Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGTTACAACCTGACGCTAGAGTTAGGGATTTGTTCACCGCATCAGGGCAATGGAATGAGGTTCTTATCCGACAACACTTTAGCCAGCAGGAGGTAAGATATATTCTCTCCATTCCTCTACGTCGTTTTGCTTGTGATAATGTGGTCATTTGGCACTTCGAGAAGTCTGGTATATATTCAGTGAAGAGCGGGTATCGTTTAGGCCAGGGGCCATCGTTGGCCCAAAGCCCTTCATCCTCGTCTTCTGAGTTAATACATAGATGGTGGACTACCTGTTGGAATATGAAGTTACCTAGCAAGATTAAAATCTTCTTCTGGAGACTGTATTTAGATCGGCTGCCCACGATGGATAACTTGTTTAGGCGGAGAATAGACTCACTGAATATATGTGTGTGCTGCGGTAGGATGGGGGAGTCGAGCCTCCACTTGTTTTGGCATTGTAAACATACGAGGGAGATTATGTGGTCTGCAGGTTTTGGGGCTATCTTGTCCAGGTGCAAGGCAGACGATATTAAGTTCCTCCTCCGAGATGTAAAGAATGAGCTGGAATGGGACTGGTTTGAGGAGTGGGTGGTGTTATTATGGGCGATCTGGTTCAGGCGGAATGAAATGAGGCAGAAGAAGAAGGTCTCGACTGCGAATCTGGCAGATTGAGTTGTTGGGTACCTGAACGCTTTCCGTGACTCGAATAAGAGGGGGATGGACCTGTTGGTGGGAAGACCAAATCGGGCTGTCTGCAGGTGGGCGCGCCGGAGTTTGATGGGTTTAAAGTGAATGTTGATGCGGCCTTTTATCTGGAGAGCGGAGAGGCGGGTGTAGGCGTGGTATGCCGTGATTCTTGGGGGCAGGTGAGCTTCACAGCTTCTGTTTTCCATGAGAATATTAGAGATGCGGACTTTGCAGAAGGGCTGGCGGCTTCCTTCAGTTTGAGGCTTACGGTGGAGACGGCTACCAGACCTTTTGTGCTAGAGACAGATTCTATGCGGGTGTCTAAGCTTTTGCAGCGTGATGTGGAGGAGGTGTTGGAGTTGGGGATGCTGGTGGAGGATGCGGTGAGGGGCGTTCCAGCGAGGTGGTTGGTAGGCGGCAACTTTACGTTCAGGGAAGGCAATCGGGTTGCCCATCGTTTGGCAAGGTTGGCAATGGAGGACAGGTGTGACCGAGTATGGATGGAAGAAGGCCCTTCATGTGTTTTGAGCTTGTTGGCTGAAGATGGAGTGCATGAGTTTCCTCAGGCGAGGCAGGAAAGGTGA
mRNA sequence
ATGACGTTACAACCTGACGCTAGAGTTAGGGATTTGTTCACCGCATCAGGGCAATGGAATGAGGTTCTTATCCGACAACACTTTAGCCAGCAGGAGGTAAGATATATTCTCTCCATTCCTCTACGTCGTTTTGCTTGTGATAATGTGGTCATTTGGCACTTCGAGAAGTCTGGTATATATTCAGTGAAGAGCGGGTATCGTTTAGGCCAGGGGCCATCGTTGGCCCAAAGCCCTTCATCCTCGTCTTCTGAGTTAATACATAGATGGTGGACTACCTGTTGGAATATGAAGTTACCTAGCAAGATTAAAATCTTCTTCTGGAGACTGTATTTAGATCGGCTGCCCACGATGGATAACTTGTTTAGGCGGAGAATAGACTCACTGAATATATGTGTGTGCTGCGGTAGGATGGGGGAGTCGAGCCTCCACTTGTTTTGGCATTGTAAACATACGAGGGAGATTATGTGGTCTGCAGGTTTTGGGGCTATCTTGTCCAGGTGCAAGGCAGACGATATTAAGTTCCTCCTCCGAGATGTAAAGAATGAGCTGGAATGGGACTGGTTTGAGGAGTGGGTGGTGTTATTATGGGCGATCTGGTTCAGGCGGAATGAAATGAGGCAGAAGAAGAAGGTGGGCGCGCCGGAGTTTGATGGGTTTAAAGTGAATGTTGATGCGGCCTTTTATCTGGAGAGCGGAGAGGCGGGTGTAGGCGTGGTATGCCGTGATTCTTGGGGGCAGGTGAGCTTCACAGCTTCTGTTTTCCATGAGAATATTAGAGATGCGGACTTTGCAGAAGGGCTGGCGGCTTCCTTCAGTTTGAGGCTTACGGTGGAGACGGCTACCAGACCTTTTGTGCTAGAGACAGATTCTATGCGGGTGTCTAAGCTTTTGCAGCGTGATGTGGAGGAGGTGTTGGAGTTGGGGATGCTGGTGGAGGATGCGGTGAGGGGCGTTCCAGCGAGGTGGTTGGTAGGCGGCAACTTTACGTTCAGGGAAGGCAATCGGGTTGCCCATCGTTTGGCAAGGTTGGCAATGGAGGACAGGTGTGACCGAGTATGGATGGAAGAAGGCCCTTCATGTGTTTTGAGCTTGTTGGCTGAAGATGGAGTGCATGAGTTTCCTCAGGCGAGGCAGGAAAGGTGA
