAGAGTGTCCAGGCGAACTCTATGCTTAATCTGCTTAGGGGTGTGAAGGACAAGGTCGATTGGGCTAAGTTTGAAGAGCTTGTTGTGGTGTTGTGGGTTGTGTGGTGTTGTCGAAACCAACAGAAGTTTAGAGGGTGGGTTCCTTCAGTAGGGCTTGTGGATTGGACGGTGAATTATCTTGCTGTTTTTCGAGGGGCCTCTCGGACCTATTGTGAGGGGATTAGAGGAGTGCCTCGGAGTGCAGTAAAATGGTTCCCGCTGGAGGAGGGATGGTATAAGGTGAACGTGGATGCTGCATATTGTGAGGATCTATCTCAGGCGGGTGCTGGAGTTGTTGTTCGGGATGAGGTAGGGCGAGTCATGCTGTCAGCTACTGTTAGTCATGATCATGTGGGGAATTCAGATTTGGCAGAGGGTCTGACGGTGGTGGACGGGATGAGGCTTGTGGTGGAGATGGATTTAGTTCTGGTAATCCTTGAGATTGACTCTATGCGGGTTTATTCGTTGCTGCAAGAGCCTGCGATGGTGGATCTGTCTGAGTTAGATGTGTTGGTTTCTGAGGCTCGAAAGGAGGTGGCGGTCGAGCTAGTGAAGATCGAGAATGGAAAGCGAACCAGAAAACCATCTAAACTGGAAGGGTGA

Protein sequence

MGRKSVYMDLTGFQMIPALRYGPRLLWIWILEWLIFLLSRASGMRNSFSITLVLARYALSLLSPCGIYRLRIKSYGILRSVGSIRLRVGTGLARGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSVGLVDWTVNYLAVFRGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMDLVLVILEIDSMRVYSLLQEPAMVDLSELDVLVSEARKEVAVELVKIENGKRTRKPSKLEG
Homology
BLAST of Lcy03g007990 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 9.3e-25
Identity = 78/246 (31.71%), Postives = 124/246 (50.41%), Query Frame = 0

Query: 85   RLRVGTGLA-RGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSM 144
            RL  G  L+ RG+++ N C  CG +GE  +HLFW CKF   + + S++  L       S 
Sbjct: 859  RLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKL-------SP 918

Query: 145  LNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSV-----GLVDWTVNYLAVF 204
              +LR   + +  A FEEL VV+W +W  RN + F     +V      LV+W   Y   F
Sbjct: 919  FLILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEF 978

Query: 205  RGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLS 264
            R A      G R    + + W P +EG YK+N DA++      AG G+++ ++ G+VM +
Sbjct: 979  REAKSNPITG-RVTNTAEILWQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAA 1038

Query: 265  ATVSHDHVGNSDLAEGLTVVDGMRLVVEMDLVLVILEIDSMRVYSLLQEPAMVDLSELDV 324
            AT   +++ + D+AE +  V+G++L  E+ +                  PA+ DLSE   
Sbjct: 1039 ATKYLENIQSVDMAEAIAAVEGLQLASEIGM-----------------HPALEDLSETGE 1079

BLAST of Lcy03g007990 vs. ExPASy TrEMBL
Match: A0A6J1CDQ4 (uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010533 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.3e-18
Identity = 70/213 (32.86%), Postives = 109/213 (51.17%), Query Frame = 0

Query: 143 MLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKF-RGWVPSVGLVDWTVNYLAVFRGA 202
           M+N+LR  +D ++W  FEELVV LW +W  RN   F +  V    L  W   Y+A F+  
Sbjct: 1   MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKAT 60

Query: 203 SRTYCEGIRGVPRSAVK------------WFPLEEGWYKVNVDAAYCEDLSQAGAGV-VV 262
           +  +    + V +S  +            W P EEG +K+  DA++      AG GV ++
Sbjct: 61  NTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIII 120

Query: 263 RDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMDLVLVILEIDSMRVYSLLQEP 322
           RD  G+V+ SAT   +HV + D AE L  V+G+R+ +E  +  ++LE DS+R+Y+L    
Sbjct: 121 RDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARD 180

Query: 323 AMVDLSELDVLVSEARKEVAVEL-VKIENGKRT 341
               LS+   ++   +  +A  L V     KRT
Sbjct: 181 -KEGLSKTGSIIEYVKTHLATRLQVSYSFTKRT 212

BLAST of Lcy03g007990 vs. ExPASy TrEMBL
Match: A0A6J1DBJ7 (uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018973 PE=4 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 2.9e-18
Identity = 75/213 (35.21%), Postives = 103/213 (48.36%), Query Frame = 0

Query: 113 MHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCC 172
           M   WQC  F   L       LL     + M + +R   D V W     +VV+LW +W  
Sbjct: 1   MRSIWQCSKFSHFLH------LLWVPVGSDMGHFMRVWTDLVSWQHIGAIVVLLWAIWNA 60

Query: 173 RNQ--QKFRGWVPSVGLVDWTVNYLAVFRGASRTYCEG--IRGVPRSAVKWFPLEEGWYK 232
           RNQ  Q F        LV W+ NYL V++ A R+      +   PR A+ W P      K
Sbjct: 61  RNQTPQHFSLGGSLSDLVSWSENYLQVYQAAQRSSXSALVVCRPPRVAI-WRPPAAPLLK 120

Query: 233 VNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMD 292
           VNVDAA+ ++   AG GV++RD  G V L+A        + D  EG  V +G+ L VE  
Sbjct: 121 VNVDAAFRKESFVAGVGVIIRDSTGLVYLTAIRLLARASDVDWVEGFAVYEGILLAVEAG 180

Query: 293 LVLVILEIDSMRVYSLLQEPAMVDLSELDVLVS 322
            +   +E DS+R+++LL     VD SE+ VL S
Sbjct: 181 FIRFQIETDSLRIFNLLTTDC-VDDSEVGVLCS 205

BLAST of Lcy03g007990 vs. ExPASy TrEMBL
Match: A0A6J1C467 (uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007775 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.6e-16
Identity = 68/184 (36.96%), Postives = 97/184 (52.72%), Query Frame = 0

Query: 152 DKVDWAKFEELVVVLWVVWCCRNQQKF---RGWVPSVGLVDWTVNYLAVFR----GASRT 211
           D++ W   EEL V LW +W  RNQ  F    G++  V +VDW  +YL V++    G S  
Sbjct: 2   DRIKWTGLEELSVFLWAIWNARNQSMFTNGHGFL-LVNMVDWVADYLQVYQSAQEGPSLP 61

Query: 212 YCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHD 271
                RG   SA  W P    ++KVNVDAA+ +    AG  +++RD    V+LSA     
Sbjct: 62  LLLDGRGGRVSA--WCPPLAPFFKVNVDAAFKKGNFSAGLDILIRDSTVNVLLSAMCFIT 121

Query: 272 HVGNSDLAEGLTVVDGMRLVVEMDLVLVILEIDSMRVYSLLQEPAMVDLSELDVLVSEAR 329
           HV +  LAE L   +G+ L +E  L+   +E DS +V++LL+     D SE+ VL S  R
Sbjct: 122 HVSDVTLAECLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDC-EDESEIGVLASSIR 181

BLAST of Lcy03g007990 vs. ExPASy TrEMBL
Match: A0A2N9G1T0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21192 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 8.7e-15
Identity = 63/217 (29.03%), Postives = 100/217 (46.08%), Query Frame = 0

Query: 92  LARGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVK 151
           L R I     C  C +  E+  HLF QC + R+VL G +  V++QS   + M++ L  + 
Sbjct: 443 LKRNISSPLECPICDYESETSKHLFGQCIYVRKVLEGKDLAVIIQSELDSEMVDRLWSIW 502

Query: 152 DKVDWAKFEELVVVLWVVWCCRNQQKFRGWV--PSVGLVDWTVNYLAVFRGASRTYCEGI 211
                   + +  V W +W   N   FR  V  P+    D  + Y+  F  A+       
Sbjct: 503 KFKGEVALKLVATVSWCMWSVWNSSVFRDIVKLPAKIFPD-AMKYIQEFNDANAMSVSYF 562

Query: 212 RGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNS 271
               R  + W PL EGWYKVN+D A   +L + G GVV+R++ G  + + +   D+  ++
Sbjct: 563 PPSVRDRIVWTPLLEGWYKVNMDGAVFANLKKVGVGVVIRNKRGEFLGTLSELLDYGLDA 622

Query: 272 DLAEGLTVVDGMRLVVEMDLVLVILEIDSMRVYSLLQ 307
             AE L  +  +    E+    +I E D ++V   LQ
Sbjct: 623 TDAEALAALRAIEFAAEVCPFSMIFEGDCLQVIKALQ 658

BLAST of Lcy03g007990 vs. NCBI nr
Match: XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])

HSP 1 Score: 124.4 bits (311), Expect = 1.9e-24
Identity = 78/246 (31.71%), Postives = 124/246 (50.41%), Query Frame = 0