Coding sequence (CDS)
ATGACGTTACAACCTGACGCTAGAGTTAGGGATTTGTTCACCGCATCAGGGCAATGGAATGAGGTTCTTATCCGACAACACTTTAGCCAGCAGGAGGTAAGATATATTCTCTCCATTCCTCTACGTCGTTTTGCTTGTGATAATGTGGTCATTTGGCACTTCGAGAAGTCTGGTATATATTCAGTGAAGAGCGGGTATCGTTTAGGCCAGGGGCCATCGTTGGCCCAAAGCCCTTCATCCTCGTCTTCTGAGTTAATACATAGATGGTGGACTACCTGTTGGAATATGAAGTTACCTAGCAAGATTAAAATCTTCTTCTGGAGACTGTATTTAGATCGGCTGCCCACGATGGATAACTTGTTTAGGCGGAGAATAGACTCACTGAATATATGTGTGTGCTGCGGTAGGATGGGGGAGTCGAGCCTCCACTTGTTTTGGCATTGTAAACATACGAGGGAGATTATGTGGTCTGCAGGTTTTGGGGCTATCTTGTCCAGGTGCAAGGCAGACGATATTAAGTTCCTCCTCCGAGATGTAAAGAATGAGCTGGAATGGGACTGGTTTGAGGAGTGGGTGGTGTTATTATGGGCGATCTGGTTCAGGCGGAATGAAATGAGGCAGAAGAAGAAGGTGGGCGCGCCGGAGTTTGATGGGTTTAAAGTGAATGTTGATGCGGCCTTTTATCTGGAGAGCGGAGAGGCGGGTGTAGGCGTGGTATGCCGTGATTCTTGGGGGCAGGTGAGCTTCACAGCTTCTGTTTTCCATGAGAATATTAGAGATGCGGACTTTGCAGAAGGGCTGGCGGCTTCCTTCAGTTTGAGGCTTACGGTGGAGACGGCTACCAGACCTTTTGTGCTAGAGACAGATTCTATGCGGGTGTCTAAGCTTTTGCAGCGTGATGTGGAGGAGGTGTTGGAGTTGGGGATGCTGGTGGAGGATGCGGTGAGGGGCGTTCCAGCGAGGTGGTTGGTAGGCGGCAACTTTACGTTCAGGGAAGGCAATCGGGTTGCCCATCGTTTGGCAAGGTTGGCAATGGAGGACAGGTGTGACCGAGTATGGATGGAAGAAGGCCCTTCATGTGTTTTGAGCTTGTTGGCTGAAGATGGAGTGCATGAGTTTCCTCAGGCGAGGCAGGAAAGGTGA
Protein sequence
MTLQPDARVRDLFTASGQWNEVLIRQHFSQQEVRYILSIPLRRFACDNVVIWHFEKSGIYSVKSGYRLGQGPSLAQSPSSSSSELIHRWWTTCWNMKLPSKIKIFFWRLYLDRLPTMDNLFRRRIDSLNICVCCGRMGESSLHLFWHCKHTREIMWSAGFGAILSRCKADDIKFLLRDVKNELEWDWFEEWVVLLWAIWFRRNEMRQKKKVGAPEFDGFKVNVDAAFYLESGEAGVGVVCRDSWGQVSFTASVFHENIRDADFAEGLAASFSLRLTVETATRPFVLETDSMRVSKLLQRDVEEVLELGMLVEDAVRGVPARWLVGGNFTFREGNRVAHRLARLAMEDRCDRVWMEEGPSCVLSLLAEDGVHEFPQARQER
Homology
BLAST of Lcy03g006960 vs. ExPASy TrEMBL
Match:
A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)
HSP 1 Score: 211.1 bits (536), Expect = 8.2e-51
Identity = 132/398 (33.17%), Postives = 192/398 (48.24%), Query Frame = 0
Query: 17 GQWNEVLIRQHFSQQEVRYILSIPLRRFACDNVVIWHFEKSGIYSVKSGYRLG-QGPSLA 76
G W ++R F+ E + ILSIP+ R A ++ +IW++EK+G+YSV+SGY++
Sbjct: 762 GGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCV 821
Query: 77 QSPSSSSSELIHRWWTTCWNMKLPSKIKIFFWRLYLDRLPTMDNLFRRRIDSLNICVCCG 136
Q+PSSSSSE + WW W M +P+KIK+F WRL LDRLPT NL +R ++ N C CG
Sbjct: 822 QAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCG 881
Query: 137 RMGESSLHLFWHCKHTREIMWSAGFGAILSRCKADDIKFLLRDVKNELEWDWFEEWVVLL 196
R GE S+HLFW CK + ++ FG + +LR+ L FEE V++
Sbjct: 882 RNGEDSIHLFWICKFAEALWINSKFGKL-------SPFLILRESHESLSKADFEELCVVI 941
Query: 197 WAIWFRRN---------------------------EMRQKKK-------------VGAPE 256
W +W +RN E R+ K + P
Sbjct: 942 WGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREAKSNPITGRVTNTAEILWQPP 1001
Query: 257 FDG-FKVNVDAAFYLESGEAGVGVVCRDSWGQVSFTASVFHENIRDADFAEGLAASFSLR 316
+G +K+N DA+F AG+G++ + GQV A+ + ENI+ D AE +AA L+
Sbjct: 1002 DEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQ 1061
Query: 317 LTVETATRPFVLETDSMRVSKLLQRDVEEVLELGMLVEDAVRGVPARWLVGGNFTFREGN 373
L E P +E++ E G +V A NF REGN
Sbjct: 1062 LASEIGMHP----------------ALEDLSETGEIVLKAKNFWTQSLHASFNFVKREGN 1121
BLAST of Lcy03g006960 vs. ExPASy TrEMBL
Match:
A0A803PAX6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 181.4 bits (459), Expect = 7.0e-42
Identity = 106/392 (27.04%), Postives = 192/392 (48.98%), Query Frame = 0
Query: 16 SGQWNEVLIRQHFSQQEVRYILSI-PLRRFACDNVVIWHFEKSGIYSVKSGYRLGQGPSL 75
+G+W LI++ F ++ IL + P ++ + D+ +IWHF G+Y+V+SGY + + +
Sbjct: 935 NGEWKLDLIKESFHNDDIPIILGMAPCKKHSNDD-LIWHFTSDGLYTVRSGYEVAEIDNY 994
Query: 76 AQSPSSSSSELIHRWWTTCWNMKLPSKIKIFFWRLYLDRLPTMDNLFRRRIDSLNICVCC 135
PSS ++ +WWT+ W ++ P KI+ F WR+ +P L RR ++ C C
Sbjct: 995 KAGPSSEAT--TRKWWTSIWKIEAPPKIRNFLWRVCNGWIPVNTILQRRGMNINTSCYWC 1054
Query: 136 GRMGESSLHLFWHCKHTREIMWSAGFGAILSRCKADDIKFLLRDVKNELEWDWFEEWVVL 195
G+ E+ H W C ++++I + +L + K I L+ +++N++ + F ++++
Sbjct: 1055 GQAEETIEHCLWFCPYSKQIWKKYPWWKVLKQSKGTIIDILI-NIRNQVAKEEFNFFIIM 1114
Query: 196 LWAIWFRRNE------------------------MRQKKKVGA--------------PEF 255
W IW RRN+ M Q K+ + P
Sbjct: 1115 SWLIWNRRNKKRLNHFMSSQESWLKWAQMEVDYIMHQDPKLESHNLTKPLKHLGWEPPPV 1174
Query: 256 DGFKVNVDAAFYLESGEAGVGVVCRDSWGQVSFTASVFHENIRDADFAEGLAASFSLRLT 315
+ F +N DA+ + E G+GVV R + G+V+ A+ + + AE LA + L
Sbjct: 1175 NIFCINSDASVHYTEAEIGLGVVIRTNKGEVTAAATQHVNGVFSIELAEALAIQMGISLA 1234
Query: 316 VETATRPFVLETDSMRVSKLLQRDVEEVLELGMLVEDAVRGVPARWLVGGNFTFREGNRV 369
V+T+ PF++++D +RV + ++ + + G L+ D V + T R NRV
Sbjct: 1235 VQTSAIPFIIQSDCLRVIEYIKGKFQAKTDWGALL-DEVSDPAFVHCQAASHTSRNNNRV 1294
BLAST of Lcy03g006960 vs. ExPASy TrEMBL
Match:
A0A2N9HE46 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37832 PE=4 SV=1)
HSP 1 Score: 181.4 bits (459), Expect = 7.0e-42
Identity = 115/396 (29.04%), Postives = 180/396 (45.45%), Query Frame = 0
Query: 16 SGQWNEVLIRQHFSQQEVRYILSIPLRRFACDNVVIWHFEKSGIYSVKSGYRLGQGPSLA 75
S WNE ++ F E IL IPL +++ D+ +IW K+G Y+V+SGY L S +
Sbjct: 1293 SNTWNEDIVTATFLPFEADIILKIPLSQYSYDDTLIWGGTKNGAYAVRSGYHLLLHESHS 1352
Query: 76 QSPSSSSSELIHRWWTTCWNMKLPSKIKIFFWRLYLDRLPTMDNLFRRRIDSLNICVCCG 135
P S++ L+ W T W++K+P K++ F WR + LPT NL RR I +C+ C
Sbjct: 1353 AEPGPSNTSLLTNVWNTIWSLKVPPKVRHFLWRASHESLPTRQNLHRRHILDDPVCITCN 1412
Query: 136 RMGESSLHLFWHCKHTREIMWSAGFGAILSRCKADDIKFLLRDVKNELEWDWFEEWVVLL 195
E+ +H+ W C ++ + S + L+R D + LL + L + + +L
Sbjct: 1413 SEPETIIHILWLCSTSQNVWQSVLWSHKLTRDTYSDFQELLLNCVQNLTLPELQLFAMLS 1472
Query: 196 WAIWFRRNEMRQKKKVGA------------------------------------------ 255
W++W+RRN +R K V A
Sbjct: 1473 WSLWYRRNCVRLNKPVEAITSLLPRTKELLQEYIQVQESPSPTQKQVIPQLQSRGSVCWR 1532
Query: 256 -PEFDGFKVNVDAAFYLESGEAGVGVVCRDSWGQVSFTASVFHENIRDADFAEGLAASFS 315
PE K+N D A + E GEAGVGV+ R+S G V + S + E +AA +
Sbjct: 1533 PPEMGRVKINYDGAVFTEMGEAGVGVIIRNSQGVVMASLSQRILFPHSVEAVEAIAARAA 1592
Query: 316 LRLTVETATRPFVLETDSMRVSKLLQRDVEEVLELGMLVEDAVRGVPARWLVGGNFTFRE 369
++L ++ + LE DS+ + K L + G ++ D V RE
Sbjct: 1593 VQLALDLGFQDVELEGDSINIVKALSQTETNYTLYGHIINDTKLVSQRLASVKFMHVNRE 1652
BLAST of Lcy03g006960 vs. ExPASy TrEMBL
Match:
A0A2N9FBQ4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12524 PE=4 SV=1)
HSP 1 Score: 181.4 bits (459), Expect = 7.0e-42
Identity = 115/396 (29.04%), Postives = 180/396 (45.45%), Query Frame = 0
Query: 16 SGQWNEVLIRQHFSQQEVRYILSIPLRRFACDNVVIWHFEKSGIYSVKSGYRLGQGPSLA 75
S WNE ++ F E IL IPL +++ D+ +IW K+G Y+V+SGY L S +
Sbjct: 1066 SNTWNEDIVTATFLPFEADIILKIPLSQYSYDDTLIWGGTKNGAYAVRSGYHLLLHESHS 1125
Query: 76 QSPSSSSSELIHRWWTTCWNMKLPSKIKIFFWRLYLDRLPTMDNLFRRRIDSLNICVCCG 135
P S++ L+ W T W++K+P K++ F WR + LPT NL RR I +C+ C
Sbjct: 1126 AEPGPSNTSLLTNVWNTIWSLKVPPKVRHFLWRASHESLPTRQNLHRRHILDDPVCITCN 1185
Query: 136 RMGESSLHLFWHCKHTREIMWSAGFGAILSRCKADDIKFLLRDVKNELEWDWFEEWVVLL 195
E+ +H+ W C ++ + S + L+R D + LL + L + + +L
Sbjct: 1186 SEPETIIHILWLCSTSQNVWQSVLWSHKLTRDTYSDFQELLLNCVQNLTLPELQLFAMLS 1245
Query: 196 WAIWFRRNEMRQKKKVGA------------------------------------------ 255
W++W+RRN +R K V A
Sbjct: 1246 WSLWYRRNCVRLNKPVEAITSLLPRTKELLQEYIQVQESPSPTQKQVIPQLQSRGSVCWR 1305
Query: 256 -PEFDGFKVNVDAAFYLESGEAGVGVVCRDSWGQVSFTASVFHENIRDADFAEGLAASFS 315
PE K+N D A + E GEAGVGV+ R+S G V + S + E +AA +
Sbjct: 1306 PPEMGRVKINYDGAVFTEMGEAGVGVIIRNSQGVVMASLSQRILFPHSVEAVEAIAARAA 1365
Query: 316 LRLTVETATRPFVLETDSMRVSKLLQRDVEEVLELGMLVEDAVRGVPARWLVGGNFTFRE 369
++L ++ + LE DS+ + K L + G ++ D V RE
Sbjct: 1366 VQLALDLGFQDVELEGDSINIVKALSQTETNYTLYGHIINDTKLVSQRLASVKFMHVNRE 1425
BLAST of Lcy03g006960 vs. ExPASy TrEMBL
Match:
A0A803P3X4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)
HSP 1 Score: 179.1 bits (453), Expect = 3.5e-41
Identity = 118/407 (28.99%), Postives = 188/407 (46.19%), Query Frame = 0
Query: 9 VRDLFTASGQWNEVLIRQHFSQQEVRYILSIPLRRFACDNVVIWHFEKSGIYSVKSGYRL 68
V DL +G+W+E +R F+ + IL +P + ++ V+WH+ K G YSV+SGYR+
Sbjct: 1385 VIDLKKINGEWDEEFVRAVFNPTDADLILRMPTSEWDIEDKVLWHYSKDGEYSVRSGYRM 1444
Query: 69 GQGPSLAQSPSSSSSELIHRWWTTCWNMKLPSKIKIFFWRLYLDRLPTMDNLFRRRIDSL 128
+L S +E+ +WW W +K+P K+K F W+L LPT L RR I
Sbjct: 1445 --AAALQVRDVQSDTEVTEKWWRLLWKLKIPPKVKHFVWKLAHSWLPTNAVLARRNIPVE 1504
Query: 129 NIC-VCCGRMGESSLHLFWHCKHTREIMWSAGFGAILSRCKADDIKFLLRDVKNELEWDW 188
C C + E H W C+ RE+ S GF + R ++D+ L + L +
Sbjct: 1505 PYCNRCFNGVYEDVFHAIWCCRVNREVWKSTGFYGKIQRQGSEDVLAFLMRISTILSKEE 1564
Query: 189 FEEWVVLLWAIWFRRN-----------------------------------EMRQKKKVG 248
FE ++VL W +W+ RN ++R+ +
Sbjct: 1565 FEFFLVLSWNLWYVRNSVNHGGHKPQACAILEWCSKFLSEFRESNTPKRDRQVREAARWT 1624
Query: 249 APEFDGFKVNVDAAFYLESGEAGVGVVCRDSWGQV-SFTASVFHENIRDADFAEGLAASF 308
P D FK+NVDA E+G A + V RD G V S A+V +N+ AE A +
Sbjct: 1625 PPGIDAFKINVDAGVRTEAGVASISSVVRDHAGMVHSAAATVLLQNMTPL-HAELQAIAR 1684
Query: 309 SLRLTVETATRPFVLETDSMRVSKLLQRDVE---EVLELGMLVEDAVRGVPARWLVGGNF 368
L+ ++ F +E+D ++ L+QR E +V E+ + ++ V R G +F
Sbjct: 1685 GLQAGIQCNLPAFNVESDCLQAVTLVQRKEEGCRDVDEIVAHIRSLLQNVRVR---GVSF 1744
Query: 369 TFREGNRVAHRLARLAMEDRCDRVWMEEGPSCVLSLLAEDGVHEFPQ 376
+RE N+VAH LA A+ ++ +W+ P C + D + P+
Sbjct: 1745 VYREANKVAHILANEALLNKASALWIGVVPPCASQAVMNDSPNPLPR 1785
BLAST of Lcy03g006960 vs. NCBI nr
Match:
XP_022150918.1 (uncharacterized protein LOC111018954 [Momordica charantia])
HSP 1 Score: 211.1 bits (536), Expect = 1.7e-50
Identity = 132/398 (33.17%), Postives = 192/398 (48.24%), Query Frame = 0
Query: 17 GQWNEVLIRQHFSQQEVRYILSIPLRRFACDNVVIWHFEKSGIYSVKSGYRLG-QGPSLA 76
G W ++R F+ E + ILSIP+ R A ++ +IW++EK+G+YSV+SGY++
Sbjct: 762 GGWQGDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCV 821
Query: 77 QSPSSSSSELIHRWWTTCWNMKLPSKIKIFFWRLYLDRLPTMDNLFRRRIDSLNICVCCG 136
Q+PSSSSSE + WW W M +P+KIK+F WRL LDRLPT NL +R ++ N C CG
Sbjct: 822 QAPSSSSSEEVRCWWNGFWKMHIPNKIKVFLWRLCLDRLPTGCNLSKRGVEITNCCYFCG 881
Query: 137 RMGESSLHLFWHCKHTREIMWSAGFGAILSRCKADDIKFLLRDVKNELEWDWFEEWVVLL 196
R GE S+HLFW CK + ++ FG + +LR+ L FEE V++
Sbjct: 882 RNGEDSIHLFWICKFAEALWINSKFGKL-------SPFLILRESHESLSKADFEELCVVI 941
Query: 197 WAIWFRRN---------------------------EMRQKKK-------------VGAPE 256
W +W +RN E R+ K + P
Sbjct: 942 WGLWNQRNARAFNDSTKTVFKIGMELVEWANKYAMEFREAKSNPITGRVTNTAEILWQPP 1001
Query: 257 FDG-FKVNVDAAFYLESGEAGVGVVCRDSWGQVSFTASVFHENIRDADFAEGLAASFSLR 316
+G +K+N DA+F AG+G++ + GQV A+ + ENI+ D AE +AA L+
Sbjct: 1002 DEGIYKINTDASFLASDQHAGLGIIIHNDRGQVMAAATKYLENIQSVDMAEAIAAVEGLQ 1061
Query: 317 LTVETATRPFVLETDSMRVSKLLQRDVEEVLELGMLVEDAVRGVPARWLVGGNFTFREGN 373
L E P +E++ E G +V A NF REGN
Sbjct: 1062 LASEIGMHP----------------ALEDLSETGEIVLKAKNFWTQSLHASFNFVKREGN 1121
BLAST of Lcy03g006960 vs. NCBI nr
Match:
TXG66198.1 (hypothetical protein EZV62_007473 [Acer yangbiense])
HSP 1 Score: 174.9 bits (442), Expect = 1.4e-39
Identity = 109/376 (28.99%), Postives = 172/376 (45.74%), Query Frame = 0
Query: 4 QPDARVRDLFTASGQWNEVLIRQHFSQQEVRYILSIPLRRFACDNVVIWHFEKSGIYSVK 63
Q +A V DL G+WN L+ F + IL++P D+ + WHF+K G YSV+
Sbjct: 100 QENALVSDLSLPYGEWNSDLVHNTFRPDDATLILNLPRLSPNRDDTLCWHFDKRGFYSVR 159
Query: 64 SGYRLGQGPSLAQSPSSSSSELIHRWWTTCWNMKLPSKIKIFFWRLYLDRLPTMDNLFRR 123
SGY++ G + SS + WW W +P+K KIFFW+ + LPT L R
Sbjct: 160 SGYKMALG---LNERTGYSSLQLSSWWHFLWECNVPNKCKIFFWKAFHGWLPTFATLSRC 219
Query: 124 RIDSLNICVCCGRMGESSLHLFWHCKHTREIMWSAGFG-AILSRCKADDIKFLLRDVKNE 183
R+D ++ C+ C E+ H+ W+C+ + W G +L R D ++ + +
Sbjct: 220 RVDVMDCCILCCAASETITHILWYCQLAVD-GWRMLLGEEVLQRISVSDFSDIVMCLCST 279
Query: 184 LEWDWFEEWVVLLWAIWFRRNEMRQKKKVGA--------PEFDGFKVNVDAAFYLESGEA 243
+ D F +++ W +W RN + A P+ DGFK+N A+F L SG+A
Sbjct: 280 INNDLFNLFILGYWRLWTNRNCVIHGSVGWAAANTIWKPPKLDGFKINCYASFRLRSGKA 339
Query: 244 GVGVVCRDSWGQVSFTASVFHENIRDADFAEGLAASFSLRLTVETATRPFVLETDSMRVS 303
GV V+ D G S + E A L+L ++ VLE+D+ V
Sbjct: 340 GVSVIIPDYKGTAIVVKSSPVLGCNSVEMLEAQACLVGLQLAIDVGISSVVLESDTDGVI 399
Query: 304 KLLQRDVEEVLELGMLVEDAVRGVPARWLVGGNFTFREGNRVAHRLARLAMEDRCDRVWM 363
LL V ++G ++ ++ + L+ R N VAH L LA VW+
Sbjct: 400 HLLFDHVVPHTKMGAIIRSSLALGASMNLLSIEAIHRGANSVAHNLTDLAFSLDGPVVWL 459
Query: 364 EEGPSCVLSLLAEDGV 371
++ PS + L+ D +
Sbjct: 460 DDLPSDIARLVHLDSI 471
BLAST of Lcy03g006960 vs. NCBI nr
Match:
XP_023925698.1 (uncharacterized protein LOC112037116 [Quercus suber])
HSP 1 Score: 171.8 bits (434), Expect = 1.1e-38
Identity = 107/355 (30.14%), Postives = 175/355 (49.30%), Query Frame = 0
Query: 19 WNEVLIRQHFSQQEVRYILSIPLRRFACDNVVIWHFEKSGIYSVKSGYRLGQGPSLAQSP 78
WN I Q+F+ ++ IL +PL R + + W KSG Y+V+SGY++ +
Sbjct: 522 WNRDFIMQNFNHEDAEAILRVPLSRRYISDSLFWTVNKSGEYTVRSGYQVARKLQKEADW 581
Query: 79 SSSSSELIHRW-WTTCWNMKLPSKIKIFFWRLYLDRLPTMDNLFRRRIDSLNICVCCGRM 138
+ SS+ ++ W T W +K+P+KIK+F WR + LPT NL +RR+ N C C
Sbjct: 582 AESSNGVVGGLVWRTLWKLKVPNKIKVFGWRACRNILPTRVNLVQRRVIQDNKCEACKIE 641
Query: 139 GESSLHLFWHCKHTREIMWSAGFGAILSRCKAD--DIKFLLRDVKNELEWDWFEEWVVLL 198
E+ +H W+C R++ W AG+ A + +C D D+ L+ ++ N L + E+++V
Sbjct: 642 AETGIHALWNCGVARDV-W-AGYTARVQKCSGDQADMLQLMEEMINRLSTEELEQFLVQS 701
Query: 199 WAIWFRRNEMRQKKKVGAPEFDGFKVNVDAAFYLESGEAGVGVVCRDSWGQVSFTASVFH 258
W IW +RN + KK+ APE E G +G+G + R+ G+V + S
Sbjct: 702 WIIWNQRNGLIHGKKLQAPE--------------EDGTSGIGAIIRNDRGEVMASLSAKG 761
Query: 259 ENIRDADFAEGLAASFSLRLTVETATRPFVLETDSMRVSKLLQRDVEEVLELGMLVEDAV 318
+ ++ AE LA ++ +E VLE D+ + L V LG +++D +
Sbjct: 762 PPVTCSEDAEILACRRAVNFAMECGFSELVLEGDNQAIMTALSSRRGLVSRLGHIIQDVI 821
Query: 319 RGVPARWLVGGNFTFREGNRVAHRLARLAMEDRCDRVWMEEGPSCVLSLLAEDGV 371
+ + F R N AH LAR A + D VW+E+ P V+ + D +
Sbjct: 822 CMLNSLRWSQVLFAKRSANTAAHALARYAKDLIEDVVWIEDSPPPVVEAMYLDSI 860
BLAST of Lcy03g006960 vs. NCBI nr
Match:
XP_006487889.1 (uncharacterized protein LOC102617714 [Citrus sinensis])
HSP 1 Score: 171.4 bits (433), Expect = 1.5e-38
Identity = 115/402 (28.61%), Postives = 174/402 (43.28%), Query Frame = 0
Query: 2 TLQPDARVRDLFTASGQWNEVLIRQHFSQQEVRYILSIPLRRFACDNVVIWHFEKSGIYS 61
TL V DL + W + +I QHF +++ I+ I L + + +WH++K G YS
Sbjct: 833 TLDIQPVVADLIDENQNWKKEMIYQHFMKEDAAMIVRIQLPKTPKPDQYLWHYDKYGQYS 892
Query: 62 VKSGYRLGQGPSLAQSPSSSSSELIHRWWTTCWNMKLPSKIKIFFWRLYLDRLPTMDNLF 121
VKSGY++ SP SS S L W W +LP KIKIF WR + LPT NL+
Sbjct: 893 VKSGYQIALKLKCPNSPCSSDSSLSQ--WNVIWAAELPEKIKIFMWRAVKNLLPTASNLW 952
Query: 122 RRRIDSLNICVCCGRMGESSLHLFWHCKHTREIMWSAGFGAILSRCKADDIKFLLRDVKN 181
RR+I IC CG E +H CK +++ +AG + + D+ +L +++
Sbjct: 953 RRKIVGSPICRRCGVKNEDVIHALLDCKVAKKVWRNAGCAEEIEKLVQQDLMAVLVEIQR 1012
Query: 182 ELEWDWFEEWVVLLWAIWFRRN-------------------------------------- 241
+ E VVL W IW+ +N
Sbjct: 1013 KKGKKELELIVVLCWTIWYSQNLFIFENKREDSQLSIARAEANMDSFKRIKKPFSKILEK 1072
Query: 242 EMRQKKKVGAPEFDG-FKVNVDAAFYLESGEAGVGVVCRDSWGQVSFTASVFHENIRDAD 301
+ R +K+V P G FK+NVDAA ++ AG+GV+ R+S G+V A +
Sbjct: 1073 QQRNRKQVWNPPPSGWFKINVDAAVNVKDQIAGLGVIIRNSNGEVVAAAIQRSFFQLSST 1132
Query: 302 FAEGLAASFSLRLTVETATRPFVLETDSMRVSKLLQRDVEEVLELGMLVEDAVRGVPARW 361
E A ++ P ++ETDS V L ++E ++ D + +
Sbjct: 1133 HMEAEAVILGIKSAQRAGFSPMIIETDSQEVVDLTLSKKVRIIETSWIIADIQESIQSSN 1192
Query: 362 LVGGNFTFREGNRVAHRLARLAMEDRCDRVWMEEGPSCVLSL 365
+T RE N AH LA+ A+E W P ++SL
Sbjct: 1193 QFSIQYTPRECNVTAHDLAKKALEFENSVFWEGSFPPQIVSL 1232
BLAST of Lcy03g006960 vs. NCBI nr
Match:
TXG50387.1 (hypothetical protein EZV62_022911 [Acer yangbiense])
HSP 1 Score: 170.2 bits (430), Expect = 3.3e-38
Identity = 112/395 (28.35%), Postives = 171/395 (43.29%), Query Frame = 0
Query: 9 VRDLFTASGQWNEVLIRQHFSQQEVRYILSIPLRRFACDNVVIWHFEKSGIYSVKSGYRL 68
V +L SG WN LIR F + ILS+P A D+ + WHF+K G Y+V+SGY++
Sbjct: 39 VSELCHPSGAWNSELIRNSFLPDDASLILSLPRLSPAQDDSLCWHFDKRGFYTVRSGYKV 98
Query: 69 GQGPSLAQSPSSSSSELIHRWWTTCWNMKLPSKIKIFFWRLYLDRLPTMDNLFRRRIDSL 128
L + SSS +L WW W +P+K KIFFW+ + LPT L RRR+D +
Sbjct: 99 AL--DLKKGIGSSSMQL-SPWWRFLWKCNIPNKCKIFFWKAFNGWLPTFATLARRRVDVV 158
Query: 129 NICVCCGRMGESSLHLFWHCKHTREIMWSAGFGAILSRCKADDIKFLLRDVKNELEWDWF 188
+ C C ES H+ W C E+ ++ R D ++ + ++ F
Sbjct: 159 DYCQVCNDDSESITHILWSCNSAVEVWRQLLGDDVIQRIVVSDFPSIILSLWRSVDSVVF 218
Query: 189 EEWVVLLWAIWFRR-----------------------------NEMRQKKKVG------A 248
++ W +W R NE+ K+ +
Sbjct: 219 NLLIIGYWRLWTNRNSVVHGSAGWAAADMVTWIDNFANEFRLANELNHKEVLSHQPSWKT 278
Query: 249 PEFDGFKVNVDAAFYLESGEAGVGVVCRDSWGQVSFTASVFHENIRDADFAEGLAASFSL 308
P+ FK+N DA+F L SG+AGVGV+ RD G S + E A +
Sbjct: 279 PKRGEFKINCDASFQLRSGKAGVGVIIRDYKGSAIAARSSPVLCCSSVEMLEAQACLEGI 338
Query: 309 RLTVETATRPFVLETDSMRVSKLLQRDVEEVLELGMLVEDAVRGVPARWLVGGNFTFREG 368
L ++ ++E+D+ V +LL ELG ++ ++ + L+ RE
Sbjct: 339 HLAIDIGVSGVIIESDAASVIQLLSDQTVPRTELGAIIHTSLALGASVNLLSYVAVRREA 398
BLAST of Lcy03g006960 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 68.9 bits (167), Expect = 9.7e-12
Identity = 54/209 (25.84%), Postives = 91/209 (43.54%), Query Frame = 0
Query: 9 VRDLFTASGQ---WNEVLIRQHFSQQEVRYILSIPLRRFACDNVVIWHFEKSGIYSVKSG 68
+ +LF G W++ I Q Q + +I I L + + +IW++ +G Y+V+SG
Sbjct: 75 INNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSG 134
Query: 69 Y-RLGQGPSL---AQSPSSSSSELIHRWWTTCWNMKLPSKIKIFFWRLYLDRLPTMDNLF 128
Y L PS A +P S +L T WN+ + K+K F WR L T + L
Sbjct: 135 YWLLTHDPSTNIPAINPPHGSIDL----KTRIWNLPIMPKLKHFLWRALSQALATTERLT 194
Query: 129 RRRIDSLNICVCCGRMGESSLHLFWHCKHTREIMWSAGFGAILSRCKADDIKFLLRDVKN 188
R + C C R ES H + C + I ++ ++D + + ++ N
Sbjct: 195 TRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILN 254
Query: 189 ELEWDWFEEW-----VVLLWAIWFRRNEM 206
++ ++ V L+W IW RN +
Sbjct: 255 FVQDTTMSDFHKLLPVWLIWRIWKARNNV 279
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DAR4 | 8.2e-51 | 33.17 | uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... | [more] |
A0A803PAX6 | 7.0e-42 | 27.04 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
A0A2N9HE46 | 7.0e-42 | 29.04 | Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS37832 PE=4 SV=1 | [more] |
A0A2N9FBQ4 | 7.0e-42 | 29.04 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A803P3X4 | 3.5e-41 | 28.99 | Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
AT3G09510.1 | 9.7e-12 | 25.84 | Ribonuclease H-like superfamily protein | [more] |