Query: 85   RLRVGTGLA-RGIDVLNVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSM 144
            RL  G  L+ RG+++ N C  CG +GE  +HLFW CKF   + + S++  L       S 
Sbjct: 859  RLPTGCNLSKRGVEITNCCYFCGRNGEDSIHLFWICKFAEALWINSKFGKL-------SP 918

Query: 145  LNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKFRGWVPSV-----GLVDWTVNYLAVF 204
              +LR   + +  A FEEL VV+W +W  RN + F     +V      LV+W   Y   F
Sbjct: 919  FLILRESHESLSKADFEELCVVIWGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEF 978

Query: 205  RGASRTYCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLS 264
            R A      G R    + + W P +EG YK+N DA++      AG G+++ ++ G+VM +
Sbjct: 979  REAKSNPITG-RVTNTAEILWQPPDEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAA 1038

Query: 265  ATVSHDHVGNSDLAEGLTVVDGMRLVVEMDLVLVILEIDSMRVYSLLQEPAMVDLSELDV 324
            AT   +++ + D+AE +  V+G++L  E+ +                  PA+ DLSE   
Sbjct: 1039 ATKYLENIQSVDMAEAIAAVEGLQLASEIGM-----------------HPALEDLSETGE 1079

BLAST of Lcy03g007990 vs. NCBI nr
Match: XP_022139684.1 (uncharacterized protein LOC111010533 [Momordica charantia])

HSP 1 Score: 104.0 bits (258), Expect = 2.7e-18
Identity = 70/213 (32.86%), Postives = 109/213 (51.17%), Query Frame = 0

Query: 143 MLNLLRGVKDKVDWAKFEELVVVLWVVWCCRNQQKF-RGWVPSVGLVDWTVNYLAVFRGA 202
           M+N+LR  +D ++W  FEELVV LW +W  RN   F +  V    L  W   Y+A F+  
Sbjct: 1   MINILRDWRDMLNWKDFEELVVFLWSLWNRRNAFVFNKRRVEDDDLAGWVSTYIATFKAT 60

Query: 203 SRTYCEGIRGVPRSAVK------------WFPLEEGWYKVNVDAAYCEDLSQAGAGV-VV 262
           +  +    + V +S  +            W P EEG +K+  DA++      AG GV ++
Sbjct: 61  NTNHATANQDVSQSFQQSSQIHQAQNHTIWCPAEEGVFKLKTDASFSSIDFNAGLGVIII 120

Query: 263 RDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMDLVLVILEIDSMRVYSLLQEP 322
           RD  G+V+ SAT   +HV + D AE L  V+G+R+ +E  +  ++LE DS+R+Y+L    
Sbjct: 121 RDHRGQVLASATKYLEHVASVDDAEALAAVEGLRVAMETGISPILLETDSLRIYNLFARD 180

Query: 323 AMVDLSELDVLVSEARKEVAVEL-VKIENGKRT 341
               LS+   ++   +  +A  L V     KRT
Sbjct: 181 -KEGLSKTGSIIEYVKTHLATRLQVSYSFTKRT 212

BLAST of Lcy03g007990 vs. NCBI nr
Match: XP_022150944.1 (uncharacterized protein LOC111018973 [Momordica charantia])

HSP 1 Score: 102.8 bits (255), Expect = 6.0e-18
Identity = 75/213 (35.21%), Postives = 103/213 (48.36%), Query Frame = 0

Query: 113 MHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKFEELVVVLWVVWCC 172
           M   WQC  F   L       LL     + M + +R   D V W     +VV+LW +W  
Sbjct: 1   MRSIWQCSKFSHFLH------LLWVPVGSDMGHFMRVWTDLVSWQHIGAIVVLLWAIWNA 60

Query: 173 RNQ--QKFRGWVPSVGLVDWTVNYLAVFRGASRTYCEG--IRGVPRSAVKWFPLEEGWYK 232
           RNQ  Q F        LV W+ NYL V++ A R+      +   PR A+ W P      K
Sbjct: 61  RNQTPQHFSLGGSLSDLVSWSENYLQVYQAAQRSSXSALVVCRPPRVAI-WRPPAAPLLK 120

Query: 233 VNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAEGLTVVDGMRLVVEMD 292
           VNVDAA+ ++   AG GV++RD  G V L+A        + D  EG  V +G+ L VE  
Sbjct: 121 VNVDAAFRKESFVAGVGVIIRDSTGLVYLTAIRLLARASDVDWVEGFAVYEGILLAVEAG 180

Query: 293 LVLVILEIDSMRVYSLLQEPAMVDLSELDVLVS 322
            +   +E DS+R+++LL     VD SE+ VL S
Sbjct: 181 FIRFQIETDSLRIFNLLTTDC-VDDSEVGVLCS 205

BLAST of Lcy03g007990 vs. NCBI nr
Match: XP_022135942.1 (uncharacterized protein LOC111007775 [Momordica charantia])

HSP 1 Score: 95.5 bits (236), Expect = 9.6e-16
Identity = 68/184 (36.96%), Postives = 97/184 (52.72%), Query Frame = 0

Query: 152 DKVDWAKFEELVVVLWVVWCCRNQQKF---RGWVPSVGLVDWTVNYLAVFR----GASRT 211
           D++ W   EEL V LW +W  RNQ  F    G++  V +VDW  +YL V++    G S  
Sbjct: 2   DRIKWTGLEELSVFLWAIWNARNQSMFTNGHGFL-LVNMVDWVADYLQVYQSAQEGPSLP 61

Query: 212 YCEGIRGVPRSAVKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHD 271
                RG   SA  W P    ++KVNVDAA+ +    AG  +++RD    V+LSA     
Sbjct: 62  LLLDGRGGRVSA--WCPPLAPFFKVNVDAAFKKGNFSAGLDILIRDSTVNVLLSAMCFIT 121

Query: 272 HVGNSDLAEGLTVVDGMRLVVEMDLVLVILEIDSMRVYSLLQEPAMVDLSELDVLVSEAR 329
           HV +  LAE L   +G+ L +E  L+   +E DS +V++LL+     D SE+ VL S  R
Sbjct: 122 HVSDVTLAECLAAQEGVCLAIEAGLIPFQIETDSSQVFNLLRTDC-EDESEIGVLASSIR 181

BLAST of Lcy03g007990 vs. NCBI nr
Match: KAG2689722.1 (hypothetical protein I3760_09G152300 [Carya illinoinensis])

HSP 1 Score: 90.5 bits (223), Expect = 3.1e-14
Identity = 57/177 (32.20%), Postives = 85/177 (48.02%), Query Frame = 0

Query: 100 NVCVHCGWHGESCMHLFWQCKFFREVLMGSEWEVLLQSVQANSMLNLLRGVKDKVDWAKF 159
           ++C  C  H ES MH  WQC    +V   S   V   S+   S+++L+  +   +   + 
Sbjct: 4   DLCPVCKVHKESVMHALWQCVASSDVWTESSARVQKWSIMEESLMDLIEKMAQNLTTEEM 63

Query: 160 EELVVVLWVVWCCRNQQKF-RGWVPSVGLVDWTVNYLAVFRGAS--RTYCEGIRGVPRSA 219
           EE+ VV+W +W  RNQ  F   ++P   L++     L  F+ A     +   IRG+    
Sbjct: 64  EEVAVVMWRIWLRRNQLVFENSFMPPKQLINIAREQLREFQMAQVVAEHPNPIRGL-MGQ 123

Query: 220 VKWFPLEEGWYKVNVDAAYCEDLSQAGAGVVVRDEVGRVMLSATVSHDHVGNSDLAE 274
           V W     G  KVN DAA  +   +AG G+V+RDE G V+ +      HV N  +AE
Sbjct: 124 VGWVKPTAGSVKVNWDAALDQKKGKAGFGIVIRDEKGEVLTACCDQRPHVQNPAIAE 179

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DAR49.3e-2531.71uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1CDQ41.3e-1832.86uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010... [more]
A0A6J1DBJ72.9e-1835.21uncharacterized protein LOC111018973 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
A0A6J1C4674.6e-1636.96uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007... [more]
A0A2N9G1T08.7e-1529.03Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21192 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
XP_022150918.11.9e-2431.71uncharacterized protein LOC111018954 [Momordica charantia][more]
XP_022139684.12.7e-1832.86uncharacterized protein LOC111010533 [Momordica charantia][more]
XP_022150944.16.0e-1835.21uncharacterized protein LOC111018973 [Momordica charantia][more]
XP_022135942.19.6e-1636.96uncharacterized protein LOC111007775 [Momordica charantia][more]
KAG2689722.13.1e-1432.20hypothetical protein I3760_09G152300 [Carya illinoinensis][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (P93075) v1
Date Performed: 2021-12-06
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 230..325
e-value: 8.3E-12
score: 45.0
NoneNo IPR availablePANTHERPTHR47074BNAC02G40300D PROTEINcoord: 217..326
NoneNo IPR availablePANTHERPTHR47074:SF25SUBFAMILY NOT NAMEDcoord: 217..326

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lcy03g007990.1Lcy03g007990.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity